IVF0000234 (gene) Melon (IVF77) v1

Overview


Name	IVF0000234
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	Ras-related protein Rab-1A
Location	chr06: 17641716 .. 17644785 (+)
RNA-Seq Expression	IVF0000234
Synteny	IVF0000234

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTATGTTAATACTTCAATTCTCTTCTTCATTTCTTCTTTTACCTCTATTTCCCTTCTTCAATCCAACTCCTCCCATATCTTATTTCTTCTTTATGTTTTCCCCCTTTTGTAGTGATTATTTGTTCAAGCTCTTGCTAATCGGCGACTCTTCCGTCGGAAAATCTTGCCTTCTTCTCAGATTTGCGGTACAACCTTTGATTTCTGCCGTCCTTTTTTTTTTTTTTTGTTAATTTCATCTCTTTATGTCTCGGATTGTGGAAATGGGTGATGATTTAGGGCTTTCTCTAGTGTTTTTTAGGGGGTTATCTTCATCAGTACAACATAAAGCTATCTTTTTTTCTTTTTCTTTCAGGATGATTCTTATGTGGATAGCTATATAAGTACAATTGGAGTTGATTTCGTGAGTCTTGAAACCGTTTACATATAAAGCTTTTGTGTGCCATTGCCATTGCTTGTGGATTTTACTACTTATGGGTAATCTTCTGTGTTTTTTCTTTTTCTTTTTCCAGAAAATCAGAACTGTGGAACTGGATGGAAAGACCATTAAGCTCCAGATTGTGAGTGGGCTTGCATAGTTTCTTGTTTTTATAAAATTTTCTTTCTTATTCATACTGGACATATATTTTTGGCTTTTTGCTGCGTGATTGAGCATTTAAATGGCCTTGGGAGAGCTTATTCATAGGGGAAATAAACGTATGTCTGCATGTATGATAATGTAGCCTGCCGTTACTTTCTTGTGCTCTGGCTAAAAAGTAAGCCTTTTTGTATCAGAAAGGCCAAAATATGGTGTGGTTTCTATTAAATTTCAGAAAACATCCATCATTTTGGTACGAATCAGATGCTTTACTTAGGTTGTGATGATGCTGTATTTTCAGCTTCAATCATATTTTACATGCCTGATTCCATCTTCTATGCTAGTCCATCTGACATAAAAGCTGTTGTCATCATTAAAAGACTAACAGGAAACGGTGGATAATGTTGCTGTGCAAATTGTTGGAGACATGAAAGTGAATGTGTAGTAACCTTTACATTTAGTGTTGACTGTCTAATTCATTCTTCTGTCTTCCTTTTTTTACTAAAGCTGTATTCCTCATCTTTTCAAGGACTTGTCAAAACCTAATTTGGCACACAGAAGTTTGGACTGATTCTATTGTTTTATTTCTTTTAGTGGGACACTGCTGGTCAGGAGAGATTCAGGACTATAACAAGTAGCTATTACAGAGGTGCACATGGAATAATTGTAAGAATCTTCCCTATCAAGTTAAGGGATCAAAATTTTGTATGTTGAATTTATATCTCTCTCATCCTTGTTCTTAGCATGTAGTTTTATGGCTCTTGTCTGGAAGATTTTGTTCTGAAGGTCTTATTGTTATTAGTGCTATTAGCCCTTAAGCCAATATCAGTTTGTATTAGTCGTGTTGGAGAAAAACCCCTTGGGCCAATATCTATGGTAAATTGGGAGGATGCATTCTGATTTCTTAAAATAGCTTGCCTAGAAAGTGAGTTGGGGATTGTTTTTTTTGCTTCTTTCTTTTTAGTTCAGATTCATTAGTTAACTGCAATCAAAGAATTGCGCCATTGTTACTAATATTTTGTTTGAATTGCAACAGATTGTTTATGATGTTACTGAAATGGAGAGCTTTAACAACATCAAGCAATGGCTGAATGAGATTGATAGATATGCTAATGATAGTGTATGCAAGCTTTTAGTAGGAAATAAGTGTGATTTAGTTGAGAACAAGGTTGTTGACACGCAGACAGCGAAGGTATGGTTTTTATTTTAATTATGCCATTAGTCTTAAAACTTCAACTTTTCTTTTAGTTTGCTTCCACTTTTAGGTTTTCAGCAGGACCTGCCTATTAATATGCTAGTGTTTTGGTACCACAATTTATTCTTCCTTGTATAATCGCAAGTGATTGTCTACAAATTTTTTGCAAATTCATTCAGCCACATTTGATTGAATGTTCCTATTATTTTCGATGACCTTCAAAGTAAATCAACTATACTTTTATTTCTGAACTTCAAGTTTTAATATAACCTCTGTCAAGTATCAATAGTTTTAGGTCTTATTCCTTTCTCTCTCATGACTACTTCTCCTTGACCTGTCCTCTAGAATATAGAAGATGAGATAACTTAATACTTTGATTTATCGTGCTTCTTTGTCATGGATGGATTGTAGGCATTTGCAGAAGAGCTCGGAATCCCTTTTCTAGAGACGAGTGCAAAAGACTCGATCAACGTGGAGCAAGCTTTCTTAACTATGGCTGCTGAAATAAAGAAAAAGTAATGGCCATTCTCCTCCCTACCCTTTACAACTATAATGTTGTGGCATGGTTTTTTTATCCTTTTTTTCTTCACTTTTCCTCCAAGATCGTTGAGAAATTCAATAGGTTGTTTCAATCAACTTGCTTATCTGGAAAGTGGACTTTTTCCATTATTGGCTTAATGTTGAATCTCTCTCTCATTATATCGTTTTTGACAATTCAAAATGTTTATTAGAATGGGGAGCCAGCCAACTTCGTCCAAGTCGTCAGGAAATGTGCAAATGAAGGGGCAGCCAATTCAACAAAAGAGCAGCTGTTGCAGTTGAGCATTTACTCTCACGCCTTATTATATAATGGTATAATCTAAGTTAACAAGTTTCTTAAGAAGATGAAATTGTGTTTACTTTGTGTTGGCTCAAGGATCTCTATGTAATTGTGAATTATTCCCCGTTTGAATCCTTGTGTGTATAAATGCTTTGTGACAGTTACCTTTGGATACTCTCTCTCCCTCTCCTAATCACCACTATATGCTAAAGTTTGGAGAGAATTATATCAGTGTAGTTTGGAGTAAAGAAAACTATTCCACAACATTATAGTTGTAAAGGGTAGGGAGGAGAATGGCCATTACTTTTTCTTTATTCATTGAGTATAGTTTCATTATGTCAAATGTTAATTCTGG

