
HG10023448 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAAGCAATCTCCTTCTCCATACCATTGTTCCCACTCCCTTCACCGAACTGAATCCAATTCTCAAATGGCGGAATTCCACTCCGCTCATCCTCATCTCCAGAAGGCACGAACGGTTTCGTTGCTTAGCCAAGAAGAAGATCGGATTCATGGATCAAATTCTTGATTACATTGAAGGTGCGCTTCGAATTCCCCACAAACAAATTCGAAGGCGGAAAAATCTTCTGTTTCATGATTTTTTTAGTTTTATGATATTCTTTTTAGTTACTCTTACTGTTGTCTTTTGATTTTAGGCGGTCCGAAGTTAAGGAAATGGTATGGGGCGCCTGACCTTGTTTCTAAAGATGAATCTGCACTTAAAAACGAGGATGAATATTCTGGTAATGTGTATAGGAAATACCTGTTCAGTTCGTCTTATTATTGTTATTATTGTTTTGGGGTTGAGTTTGTTTCTTTAGTACAGATGAAGGTACGATCAGGGATGCAATTTTGGTGACTGATGGGGATACTGAGATCGGTCAGGTGTGTTTCCTTTTTTGCATTATAATTTTTCCATTGAACTCGATTGGTATGGAAATGAAGATATGAACTATGTGATTTATGGCTAGCCCAATAGAAAGACTATTTCGTTTCTGTAAGTAACTGCTTGGTAGCTGCCTTTTCAAACTATCAGGTGTGATATGTGATCAACTACTGAATCCAAGTGATATCTACCTAATGCAGATGGTGATATTATCGTTGATTGTGAAAAAAGCCAGAGTCAAAGCGTTGGTGAAGGATAAGCAAGCTGCTCTTGAAGCTTTTGGATTATATGTTGAGGTGGGTGGATTCAGATTATAGGATCACTACTTGCAGAATCTAGATAGTATGCTACATTTGATGTTAATTCCATGTCTTCTGCGTTTTCTTTCTTCCCCATCTTAAATGAACTATTGGTTTTTTTGGTTCTGAATTCATGTGCAAAGCCAGTAGCCGGTGATATCAGAGATGAGCCATCATTGAAGAAAGCTCTAAGAGAAGTTCGCACTATAATATGCCCAAAAGTATGGACATTCAATTTCGATCTGTTATTATTTTCCCCTAAATTTTTCCTCTAGCTTTTATTTGAAAATGCTCGAGACAACATGATATATCATTTTTTTAATGTTACCATCAACTATAATGCACCTTTAGATTTCTGACATCATGGCATTCAATCTTATTTTTCTTGAAATAATATTTAGGAGGAAACAAGTGGCATAGAGATAGAAGTCGACTTAGCGATGAACATGGATATAAGGTGTAGAACGTGTGAATGAAATATCAACCATTTCATAGAGGTTCCATTATAAATACGTGAAAGATAAGCATTCACATGTGATGGGCAGTTAACTGCTGCAAATTCTGGGTCATTTTACGTTGCTGGATTAATTCCTTCCTGGATTTTCCACTATCAGGAGAATTAATGATATGGATATAACTTATAAGTTTCACGTTTAGTCTCTAGGAGCATGAGCATGTATTTGAACTCCTTAAGTTCAAACTTTCACGTAAATATATTGAGCCTTATTAAAGGGATGTATGATGGTTATTGACACATCAGGTTTATTAATAATCATATCACCAGGAAGGTTTCTTATCCAATGCTGCAAGCCTGAAAGGGGTGCAACATATAGTTCTCTTATCTCAGGTATACTTCCAGCTCCCTGTCCTTCCTCTAGTCTCTTTGGCATACATAAATATACTGAAAACCAATATTGTGTTGGTATGAACATGGCCAGAACCAATCCTTCAATCTATATTCATTGTCTAGACTTAATAAGGTTGCAGTTATCCAATTATAGAAGTGCCAGTGGTGTCCAAGCTCTTCTTAAAGGCAATGCAAAAAAACTGGCTGAGCAAGATGAAGCAGTTCTAGTGGCATCAGGAATTCCTTATACCATAATACGAGCTGGCTTGTTGCAAGATACACCTGGTGGGAATCAAGGATTCAGCTTTGAAGAGGTTATTCTTCTGTCTTAAATGCTCCTCTATTAACAGCTAACTTATCCAAACATAACTGGTTTATTTATTGTTTTTTTAAGGGAGTGTACGGAACTTGATTGAGAATTGAGGTGGGATACCTTATTAATTTTTGCATATAATGAATCGTTGTATTGCGTATTCGGTGCTATTTTTCAGGGTTGTGCAACTACGGGATCTCTCAGCAAGGAGGATGCCGCCTTCATTTGTGTTGAGGCTACTGATGTGATTCCTAAAGGAGGATTCGCATTTGAGGTTGGTAAACTTAAATCTTTATGCCGAACGCCTAGGATTGTTTTTGATAAATTGCATTACGCTTTAAAATCTGAGGTAAGGCATCCAGTACTTGTGAGATAGAACTGATTAAGGGTAAATTTGAGAGGGCTTTTGCAATGATGAAAAGTATTTCGAGTCTCATGAAAGCACTTTTCAAAGTTGTTATAGGTTAAACATAGCAGTCATAACTACGGTAAATAGTAAACGGTTTGGAGGGAATGAGTTCAAACCATATTGGTCATCTACCTAAGATCTAAGATTCTTTTTTTTTTTTTTTTTTTTTTTTTTTGGTACAATAGGGGTAAGGGATTCAAATCACATACCTCGTGGTCACTAGCACCTCGTGGTCTCTAGTATAATATCCTACTAGTAGTTTGGACATACAATCAAGTTGGTATTCTACGAGATAGTCAAAGTGTGTGTAAGTTGACTTAACACTTACATATATATCAATGAAGAAAATGATAGCATTGGGATGACAAAAAATGATTTTGAAAATTCTAAAGCTGTTTAAAGTACTAAGTAAAAAAAAAAAATGCAAAATGAGAAGTATTTCATTTGAAAATACTCTTTTCAAAAGTCCATCCAAACTCACTCACATTGAAATATAAAATAGAAATCTAAATGGGGTTGTGCAAGATATTGACCTTGAACAGATCCAATGGTTCAAATAGTTTATTTTCTGCTATATCTGTCCTGACTACATTGTAATCTCAAACTTTGTGTTCCTTGTATGTCACAACAGGTAGCCAATGGAAATGAACAAGTTTCAGATTGGAAAGGGAGCTTGACAAGATTACTGGAGAAAACAGAGCAGCCTCAATGA ATGGTAAGCAATCTCCTTCTCCATACCATTGTTCCCACTCCCTTCACCGAACTGAATCCAATTCTCAAATGGCGGAATTCCACTCCGCTCATCCTCATCTCCAGAAGGCACGAACGGTTTCGTTGCTTAGCCAAGAAGAAGATCGGATTCATGGATCAAATTCTTGATTACATTGAAGGCGGTCCGAAGTTAAGGAAATGGTATGGGGCGCCTGACCTTGTTTCTAAAGATGAATCTGCACTTAAAAACGAGGATGAATATTCTGATGAAGGTACGATCAGGGATGCAATTTTGGTGACTGATGGGGATACTGAGATCGGTCAGATGGTGATATTATCGTTGATTGTGAAAAAAGCCAGAGTCAAAGCGTTGGTGAAGGATAAGCAAGCTGCTCTTGAAGCTTTTGGATTATATGTTGAGCCAGTAGCCGGTGATATCAGAGATGAGCCATCATTGAAGAAAGCTCTAAGAGAAGTTCGCACTATAATATGCCCAAAAGAGGAAACAAGTGGCATAGAGATAGAAGTCGACTTAGCGATGAACATGGATATAAGAAGTGCCAGTGGTGTCCAAGCTCTTCTTAAAGGCAATGCAAAAAAACTGGCTGAGCAAGATGAAGCAGTTCTAGTGGCATCAGGAATTCCTTATACCATAATACGAGCTGGCTTGTTGCAAGATACACCTGGTGGGAATCAAGGATTCAGCTTTGAAGAGGGTTGTGCAACTACGGGATCTCTCAGCAAGGAGGATGCCGCCTTCATTTGTGTTGAGGCTACTGATGTGATTCCTAAAGGAGGATTCGCATTTGAGGTAGCCAATGGAAATGAACAAGTTTCAGATTGGAAAGGGAGCTTGACAAGATTACTGGAGAAAACAGAGCAGCCTCAATGA ATGGTAAGCAATCTCCTTCTCCATACCATTGTTCCCACTCCCTTCACCGAACTGAATCCAATTCTCAAATGGCGGAATTCCACTCCGCTCATCCTCATCTCCAGAAGGCACGAACGGTTTCGTTGCTTAGCCAAGAAGAAGATCGGATTCATGGATCAAATTCTTGATTACATTGAAGGCGGTCCGAAGTTAAGGAAATGGTATGGGGCGCCTGACCTTGTTTCTAAAGATGAATCTGCACTTAAAAACGAGGATGAATATTCTGATGAAGGTACGATCAGGGATGCAATTTTGGTGACTGATGGGGATACTGAGATCGGTCAGATGGTGATATTATCGTTGATTGTGAAAAAAGCCAGAGTCAAAGCGTTGGTGAAGGATAAGCAAGCTGCTCTTGAAGCTTTTGGATTATATGTTGAGCCAGTAGCCGGTGATATCAGAGATGAGCCATCATTGAAGAAAGCTCTAAGAGAAGTTCGCACTATAATATGCCCAAAAGAGGAAACAAGTGGCATAGAGATAGAAGTCGACTTAGCGATGAACATGGATATAAGAAGTGCCAGTGGTGTCCAAGCTCTTCTTAAAGGCAATGCAAAAAAACTGGCTGAGCAAGATGAAGCAGTTCTAGTGGCATCAGGAATTCCTTATACCATAATACGAGCTGGCTTGTTGCAAGATACACCTGGTGGGAATCAAGGATTCAGCTTTGAAGAGGGTTGTGCAACTACGGGATCTCTCAGCAAGGAGGATGCCGCCTTCATTTGTGTTGAGGCTACTGATGTGATTCCTAAAGGAGGATTCGCATTTGAGGTAGCCAATGGAAATGAACAAGTTTCAGATTGGAAAGGGAGCTTGACAAGATTACTGGAGAAAACAGAGCAGCCTCAATGA