Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATGATGTTCGAATGAGGGGTCATCGATTTAAAAGCACTCCCTCTCGAAGACTCTATCGCCTACCGTCTGAAAAGAATCAGGTAAATCCTTCTAATAGCCCAAATTTGTCTGTGCATGATAAGAATGTTATTGGTATTGCTGCTGAGAATGTTGAAACTAAAGTGGTTGTCTCTAAGTCTCATATGTCTGAAATGGATTCAGATGAAAGAGATGATGTTCCACTAGCTAGGTTGTTAAAGAAGGGTTTATTTTTTAAAGTTGGGTCCATGGTTGCTGATGCTTCTATTTCTTTAGTTCACTCTATTGGTAGTTCTTCCTCTGAAGATATATTTGTTCCAACATCTAGTCAGCCCTCTACCACAAGTAAAGACACTGGACAATCTGGTCATTCTCCACCAGTTAGGTCTCCTATTTGA
mRNA sequence
ATGCATGATGTTCGAATGAGGGGTCATCGATTTAAAAGCACTCCCTCTCGAAGACTCTATCGCCTACCGTCTGAAAAGAATCAGGTAAATCCTTCTAATAGCCCAAATTTGTCTGTGCATGATAAGAATGTTATTGGTATTGCTGCTGAGAATGTTGAAACTAAAGTGGTTGTCTCTAAGTCTCATATGTCTGAAATGGATTCAGATGAAAGAGATGATGTTCCACTAGCTAGGTTGTTAAAGAAGGGTTTATTTTTTAAAGTTGGGTCCATGGTTGCTGATGCTTCTATTTCTTTAGTTCACTCTATTGGTAGTTCTTCCTCTGAAGATATATTTGTTCCAACATCTAGTCAGCCCTCTACCACAAGTAAAGACACTGGACAATCTGGTCATTCTCCACCAGTTAGGTCTCCTATTTGA
Coding sequence (CDS)
ATGCATGATGTTCGAATGAGGGGTCATCGATTTAAAAGCACTCCCTCTCGAAGACTCTATCGCCTACCGTCTGAAAAGAATCAGGTAAATCCTTCTAATAGCCCAAATTTGTCTGTGCATGATAAGAATGTTATTGGTATTGCTGCTGAGAATGTTGAAACTAAAGTGGTTGTCTCTAAGTCTCATATGTCTGAAATGGATTCAGATGAAAGAGATGATGTTCCACTAGCTAGGTTGTTAAAGAAGGGTTTATTTTTTAAAGTTGGGTCCATGGTTGCTGATGCTTCTATTTCTTTAGTTCACTCTATTGGTAGTTCTTCCTCTGAAGATATATTTGTTCCAACATCTAGTCAGCCCTCTACCACAAGTAAAGACACTGGACAATCTGGTCATTCTCCACCAGTTAGGTCTCCTATTTGA
Protein sequence
MHDVRMRGHRFKSTPSRRLYRLPSEKNQVNPSNSPNLSVHDKNVIGIAAENVETKVVVSKSHMSEMDSDERDDVPLARLLKKGLFFKVGSMVADASISLVHSIGSSSSEDIFVPTSSQPSTTSKDTGQSGHSPPVRSPI
Homology
BLAST of IVF0000214 vs. ExPASy TrEMBL
Match:
A0A5D3BWJ2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2119G00410 PE=4 SV=1)
HSP 1 Score: 265.0 bits (676), Expect = 1.8e-67
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
Query: 1 MHDVRMRGHRFKSTPSRRLYRLPSEKNQVNPSNSPNLSVHDKNVIGIAAENVETKVVVSK 60
MHDVRMRGHRFKSTPSRRLYRLPSEKNQVNPSNSPNLSVHDKNVIGIAAENVETKVVVSK
Sbjct: 27 MHDVRMRGHRFKSTPSRRLYRLPSEKNQVNPSNSPNLSVHDKNVIGIAAENVETKVVVSK 86
Query: 61 SHMSEMDSDERDDVPLARLLKKGLFFKVGSMVADASISLVHSIGSSSSEDIFVPTSSQPS 120
SHMSEMDSDERDDVPLARLLKKGLFFKVGSMVADASISLVHSIGSSSSEDIFVPTSSQPS
Sbjct: 87 SHMSEMDSDERDDVPLARLLKKGLFFKVGSMVADASISLVHSIGSSSSEDIFVPTSSQPS 146
Query: 121 TTSKDTGQSGHSPPVRSPI 140
TTSKDTGQSGHSPPVRSPI
Sbjct: 147 TTSKDTGQSGHSPPVRSPI 165
BLAST of IVF0000214 vs. ExPASy TrEMBL
Match:
A0A5D3BU49 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1161G00370 PE=4 SV=1)
HSP 1 Score: 147.5 bits (371), Expect = 4.1e-32
Identity = 81/137 (59.12%), Postives = 102/137 (74.45%), Query Frame = 0