mRNA sequence

GTATGTTAATACTTCAATTCTCTTCTTCATTTCTTCTTTTACCTCTATTTCCCTTCTTCAATCCAACTCCTCCCATATCTTATTTCTTCTTTATGTTTTCCCCCTTTTGTAGTGATTATTTGTTCAAGCTCTTGCTAATCGGCGACTCTTCCGTCGGAAAATCTTGCCTTCTTCTCAGATTTGCGGATGATTCTTATGTGGATAGCTATATAAGTACAATTGGAGTTGATTTCAAAATCAGAACTGTGGAACTGGATGGAAAGACCATTAAGCTCCAGATTTGGGACACTGCTGGTCAGGAGAGATTCAGGACTATAACAAGTAGCTATTACAGAGGTGCACATGGAATAATTATTGTTTATGATGTTACTGAAATGGAGAGCTTTAACAACATCAAGCAATGGCTGAATGAGATTGATAGATATGCTAATGATAGTGTATGCAAGCTTTTAGTAGGAAATAAGTGTGATTTAGTTGAGAACAAGGTTGTTGACACGCAGACAGCGAAGGCATTTGCAGAAGAGCTCGGAATCCCTTTTCTAGAGACGAGTGCAAAAGACTCGATCAACGTGGAGCAAGCTTTCTTAACTATGGCTGCTGAAATAAAGAAAAAAATGGGGAGCCAGCCAACTTCGTCCAAGTCGTCAGGAAATGTGCAAATGAAGGGGCAGCCAATTCAACAAAAGAGCAGCTGTTGCAGTTGAGCATTTACTCTCACGCCTTATTATATAATGGTATAATCTAAGTTAACAAGTTTCTTAAGAAGATGAAATTGTGTTTACTTTGTGTTGGCTCAAGGATCTCTATGTAATTGTGAATTATTCCCCGTTTGAATCCTTGTGTGTATAAATGCTTTGTGACAGTTACCTTTGGATACTCTCTCTCCCTCTCCTAATCACCACTATATGCTAAAGTTTGGAGAGAATTATATCAGTGTAGTTTGGAGTAAAGAAAACTATTCCACAACATTATAGTTGTAAAGGGTAGGGAGGAGAATGGCCATTACTTTTTCTTTATTCATTGAGTATAGTTTCATTATGTCAAATGTTAATTCTGG

Coding sequence (CDS)

ATGTTAATACTTCAATTCTCTTCTTCATTTCTTCTTTTACCTCTATTTCCCTTCTTCAATCCAACTCCTCCCATATCTTATTTCTTCTTTATGTTTTCCCCCTTTTGTAGTGATTATTTGTTCAAGCTCTTGCTAATCGGCGACTCTTCCGTCGGAAAATCTTGCCTTCTTCTCAGATTTGCGGATGATTCTTATGTGGATAGCTATATAAGTACAATTGGAGTTGATTTCAAAATCAGAACTGTGGAACTGGATGGAAAGACCATTAAGCTCCAGATTTGGGACACTGCTGGTCAGGAGAGATTCAGGACTATAACAAGTAGCTATTACAGAGGTGCACATGGAATAATTATTGTTTATGATGTTACTGAAATGGAGAGCTTTAACAACATCAAGCAATGGCTGAATGAGATTGATAGATATGCTAATGATAGTGTATGCAAGCTTTTAGTAGGAAATAAGTGTGATTTAGTTGAGAACAAGGTTGTTGACACGCAGACAGCGAAGGCATTTGCAGAAGAGCTCGGAATCCCTTTTCTAGAGACGAGTGCAAAAGACTCGATCAACGTGGAGCAAGCTTTCTTAACTATGGCTGCTGAAATAAAGAAAAAAATGGGGAGCCAGCCAACTTCGTCCAAGTCGTCAGGAAATGTGCAAATGAAGGGGCAGCCAATTCAACAAAAGAGCAGCTGTTGCAGTTGA

Protein sequence

MLILQFSSSFLLLPLFPFFNPTPPISYFFFMFSPFCSDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDLVENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKSSGNVQMKGQPIQQKSSCCS

Homology

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BLAST of IVF0000234 vs. ExPASy Swiss-Prot
Match: Q9ZRE2 (Ras-related protein RABD1 OS=Arabidopsis thaliana OX=3702 GN=RABD1 PE=1 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 2.6e-89
Identity = 165/197 (83.76%), Postives = 182/197 (92.39%), Query Frame = 0


Query: 38  DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 97
           DYLFKLLLIGDSSVGKSCLLLRFADD+Y+DSYISTIGVDFKIRT+E DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTA 65

Query: 98  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL 157
           GQERFRTITSSYYRGAHGIIIVYD TEMESFNN+KQWL+EIDRYAN+SVCKLL+GNK D+
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDM 125

Query: 158 VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKSS-- 217
           VE+KVV T+T +A A+ELGIPFLETSAKDSINVEQAFLT+A EIKKKMGSQ  ++K+S  
Sbjct: 126 VESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKTSGP 185

Query: 218 GNVQMKGQPIQQKSSCC 233
           G VQMKGQPIQQ +  C
Sbjct: 186 GTVQMKGQPIQQNNGGC 202

[Close]

BLAST of IVF0000234 vs. ExPASy Swiss-Prot
Match: P40392 (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC1 PE=2 SV=2)

HSP 1 Score: 315.5 bits (807), Expect = 5.2e-85
Identity = 155/197 (78.68%), Postives = 176/197 (89.34%), Query Frame = 0


Query: 38  DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 97
           DYLFKLLLIGDS VGKSCLLLRFADDSY++SYISTIGVDFKIRTVE DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 98  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL 157
           GQERFRTITSSYYRGAHGII+VYDVT+ ESFNN+KQWLNEIDRYA+++V KLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 125

Query: 158 VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQP-TSSKSSG 217
            EN+VV  +  KA A+E+GIPFLETSAKD+ NVE+AF+TMA EIK +M SQP T++    
Sbjct: 126 AENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNASKPA 185

Query: 218 NVQMKGQPIQQKSSCCS 234
            VQM+GQP+ Q+SSCCS
Sbjct: 186 TVQMRGQPVAQQSSCCS 202

[Close]

BLAST of IVF0000234 vs. ExPASy Swiss-Prot
Match: Q9SEH3 (Ras-related protein RABD2c OS=Arabidopsis thaliana OX=3702 GN=RABD2C PE=1 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 8.8e-85
Identity = 153/196 (78.06%), Postives = 172/196 (87.76%), Query Frame = 0


