HG10023437 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10023437
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Subtilase family protein
Location	Chr05: 34205912 .. 34206253 (+)
RNA-Seq Expression	HG10023437
Synteny	HG10023437

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCACTTTTACGAATCTCAGCCGGAAGACAAGGCCCAAACCCAATCCCTTCTCCGCTCCGGCCACCGTCGGCCATCATGCCGGTGGAGCCTTCTGCGGCGGAAGAAGCTGCCGACGGCCCGCCTGGGGGGCAGAAAGCCGCCGAAAACGGTGGCGATTTGGAGGTCAATTAAAGAAATTAGAATGAGAAAGTGGGTGATGAAGGTCCGAGGGGATTGTATGGTGACGAAGCTGAATCAATTGTTAGGCAAAGACATTGTTGGTTTCGATGCTTTTTTGAAAAGGATTCTAATGGAGATTTCTTTGGCTGTTCCTCTTCTTGGTGCATCTCCGGCTTAA

mRNA sequence

ATGGCTCACTTTTACGAATCTCAGCCGGAAGACAAGGCCCAAACCCAATCCCTTCTCCGCTCCGGCCACCGTCGGCCATCATGCCGGTGGAGCCTTCTGCGGCGGAAGAAGCTGCCGACGGCCCGCCTGGGGGGCAGAAAGCCGCCGAAAACGGTGGCGATTTGGAGGTCAATTAAAGAAATTAGAATGAGAAAGTGGGTGATGAAGGTCCGAGGGGATTGTATGGTGACGAAGCTGAATCAATTGTTAGGCAAAGACATTGTTGGTTTCGATGCTTTTTTGAAAAGGATTCTAATGGAGATTTCTTTGGCTGTTCCTCTTCTTGGTGCATCTCCGGCTTAA

Coding sequence (CDS)

ATGGCTCACTTTTACGAATCTCAGCCGGAAGACAAGGCCCAAACCCAATCCCTTCTCCGCTCCGGCCACCGTCGGCCATCATGCCGGTGGAGCCTTCTGCGGCGGAAGAAGCTGCCGACGGCCCGCCTGGGGGGCAGAAAGCCGCCGAAAACGGTGGCGATTTGGAGGTCAATTAAAGAAATTAGAATGAGAAAGTGGGTGATGAAGGTCCGAGGGGATTGTATGGTGACGAAGCTGAATCAATTGTTAGGCAAAGACATTGTTGGTTTCGATGCTTTTTTGAAAAGGATTCTAATGGAGATTTCTTTGGCTGTTCCTCTTCTTGGTGCATCTCCGGCTTAA

Protein sequence

MAHFYESQPEDKAQTQSLLRSGHRRPSCRWSLLRRKKLPTARLGGRKPPKTVAIWRSIKEIRMRKWVMKVRGDCMVTKLNQLLGKDIVGFDAFLKRILMEISLAVPLLGASPA

Homology

[Close]

BLAST of HG10023437 vs. NCBI nr
Match: KAG7013982.1 (hypothetical protein SDJN02_24152, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 142.9 bits (359), Expect = 1.7e-30
Identity = 75/111 (67.57%), Postives = 87/111 (78.38%), Query Frame = 0


Query: 1   MAHFYESQPEDKAQTQSLLRSGHRRPSCRWSLLRRKKLPTARLGGRKPPKTVAIWRSIKE 60
           MA  YESQ +D+A  Q LL SGHRRP  RW  LRRKKL TARLGGR+PP+   IWRSI++
Sbjct: 1   MAQSYESQLQDEA--QPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRK 60

Query: 61  IRMRKWVMKVRGDCMVTKLNQLLGKDIVGFDAFLKRILMEISLAVPLLGAS 112
           +RMRKW+MKVR DC V K+N+L  KD  GF+ FLKRILMEIS AVP+LGAS
Sbjct: 61  VRMRKWLMKVRCDCKVKKINELFDKDNGGFNGFLKRILMEISSAVPVLGAS 109

[Close]

BLAST of HG10023437 vs. NCBI nr
Match: KAG6575440.1 (hypothetical protein SDJN03_26079, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 142.9 bits (359), Expect = 1.7e-30
Identity = 75/111 (67.57%), Postives = 87/111 (78.38%), Query Frame = 0


Query: 1   MAHFYESQPEDKAQTQSLLRSGHRRPSCRWSLLRRKKLPTARLGGRKPPKTVAIWRSIKE 60
           MA  YESQ +D+A  Q LL SGHRRP  RW  LRRKKL TARLGGR+PP+   IWRSI++
Sbjct: 1   MAQSYESQLQDEA--QPLLLSGHRRPLRRWIHLRRKKLSTARLGGRRPPRAAVIWRSIRK 60

Query: 61  IRMRKWVMKVRGDCMVTKLNQLLGKDIVGFDAFLKRILMEISLAVPLLGAS 112
           +RMRKW+MKVR DC V K+N+L  KD  GF+ FLKRILMEIS AVP+LGAS
Sbjct: 61  VRMRKWLMKVRCDCKVKKMNELFDKDNGGFNGFLKRILMEISSAVPVLGAS 109