Query: 1 MHDVRMRGHRFKSTPSRRLYRLPSEKNQVNPSNSPNLSVHDKNVIGIAAENVETKVVVSK 60
MH VRMRGH FKS PSRR Y LPSEKNQV+ S+S ++S+HD+NV I +NVE+++V SK
Sbjct: 27 MHGVRMRGHHFKSNPSRRPYELPSEKNQVSLSDSLSVSLHDENVSDITHDNVESELVPSK 86
Query: 61 SHMSEMDSDERDDVPLARLLKKGLFFKVGSMVADASISLVHSIGSSSSEDIFVPTSSQPS 120
SH+ MD DERDDVPLARLLKKGLF KVGS+V +HS SSSS ++F+PT Q S
Sbjct: 87 SHLC-MDLDERDDVPLARLLKKGLFSKVGSVVVSPPAPSIHSNSSSSSHNVFLPTPGQSS 146
Query: 121 TTSKDTGQSGHSPPVRS 138
T +++ +GH PP+ S
Sbjct: 147 TMNENLEHTGHCPPIWS 162
BLAST of IVF0000214 vs. ExPASy TrEMBL
Match:
A0A5A7U0B3 (Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00340 PE=4 SV=1)
HSP 1 Score: 145.2 bits (365), Expect = 2.0e-31
Identity = 82/121 (67.77%), Postives = 94/121 (77.69%), Query Frame = 0
Query: 1 MHDVRMRGHRFKSTPSRRLYRLPSEKNQVNPSNSPNLSVHDKNVIGIAAENVETKVVVSK 60
MH VR+R F+STP+RR Y PSEKNQVNP + PNLS+HD N GIA ENV+T+ VV +
Sbjct: 1 MHGVRIRDRLFESTPTRRPYCFPSEKNQVNPFDCPNLSMHDDNDAGIALENVKTESVVFE 60
Query: 61 SHMSEMDSDERDDVPLARLLKKGLFFKVGSMVADASISLVHSIGSSSSEDIFVPTSSQPS 120
SHMS+MDSDERDDVPLARLLKKGLF K S VADA I+ V+S SSSS+DIFVPT S
Sbjct: 61 SHMSKMDSDERDDVPLARLLKKGLFSKDESTVADAPITSVYSDDSSSSKDIFVPTPVGQS 120
Query: 121 T 122
T
Sbjct: 121 T 121
BLAST of IVF0000214 vs. ExPASy TrEMBL
Match:
A0A5A7VGH3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17G001030 PE=4 SV=1)
HSP 1 Score: 144.4 bits (363), Expect = 3.5e-31
Identity = 79/127 (62.20%), Postives = 95/127 (74.80%), Query Frame = 0
Query: 1 MHDVRMRGHRFKSTPSRRLYRLPSEKNQVNPSNSPNLSVHDKNVIGIAAENVETKVVVSK 60
MH +RM G RFKSTP+RR YR PS+K QVN SNSP LS+HD+ + AAENVE VVSK
Sbjct: 1 MHGIRMMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSK 60
Query: 61 SHMSEMDSDERDDVPLARLLKKGLFFKVGSMVADASISLVHSIGSSSSEDIFVPTSSQPS 120
+++S+MDSDE DDVPLARLLKK LF V +AD ++L H S+SSEDI VPT QPS
Sbjct: 61 TYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLAHFHESASSEDIVVPTPGQPS 120
Query: 121 TTSKDTG 128
TT++D G
Sbjct: 121 TTNEDIG 127
BLAST of IVF0000214 vs. ExPASy TrEMBL
Match:
A0A5A7TSJ3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G00920 PE=4 SV=1)
HSP 1 Score: 134.4 bits (337), Expect = 3.6e-28
Identity = 78/116 (67.24%), Postives = 88/116 (75.86%), Query Frame = 0
Query: 1 MHDVRMRGHRFKSTPSRRLYRLPSEKNQVNPSNSPNLSVHDKNVIGIAAENVETKVVVSK 60
MH VRMRGHRFKSTPSRR Y L EKNQVN +S NLSVHD+ ++GI AENVE++ VVSK
Sbjct: 1 MHGVRMRGHRFKSTPSRRPYCLSFEKNQVNLFDSSNLSVHDEKMVGIVAENVESESVVSK 60
Query: 61 SHMSEMDSDERDDVPLARLLKKGLFFKVGSMVADASISLVH-----SIGSSSSEDI 112
SHMSEMDS+ERDDVPL LLKK LF KVGS + DA S V+ SI +SS DI