Query: 38  DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 97
           DYLFKLLLIGDS VGKSCLLLRFADDSY+DSYISTIGVDFKIRTVE DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 98  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL 157
           GQERFRTITSSYYRGAHGII+ YDVT++ESFNN+KQWLNEIDRYA+++V KLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 125

Query: 158 VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKSSGN 217
              KVV T+TAKAFA+ELGIPFLETSAK++ NVE+AF+ M A IK +M SQP        
Sbjct: 126 TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSKPPT 185

Query: 218 VQMKGQPIQQKSSCCS 234
           VQ++GQP+ Q+S CCS
Sbjct: 186 VQIRGQPVNQQSGCCS 201

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BLAST of IVF0000234 vs. ExPASy Swiss-Prot
Match: Q05737 (GTP-binding protein YPTM2 OS=Zea mays OX=4577 GN=YPTM2 PE=2 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 1.1e-84
Identity = 156/197 (79.19%), Postives = 177/197 (89.85%), Query Frame = 0


Query: 38  DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 97
           DYLFKLLLIGDS VGKSCLLLRFADDSY+DSYISTIGVDFKIRTVE DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 98  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL 157
           GQERFRTITSSYYRGAHGIIIVYDVT+ ESFNN+KQWLNEIDRYA+D+V KLLVGNK DL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSDL 125

Query: 158 VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKS-SG 217
             NKVV T+TAKAFA+E+GIPF+ETSAK++ NV+QAF+ MAA IK +M SQP ++ +   
Sbjct: 126 TANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAANARPA 185

Query: 218 NVQMKGQPIQQKSSCCS 234
            VQ++GQP+ QK+SCCS
Sbjct: 186 TVQIRGQPVNQKTSCCS 202

[Close]

BLAST of IVF0000234 vs. ExPASy Swiss-Prot
Match: P16976 (GTP-binding protein YPTM1 OS=Zea mays OX=4577 GN=YPTM1 PE=2 SV=2)

HSP 1 Score: 313.9 bits (803), Expect = 1.5e-84
Identity = 161/202 (79.70%), Postives = 179/202 (88.61%), Query Frame = 0


Query: 38  DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 97
           DYLFKLLLIGDSSVGKSC LLRFADDSYVDSYISTIGVDFKIRTVE++GKT+KLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWDTA 65

Query: 98  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL 157
           GQERFRTITSSYYRGAHGIIIVYD+T+MESFNN+KQWL+EIDRYANDSV KLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQWLDEIDRYANDSVRKLLVGNKCDL 125

Query: 158 VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKK-KMGSQPTSSKSSG 217
            EN+ VDT  A+A+A+E+GIPFLETSAK+SINVE+AFL M+A IKK K GSQ    +   
Sbjct: 126 AENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAALERKPS 185

Query: 218 N-VQMKGQPIQQK----SSCCS 234
           N VQMKG+PIQQ+    S CCS
Sbjct: 186 NVVQMKGRPIQQEQQKSSRCCS 207

[Close]

BLAST of IVF0000234 vs. ExPASy TrEMBL
Match: A0A1S3BTF1 (ras-related protein RABD1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493312 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 8.8e-104
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 38  DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 97
           DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65

Query: 98  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL 157
           GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL 125

Query: 158 VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKSSGN 217
           VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKSSGN
Sbjct: 126 VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKSSGN 185

Query: 218 VQMKGQPIQQKSSCCS 234
           VQMKGQPIQQKSSCCS
Sbjct: 186 VQMKGQPIQQKSSCCS 201

[Close]

BLAST of IVF0000234 vs. ExPASy TrEMBL
Match: A0A0A0L6Q4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110640 PE=4 SV=1)

HSP 1 Score: 382.9 bits (982), Expect = 9.7e-103
Identity = 193/196 (98.47%), Postives = 195/196 (99.49%), Query Frame = 0


Query: 38  DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 97
           DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65

Query: 98  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL 157
           GQERFRTITSSYYRGAHGIIIVYDVTEMESFNN+KQWLNEIDRYANDSVCKLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125

Query: 158 VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKSSGN 217
           VENKVVDTQTAKAFA+ELGIPFLETSAKDS NVEQAFLTMAAEIKKKMGSQPTSSKSSGN
Sbjct: 126 VENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEIKKKMGSQPTSSKSSGN 185

Query: 218 VQMKGQPIQQKSSCCS 234
           VQMKGQPIQQKSSCCS
Sbjct: 186 VQMKGQPIQQKSSCCS 201

[Close]

BLAST of IVF0000234 vs. ExPASy TrEMBL
Match: A0A6J1JCC5 (ras-related protein RABD1-like OS=Cucurbita maxima OX=3661 GN=LOC111483110 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.4e-101
Identity = 189/196 (96.43%), Postives = 195/196 (99.49%), Query Frame = 0


Query: 38  DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 97
           DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKT+KLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTVKLQIWDTA 65

Query: 98  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL 157
           GQERFRTITSSYYRGAHGIIIVYDVTEMESFNN+KQWLNEIDRYANDSVCKLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125

Query: 158 VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKSSGN 217
           VENKVVDT+TAKAFA+ELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQP+SS SSGN
Sbjct: 126 VENKVVDTETAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSSMSSGN 185

Query: 218 VQMKGQPIQQKSSCCS 234
           VQMKGQPI+QKSSCCS
Sbjct: 186 VQMKGQPIEQKSSCCS 201

[Close]

BLAST of IVF0000234 vs. ExPASy TrEMBL
Match: A0A5J5BR95 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_020233 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.4e-101
Identity = 191/206 (92.72%), Postives = 200/206 (97.09%), Query Frame = 0


Query: 28  FFFMFSPFCSDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGK 87
           FFF FS  CSDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGK
Sbjct: 15  FFFSFSVVCSDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGK 74

Query: 88  TIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVC 147
           T+KLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNN+KQWLNEIDRYANDSVC
Sbjct: 75  TVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVC 134

Query: 148 KLLVGNKCDLVENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGS 207
           KLLVGNKCDLVENKVVDTQTA+AFA+ELGIPFLETSAKDSINVEQAFLTMA EIKKKMGS
Sbjct: 135 KLLVGNKCDLVENKVVDTQTAQAFADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGS 194

Query: 208 QPTSS-KSSGNVQMKGQPIQQKSSCC 233
           QP+++ KS+G VQMKGQPIQQKS+CC
Sbjct: 195 QPSANKKSTGTVQMKGQPIQQKSNCC 220

[Close]

BLAST of IVF0000234 vs. ExPASy TrEMBL
Match: A0A6J1EMZ9 (ras-related protein RABD1-like OS=Cucurbita moschata OX=3662 GN=LOC111436063 PE=4 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 2.4e-101
Identity = 189/196 (96.43%), Postives = 195/196 (99.49%), Query Frame = 0


Query: 38  DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 97
           DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKT+KLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTVKLQIWDTA 65

Query: 98  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL 157
           GQERFRTITSSYYRGAHGIIIVYDVTEMESFNN+KQWLNEIDRYANDSVCKLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125

Query: 158 VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKSSGN 217
           VENKVVDT+TAKAFA+ELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQP+SS SSGN
Sbjct: 126 VENKVVDTETAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSSMSSGN 185

Query: 218 VQMKGQPIQQKSSCCS 234
           VQMKGQPI+QKSSCCS
Sbjct: 186 VQMKGQPIEQKSSCCS 201

[Close]

BLAST of IVF0000234 vs. NCBI nr
Match: XP_008452238.1 (PREDICTED: ras-related protein RABD1 isoform X1 [Cucumis melo])

HSP 1 Score: 385 bits (990), Expect = 3.15e-134
Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 0


Query: 38  DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 97
           DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65

Query: 98  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL 157
           GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL 125

Query: 158 VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKSSGN 217
           VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKSSGN
Sbjct: 126 VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKSSGN 185

Query: 218 VQMKGQPIQQKSSCCS 233
           VQMKGQPIQQKSSCCS
Sbjct: 186 VQMKGQPIQQKSSCCS 201

[Close]

BLAST of IVF0000234 vs. NCBI nr
Match: XP_004133726.1 (ras-related protein RABD1 [Cucumis sativus] >KGN56267.1 hypothetical protein Csa_009820 [Cucumis sativus])

HSP 1 Score: 382 bits (981), Expect = 7.42e-133
Identity = 193/196 (98.47%), Postives = 195/196 (99.49%), Query Frame = 0


Query: 38  DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 97
           DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65

Query: 98  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL 157
           GQERFRTITSSYYRGAHGIIIVYDVTEMESFNN+KQWLNEIDRYANDSVCKLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125

Query: 158 VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKSSGN 217
           VENKVVDTQTAKAFA+ELGIPFLETSAKDS NVEQAFLTMAAEIKKKMGSQPTSSKSSGN
Sbjct: 126 VENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEIKKKMGSQPTSSKSSGN 185

Query: 218 VQMKGQPIQQKSSCCS 233
           VQMKGQPIQQKSSCCS
Sbjct: 186 VQMKGQPIQQKSSCCS 201

[Close]

BLAST of IVF0000234 vs. NCBI nr
Match: XP_022929522.1 (ras-related protein RABD1-like [Cucurbita moschata] >XP_022985018.1 ras-related protein RABD1-like [Cucurbita maxima] >XP_023551876.1 ras-related protein RABD1-like [Cucurbita pepo subsp. pepo] >KAG6577361.1 Ras-related protein RABD1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015448.1 Ras-related protein RABD1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 377 bits (969), Expect = 5.00e-131
Identity = 189/196 (96.43%), Postives = 195/196 (99.49%), Query Frame = 0


Query: 38  DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 97
           DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKT+KLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTVKLQIWDTA 65

Query: 98  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL 157
           GQERFRTITSSYYRGAHGIIIVYDVTEMESFNN+KQWLNEIDRYANDSVCKLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125

Query: 158 VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKSSGN 217
           VENKVVDT+TAKAFA+ELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQP+SS SSGN
Sbjct: 126 VENKVVDTETAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSSMSSGN 185

Query: 218 VQMKGQPIQQKSSCCS 233
           VQMKGQPI+QKSSCCS
Sbjct: 186 VQMKGQPIEQKSSCCS 201

[Close]

BLAST of IVF0000234 vs. NCBI nr
Match: KAA8545449.1 (hypothetical protein F0562_020233 [Nyssa sinensis])

HSP 1 Score: 377 bits (969), Expect = 1.02e-130
Identity = 191/206 (92.72%), Postives = 200/206 (97.09%), Query Frame = 0


Query: 28  FFFMFSPFCSDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGK 87
           FFF FS  CSDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGK
Sbjct: 15  FFFSFSVVCSDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGK 74

Query: 88  TIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVC 147
           T+KLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNN+KQWLNEIDRYANDSVC
Sbjct: 75  TVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVC 134

Query: 148 KLLVGNKCDLVENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGS 207
           KLLVGNKCDLVENKVVDTQTA+AFA+ELGIPFLETSAKDSINVEQAFLTMA EIKKKMGS
Sbjct: 135 KLLVGNKCDLVENKVVDTQTAQAFADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGS 194

Query: 208 QPTSSK-SSGNVQMKGQPIQQKSSCC 232
           QP+++K S+G VQMKGQPIQQKS+CC
Sbjct: 195 QPSANKKSTGTVQMKGQPIQQKSNCC 220

[Close]

BLAST of IVF0000234 vs. NCBI nr
Match: XP_022136911.1 (ras-related protein RABD1 [Momordica charantia])

HSP 1 Score: 375 bits (964), Expect = 2.89e-130
Identity = 189/196 (96.43%), Postives = 194/196 (98.98%), Query Frame = 0


Query: 38  DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 97
           DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 65

Query: 98  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL 157
           GQERFRTITSSYYRGAHGIIIVYDVTEMESFNN+KQWLNEIDRYANDSVCKLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQWLNEIDRYANDSVCKLLVGNKCDL 125

Query: 158 VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKSSGN 217
           VENKVVDTQTAKA A+ELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQP+S+KSSG 
Sbjct: 126 VENKVVDTQTAKALADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSSTKSSGT 185

Query: 218 VQMKGQPIQQKSSCCS 233
           VQMKGQPI+QKSSCCS
Sbjct: 186 VQMKGQPIEQKSSCCS 201

[Close]

BLAST of IVF0000234 vs. TAIR 10
Match: AT3G11730.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 329.7 bits (844), Expect = 1.9e-90
Identity = 165/197 (83.76%), Postives = 182/197 (92.39%), Query Frame = 0


Query: 38  DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 97
           DYLFKLLLIGDSSVGKSCLLLRFADD+Y+DSYISTIGVDFKIRT+E DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTA 65

Query: 98  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL 157
           GQERFRTITSSYYRGAHGIIIVYD TEMESFNN+KQWL+EIDRYAN+SVCKLL+GNK D+
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDM 125

Query: 158 VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKSS-- 217
           VE+KVV T+T +A A+ELGIPFLETSAKDSINVEQAFLT+A EIKKKMGSQ  ++K+S  
Sbjct: 126 VESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKTSGP 185