[Close]

BLAST of HG10023437 vs. NCBI nr
Match: KAG6593556.1 (hypothetical protein SDJN03_13032, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 131.0 bits (328), Expect = 6.7e-27
Identity = 75/120 (62.50%), Postives = 85/120 (70.83%), Query Frame = 0


Query: 1   MAHFYESQPEDKAQTQSLLRSGHRRPSCRWSLLRRKKLPTARLGGRKPPKTVAIWRSIKE 60
           MA  +ESQP+D+A  QSLL S HRRP  RW  LRRK+LP  RLGG +PP+  A WRS   
Sbjct: 1   MAQSHESQPKDEA--QSLLHSSHRRPHRRWIHLRRKRLPIVRLGGERPPRAAAHWRS--- 60

Query: 61  IRMRKWVMKVRGDCMVTKLNQLLGKDI-------VGFDAFLKRILMEISLAVPLLGASPA 114
           IR RKW+MK+R DC+V KL QL GK          GFDAFLKRILMEISLAVP+LGAS A
Sbjct: 61  IRFRKWLMKIRCDCLVKKLKQLFGKGTGSGGDGGGGFDAFLKRILMEISLAVPVLGASLA 115

[Close]

BLAST of HG10023437 vs. NCBI nr
Match: KAE8646502.1 (hypothetical protein Csa_015773 [Cucumis sativus])

HSP 1 Score: 129.4 bits (324), Expect = 1.9e-26
Identity = 69/105 (65.71%), Postives = 83/105 (79.05%), Query Frame = 0


Query: 5   YESQPEDKAQTQSLLRSGHRRPSCRWSLLRRKKLPTARLGGRKPPKTVAIWRSIKEIRMR 64
           YE + ED+A  +SLLRSG+RRPS RW LLRRKKLPTARLGGR+PP+T AIWRSIKEI+MR
Sbjct: 6   YELEAEDEA--KSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEIKMR 65

Query: 65  KWVMKVRGDCMVTKLNQLLGKDIVGFDAFLKRILMEISLAVPLLG 110
           KW M        T  N++  KDI  F+AFL++IL+EISLA+PLLG
Sbjct: 66  KWAM--------TMTNKVRCKDIASFNAFLRKILLEISLAIPLLG 100

[Close]

BLAST of HG10023437 vs. NCBI nr
Match: KAA0059393.1 (hypothetical protein E6C27_scaffold242G001190 [Cucumis melo var. makuwa] >TYK03934.1 hypothetical protein E5676_scaffold347G001310 [Cucumis melo var. makuwa])

HSP 1 Score: 128.6 bits (322), Expect = 3.3e-26
Identity = 74/115 (64.35%), Postives = 87/115 (75.65%), Query Frame = 0


Query: 1   MAHFYESQPEDKAQTQSLLRSGHRRPSCRWSLLRRKKLPTARLGGRKPPKTVAIWRSIKE 60
           M   Y+ + +D+A  +SLLRSG+RRPS RW LLRRKKLPTARLGGR+PP+TVAIWRSIKE
Sbjct: 1   MRESYKLEAQDEA--KSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKE 60

Query: 61  IRMRKW----VMKVRGDCMVTKLNQLLGKDIVGFDAFLKRILMEISLAVPLLGAS 112
           I+MRKW     MKVR  C          KDI GF+AFLK+IL+EISLA+PLLG S
Sbjct: 61  IKMRKWAAMMTMKVR--C----------KDIAGFNAFLKKILLEISLAIPLLGVS 101

[Close]

BLAST of HG10023437 vs. ExPASy TrEMBL
Match: A0A0A0KCH4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448920 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 3.2e-27
Identity = 70/107 (65.42%), Postives = 84/107 (78.50%), Query Frame = 0


Query: 5   YESQPEDKAQTQSLLRSGHRRPSCRWSLLRRKKLPTARLGGRKPPKTVAIWRSIKEIRMR 64
           YE + ED+A  +SLLRSG+RRPS RW LLRRKKLPTARLGGR+PP+T AIWRSIKEI+MR
Sbjct: 6   YELEAEDEA--KSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTAAIWRSIKEIKMR 65

Query: 65  KWVMKVRGDCMVTKLNQLLGKDIVGFDAFLKRILMEISLAVPLLGAS 112
           KW M        T  N++  KDI  F+AFL++IL+EISLA+PLLG S
Sbjct: 66  KWAM--------TMTNKVRCKDIASFNAFLRKILLEISLAIPLLGVS 102

[Close]

BLAST of HG10023437 vs. ExPASy TrEMBL
Match: A0A5A7UTZ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001310 PE=4 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.6e-26
Identity = 74/115 (64.35%), Postives = 87/115 (75.65%), Query Frame = 0