MVSNLLLHTIVPTPFTELNPILKWRNSTPLILISRRHERFRCLAKKKIGFMDQILDYIEGGPKLRKWYGAPDLVSKDESALKNEDEYSDEGTIRDAILVTDGDTEIGQMVILSLIVKKARVKALVKDKQAALEAFGLYVEPVAGDIRDEPSLKKALREVRTIICPKEETSGIEIEVDLAMNMDIRSASGVQALLKGNAKKLAEQDEAVLVASGIPYTIIRAGLLQDTPGGNQGFSFEEGCATTGSLSKEDAAFICVEATDVIPKGGFAFEVANGNEQVSDWKGSLTRLLEKTEQPQ Homology
BLAST of HG10023448 vs. NCBI nr
Match: XP_038896427.1 (uncharacterized protein LOC120084693 isoform X1 [Benincasa hispida]) HSP 1 Score: 511.1 bits (1315), Expect = 6.2e-141 Identity = 266/303 (87.79%), Postives = 279/303 (92.08%), Query Frame = 0
BLAST of HG10023448 vs. NCBI nr
Match: XP_038896428.1 (uncharacterized protein LOC120084693 isoform X2 [Benincasa hispida]) HSP 1 Score: 504.2 bits (1297), Expect = 7.6e-139 Identity = 262/296 (88.51%), Postives = 272/296 (91.89%), Query Frame = 0
BLAST of HG10023448 vs. NCBI nr
Match: KAA0059404.1 (uncharacterized protein E6C27_scaffold242G001300 [Cucumis melo var. makuwa] >TYK03923.1 uncharacterized protein E5676_scaffold347G001200 [Cucumis melo var. makuwa]) HSP 1 Score: 488.4 bits (1256), Expect = 4.3e-134 Identity = 255/303 (84.16%), Postives = 271/303 (89.44%), Query Frame = 0
BLAST of HG10023448 vs. NCBI nr
Match: XP_011659627.1 (uncharacterized protein At5g02240 [Cucumis sativus] >KGN45495.1 hypothetical protein Csa_016471 [Cucumis sativus]) HSP 1 Score: 487.3 bits (1253), Expect = 9.6e-134 Identity = 255/303 (84.16%), Postives = 272/303 (89.77%), Query Frame = 0
BLAST of HG10023448 vs. NCBI nr
Match: XP_008462315.1 (PREDICTED: uncharacterized protein At2g37660, chloroplastic [Cucumis melo]) HSP 1 Score: 486.9 bits (1252), Expect = 1.3e-133 Identity = 254/303 (83.83%), Postives = 270/303 (89.11%), Query Frame = 0
BLAST of HG10023448 vs. ExPASy Swiss-Prot
Match: Q8W4D6 (Protein HIGH CHLOROPHYLL FLUORESCENCE PHENOTYPE 173, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HCF173 PE=1 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 6.7e-05 Identity = 28/73 (38.36%), Postives = 40/73 (54.79%), Query Frame = 0
BLAST of HG10023448 vs. ExPASy TrEMBL
Match: A0A5A7UWE4 (NAD(P)-bd_dom domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001200 PE=4 SV=1) HSP 1 Score: 488.4 bits (1256), Expect = 2.1e-134 Identity = 255/303 (84.16%), Postives = 271/303 (89.44%), Query Frame = 0
BLAST of HG10023448 vs. ExPASy TrEMBL
Match: A0A0A0K736 (NAD(P)-bd_dom domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G450540 PE=4 SV=1) HSP 1 Score: 487.3 bits (1253), Expect = 4.6e-134 Identity = 255/303 (84.16%), Postives = 272/303 (89.77%), Query Frame = 0
BLAST of HG10023448 vs. ExPASy TrEMBL
Match: A0A1S3CGP5 (uncharacterized protein At2g37660, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103500698 PE=4 SV=1) HSP 1 Score: 486.9 bits (1252), Expect = 6.1e-134 Identity = 254/303 (83.83%), Postives = 270/303 (89.11%), Query Frame = 0
BLAST of HG10023448 vs. ExPASy TrEMBL
Match: A0A6J1D3X2 (uncharacterized protein At5g02240 OS=Momordica charantia OX=3673 GN=LOC111017032 PE=4 SV=1) HSP 1 Score: 477.2 bits (1227), Expect = 4.8e-131 Identity = 240/303 (79.21%), Postives = 267/303 (88.12%), Query Frame = 0
BLAST of HG10023448 vs. ExPASy TrEMBL
Match: A0A6J1KE28 (uncharacterized protein At2g37660, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111494837 PE=4 SV=1) HSP 1 Score: 471.5 bits (1212), Expect = 2.6e-129 Identity = 243/303 (80.20%), Postives = 261/303 (86.14%), Query Frame = 0
BLAST of HG10023448 vs. TAIR 10
Match: AT1G72640.2 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 272.3 bits (695), Expect = 4.5e-73 Identity = 143/263 (54.37%), Postives = 180/263 (68.44%), Query Frame = 0
BLAST of HG10023448 vs. TAIR 10
Match: AT1G72640.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 270.4 bits (690), Expect = 1.7e-72 Identity = 143/264 (54.17%), Postives = 179/264 (67.80%), Query Frame = 0
BLAST of HG10023448 vs. TAIR 10
Match: AT1G16720.1 (high chlorophyll fluorescence phenotype 173 ) HSP 1 Score: 49.7 bits (117), Expect = 4.8e-06 Identity = 28/73 (38.36%), Postives = 40/73 (54.79%), Query Frame = 0
BLAST of HG10023448 vs. TAIR 10
Match: AT4G31530.1 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 48.9 bits (115), Expect = 8.1e-06 Identity = 63/256 (24.61%), Postives = 102/256 (39.84%), Query Frame = 0
BLAST of HG10023448 vs. TAIR 10
Match: AT4G31530.2 (NAD(P)-binding Rossmann-fold superfamily protein ) HSP 1 Score: 48.9 bits (115), Expect = 8.1e-06 Identity = 59/243 (24.28%), Postives = 98/243 (40.33%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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