Sbjct: 61 SHMSEMDSNERDDVPLVSLLKKDLFSKVGSTIVDALGSSVYSDVRSSIQTSSLADI 116
BLAST of IVF0000214 vs. NCBI nr
Match:
KAA0066660.1 (uncharacterized protein E6C27_scaffold979G00920 [Cucumis melo var. makuwa] >TYK04103.1 uncharacterized protein E5676_scaffold2119G00410 [Cucumis melo var. makuwa])
HSP 1 Score: 264 bits (674), Expect = 2.96e-88
Identity = 139/139 (100.00%), Postives = 139/139 (100.00%), Query Frame = 0
Query: 1 MHDVRMRGHRFKSTPSRRLYRLPSEKNQVNPSNSPNLSVHDKNVIGIAAENVETKVVVSK 60
MHDVRMRGHRFKSTPSRRLYRLPSEKNQVNPSNSPNLSVHDKNVIGIAAENVETKVVVSK
Sbjct: 27 MHDVRMRGHRFKSTPSRRLYRLPSEKNQVNPSNSPNLSVHDKNVIGIAAENVETKVVVSK 86
Query: 61 SHMSEMDSDERDDVPLARLLKKGLFFKVGSMVADASISLVHSIGSSSSEDIFVPTSSQPS 120
SHMSEMDSDERDDVPLARLLKKGLFFKVGSMVADASISLVHSIGSSSSEDIFVPTSSQPS
Sbjct: 87 SHMSEMDSDERDDVPLARLLKKGLFFKVGSMVADASISLVHSIGSSSSEDIFVPTSSQPS 146
Query: 121 TTSKDTGQSGHSPPVRSPI 139
TTSKDTGQSGHSPPVRSPI
Sbjct: 147 TTSKDTGQSGHSPPVRSPI 165
BLAST of IVF0000214 vs. NCBI nr
Match:
KAA0065426.1 (uncharacterized protein E6C27_scaffold17G001030 [Cucumis melo var. makuwa])
HSP 1 Score: 143 bits (361), Expect = 3.96e-41
Identity = 79/127 (62.20%), Postives = 95/127 (74.80%), Query Frame = 0
Query: 1 MHDVRMRGHRFKSTPSRRLYRLPSEKNQVNPSNSPNLSVHDKNVIGIAAENVETKVVVSK 60
MH +RM G RFKSTP+RR YR PS+K QVN SNSP LS+HD+ + AAENVE VVSK
Sbjct: 1 MHGIRMMGRRFKSTPTRRPYRPPSKKIQVNTSNSPLLSMHDEQISSSAAENVEVDSVVSK 60
Query: 61 SHMSEMDSDERDDVPLARLLKKGLFFKVGSMVADASISLVHSIGSSSSEDIFVPTSSQPS 120
+++S+MDSDE DDVPLARLLKK LF V +AD ++L H S+SSEDI VPT QPS
Sbjct: 61 TYISKMDSDEGDDVPLARLLKKSLFSTVEPTIADVPVTLAHFHESASSEDIVVPTPGQPS 120
Query: 121 TTSKDTG 127
TT++D G
Sbjct: 121 TTNEDIG 127
BLAST of IVF0000214 vs. NCBI nr
Match:
TYK02704.1 (uncharacterized protein E5676_scaffold1161G00370 [Cucumis melo var. makuwa])
HSP 1 Score: 146 bits (368), Expect = 9.44e-40
Identity = 80/135 (59.26%), Postives = 101/135 (74.81%), Query Frame = 0
Query: 1 MHDVRMRGHRFKSTPSRRLYRLPSEKNQVNPSNSPNLSVHDKNVIGIAAENVETKVVVSK 60
MH VRMRGH FKS PSRR Y LPSEKNQV+ S+S ++S+HD+NV I +NVE+++V SK
Sbjct: 27 MHGVRMRGHHFKSNPSRRPYELPSEKNQVSLSDSLSVSLHDENVSDITHDNVESELVPSK 86
Query: 61 SHMSEMDSDERDDVPLARLLKKGLFFKVGSMVADASISLVHSIGSSSSEDIFVPTSSQPS 120
SH+ MD DERDDVPLARLLKKGLF KVGS+V +HS SSSS ++F+PT Q S
Sbjct: 87 SHLC-MDLDERDDVPLARLLKKGLFSKVGSVVVSPPAPSIHSNSSSSSHNVFLPTPGQSS 146
Query: 121 TTSKDTGQSGHSPPV 135
T +++ +GH PP+
Sbjct: 147 TMNENLEHTGHCPPI 160
BLAST of IVF0000214 vs. NCBI nr
Match:
KAA0046929.1 (envelope-like protein [Cucumis melo var. makuwa] >TYK03222.1 envelope-like protein [Cucumis melo var. makuwa])
