HG10023493 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTGTAAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCATCGAAAGGCATGATGCTGCCAGAAAGCGCAGGAGATCTTTTGATCTCTGTTTTTCGTACCCAGAGCTACCAATGGAACGTGGAAAGTCTTTGAAAGATATGGATTCAGCAAAGTTGAAGACTGGAATCAAGAAATGGGCTAAAGCCGTGGTGACTTATGCCCGCACAGTAAGCAATCGCTTTGGAAGCTGGCGTCACTAA ATGTCTGTAAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCATCGAAAGGCATGATGCTGCCAGAAAGCGCAGGAGATCTTTTGATCTCTGTTTTTCGTACCCAGAGCTACCAATGGAACGTGGAAAGTCTTTGAAAGATATGGATTCAGCAAAGTTGAAGACTGGAATCAAGAAATGGGCTAAAGCCGTGGTGACTTATGCCCGCACAGTAAGCAATCGCTTTGGAAGCTGGCGTCACTAA ATGTCTGTAAAGAAGTCTCTCTCTCTAACAAAGGCCGAGGAGGCCAAGCGCATCGAAAGGCATGATGCTGCCAGAAAGCGCAGGAGATCTTTTGATCTCTGTTTTTCGTACCCAGAGCTACCAATGGAACGTGGAAAGTCTTTGAAAGATATGGATTCAGCAAAGTTGAAGACTGGAATCAAGAAATGGGCTAAAGCCGTGGTGACTTATGCCCGCACAGTAAGCAATCGCTTTGGAAGCTGGCGTCACTAA MSVKKSLSLTKAEEAKRIERHDAARKRRRSFDLCFSYPELPMERGKSLKDMDSAKLKTGIKKWAKAVVTYARTVSNRFGSWRH Homology
BLAST of HG10023493 vs. NCBI nr
Match: KAA0059447.1 (hypothetical protein E6C27_scaffold242G001750 [Cucumis melo var. makuwa] >TYK03877.1 hypothetical protein E5676_scaffold347G00720 [Cucumis melo var. makuwa]) HSP 1 Score: 142.9 bits (359), Expect = 1.2e-30 Identity = 73/82 (89.02%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of HG10023493 vs. NCBI nr
Match: KGN45542.1 (hypothetical protein Csa_016865 [Cucumis sativus]) HSP 1 Score: 142.1 bits (357), Expect = 2.1e-30 Identity = 72/82 (87.80%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of HG10023493 vs. NCBI nr
Match: KAG6593505.1 (hypothetical protein SDJN03_12981, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 136.0 bits (341), Expect = 1.5e-28 Identity = 69/82 (84.15%), Postives = 75/82 (91.46%), Query Frame = 0
BLAST of HG10023493 vs. NCBI nr
Match: KAG6575488.1 (hypothetical protein SDJN03_26127, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 135.6 bits (340), Expect = 2.0e-28 Identity = 71/83 (85.54%), Postives = 73/83 (87.95%), Query Frame = 0
BLAST of HG10023493 vs. NCBI nr
Match: PON96105.1 (hypothetical protein TorRG33x02_080350 [Trema orientale]) HSP 1 Score: 85.5 bits (210), Expect = 2.4e-13 Identity = 49/82 (59.76%), Postives = 57/82 (69.51%), Query Frame = 0
BLAST of HG10023493 vs. ExPASy TrEMBL
Match: A0A5A7UXU0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G00720 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 6.0e-31 Identity = 73/82 (89.02%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of HG10023493 vs. ExPASy TrEMBL
Match: A0A0A0KB03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G451980 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 1.0e-30 Identity = 72/82 (87.80%), Postives = 78/82 (95.12%), Query Frame = 0
BLAST of HG10023493 vs. ExPASy TrEMBL
Match: A0A2P5FE88 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_080350 PE=4 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 1.1e-13 Identity = 49/82 (59.76%), Postives = 57/82 (69.51%), Query Frame = 0
BLAST of HG10023493 vs. ExPASy TrEMBL
Match: B9GH52 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G194100 PE=4 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 3.3e-13 Identity = 47/82 (57.32%), Postives = 60/82 (73.17%), Query Frame = 0
BLAST of HG10023493 vs. ExPASy TrEMBL
Match: A0A2N9HT47 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS43080 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 4.3e-13 Identity = 50/82 (60.98%), Postives = 59/82 (71.95%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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