Query: 218 GNVQMKGQPIQQKSSCC 233
           G VQMKGQPIQQ +  C
Sbjct: 186 GTVQMKGQPIQQNNGGC 202

[Close]

BLAST of IVF0000234 vs. TAIR 10
Match: AT4G17530.1 (RAB GTPase homolog 1C )

HSP 1 Score: 314.7 bits (805), Expect = 6.3e-86
Identity = 153/196 (78.06%), Postives = 172/196 (87.76%), Query Frame = 0


Query: 38  DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 97
           DYLFKLLLIGDS VGKSCLLLRFADDSY+DSYISTIGVDFKIRTVE DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 98  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL 157
           GQERFRTITSSYYRGAHGII+ YDVT++ESFNN+KQWLNEIDRYA+++V KLLVGNKCDL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 125

Query: 158 VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKSSGN 217
              KVV T+TAKAFA+ELGIPFLETSAK++ NVE+AF+ M A IK +M SQP        
Sbjct: 126 TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSKPPT 185

Query: 218 VQMKGQPIQQKSSCCS 234
           VQ++GQP+ Q+S CCS
Sbjct: 186 VQIRGQPVNQQSGCCS 201

[Close]

BLAST of IVF0000234 vs. TAIR 10
Match: AT5G47200.1 (RAB GTPase homolog 1A )

HSP 1 Score: 309.7 bits (792), Expect = 2.0e-84
Identity = 152/196 (77.55%), Postives = 171/196 (87.24%), Query Frame = 0


Query: 38  DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 97
           DYLFKLLLIGDS VGKSCLLLRFADDSY+DSYISTIGVDFKIRTVE DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 98  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL 157
           GQERFRTITSSYYRGAHGII+ YDVT++ESFNN+KQWLNEIDRYA+++V KLLVGNK DL
Sbjct: 66  GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKNDL 125

Query: 158 VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKSSGN 217
              KVV T+TAKAFA+ELGIPFLETSAK++ NVE+AF+ M A IK +M SQP        
Sbjct: 126 TSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGAKPPT 185

Query: 218 VQMKGQPIQQKSSCCS 234
           VQ++GQP+ Q+S CCS
Sbjct: 186 VQIRGQPVNQQSGCCS 201

[Close]

BLAST of IVF0000234 vs. TAIR 10
Match: AT1G02130.1 (RAS 5 )

HSP 1 Score: 306.6 bits (784), Expect = 1.7e-83
Identity = 151/197 (76.65%), Postives = 175/197 (88.83%), Query Frame = 0


Query: 38  DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 97
           DYLFKLLLIGDS VGKSCLLLRF+DDSYV+SYISTIGVDFKIRTVE DGKTIKLQIWDTA
Sbjct: 6   DYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

Query: 98  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL 157
           GQERFRTITSSYYRGAHGIIIVYDVT+ ESFNN+KQWL+EIDRYA+D+V KLLVGNK DL
Sbjct: 66  GQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDL 125

Query: 158 VENKVVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKS-SG 217
            EN+ +  +TAKAFA+E+GIPF+ETSAKD+ NVEQAF+ M+A IK++M SQP  + +   
Sbjct: 126 TENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNARPP 185

Query: 218 NVQMKGQPIQQKSSCCS 234
            VQ++GQP+ QK+ CCS
Sbjct: 186 TVQIRGQPVAQKNGCCS 202

[Close]

BLAST of IVF0000234 vs. TAIR 10
Match: AT3G09900.1 (RAB GTPase homolog E1E )

HSP 1 Score: 233.0 bits (593), Expect = 2.4e-61
Identity = 120/204 (58.82%), Postives = 153/204 (75.00%), Query Frame = 0


Query: 38  DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 97
           DYL KLLLIGDS VGKSCLLLRF+DD++  S+I+TIG+DFKIRTVELDGK IKLQIWDTA
Sbjct: 13  DYLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTA 72

Query: 98  GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNIKQWLNEIDRYANDSVCKLLVGNKCDL 157
           GQERFRTIT++YYRGA GI++VYDVT+  SFNNI+ W+  I+++A+DSV K+LVGNK D+
Sbjct: 73  GQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDSVNKILVGNKADM 132

Query: 158 VENK-VVDTQTAKAFAEELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTSSKSSG 217
            E+K  V T   +A A+E GI F ETSAK + NVEQ FL++A +IK+++    T ++  G
Sbjct: 133 DESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRLTESDTKAEPQG 192