HSP 1 Score: 144 bits (364), Expect = 2.41e-38
Identity = 80/115 (69.57%), Postives = 92/115 (80.00%), Query Frame = 0
Query: 1 MHDVRMRGHRFKSTPSRRLYRLPSEKNQVNPSNSPNLSVHDKNVIGIAAENVETKVVVSK 60
MH VR+R F+STP+RR Y PSEKNQVNP + PNLS+HD N GIA ENV+T+ VV +
Sbjct: 1 MHGVRIRDRLFESTPTRRPYCFPSEKNQVNPFDCPNLSMHDDNDAGIALENVKTESVVFE 60
Query: 61 SHMSEMDSDERDDVPLARLLKKGLFFKVGSMVADASISLVHSIGSSSSEDIFVPT 115
SHMS+MDSDERDDVPLARLLKKGLF K S VADA I+ V+S SSSS+DIFVPT
Sbjct: 61 SHMSKMDSDERDDVPLARLLKKGLFSKDESTVADAPITSVYSDDSSSSKDIFVPT 115
BLAST of IVF0000214 vs. NCBI nr
Match:
KAA0056463.1 (uncharacterized protein E6C27_scaffold186G002350 [Cucumis melo var. makuwa] >TYK29064.1 uncharacterized protein E5676_scaffold120G001840 [Cucumis melo var. makuwa])
HSP 1 Score: 132 bits (332), Expect = 8.98e-36
Identity = 79/134 (58.96%), Postives = 95/134 (70.90%), Query Frame = 0
Query: 6 MRGHRFKSTPSRRLYRLPSEKNQVNPSNSPNLSVHDKNVIGIAAENVETKVVVSKSHMSE 65
MR RFKSTP+RR YRLPSEK+QVN S S LSV D++++ A E+VE + V +SH+SE
Sbjct: 1 MRDRRFKSTPTRRPYRLPSEKSQVNISKSSPLSVQDEHIVDSAVEDVEIALGVFESHISE 60
Query: 66 MDSDERDDVPLARLLKKGLFFKVGSMVADASISLVHSIGSSSSEDIFVPTSSQPSTTSKD 125
MD DERDDV LARLLKK LF V VAD I+ HS SSSSEDIFVPT +PS +++
Sbjct: 61 MDLDERDDVSLARLLKKWLFSNVDPYVADVPITSAHSDESSSSEDIFVPTLGRPSPINEE 120
Query: 126 TGQSGHSPPVRSPI 139
GQSG VRS +
Sbjct: 121 VGQSGGFSLVRSSV 134
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5D3BWJ2 | 1.8e-67 | 100.00 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5D3BU49 | 4.1e-32 | 59.12 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7U0B3 | 2.0e-31 | 67.77 | Envelope-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29... | [more] |
A0A5A7VGH3 | 3.5e-31 | 62.20 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7TSJ3 | 3.6e-28 | 67.24 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
KAA0066660.1 | 2.96e-88 | 100.00 | uncharacterized protein E6C27_scaffold979G00920 [Cucumis melo var. makuwa] >TYK0... | [more] |
KAA0065426.1 | 3.96e-41 | 62.20 | uncharacterized protein E6C27_scaffold17G001030 [Cucumis melo var. makuwa] | [more] |
TYK02704.1 | 9.44e-40 | 59.26 | uncharacterized protein E5676_scaffold1161G00370 [Cucumis melo var. makuwa] | [more] |
KAA0046929.1 | 2.41e-38 | 69.57 | envelope-like protein [Cucumis melo var. makuwa] >TYK03222.1 envelope-like prote... | [more] |
KAA0056463.1 | 8.98e-36 | 58.96 | uncharacterized protein E6C27_scaffold186G002350 [Cucumis melo var. makuwa] >TYK... | [more] |
Match Name | E-value | Identity | Description | |