Query: 1   MAHFYESQPEDKAQTQSLLRSGHRRPSCRWSLLRRKKLPTARLGGRKPPKTVAIWRSIKE 60
           M   Y+ + +D+A  +SLLRSG+RRPS RW LLRRKKLPTARLGGR+PP+TVAIWRSIKE
Sbjct: 1   MRESYKLEAQDEA--KSLLRSGYRRPSRRWILLRRKKLPTARLGGRRPPRTVAIWRSIKE 60

Query: 61  IRMRKW----VMKVRGDCMVTKLNQLLGKDIVGFDAFLKRILMEISLAVPLLGAS 112
           I+MRKW     MKVR  C          KDI GF+AFLK+IL+EISLA+PLLG S
Sbjct: 61  IKMRKWAAMMTMKVR--C----------KDIAGFNAFLKKILLEISLAIPLLGVS 101

[Close]

BLAST of HG10023437 vs. ExPASy TrEMBL
Match: A0A5N6QI76 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_003523 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.2e-07
Identity = 45/114 (39.47%), Postives = 68/114 (59.65%), Query Frame = 0


Query: 6   ESQPEDKAQTQSLLRSGHRRPSCRWSL-LRRKKLPTARLGGRKPPKTVAIWRSIKEIRMR 65
           + QP     T++ +    R P+ R  + LRR+KLPT RLGG+KP +   + R  + +R+R
Sbjct: 4   DQQPHHPNPTETPIIPAVRGPTTRLQISLRRRKLPTVRLGGKKPRRGFTLARVFRRLRLR 63

Query: 66  KWVMKVRGDCMVTKLNQL---LGKDIVG----FDAFLKRILMEISLAVPLLGAS 112
            W +K++  CM+ KL +    L KD+V      + F +R+LME SLAVP+LG S
Sbjct: 64  -W-LKLQYTCMLKKLREYYRNLVKDMVDAGATLETFHQRVLMEASLAVPVLGVS 115

[Close]

BLAST of HG10023437 vs. ExPASy TrEMBL
Match: B9T8J8 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0134370 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 8.3e-07
Identity = 42/106 (39.62%), Postives = 67/106 (63.21%), Query Frame = 0


Query: 11  DKAQTQSLLRSGHRRPSCRWSLLRRKKLPTARLGGRKPPKTVAIWRSIKEIRMRKWVMKV 70
           D+   Q+ L +  R P+ R   LRR+KLPT RLGG+KP +   + R ++++R+ KW +K+
Sbjct: 5   DETPCQTHLTTTFRWPTRRKIWLRRRKLPTLRLGGKKPRRGSFLIRVLRKVRL-KW-LKL 64

Query: 71  RGDCMVTKLNQL---LGKDIV----GFDAFLKRILMEISLAVPLLG 110
           +  CM+ KL +    L KD+V      + + +R++ME SLAVP+LG
Sbjct: 65  QYSCMLRKLKEYYRNLIKDVVEAGATIEVYQQRLVMEASLAVPVLG 108

[Close]

BLAST of HG10023437 vs. ExPASy TrEMBL
Match: A0A061GDP5 (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_029154 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 4.1e-06
Identity = 40/87 (45.98%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 32  LLRRKKLPTARLGGRKPPKTVAIWRSIKEIRMRKWVMKVRGDCMVTKLNQL---LGKDIV 91
           LLRR K+PT RLGG+KP + + I R +K+IR+R W +K++  CM+ KL +    L KDIV
Sbjct: 31  LLRRNKMPTVRLGGKKPRRGLFIVRILKKIRLR-W-LKLQYTCMLRKLRKYYRNLIKDIV 90

Query: 92  ----GFDAFLKRILMEISLAVPLLGAS 112
                 +A  +R+ ME + AVP+LG S
Sbjct: 91  EAGASVEALQQRMFMESTFAVPVLGVS 115

The following BLAST results are available for this feature:

BLAST of HG10023437 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7013982.1	1.7e-30	67.57	hypothetical protein SDJN02_24152, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6575440.1	1.7e-30	67.57	hypothetical protein SDJN03_26079, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6593556.1	6.7e-27	62.50	hypothetical protein SDJN03_13032, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAE8646502.1	1.9e-26	65.71	hypothetical protein Csa_015773 [Cucumis sativus]	[more]
KAA0059393.1	3.3e-26	64.35	hypothetical protein E6C27_scaffold242G001190 [Cucumis melo var. makuwa] >TYK039...	[more]

BLAST of HG10023437 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10023437 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCH4	3.2e-27	65.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448920 PE=4 SV=1	[more]
A0A5A7UTZ4	1.6e-26	64.35	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5N6QI76	2.2e-07	39.47	Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_003523 PE=4 SV=1	[more]
B9T8J8	8.3e-07	39.62	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0134370 PE=4 SV=1	[more]
A0A061GDP5	4.1e-06	45.98	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_029154 PE=4 SV=1	[more]

BLAST of HG10023437 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10023437.1	HG10023437.1	mRNA