Query: 218 NVQMK-------GQPIQQKSSCCS 234
               K            +KS+CCS
Sbjct: 193 IKITKQDANKASSSSTNEKSACCS 216

The following BLAST results are available for this feature:

BLAST of IVF0000234 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZRE2	2.6e-89	83.76	Ras-related protein RABD1 OS=Arabidopsis thaliana OX=3702 GN=RABD1 PE=1 SV=1	[more]
P40392	5.2e-85	78.68	Ras-related protein RIC1 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC1 PE=2 S...	[more]
Q9SEH3	8.8e-85	78.06	Ras-related protein RABD2c OS=Arabidopsis thaliana OX=3702 GN=RABD2C PE=1 SV=1	[more]
Q05737	1.1e-84	79.19	GTP-binding protein YPTM2 OS=Zea mays OX=4577 GN=YPTM2 PE=2 SV=1	[more]
P16976	1.5e-84	79.70	GTP-binding protein YPTM1 OS=Zea mays OX=4577 GN=YPTM1 PE=2 SV=2	[more]

BLAST of IVF0000234 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BTF1	8.8e-104	100.00	ras-related protein RABD1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493312 PE=...	[more]
A0A0A0L6Q4	9.7e-103	98.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G110640 PE=4 SV=1	[more]
A0A6J1JCC5	2.4e-101	96.43	ras-related protein RABD1-like OS=Cucurbita maxima OX=3661 GN=LOC111483110 PE=4 ...	[more]
A0A5J5BR95	2.4e-101	92.72	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_020233 PE=4 SV=1	[more]
A0A6J1EMZ9	2.4e-101	96.43	ras-related protein RABD1-like OS=Cucurbita moschata OX=3662 GN=LOC111436063 PE=...	[more]

BLAST of IVF0000234 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008452238.1	3.15e-134	100.00	PREDICTED: ras-related protein RABD1 isoform X1 [Cucumis melo]	[more]
XP_004133726.1	7.42e-133	98.47	ras-related protein RABD1 [Cucumis sativus] >KGN56267.1 hypothetical protein Csa...	[more]
XP_022929522.1	5.00e-131	96.43	ras-related protein RABD1-like [Cucurbita moschata] >XP_022985018.1 ras-related ...	[more]
KAA8545449.1	1.02e-130	92.72	hypothetical protein F0562_020233 [Nyssa sinensis]	[more]
XP_022136911.1	2.89e-130	96.43	ras-related protein RABD1 [Momordica charantia]	[more]

BLAST of IVF0000234 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G11730.1	1.9e-90	83.76	Ras-related small GTP-binding family protein	[more]
AT4G17530.1	6.3e-86	78.06	RAB GTPase homolog 1C	[more]
AT5G47200.1	2.0e-84	77.55	RAB GTPase homolog 1A	[more]
AT1G02130.1	1.7e-83	76.65	RAS 5	[more]
AT3G09900.1	2.4e-61	58.82	RAB GTPase homolog E1E	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 82..104 score: 59.25 coord: 64..80 score: 35.74 coord: 179..201 score: 46.53 coord: 41..62 score: 54.21 coord: 144..157 score: 53.03
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 26..205 e-value: 0.0017 score: 4.8
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 38..204 e-value: 9.6E-39 score: 144.7
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 41..204 e-value: 2.7E-110 score: 382.4
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 46..231 e-value: 3.3E-5 score: 24.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..233
None	No IPR available	PANTHER	PTHR47977	LD21953P-RELATED	coord: 37..233
None	No IPR available	PANTHER	PTHR47977:SF6	RAS-RELATED PROTEIN RABD2A-LIKE	coord: 37..233
None	No IPR available	PROSITE	PS51419	RAB	coord: 36..232 score: 38.464317
None	No IPR available	PROSITE	PS51420	RHO	coord: 34..202 score: 9.802029
None	No IPR available	CDD	cd01869	Rab1_Ypt1	coord: 39..204 e-value: 1.45203E-126 score: 353.172
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 43..202 e-value: 3.2E-15 score: 66.6
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 42..202 e-value: 2.5E-65 score: 219.0
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 31..233 score: 22.068293
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 39..196 e-value: 1.8E-35 score: 120.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 36..232 e-value: 6.5E-77 score: 259.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 38..219

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0000234.2	IVF0000234.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding