IVF0000170 (gene) Melon (IVF77) v1

Overview


Name	IVF0000170
Type	gene
Organism	Cucumis melo L. ssp. agrestis cv. IVF77 (Melon (IVF77) v1)
Description	GTP-binding nuclear protein
Location	chr02: 14555288 .. 14557904 (-)
RNA-Seq Expression	IVF0000170
Synteny	IVF0000170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACGAAAGAGAAAAACAACGATGGAGCGTGATTCCACTACGGATCCAACGGTCAGAAAAATAGCTTCATTTGAAAGCCAACTACAGCTTACTCTCTATAAACCCTCCTCTTCACCTCTCAAACCCCCATTTTAAACCTAAATCTATCGCCGATTTCTTCATCTCCCACTCCATTTTCAATTCGACGCTATCCTATGGTAATCATTCCTCTCTCTTTCTTTTTACTCTCTCTTCTTCTTCACCCCCTTACTCTTTCTCACTATTTTCTTTATTCTGTTTCCTTTTCGTTTTCCTAGGCTTTGCCGGACCAGAAGACTGTTGATTATCCTAGTTTCAAGCTTGTCATTGTTGGTGATGGTGGCACTGGTATGTTCTTTTTCTTCCTGGCTGGTACTGGTAGTATTCTTTTCAATTTGGAGAGTCAAGAACGAAGCTTAAAACTTTCAAATGTTTTAATGCCGTTGGTTTTAACAAAGATCGATGGGGCATTGGATTCTTTATCTGAGAAGAAAACTTGTCTCTGGTCTATTAGGGTTTTAATCCCTCTGATAGCACCCGATAGTCGAAGGGTATTCTAGATTATTTCTTTAAAGAGCATGTATAATATAATCCAGTTACTTTGTTTCTGTTTTTGGCTTAGATAATTTAAATAGGAAATTCGTCATTCTTCGTTGCATAAAAACTCGAAAGTTCTCATGAGATTTCCTGGTAAATGAGAATTTTGAAACGGTATCGACAAAAAAAAAATGAAAAGAAATAGATAAAGATAAAGAAAGAAATATTTCGAACTTTCAGAATATCAGATTTTGTTCATCAGGTAGATTTTAATTGTTTGATTTGCTTCAGTTTGAAGGCCCTTCCTTCGTTGAGATGGATTCATCTTATACTTAACAAGGCTTCAAATTACGAGTATGACTGAATCATGTATGTTATGTTTGCTCAGGGAAAACCACATTTGTGAAAAGACATCTCACAGGGGAATTCGAAAAGAAATATGAACGTAAGAATTGTTGCTATCCCCCCAATTTTTTTTTATTCATTGTTAGAGATAGGGTTTTAGTTAAAATTAATGAACAACTCATAAATATGGGTTTGGCCTTCTGTTGTTTCTTATGAACTTAGCAACCATTGGCGTGGAAGTGCACCCTTTGGACTTCTTCACAAACTGTGGAAAAATTAGGTTTTACTGCTGGGACACTGCTGGGCAGGAGAAGTTCGGTGGTTTACGGGATGGCTACTAGTAAGTTAATAAATTGGGTCTCTTCTATTCTTTCGTATGTTATATGCTCCCAAGTTTAAATATTCCCAGTTGTACTTTGTTGTTGCACTAGCACATTTTCCTCGTTTCTGTAGGCAGCTTGTTTCCCTCTTGCAACAATGTTAAGTTTTATACTTTCTTTTTGTACATTTATTTGATCTGATAGATTATTTTATCTTTACAATCTTGTTATGCCTTGATAGTATTTTTTCCGGTGGTCCTTCATTTCTGTTAATTACTTTTCTGATTTCAATTTCCTCCTCTGATGAAGTTCCTTATTTGGTGTCTTAATTCATGATTGCAGCATCCATGGGCAATGTGCAATCATCATGTTTGATGTTACTGCTAGATTGACATACAAAAATGTTCCTACATGGCATCGTGATCTTTGCAGGTAATTTAACTTTTGTCTGTAGGAAACTGAATTGTTTCAACGTCAGGGCACTCTTCTTCAAGCTGCCTGCCATCTGATGACTTATTAACCTGCAGGGTGTGTGAGAATATTCCAATTGTTCTTTGTGGAAACAAGGTAGATGTGAAAAACAGGCAGGTTAAGGCCAAGCAAGTCACATTCCACAGGAAGAAGAACCTACAGTACTATGAAATATCTGCAAAGAGTAACTACAATTTTGAAAAACCATTCCTCTACTTGGCCAGGAAATTAGCTGGGTAAATCCATTTCCCGGTTCACTTTGTATTACATTTTTCTTTAATGTGGGAACTTTCATGACAATGGACTTCCTTTTGTTATGGCGATTCAGGGATGCAAACATTCATTTTGTTGAGTCTCCTGCCCTTGCTCCTCCAGAAGTACACATTGACTTGGCTGCCCAGCAACAGTGAGATTTTTGGATCAAGTCATTACTAATGAAACCATTCGCATTCTTTGGAGTAACCCATATCTATATGTTTATTTTCTGCAGGCATGAAGCTGAATTGGTAGCAGCTGCCAGTCAACCTCTTCCTGATGATGATGACGATGCTTTTGACTAAAACTGGTCGATCAACTGGTGATGTTGCCCTCTGCGTATCTATTTTAAGTGAGATCTTTTTTCTCCTTGCTAGGATTATTAGAAGGGAATAGTGCGCAGGGTATGGGTGAGGATTGAAACTTGAATTTTGAGAACGTTAGTGTTTTCTTCCTCCTGGATAAAAGAAATTTGTTGTGAATGTAGATGGTGGGTTTTTTTCTGTTGGTGAGATTCTCTATCGATTATAATAGAGCCACATGGCCTTTGTTGAAAGTTCATCATGCAGAAAATTTTCTAATGAGAGTGTTGCACTATTTGATTTGTGTTCATTGTTCCCTTGTTTCTTCTCTAGGGTTATCATTTGTTCCAGAAAAATGGGTTTAGTGAGGT

mRNA sequence

ACGAAAGAGAAAAACAACGATGGAGCGTGATTCCACTACGGATCCAACGGTCAGAAAAATAGCTTCATTTGAAAGCCAACTACAGCTTACTCTCTATAAACCCTCCTCTTCACCTCTCAAACCCCCATTTTAAACCTAAATCTATCGCCGATTTCTTCATCTCCCACTCCATTTTCAATTCGACGCTATCCTATGGCTTTGCCGGACCAGAAGACTGTTGATTATCCTAGTTTCAAGCTTGTCATTGTTGGTGATGGTGGCACTGGGAAAACCACATTTGTGAAAAGACATCTCACAGGGGAATTCGAAAAGAAATATGAACCAACCATTGGCGTGGAAGTGCACCCTTTGGACTTCTTCACAAACTGTGGAAAAATTAGGTTTTACTGCTGGGACACTGCTGGGCAGGAGAAGTTCGGTGGTTTACGGGATGGCTACTACATCCATGGGCAATGTGCAATCATCATGTTTGATGTTACTGCTAGATTGACATACAAAAATGTTCCTACATGGCATCGTGATCTTTGCAGGGTGTGTGAGAATATTCCAATTGTTCTTTGTGGAAACAAGGTAGATGTGAAAAACAGGCAGGTTAAGGCCAAGCAAGTCACATTCCACAGGAAGAAGAACCTACAGTACTATGAAATATCTGCAAAGAGTAACTACAATTTTGAAAAACCATTCCTCTACTTGGCCAGGAAATTAGCTGGGGATGCAAACATTCATTTTGTTGAGTCTCCTGCCCTTGCTCCTCCAGAAGTACACATTGACTTGGCTGCCCAGCAACAGCATGAAGCTGAATTGGTAGCAGCTGCCAGTCAACCTCTTCCTGATGATGATGACGATGCTTTTGACTAAAACTGGTCGATCAACTGGTGATGTTGCCCTCTGCGTATCTATTTTAAGTGAGATCTTTTTTCTCCTTGCTAGGATTATTAGAAGGGAATAGTGCGCAGGGTATGGGTGAGGATTGAAACTTGAATTTTGAGAACGTTAGTGTTTTCTTCCTCCTGGATAAAAGAAATTTGTTGTGAATGTAGATGGTGGGTTTTTTTCTGTTGGTGAGATTCTCTATCGATTATAATAGAGCCACATGGCCTTTGTTGAAAGTTCATCATGCAGAAAATTTTCTAATGAGAGTGTTGCACTATTTGATTTGTGTTCATTGTTCCCTTGTTTCTTCTCTAGGGTTATCATTTGTTCCAGAAAAATGGGTTTAGTGAGGT

Coding sequence (CDS)

ATGGCTTTGCCGGACCAGAAGACTGTTGATTATCCTAGTTTCAAGCTTGTCATTGTTGGTGATGGTGGCACTGGGAAAACCACATTTGTGAAAAGACATCTCACAGGGGAATTCGAAAAGAAATATGAACCAACCATTGGCGTGGAAGTGCACCCTTTGGACTTCTTCACAAACTGTGGAAAAATTAGGTTTTACTGCTGGGACACTGCTGGGCAGGAGAAGTTCGGTGGTTTACGGGATGGCTACTACATCCATGGGCAATGTGCAATCATCATGTTTGATGTTACTGCTAGATTGACATACAAAAATGTTCCTACATGGCATCGTGATCTTTGCAGGGTGTGTGAGAATATTCCAATTGTTCTTTGTGGAAACAAGGTAGATGTGAAAAACAGGCAGGTTAAGGCCAAGCAAGTCACATTCCACAGGAAGAAGAACCTACAGTACTATGAAATATCTGCAAAGAGTAACTACAATTTTGAAAAACCATTCCTCTACTTGGCCAGGAAATTAGCTGGGGATGCAAACATTCATTTTGTTGAGTCTCCTGCCCTTGCTCCTCCAGAAGTACACATTGACTTGGCTGCCCAGCAACAGCATGAAGCTGAATTGGTAGCAGCTGCCAGTCAACCTCTTCCTGATGATGATGACGATGCTTTTGACTAA

Protein sequence

MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPIVLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFVESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD

Homology

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BLAST of IVF0000170 vs. ExPASy Swiss-Prot
Match: Q8H156 (GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana OX=3702 GN=RAN3 PE=1 SV=2)

HSP 1 Score: 453.0 bits (1164), Expect = 2.0e-126
Identity = 214/221 (96.83%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDAN+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD 222
           ESPALAPPEV IDLAAQQQHEAEL AAASQPLPDDDDD F+
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]

BLAST of IVF0000170 vs. ExPASy Swiss-Prot
Match: P41917 (GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana OX=3702 GN=RAN2 PE=1 SV=3)

HSP 1 Score: 449.1 bits (1154), Expect = 2.8e-125
Identity = 210/221 (95.02%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD 222
           ESPALAPPEVH+D+AAQQQ+EA+L AAA+QPLPDDDDDAF+
Sbjct: 181 ESPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

[Close]

BLAST of IVF0000170 vs. ExPASy Swiss-Prot
Match: P41918 (GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum OX=4097 GN=RAN-A1 PE=2 SV=1)

HSP 1 Score: 448.4 bits (1152), Expect = 4.8e-125
Identity = 212/221 (95.93%), Postives = 215/221 (97.29%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP Q+ VDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPGQQAVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD 222
           ESPALAPPEV IDLAAQQQHEAEL AAASQPLPDDDD+ FD
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDETFD 221

[Close]

BLAST of IVF0000170 vs. ExPASy Swiss-Prot
Match: P38548 (GTP-binding nuclear protein Ran/TC4 OS=Vicia faba OX=3906 PE=2 SV=1)

HSP 1 Score: 444.5 bits (1142), Expect = 7.0e-124
Identity = 208/221 (94.12%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDAN+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD 222
           ESPALAPPEV ID+A QQ+HE E++ AA+QPLPDDDDDAF+
Sbjct: 181 ESPALAPPEVQIDIALQQRHENEILEAANQPLPDDDDDAFE 221

[Close]

BLAST of IVF0000170 vs. ExPASy Swiss-Prot
Match: P38546 (GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum OX=4081 GN=RAN1 PE=2 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 1.2e-123
Identity = 209/221 (94.57%), Postives = 215/221 (97.29%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDGNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD 222
           ESPALAPPEVHIDLAAQ  HE EL  AA+QPLPDDDD+AF+
Sbjct: 181 ESPALAPPEVHIDLAAQALHEEELQQAANQPLPDDDDEAFE 221

[Close]

BLAST of IVF0000170 vs. ExPASy TrEMBL
Match: A0A1S3CPD7 (GTP-binding nuclear protein OS=Cucumis melo OX=3656 GN=LOC103502727 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 1.8e-127
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD 222
           ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD 221

[Close]

BLAST of IVF0000170 vs. ExPASy TrEMBL
Match: A0A6J1CUI6 (GTP-binding nuclear protein OS=Momordica charantia OX=3673 GN=LOC111014404 PE=3 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 7.0e-127
Identity = 219/221 (99.10%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD 222
           ESPALAPPEVHIDLAAQQQHEAEL+AAASQPLPDDDDDAF+
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELIAAASQPLPDDDDDAFE 221

[Close]

BLAST of IVF0000170 vs. ExPASy TrEMBL
Match: A0A6J1CSP5 (GTP-binding nuclear protein OS=Momordica charantia OX=3673 GN=LOC111014403 PE=3 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 1.2e-126
Identity = 219/221 (99.10%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD 222
           ESPALAPPEVHIDLAAQQQHEAEL+AAASQPLPDDDDDAF+
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELLAAASQPLPDDDDDAFE 221

[Close]

BLAST of IVF0000170 vs. ExPASy TrEMBL
Match: A0A5A7TV42 (GTP-binding nuclear protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15G00300 PE=3 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 1.6e-126
Identity = 219/221 (99.10%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD 222
           ESPALAPPEVHIDLAAQQQHEAEL AAASQPLPDDDDDAF+
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 221

[Close]

BLAST of IVF0000170 vs. ExPASy TrEMBL
Match: A0A5A7TXX0 (GTP-binding nuclear protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00180 PE=3 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 1.6e-126
Identity = 219/221 (99.10%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 34  MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 93

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 94  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 153

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 154 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 213

Query: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD 222
           ESPALAPPEVHIDLAAQQQHEAEL AAASQPLPDDDDDAF+
Sbjct: 214 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAFE 254

[Close]

BLAST of IVF0000170 vs. NCBI nr
Match: XP_008465000.1 (PREDICTED: GTP-binding nuclear protein Ran-3-like [Cucumis melo])

HSP 1 Score: 462 bits (1190), Expect = 1.28e-164
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD 221
           ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD 221

[Close]

BLAST of IVF0000170 vs. NCBI nr
Match: XP_038879205.1 (GTP-binding nuclear protein Ran1B [Benincasa hispida])

HSP 1 Score: 461 bits (1185), Expect = 7.43e-164
Identity = 220/221 (99.55%), Postives = 220/221 (99.55%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD NIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDPNIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD 221
           ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD 221

[Close]

BLAST of IVF0000170 vs. NCBI nr
Match: XP_022144811.1 (GTP-binding nuclear protein Ran-3 [Momordica charantia])

HSP 1 Score: 461 bits (1185), Expect = 7.43e-164
Identity = 219/220 (99.55%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAF 220
           ESPALAPPEVHIDLAAQQQHEAEL+AAASQPLPDDDDDAF
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELIAAASQPLPDDDDDAF 220

[Close]

BLAST of IVF0000170 vs. NCBI nr
Match: XP_022144810.1 (GTP-binding nuclear protein Ran-3 [Momordica charantia])

HSP 1 Score: 460 bits (1183), Expect = 1.50e-163
Identity = 219/220 (99.55%), Postives = 220/220 (100.00%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAF 220
           ESPALAPPEVHIDLAAQQQHEAEL+AAASQPLPDDDDDAF
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELLAAASQPLPDDDDDAF 220

[Close]

BLAST of IVF0000170 vs. NCBI nr
Match: XP_008465002.1 (PREDICTED: GTP-binding nuclear protein Ran-3 [Cucumis melo] >XP_038879204.1 GTP-binding nuclear protein Ran-3 [Benincasa hispida] >KAA0046738.1 GTP-binding nuclear protein Ran-3 [Cucumis melo var. makuwa] >TYK14515.1 GTP-binding nuclear protein Ran-3 [Cucumis melo var. makuwa])

HSP 1 Score: 459 bits (1182), Expect = 2.13e-163
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAF 220
           ESPALAPPEVHIDLAAQQQHEAEL AAASQPLPDDDDDAF
Sbjct: 181 ESPALAPPEVHIDLAAQQQHEAELAAAASQPLPDDDDDAF 220

[Close]

BLAST of IVF0000170 vs. TAIR 10
Match: AT5G55190.1 (RAN GTPase 3 )

HSP 1 Score: 453.0 bits (1164), Expect = 1.4e-127
Identity = 214/221 (96.83%), Postives = 218/221 (98.64%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDAN+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD 222
           ESPALAPPEV IDLAAQQQHEAEL AAASQPLPDDDDD F+
Sbjct: 181 ESPALAPPEVQIDLAAQQQHEAELAAAASQPLPDDDDDTFE 221

[Close]

BLAST of IVF0000170 vs. TAIR 10
Match: AT5G20020.1 (RAS-related GTP-binding nuclear protein 2 )

HSP 1 Score: 449.1 bits (1154), Expect = 2.0e-126
Identity = 210/221 (95.02%), Postives = 219/221 (99.10%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD 222
           ESPALAPPEVH+D+AAQQQ+EA+L AAA+QPLPDDDDDAF+
Sbjct: 181 ESPALAPPEVHLDIAAQQQNEADLAAAAAQPLPDDDDDAFE 221

[Close]

BLAST of IVF0000170 vs. TAIR 10
Match: AT5G20010.1 (RAS-related nuclear protein-1 )

HSP 1 Score: 442.6 bits (1137), Expect = 1.9e-124
Identity = 207/221 (93.67%), Postives = 217/221 (98.19%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+TVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG
Sbjct: 1   MALPNQQTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI
Sbjct: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGD N+HFV
Sbjct: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDQNLHFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPLPDDDDDAFD 222
           E+PALAPPEVHID+A QQ++EAEL+ AA+QPLPDDDDD F+
Sbjct: 181 ETPALAPPEVHIDIADQQKNEAELLQAAAQPLPDDDDDIFE 221

[Close]

BLAST of IVF0000170 vs. TAIR 10
Match: AT5G55080.1 (ras-related nuclear protein 4 )

HSP 1 Score: 309.7 bits (792), Expect = 1.9e-84
Identity = 147/212 (69.34%), Postives = 173/212 (81.60%), Query Frame = 0


Query: 1   MALPDQKTVDYPSFKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCG 60
           MALP+Q+ VD P+FKL+IVGDGGTGKTTF+KRHLTGEFE   EPT+GV+++PLDFFTN G
Sbjct: 1   MALPNQQNVDLPTFKLLIVGDGGTGKTTFLKRHLTGEFEHNTEPTLGVDIYPLDFFTNRG 60

Query: 61  KIRFYCWDTAGQEKFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRVCENIPI 120
           KIRF CWDTAGQEK+ GL+D YYIHGQCAIIMFDVTAR TY N+  W+RDL RVC+NIPI
Sbjct: 61  KIRFECWDTAGQEKYSGLKDAYYIHGQCAIIMFDVTARHTYMNIDRWYRDLRRVCKNIPI 120

Query: 121 VLCGNKVDVKNRQVKAKQVTFHRKKNLQYYEISAKSNYNFEKPFLYLARKLAGDANIHFV 180
           VLCGNKVDV +RQ+K K V++HRKK LQYYE+SAK+N NFEKPFLYLAR++AGDA + FV
Sbjct: 121 VLCGNKVDVPSRQIKPKHVSYHRKKCLQYYEMSAKNNCNFEKPFLYLARRIAGDAKLSFV 180

Query: 181 ESPALAPPEVHIDLAAQQQHEAELVAAASQPL 213
           ES     PE  ID    +  +   V A +QPL
Sbjct: 181 ES-----PEAQIDNLDVESLQLLTVEAGTQPL 207

[Close]

BLAST of IVF0000170 vs. TAIR 10
Match: AT4G39890.1 (RAB GTPase homolog H1C )

HSP 1 Score: 105.1 bits (261), Expect = 7.1e-23
Identity = 60/164 (36.59%), Postives = 87/164 (53.05%), Query Frame = 0


Query: 14  FKLVIVGDGGTGKTTFVKRHLTGEFEKKYEPTIGVEVHPLDFFTNCGKIRFYCWDTAGQE 73
           FKLV +GD   GKT+ + R +  +F+  Y+PTIG++      +     +R   WDTAGQE
Sbjct: 10  FKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQE 69

Query: 74  KFGGLRDGYYIHGQCAIIMFDVTARLTYKNVPTWHRDLCRV--CENIPIVLCGNKVD-VK 133
           +F  L   Y      AI+++DV+ R T+ N   W  D+ R     N+ IVL GNK D V+
Sbjct: 70  RFRSLIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVE 129

Query: 134 NRQVKAKQVTFHRKK-NLQYYEISAKSNYNFEKPFLYLARKLAG 174
            RQV   +     K+  + + E SAK N+N +  F  +A  L G
Sbjct: 130 KRQVSISEGEDKGKEYGVMFIETSAKENFNIKALFRKIAAALPG 173

The following BLAST results are available for this feature:

BLAST of IVF0000170 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8H156	2.0e-126	96.83	GTP-binding nuclear protein Ran-3 OS=Arabidopsis thaliana OX=3702 GN=RAN3 PE=1 S...	[more]
P41917	2.8e-125	95.02	GTP-binding nuclear protein Ran-2 OS=Arabidopsis thaliana OX=3702 GN=RAN2 PE=1 S...	[more]
P41918	4.8e-125	95.93	GTP-binding nuclear protein Ran-A1 OS=Nicotiana tabacum OX=4097 GN=RAN-A1 PE=2 S...	[more]
P38548	7.0e-124	94.12	GTP-binding nuclear protein Ran/TC4 OS=Vicia faba OX=3906 PE=2 SV=1	[more]
P38546	1.2e-123	94.57	GTP-binding nuclear protein Ran1 OS=Solanum lycopersicum OX=4081 GN=RAN1 PE=2 SV...	[more]

BLAST of IVF0000170 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CPD7	1.8e-127	100.00	GTP-binding nuclear protein OS=Cucumis melo OX=3656 GN=LOC103502727 PE=3 SV=1	[more]
A0A6J1CUI6	7.0e-127	99.10	GTP-binding nuclear protein OS=Momordica charantia OX=3673 GN=LOC111014404 PE=3 ...	[more]
A0A6J1CSP5	1.2e-126	99.10	GTP-binding nuclear protein OS=Momordica charantia OX=3673 GN=LOC111014403 PE=3 ...	[more]
A0A5A7TV42	1.6e-126	99.10	GTP-binding nuclear protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaf...	[more]
A0A5A7TXX0	1.6e-126	99.10	GTP-binding nuclear protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]

BLAST of IVF0000170 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008465000.1	1.28e-164	100.00	PREDICTED: GTP-binding nuclear protein Ran-3-like [Cucumis melo]	[more]
XP_038879205.1	7.43e-164	99.55	GTP-binding nuclear protein Ran1B [Benincasa hispida]	[more]
XP_022144811.1	7.43e-164	99.55	GTP-binding nuclear protein Ran-3 [Momordica charantia]	[more]
XP_022144810.1	1.50e-163	99.55	GTP-binding nuclear protein Ran-3 [Momordica charantia]	[more]
XP_008465002.1	2.13e-163	99.55	PREDICTED: GTP-binding nuclear protein Ran-3 [Cucumis melo] >XP_038879204.1 GTP-...	[more]

BLAST of IVF0000170 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55190.1	1.4e-127	96.83	RAN GTPase 3	[more]
AT5G20020.1	2.0e-126	95.02	RAS-related GTP-binding nuclear protein 2	[more]
AT5G20010.1	1.9e-124	93.67	RAS-related nuclear protein-1	[more]
AT5G55080.1	1.9e-84	69.34	ras-related nuclear protein 4	[more]
AT4G39890.1	7.1e-23	36.59	RAB GTPase homolog H1C	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (IVF77) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002041	Ran GTPase	PRINTS	PR00627	GTPRANTC4	coord: 74..92 score: 89.88 coord: 94..115 score: 86.19 coord: 130..148 score: 81.38 coord: 168..190 score: 74.92 coord: 27..41 score: 95.13
IPR002041	Ran GTPase	PANTHER	PTHR24071	RAN GTPASE	coord: 1..221
IPR002041	Ran GTPase	PROSITE	PS51418	RAN	coord: 7..171 score: 30.014019
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..174 e-value: 5.8E-18 score: 75.7
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..174 e-value: 2.0E-27 score: 107.1
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..220 e-value: 1.3E-166 score: 569.5
None	No IPR available	PANTHER	PTHR24071:SF19	GTP-BINDING NUCLEAR PROTEIN	coord: 1..221
None	No IPR available	PROSITE	PS51419	RAB	coord: 8..221 score: 19.452553
None	No IPR available	CDD	cd00877	Ran	coord: 14..179 e-value: 8.94628E-133 score: 368.167
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..170 e-value: 1.2E-8 score: -8.0
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..171 e-value: 5.1E-50 score: 169.2
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 5..206 score: 9.82458
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 14..164 e-value: 7.2E-25 score: 85.6
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 4..219 e-value: 2.0E-68 score: 231.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 14..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
IVF0000170.1	IVF0000170.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006606	protein import into nucleus
biological_process	GO:0000054	ribosomal subunit export from nucleus
biological_process	GO:0006913	nucleocytoplasmic transport
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding