HG10023422 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10023422
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	zinc finger CCCH domain-containing protein 62-like
Location	Chr05: 34065371 .. 34068169 (+)
RNA-Seq Expression	HG10023422
Synteny	HG10023422

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATTTTCTGGGAATCTCGACACTGATTCTCTTCGCCTCGATCTAGAAGAACCTATCGATGACAATGGAGAATCGGACAGCGAGTATGATTCCGATGATTCGTTATGTGATCCGAGTTACAGCATTGAGAAAAAGACCAATTCCAAGGTTTCAAGGACCTCGATCAGGAAGAAATCAAAGCCGTTGTAAATATTTGGATCTTTTAACAAATTTCCGATCTTTTTCGCTGCGTTCAACTATTATACTTGATTAATCGATATAGAGCTGGAATTGATTAGGGTTTTTTTTTTTTTTGTGCATTTTTGCAGGGAAGTTGTGGATATGAACCTGATCGTGGATACAGATATAGATGATGTAGCGCCAGATGTTCCGATTCTAAATGAAAATGATGAAAAAGATATTCGTGAAGTGCTATCAATGATTAAAGGTTAGTCAATTTTTTGATGGTTCCTTCCTATGAACAGAGAAGGCCATTAGAAATCGAAACTCTATGAGCTTCTTTCCTATCCTCTCTTTGCGTTTCTTGTAAACAATCGATGTGTTCTATGCCTTAGGTATTTGCTGAAGTATTATGAATTTGTGTCAAGTTCAAGAGTAAAATTTTATTTTTCATATGGATTTCAGTTCCCCCGTGGAAGTATGCATTAGTTGAGACGAGTAAAAACACTCGAAAATGCTCTCATTCTTTTGACCAAATGAACTCAGAAAACGCTAGTTCAACATTGTTTTAGTCTCTCCTTGTTCCTCACATAACACATTTCTCTATCATCCTTTGAGCCCAGCTGGAAAGCTAGAGAAACTCAAGGTAGAACAATGTAAAGCTTATCTGAGAATGAATGGATTGAGGCTTACAGGAACTAAAGATGTACTCATTCAGCGCATCAAGGAGCATCTGGAGTAAGTTTGTATTCTATGTATGGTAGTAAAAAAATGGTTTTGAAAGGAGCCTATGTCTAATGGTGCATTTCTTTCTCTTTCCTCTTTCAATTATTTACAGGATTTTAAATGGTGGAGGGGAGAAGAAATACCCAGAGTATAGCTTTATAGTGAATTGTAAAGGTATGATCTTAGTTACATGATGGGGATATTATGACGGCGAGAAGTATGTGGCTGTTTAATCGTGTAGATCAGTTTATTTGTTCTCATTTCAATGTGTTGCTGATTTTTAATAATAATGTTTTTTTTTTTTAATTCTTGAGGATTGTCTTTTTGTGCCTAGCTACGACACATTTCTTGTTATGTAATTGGTATAATATCTCTGTTCTCTCGTGTTTGATATTCCTTTGATATTCGTTTGATACAGGTGATGCCTGCATGGGTGATGTTGTTATGTTTGAACAAAAAGTATACGAAATGTAAGAATTTAAATTCAATATATCTTATTCCAGTTTTCTTTTAAACAAATATTAGCCTGCTATCTCCATCATTTCTATAAGGATCAAGAATTCAATTTACCTGTGAGAATGATTGAGATTGGAATCTCGCTTAGAGCAATGAAATTTCTCTTTCCCAGATCCGTACTTATCTACTACTTTTCATATCATGGATAGTTTCTTAACAGGATATTCATCATTCAGGTACAATATAGCATCTAGGAGCTCCAAAGGTCCTTCATGCGGAACAAGGACTGTTGCAGGTCGCATTGTGAAAGAAAGCTATGGTTCTTCTAAGCAACAACATACATTTACGGTGAGGTGATTTTTAAAGTGAATTATGAAGAATGACAATAGTATTTATTATAACAAGCCTTTCCTTTCTCCATTTTTGAGCCAGATTGAAGTATTGTGGAGTAAGCGTGAGAAACCCCTACCTCCGCTTCATCCCCTTTTAATCAAGGGTCGAAATCTTTACCGGATGAAGACTTTGAGACAGGTTACAGTTACATATTCTATATTCTTTCTTTGACTTTTCTTTAATAGTCTTAACTTTTCTTAAAACAACCCCCATTTGGTCGAATTTTGTAGACTTGGGAAGATGAAGGAGAAAGGCAGAAAGTATTGATGGAAAAACATGCTAGGGGATCACTTGCAAGATCAAATAGAGAAGCACGTGTAGTAGAGAAAGAAAAAAGGAAAACACACAAGGAAAATAGGTATTATCATTTGCTTTGAAACGAGACTTATTAATCTATATTCATCCATATGTACTCAGTATTTTGAAATTCTATGCTTCAGGAAATCAAAGAATGAAGGTTTTAGAGACAATCCTTCTCAGTCAAATCTATCTTCAGCAGGAACAACGTTAGCTGAATCCATGGCAAAGTTATCGGTTGATTCGAGAAAAGTGGTTCATCGACATCAGAAAGAACCTTTGTTTGGTAATTCAAGAAAAGCATTTCAACACCAACATCCAGAAAATCTAACTGATCAAACAAAATCAGATCATAATAGACTGCCATTTGAACATCAGCAAATGGTGGATACAATGCAAAACAATTACTATAGCCAACCCCAAATGAAAGTCAATCCTCCAGCAAGCTTAAATATTCATCCTAGCATTTATAGGGCTGATCATGCTGCTTCTGTTGTTAACAAGGTTCTTGATAATACAAACCGCAGATCGTGGGATTATTATCATTCTAAATTGCCAATGGATCGAATGAATCTTTATCCTAAAGTGAATCAAACTGGGCAAGAAGGCTACAAGCAACAACGATGCCGTTATTATGCTGTAGGGAGATGTTACTACAGGGAGAATTGTAAATTCTCGCATGAAATGACAGAAGATTTTGTCCGAAGTGAGAAAGAAAGATTTGGCCATCATCAAATGAATCAAAATGCTCGCTATTGTCGATAA

mRNA sequence

ATGGCATTTTCTGGGAATCTCGACACTGATTCTCTTCGCCTCGATCTAGAAGAACCTATCGATGACAATGGAGAATCGGACAGCGAGTATGATTCCGATGATTCGTTATGTGATCCGAGTTACAGCATTGAGAAAAAGACCAATTCCAAGGTTTCAAGGACCTCGATCAGGAAGAAATCAAAGCCGTTGGAAGTTGTGGATATGAACCTGATCGTGGATACAGATATAGATGATGTAGCGCCAGATGTTCCGATTCTAAATGAAAATGATGAAAAAGATATTCGTGAAGTGCTATCAATGATTAAAGCTGGAAAGCTAGAGAAACTCAAGGTAGAACAATGTAAAGCTTATCTGAGAATGAATGGATTGAGGCTTACAGGAACTAAAGATGTACTCATTCAGCGCATCAAGGAGCATCTGGAGATTTTAAATGGTGGAGGGGAGAAGAAATACCCAGAGTATAGCTTTATAGTGAATTGTAAAGGTGATGCCTGCATGGGTGATGTTGTTATGTTTGAACAAAAAGTATACGAAATGTACAATATAGCATCTAGGAGCTCCAAAGGTCCTTCATGCGGAACAAGGACTGTTGCAGGTCGCATTGTGAAAGAAAGCTATGGTTCTTCTAAGCAACAACATACATTTACGATTGAAGTATTGTGGAGTAAGCGTGAGAAACCCCTACCTCCGCTTCATCCCCTTTTAATCAAGGGTCGAAATCTTTACCGGATGAAGACTTTGAGACAGACTTGGGAAGATGAAGGAGAAAGGCAGAAAGTATTGATGGAAAAACATGCTAGGGGATCACTTGCAAGATCAAATAGAGAAGCACGTGTAGTAGAGAAAGAAAAAAGGAAAACACACAAGGAAAATAGGAAATCAAAGAATGAAGGTTTTAGAGACAATCCTTCTCAGTCAAATCTATCTTCAGCAGGAACAACGTTAGCTGAATCCATGGCAAAGTTATCGGTTGATTCGAGAAAAGTGGTTCATCGACATCAGAAAGAACCTTTGTTTGGTAATTCAAGAAAAGCATTTCAACACCAACATCCAGAAAATCTAACTGATCAAACAAAATCAGATCATAATAGACTGCCATTTGAACATCAGCAAATGGTGGATACAATGCAAAACAATTACTATAGCCAACCCCAAATGAAAGTCAATCCTCCAGCAAGCTTAAATATTCATCCTAGCATTTATAGGGCTGATCATGCTGCTTCTGTTGTTAACAAGGTTCTTGATAATACAAACCGCAGATCGTGGGATTATTATCATTCTAAATTGCCAATGGATCGAATGAATCTTTATCCTAAAGTGAATCAAACTGGGCAAGAAGGCTACAAGCAACAACGATGCCGTTATTATGCTGTAGGGAGATGTTACTACAGGGAGAATTGTAAATTCTCGCATGAAATGACAGAAGATTTTGTCCGAAGTGAGAAAGAAAGATTTGGCCATCATCAAATGAATCAAAATGCTCGCTATTGTCGATAA

Coding sequence (CDS)

ATGGCATTTTCTGGGAATCTCGACACTGATTCTCTTCGCCTCGATCTAGAAGAACCTATCGATGACAATGGAGAATCGGACAGCGAGTATGATTCCGATGATTCGTTATGTGATCCGAGTTACAGCATTGAGAAAAAGACCAATTCCAAGGTTTCAAGGACCTCGATCAGGAAGAAATCAAAGCCGTTGGAAGTTGTGGATATGAACCTGATCGTGGATACAGATATAGATGATGTAGCGCCAGATGTTCCGATTCTAAATGAAAATGATGAAAAAGATATTCGTGAAGTGCTATCAATGATTAAAGCTGGAAAGCTAGAGAAACTCAAGGTAGAACAATGTAAAGCTTATCTGAGAATGAATGGATTGAGGCTTACAGGAACTAAAGATGTACTCATTCAGCGCATCAAGGAGCATCTGGAGATTTTAAATGGTGGAGGGGAGAAGAAATACCCAGAGTATAGCTTTATAGTGAATTGTAAAGGTGATGCCTGCATGGGTGATGTTGTTATGTTTGAACAAAAAGTATACGAAATGTACAATATAGCATCTAGGAGCTCCAAAGGTCCTTCATGCGGAACAAGGACTGTTGCAGGTCGCATTGTGAAAGAAAGCTATGGTTCTTCTAAGCAACAACATACATTTACGATTGAAGTATTGTGGAGTAAGCGTGAGAAACCCCTACCTCCGCTTCATCCCCTTTTAATCAAGGGTCGAAATCTTTACCGGATGAAGACTTTGAGACAGACTTGGGAAGATGAAGGAGAAAGGCAGAAAGTATTGATGGAAAAACATGCTAGGGGATCACTTGCAAGATCAAATAGAGAAGCACGTGTAGTAGAGAAAGAAAAAAGGAAAACACACAAGGAAAATAGGAAATCAAAGAATGAAGGTTTTAGAGACAATCCTTCTCAGTCAAATCTATCTTCAGCAGGAACAACGTTAGCTGAATCCATGGCAAAGTTATCGGTTGATTCGAGAAAAGTGGTTCATCGACATCAGAAAGAACCTTTGTTTGGTAATTCAAGAAAAGCATTTCAACACCAACATCCAGAAAATCTAACTGATCAAACAAAATCAGATCATAATAGACTGCCATTTGAACATCAGCAAATGGTGGATACAATGCAAAACAATTACTATAGCCAACCCCAAATGAAAGTCAATCCTCCAGCAAGCTTAAATATTCATCCTAGCATTTATAGGGCTGATCATGCTGCTTCTGTTGTTAACAAGGTTCTTGATAATACAAACCGCAGATCGTGGGATTATTATCATTCTAAATTGCCAATGGATCGAATGAATCTTTATCCTAAAGTGAATCAAACTGGGCAAGAAGGCTACAAGCAACAACGATGCCGTTATTATGCTGTAGGGAGATGTTACTACAGGGAGAATTGTAAATTCTCGCATGAAATGACAGAAGATTTTGTCCGAAGTGAGAAAGAAAGATTTGGCCATCATCAAATGAATCAAAATGCTCGCTATTGTCGATAA

Protein sequence

MAFSGNLDTDSLRLDLEEPIDDNGESDSEYDSDDSLCDPSYSIEKKTNSKVSRTSIRKKSKPLEVVDMNLIVDTDIDDVAPDVPILNENDEKDIREVLSMIKAGKLEKLKVEQCKAYLRMNGLRLTGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDVVMFEQKVYEMYNIASRSSKGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKREKPLPPLHPLLIKGRNLYRMKTLRQTWEDEGERQKVLMEKHARGSLARSNREARVVEKEKRKTHKENRKSKNEGFRDNPSQSNLSSAGTTLAESMAKLSVDSRKVVHRHQKEPLFGNSRKAFQHQHPENLTDQTKSDHNRLPFEHQQMVDTMQNNYYSQPQMKVNPPASLNIHPSIYRADHAASVVNKVLDNTNRRSWDYYHSKLPMDRMNLYPKVNQTGQEGYKQQRCRYYAVGRCYYRENCKFSHEMTEDFVRSEKERFGHHQMNQNARYCR

Homology

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BLAST of HG10023422 vs. NCBI nr
Match: XP_038899462.1 (zinc finger CCCH domain-containing protein 62-like [Benincasa hispida])

HSP 1 Score: 801.6 bits (2069), Expect = 3.9e-228
Identity = 418/503 (83.10%), Postives = 447/503 (88.87%), Query Frame = 0


Query: 1   MAFSGNLDTDSLRLDLEEPIDDNGESDSEYDSDDSLCDPSYSIEKKTNSKVSRTSIRKKS 60
           MAFS NL+T+  R DLEE IDDN +SD EY S DS CDPSY IEKKTNSKVSRTSIRKKS
Sbjct: 1   MAFSDNLETNPSRFDLEELIDDNCDSDDEYHSHDSECDPSYRIEKKTNSKVSRTSIRKKS 60

Query: 61  KPLEVVDMNLIVDTDIDDVAPDVPILNENDEKDIREVLSMIKAGKLEKLKVEQCKAYLRM 120
           KPLE+VDMNLIVD DIDDVAP+VPILNENDEKDIREVLS++K GKLEKLKVEQCKAYLR 
Sbjct: 61  KPLEIVDMNLIVDMDIDDVAPNVPILNENDEKDIREVLSIVKTGKLEKLKVEQCKAYLRK 120

Query: 121 NGLRLTGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDVVMFEQKVYEMY 180
           NGLRLTGTKDVLIQRIKEHLEILN GGE KYPEYSFIVNCKGDACMGDVVMFEQKVYEMY
Sbjct: 121 NGLRLTGTKDVLIQRIKEHLEILNSGGENKYPEYSFIVNCKGDACMGDVVMFEQKVYEMY 180

Query: 181 NIASRSSKGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKREKPLPPLHPLLIKGRN 240
           NIASRSS GPS GTRTV GRIVKESYGSSKQQHTFTIEVLWSK EKPLPPLHPLLIKGRN
Sbjct: 181 NIASRSSIGPSRGTRTVVGRIVKESYGSSKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTLRQTWEDEGERQKVLMEKHARGSLARSNREARVVEKEKRKTHKENRKSKNEGFR 300
           LYR+KT RQTWEDEGERQKVLMEKHARGSLARSNRE RVVE+EKRKTHKENRKS+NEGF+
Sbjct: 241 LYRIKTFRQTWEDEGERQKVLMEKHARGSLARSNRETRVVEREKRKTHKENRKSRNEGFK 300

Query: 301 DNPSQSNLSSAGTTLAESMAKLSVDSRKVVHRHQKEPLFGNSRKAFQHQHPENLTDQTKS 360
           DNPSQSNLSSAGTTL +SM KLSVDSRKVVH+HQ+E LFGNS KAFQHQ PEN ++QTKS
Sbjct: 301 DNPSQSNLSSAGTTLVQSMEKLSVDSRKVVHQHQEEQLFGNSGKAFQHQQPENPSNQTKS 360

Query: 361 ----DHNRLPFEHQQMVDTMQNNYYSQPQMKVNPPASLNI-HPSIYRADHAASVVNKVLD 420
               DHNRLPF+H       QNNYYSQPQMK N  A  +I  P IY+ADHAAS VN+VLD
Sbjct: 361 DLFIDHNRLPFQH-------QNNYYSQPQMKANHSACYSIMQPIIYKADHAAS-VNEVLD 420

Query: 421 NTNRRSWDYYHSKLPMDRMNLYPKVNQTGQEGYKQQRCRYYAVGRCYYRENCKFSHEMTE 480
           NTNR SWDY++S+LPM RMNLYP+VNQT QEGYKQQ+CR+YAVGRCYY ENCKFSHEMT 
Sbjct: 421 NTNRSSWDYHYSRLPMGRMNLYPRVNQTAQEGYKQQQCRHYAVGRCYYGENCKFSHEMTR 480

Query: 481 DFVRSEKERFGHHQMNQNARYCR 499
           DFVR EKER GHH ++QNAR+CR
Sbjct: 481 DFVRREKERLGHHHIHQNARHCR 495

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BLAST of HG10023422 vs. NCBI nr
Match: XP_031744267.1 (zinc finger CCCH domain-containing protein 62 isoform X2 [Cucumis sativus])

HSP 1 Score: 776.2 bits (2003), Expect = 1.7e-220
Identity = 405/507 (79.88%), Postives = 443/507 (87.38%), Query Frame = 0


Query: 1   MAFSGNLDTDSLRLDLEEPIDDNGESDSEYDSDDSLCDPSYSIEKKTNSKVSRTSIRKKS 60
           MAFSGNL TD    DLEE ID+NG SD +YDSDD  CDPSYSI+K+TNSK SRTSIRKK 
Sbjct: 1   MAFSGNLGTDPSLFDLEEIIDNNGGSDDDYDSDDLECDPSYSIQKRTNSKTSRTSIRKKL 60

Query: 61  KPLEVVDMNLIVDTDIDDVAPDVPILNENDEKDIREVLSMIKAGKLEKLKVEQCKAYLRM 120
           KPL++VD NLI D+DIDDV P++PI+NE DEKD REVLS+IK GKLEKLKVEQCK+YLR 
Sbjct: 61  KPLDIVDTNLIEDSDIDDVVPNIPIINEKDEKDTREVLSIIKGGKLEKLKVEQCKSYLRN 120

Query: 121 NGLRLTGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDVVMFEQKVYEMY 180
           NGLRL+GTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGD+VMFEQKVYEMY
Sbjct: 121 NGLRLSGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDIVMFEQKVYEMY 180

Query: 181 NIASRSSKGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKREKPLPPLHPLLIKGRN 240
           NIASRSS GPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSK EKPLPPLHPLLIKGRN
Sbjct: 181 NIASRSSTGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTLRQTWEDEGERQKVLMEKHARGSLARSNREARVVEKEKRKTHKENRKSKNEGFR 300
           LYRMKT+RQ WEDE ERQKVLMEKHARGSLARSNREARV+EKEKRKTHKENR+ + EGFR
Sbjct: 241 LYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNREARVIEKEKRKTHKENREPRKEGFR 300

Query: 301 DNPSQSNLSSAGTTLAESMAKLSVDSRKVVHRHQKEPLFGNSRKAFQHQHPENLTDQTKS 360
           +NPSQSNLSSAGT LA SMAKLSV+ R VVH+HQ+ P FGN RKA         TDQTKS
Sbjct: 301 NNPSQSNLSSAGTILANSMAKLSVE-RNVVHQHQERPSFGNLRKA---------TDQTKS 360

Query: 361 -----DH-NRLPFEHQQMVD-TMQNNYYSQPQMKVNPPASLNIHPSIYRADHAASVVNKV 420
                DH NRLPF+HQ MVD T++NNYYSQPQ K NPPA  NIHPSIYR +HAA+ VNKV
Sbjct: 361 HLFIDDHNNRLPFQHQHMVDNTIKNNYYSQPQTKANPPAIFNIHPSIYRNNHAAASVNKV 420

Query: 421 LDNTNRRSWDY-YHSKLPMDRMNLYPKVNQTGQEGYKQQRCRYYAVGRCYYRENCKFSHE 480
           LDNTN  SWDY +HS+LPMDRMNLYPKVN + QEGYKQQ+CRYYAVG+CYYRENCKFSH+
Sbjct: 421 LDNTNHISWDYDHHSRLPMDRMNLYPKVNHSAQEGYKQQQCRYYAVGKCYYRENCKFSHD 480

Query: 481 MTEDFVRSEKERFGH-HQMNQNARYCR 499
           MTEDFV+ E+ER GH + M+QNAR+CR
Sbjct: 481 MTEDFVQRERERLGHRYHMHQNARHCR 497

[Close]

BLAST of HG10023422 vs. NCBI nr
Match: XP_004141817.1 (zinc finger CCCH domain-containing protein 62 isoform X1 [Cucumis sativus] >KGN45466.1 hypothetical protein Csa_016559 [Cucumis sativus])

HSP 1 Score: 773.1 bits (1995), Expect = 1.5e-219
Identity = 406/508 (79.92%), Postives = 444/508 (87.40%), Query Frame = 0


Query: 1   MAFSGNLDTDSLRLDLEEPIDDNGESDSEYDSDDSLCDPSYSIEKKTNSKVSRTSIRKKS 60
           MAFSGNL TD    DLEE ID+NG SD +YDSDD  CDPSYSI+K+TNSK SRTSIRKK 
Sbjct: 1   MAFSGNLGTDPSLFDLEEIIDNNGGSDDDYDSDDLECDPSYSIQKRTNSKTSRTSIRKKL 60

Query: 61  KPLEVVDMNLIVDTDIDDVAPDVPILNENDEKDIREVLSMIKA-GKLEKLKVEQCKAYLR 120
           KPL++VD NLI D+DIDDV P++PI+NE DEKD REVLS+IKA GKLEKLKVEQCK+YLR
Sbjct: 61  KPLDIVDTNLIEDSDIDDVVPNIPIINEKDEKDTREVLSIIKAGGKLEKLKVEQCKSYLR 120

Query: 121 MNGLRLTGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDVVMFEQKVYEM 180
            NGLRL+GTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGD+VMFEQKVYEM
Sbjct: 121 NNGLRLSGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDIVMFEQKVYEM 180

Query: 181 YNIASRSSKGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKREKPLPPLHPLLIKGR 240
           YNIASRSS GPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSK EKPLPPLHPLLIKGR
Sbjct: 181 YNIASRSSTGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKGEKPLPPLHPLLIKGR 240

Query: 241 NLYRMKTLRQTWEDEGERQKVLMEKHARGSLARSNREARVVEKEKRKTHKENRKSKNEGF 300
           NLYRMKT+RQ WEDE ERQKVLMEKHARGSLARSNREARV+EKEKRKTHKENR+ + EGF
Sbjct: 241 NLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNREARVIEKEKRKTHKENREPRKEGF 300

Query: 301 RDNPSQSNLSSAGTTLAESMAKLSVDSRKVVHRHQKEPLFGNSRKAFQHQHPENLTDQTK 360
           R+NPSQSNLSSAGT LA SMAKLSV+ R VVH+HQ+ P FGN RKA         TDQTK
Sbjct: 301 RNNPSQSNLSSAGTILANSMAKLSVE-RNVVHQHQERPSFGNLRKA---------TDQTK 360

Query: 361 S-----DH-NRLPFEHQQMVD-TMQNNYYSQPQMKVNPPASLNIHPSIYRADHAASVVNK 420
           S     DH NRLPF+HQ MVD T++NNYYSQPQ K NPPA  NIHPSIYR +HAA+ VNK
Sbjct: 361 SHLFIDDHNNRLPFQHQHMVDNTIKNNYYSQPQTKANPPAIFNIHPSIYRNNHAAASVNK 420

Query: 421 VLDNTNRRSWDY-YHSKLPMDRMNLYPKVNQTGQEGYKQQRCRYYAVGRCYYRENCKFSH 480
           VLDNTN  SWDY +HS+LPMDRMNLYPKVN + QEGYKQQ+CRYYAVG+CYYRENCKFSH
Sbjct: 421 VLDNTNHISWDYDHHSRLPMDRMNLYPKVNHSAQEGYKQQQCRYYAVGKCYYRENCKFSH 480

Query: 481 EMTEDFVRSEKERFGH-HQMNQNARYCR 499
           +MTEDFV+ E+ER GH + M+QNAR+CR
Sbjct: 481 DMTEDFVQRERERLGHRYHMHQNARHCR 498

[Close]

BLAST of HG10023422 vs. NCBI nr
Match: XP_008462271.1 (PREDICTED: zinc finger CCCH domain-containing protein 62-like [Cucumis melo] >KAA0059379.1 zinc finger CCCH domain-containing protein 62-like [Cucumis melo var. makuwa] >TYK03947.1 zinc finger CCCH domain-containing protein 62-like [Cucumis melo var. makuwa])

HSP 1 Score: 751.1 bits (1938), Expect = 6.0e-213
Identity = 395/507 (77.91%), Postives = 431/507 (85.01%), Query Frame = 0


Query: 1   MAFSGNLDTDSLRLDLEEPIDDNGESDSEYDSDDSLCDPSYSIEKKTNSKVSRTSIRKKS 60
           MAF  NL+TD  R DLEE IDDNGESD EY SDDS CDPSYSI+K+TNSK SRTSIRKKS
Sbjct: 1   MAFPRNLETDPSRFDLEELIDDNGESDDEYYSDDSECDPSYSIQKRTNSKTSRTSIRKKS 60

Query: 61  KPLEVVDMNLIVDTDIDDVAPDVPILNENDEKDIREVLSMIKAGKLEKLKVEQCKAYLRM 120
           KPL+ +DMNL  D+DIDD  P++PILNE DEKD  EVLS+IKAGKLEKLKVEQCK+YLR 
Sbjct: 61  KPLDALDMNLTGDSDIDDDVPNIPILNEKDEKDTLEVLSIIKAGKLEKLKVEQCKSYLRK 120

Query: 121 NGLRLTGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDVVMFEQKVYEMY 180
           NGLRL+GTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGD+VMFEQKVYEMY
Sbjct: 121 NGLRLSGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDIVMFEQKVYEMY 180

Query: 181 NIASRSSKGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKREKPLPPLHPLLIKGRN 240
           NIASRSSKGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSK EKPLPPLHPLLIKGRN
Sbjct: 181 NIASRSSKGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTLRQTWEDEGERQKVLMEKHARGSLARSNREARVVEKEKRKTHKENRKSKNEGFR 300
           LYRMKT+RQTWEDE ERQKVL EKHARGSLARSNREARV+EKEKRKTHKENR+S+ EG+R
Sbjct: 241 LYRMKTMRQTWEDERERQKVLKEKHARGSLARSNREARVIEKEKRKTHKENRESRKEGYR 300

Query: 301 DNPSQSNLSSAGTTLAESMAKLSVDSRKVVHRHQKEPLFGNSRKAFQHQHPENLTDQTK- 360
           +NPS+SNLSSAGT LAESMAKL+VDSR VVH+HQ+ P FGN  KA          DQ + 
Sbjct: 301 NNPSRSNLSSAGTMLAESMAKLTVDSRNVVHQHQERPSFGNLGKATDQTKSHMFIDQNRL 360

Query: 361 -SDH-----NRLPFEHQQMVD-TMQNNYYSQPQMKVNPPASLNIHPSIYRADHAASVVNK 420
            S H     NRLPF+HQ MVD TMQNNYYSQPQ K NPPAS NI PSIYR + AAS VNK
Sbjct: 361 PSQHQHMMDNRLPFQHQHMVDNTMQNNYYSQPQTKANPPASFNIQPSIYRTNPAASSVNK 420

Query: 421 VLDNTNRRSWDYYHSKLPMDRMNLYPKVNQTGQEGYKQQRCRYYAVGRCYYRENCKFSHE 480
           VLDN N          +PMDRMNLYPKVN + QEGY Q +CRY+AVG+CYYRE+CKFSH+
Sbjct: 421 VLDNRNH---------IPMDRMNLYPKVNHSAQEGYNQPQCRYFAVGKCYYRESCKFSHD 480

Query: 481 MTEDFVRSEKERFGH-HQMNQNARYCR 499
           MTEDFV+ EKER GH + M+QNAR+CR
Sbjct: 481 MTEDFVQREKERLGHYYHMHQNARHCR 498

[Close]

BLAST of HG10023422 vs. NCBI nr
Match: KAG6575426.1 (Zinc finger CCCH domain-containing protein 62, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 706.8 bits (1823), Expect = 1.3e-199
Identity = 382/510 (74.90%), Postives = 412/510 (80.78%), Query Frame = 0


Query: 1   MAFSGNLDTDSLRLDLEEPIDDNGESDSEYDSDDSLCDPSYSIEKKTNSKVSRTSIRKKS 60
           MAFSGN  TD  R +LEE IDD+GESD + DSDDS CDPSYS E+ TNSKVSR SIRKKS
Sbjct: 1   MAFSGNFVTDPRRFELEELIDDHGESDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS 60

Query: 61  KPLEVVDMNLIVDTDIDDVAPDVPILNENDEKDIREVLSMIKAGKLEKLKVEQCKAYLRM 120
           KP EV D  LI    +DDV P+V  LNENDEKDI EVLS+IKAGKLEKLKVEQCKAYLR 
Sbjct: 61  KPSEVEDRELIAQAYLDDVVPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRK 120

Query: 121 NGLRLTGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDVVMFEQKVYEMY 180
           NGLRLTGTKDVLIQRI EHLEILNGGGEKKYPEYSF VNCKGDACMGDVVMFEQKVYEMY
Sbjct: 121 NGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMY 180

Query: 181 NIASRSSKGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKREKPLPPLHPLLIKGRN 240
           NIASRSS GPSCGTR VAGRIVKESYG+SKQQHTFTIEVLWSK EKPLPPLHPLLIKGRN
Sbjct: 181 NIASRSSIGPSCGTRIVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTLRQTWEDEGERQKVLMEKHARGSLARSNREARVVEKEKRKTHKENRKSKNEGFR 300
           LYRMKT+RQTWEDEGERQKVLMEKHARGSLARS REARVVEKEKRKTH ENRKS+ EGF 
Sbjct: 241 LYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFS 300

Query: 301 DNPSQSNLSSAGTTLAESMAKLSVDSRKVVHRHQKEPLFGNSRKAFQHQHPENLTDQTKS 360
           +NPSQSNLSSAGT LAE+M KLSVD+RK VH HQ+ PLFGNS +  +  +P   T QTKS
Sbjct: 301 ENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQERPLFGNSGEPPRQHNP---TKQTKS 360

Query: 361 ----DHNRLPFEHQQMVDTMQNNYYSQPQMKVN-PPASLNIHPSIYRADHAASVVNKVLD 420
               DH+R P++ Q MV+ +QNNY+SQPQMK + PP S N+HPSIYRADH A        
Sbjct: 361 DVFIDHSRRPYQLQPMVNPVQNNYFSQPQMKPDPPPVSYNVHPSIYRADHPA-------- 420

Query: 421 NTNRRSWDYYHSKLPMDRMNLYPKVNQTGQEGYKQQRCRYYAVGRCYYRENCKFSHEMTE 480
                      S+L M +MNLYPKVNQ  QE YKQQRCRYYAVGRC+Y ENCKFSHEMT+
Sbjct: 421 -----------SRLAMGQMNLYPKVNQHAQESYKQQRCRYYAVGRCHYGENCKFSHEMTQ 480

Query: 481 DFVRSEKERFG-------HHQMNQNARYCR 499
           DF   EKER G       HHQM+QNAR CR
Sbjct: 481 DFAGREKERLGRHHHHHHHHQMHQNARLCR 488

[Close]

BLAST of HG10023422 vs. ExPASy Swiss-Prot
Match: Q338N2 (Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0391300 PE=4 SV=2)

HSP 1 Score: 221.1 bits (562), Expect = 2.8e-56
Identity = 134/307 (43.65%), Postives = 183/307 (59.61%), Query Frame = 0


Query: 7   LDTDSLRLDLEEPIDDNGESDSEYDSDDSLCDP---SY-------------SIEKKTNSK 66
           +++D    +  E  D + E D E  S   +CDP   SY              ++    S+
Sbjct: 32  VESDDEEEEEGEGYDWSEEDDPEAASLAGICDPDAGSYDDPTFDPAADGDLEVDAVLRSR 91

Query: 67  VSRTSIRKKSKPLEVVDMNLIVDTDIDDVAPDVPILNENDEKDIREVLSMIKAGKLEKLK 126
           ++R S+    K               D     +P + + +   +  V  ++  G+LEKLK
Sbjct: 92  MARMSLSSARK---------------DRKGSRMPKMGKEEMDLLAMVDKLMHDGQLEKLK 151

Query: 127 VEQCKAYLRMNGLRLTGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDVV 186
           V +CKAYLRM+ LRL+G K+VL+ RI+  +E+    GE KYP  SF++NC+GD+C GDVV
Sbjct: 152 VYECKAYLRMHKLRLSGNKEVLLTRIRGQIEV-KTMGEVKYPVSSFVLNCQGDSCKGDVV 211

Query: 187 MFEQKVYEMYNIASRSSKGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKREKPLPP 246
           +FEQ +Y+    A R  KG  CG RT AGRI+KESYG+ KQQHTFTIE+LWS+  KP PP
Sbjct: 212 VFEQNIYKRKKGAPRGVKGHLCGQRTNAGRIIKESYGTKKQQHTFTIEILWSRGYKPWPP 271

Query: 247 LHPLLIKGRNLYRMKTLRQTWEDEGERQKVLMEKHARGSLARSNREARVVEKEKRKTHKE 298
           LHPLLIKGRNLY+ KT+RQ W DE ER + L EKHARG +AR  RE R+ +KE  +  + 
Sbjct: 272 LHPLLIKGRNLYKDKTMRQPWLDEEERNRALQEKHARGYVARKTREVRIKDKENERMRRL 322

[Close]

BLAST of HG10023422 vs. ExPASy TrEMBL
Match: A0A0A0KCF3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448770 PE=4 SV=1)

HSP 1 Score: 773.1 bits (1995), Expect = 7.1e-220
Identity = 406/508 (79.92%), Postives = 444/508 (87.40%), Query Frame = 0


Query: 1   MAFSGNLDTDSLRLDLEEPIDDNGESDSEYDSDDSLCDPSYSIEKKTNSKVSRTSIRKKS 60
           MAFSGNL TD    DLEE ID+NG SD +YDSDD  CDPSYSI+K+TNSK SRTSIRKK 
Sbjct: 1   MAFSGNLGTDPSLFDLEEIIDNNGGSDDDYDSDDLECDPSYSIQKRTNSKTSRTSIRKKL 60

Query: 61  KPLEVVDMNLIVDTDIDDVAPDVPILNENDEKDIREVLSMIKA-GKLEKLKVEQCKAYLR 120
           KPL++VD NLI D+DIDDV P++PI+NE DEKD REVLS+IKA GKLEKLKVEQCK+YLR
Sbjct: 61  KPLDIVDTNLIEDSDIDDVVPNIPIINEKDEKDTREVLSIIKAGGKLEKLKVEQCKSYLR 120

Query: 121 MNGLRLTGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDVVMFEQKVYEM 180
            NGLRL+GTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGD+VMFEQKVYEM
Sbjct: 121 NNGLRLSGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDIVMFEQKVYEM 180

Query: 181 YNIASRSSKGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKREKPLPPLHPLLIKGR 240
           YNIASRSS GPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSK EKPLPPLHPLLIKGR
Sbjct: 181 YNIASRSSTGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKGEKPLPPLHPLLIKGR 240

Query: 241 NLYRMKTLRQTWEDEGERQKVLMEKHARGSLARSNREARVVEKEKRKTHKENRKSKNEGF 300
           NLYRMKT+RQ WEDE ERQKVLMEKHARGSLARSNREARV+EKEKRKTHKENR+ + EGF
Sbjct: 241 NLYRMKTMRQPWEDEDERQKVLMEKHARGSLARSNREARVIEKEKRKTHKENREPRKEGF 300

Query: 301 RDNPSQSNLSSAGTTLAESMAKLSVDSRKVVHRHQKEPLFGNSRKAFQHQHPENLTDQTK 360
           R+NPSQSNLSSAGT LA SMAKLSV+ R VVH+HQ+ P FGN RKA         TDQTK
Sbjct: 301 RNNPSQSNLSSAGTILANSMAKLSVE-RNVVHQHQERPSFGNLRKA---------TDQTK 360

Query: 361 S-----DH-NRLPFEHQQMVD-TMQNNYYSQPQMKVNPPASLNIHPSIYRADHAASVVNK 420
           S     DH NRLPF+HQ MVD T++NNYYSQPQ K NPPA  NIHPSIYR +HAA+ VNK
Sbjct: 361 SHLFIDDHNNRLPFQHQHMVDNTIKNNYYSQPQTKANPPAIFNIHPSIYRNNHAAASVNK 420

Query: 421 VLDNTNRRSWDY-YHSKLPMDRMNLYPKVNQTGQEGYKQQRCRYYAVGRCYYRENCKFSH 480
           VLDNTN  SWDY +HS+LPMDRMNLYPKVN + QEGYKQQ+CRYYAVG+CYYRENCKFSH
Sbjct: 421 VLDNTNHISWDYDHHSRLPMDRMNLYPKVNHSAQEGYKQQQCRYYAVGKCYYRENCKFSH 480

Query: 481 EMTEDFVRSEKERFGH-HQMNQNARYCR 499
           +MTEDFV+ E+ER GH + M+QNAR+CR
Sbjct: 481 DMTEDFVQRERERLGHRYHMHQNARHCR 498

[Close]

BLAST of HG10023422 vs. ExPASy TrEMBL
Match: A0A5A7V0Q9 (Zinc finger CCCH domain-containing protein 62-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001440 PE=4 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 2.9e-213
Identity = 395/507 (77.91%), Postives = 431/507 (85.01%), Query Frame = 0


Query: 1   MAFSGNLDTDSLRLDLEEPIDDNGESDSEYDSDDSLCDPSYSIEKKTNSKVSRTSIRKKS 60
           MAF  NL+TD  R DLEE IDDNGESD EY SDDS CDPSYSI+K+TNSK SRTSIRKKS
Sbjct: 1   MAFPRNLETDPSRFDLEELIDDNGESDDEYYSDDSECDPSYSIQKRTNSKTSRTSIRKKS 60

Query: 61  KPLEVVDMNLIVDTDIDDVAPDVPILNENDEKDIREVLSMIKAGKLEKLKVEQCKAYLRM 120
           KPL+ +DMNL  D+DIDD  P++PILNE DEKD  EVLS+IKAGKLEKLKVEQCK+YLR 
Sbjct: 61  KPLDALDMNLTGDSDIDDDVPNIPILNEKDEKDTLEVLSIIKAGKLEKLKVEQCKSYLRK 120

Query: 121 NGLRLTGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDVVMFEQKVYEMY 180
           NGLRL+GTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGD+VMFEQKVYEMY
Sbjct: 121 NGLRLSGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDIVMFEQKVYEMY 180

Query: 181 NIASRSSKGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKREKPLPPLHPLLIKGRN 240
           NIASRSSKGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSK EKPLPPLHPLLIKGRN
Sbjct: 181 NIASRSSKGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTLRQTWEDEGERQKVLMEKHARGSLARSNREARVVEKEKRKTHKENRKSKNEGFR 300
           LYRMKT+RQTWEDE ERQKVL EKHARGSLARSNREARV+EKEKRKTHKENR+S+ EG+R
Sbjct: 241 LYRMKTMRQTWEDERERQKVLKEKHARGSLARSNREARVIEKEKRKTHKENRESRKEGYR 300

Query: 301 DNPSQSNLSSAGTTLAESMAKLSVDSRKVVHRHQKEPLFGNSRKAFQHQHPENLTDQTK- 360
           +NPS+SNLSSAGT LAESMAKL+VDSR VVH+HQ+ P FGN  KA          DQ + 
Sbjct: 301 NNPSRSNLSSAGTMLAESMAKLTVDSRNVVHQHQERPSFGNLGKATDQTKSHMFIDQNRL 360

Query: 361 -SDH-----NRLPFEHQQMVD-TMQNNYYSQPQMKVNPPASLNIHPSIYRADHAASVVNK 420
            S H     NRLPF+HQ MVD TMQNNYYSQPQ K NPPAS NI PSIYR + AAS VNK
Sbjct: 361 PSQHQHMMDNRLPFQHQHMVDNTMQNNYYSQPQTKANPPASFNIQPSIYRTNPAASSVNK 420

Query: 421 VLDNTNRRSWDYYHSKLPMDRMNLYPKVNQTGQEGYKQQRCRYYAVGRCYYRENCKFSHE 480
           VLDN N          +PMDRMNLYPKVN + QEGY Q +CRY+AVG+CYYRE+CKFSH+
Sbjct: 421 VLDNRNH---------IPMDRMNLYPKVNHSAQEGYNQPQCRYFAVGKCYYRESCKFSHD 480

Query: 481 MTEDFVRSEKERFGH-HQMNQNARYCR 499
           MTEDFV+ EKER GH + M+QNAR+CR
Sbjct: 481 MTEDFVQREKERLGHYYHMHQNARHCR 498

[Close]

BLAST of HG10023422 vs. ExPASy TrEMBL
Match: A0A1S3CH36 (zinc finger CCCH domain-containing protein 62-like OS=Cucumis melo OX=3656 GN=LOC103500669 PE=4 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 2.9e-213
Identity = 395/507 (77.91%), Postives = 431/507 (85.01%), Query Frame = 0


Query: 1   MAFSGNLDTDSLRLDLEEPIDDNGESDSEYDSDDSLCDPSYSIEKKTNSKVSRTSIRKKS 60
           MAF  NL+TD  R DLEE IDDNGESD EY SDDS CDPSYSI+K+TNSK SRTSIRKKS
Sbjct: 1   MAFPRNLETDPSRFDLEELIDDNGESDDEYYSDDSECDPSYSIQKRTNSKTSRTSIRKKS 60

Query: 61  KPLEVVDMNLIVDTDIDDVAPDVPILNENDEKDIREVLSMIKAGKLEKLKVEQCKAYLRM 120
           KPL+ +DMNL  D+DIDD  P++PILNE DEKD  EVLS+IKAGKLEKLKVEQCK+YLR 
Sbjct: 61  KPLDALDMNLTGDSDIDDDVPNIPILNEKDEKDTLEVLSIIKAGKLEKLKVEQCKSYLRK 120

Query: 121 NGLRLTGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDVVMFEQKVYEMY 180
           NGLRL+GTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGD+VMFEQKVYEMY
Sbjct: 121 NGLRLSGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDIVMFEQKVYEMY 180

Query: 181 NIASRSSKGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKREKPLPPLHPLLIKGRN 240
           NIASRSSKGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSK EKPLPPLHPLLIKGRN
Sbjct: 181 NIASRSSKGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTLRQTWEDEGERQKVLMEKHARGSLARSNREARVVEKEKRKTHKENRKSKNEGFR 300
           LYRMKT+RQTWEDE ERQKVL EKHARGSLARSNREARV+EKEKRKTHKENR+S+ EG+R
Sbjct: 241 LYRMKTMRQTWEDERERQKVLKEKHARGSLARSNREARVIEKEKRKTHKENRESRKEGYR 300

Query: 301 DNPSQSNLSSAGTTLAESMAKLSVDSRKVVHRHQKEPLFGNSRKAFQHQHPENLTDQTK- 360
           +NPS+SNLSSAGT LAESMAKL+VDSR VVH+HQ+ P FGN  KA          DQ + 
Sbjct: 301 NNPSRSNLSSAGTMLAESMAKLTVDSRNVVHQHQERPSFGNLGKATDQTKSHMFIDQNRL 360

Query: 361 -SDH-----NRLPFEHQQMVD-TMQNNYYSQPQMKVNPPASLNIHPSIYRADHAASVVNK 420
            S H     NRLPF+HQ MVD TMQNNYYSQPQ K NPPAS NI PSIYR + AAS VNK
Sbjct: 361 PSQHQHMMDNRLPFQHQHMVDNTMQNNYYSQPQTKANPPASFNIQPSIYRTNPAASSVNK 420

Query: 421 VLDNTNRRSWDYYHSKLPMDRMNLYPKVNQTGQEGYKQQRCRYYAVGRCYYRENCKFSHE 480
           VLDN N          +PMDRMNLYPKVN + QEGY Q +CRY+AVG+CYYRE+CKFSH+
Sbjct: 421 VLDNRNH---------IPMDRMNLYPKVNHSAQEGYNQPQCRYFAVGKCYYRESCKFSHD 480

Query: 481 MTEDFVRSEKERFGH-HQMNQNARYCR 499
           MTEDFV+ EKER GH + M+QNAR+CR
Sbjct: 481 MTEDFVQREKERLGHYYHMHQNARHCR 498

[Close]

BLAST of HG10023422 vs. ExPASy TrEMBL
Match: A0A6J1GQF0 (zinc finger CCCH domain-containing protein 62-like OS=Cucurbita moschata OX=3662 GN=LOC111456567 PE=4 SV=1)

HSP 1 Score: 705.3 bits (1819), Expect = 1.8e-199
Identity = 381/508 (75.00%), Postives = 412/508 (81.10%), Query Frame = 0


Query: 1   MAFSGNLDTDSLRLDLEEPIDDNGESDSEYDSDDSLCDPSYSIEKKTNSKVSRTSIRKKS 60
           MAFSGN  TD  R +LEE IDD+GESD + DSDDS CDPSYS E+ TNSKVSR SIRKKS
Sbjct: 1   MAFSGNFVTDPRRFELEELIDDHGESDDQCDSDDSECDPSYSFEEDTNSKVSRISIRKKS 60

Query: 61  KPLEVVDMNLIVDTDIDDVAPDVPILNENDEKDIREVLSMIKAGKLEKLKVEQCKAYLRM 120
           KP EV D  LI    +DDV P+V  LNENDEKDI EVLS+IKAGKLEKLKVEQCKAYLR 
Sbjct: 61  KPSEVEDRELIAQAYLDDVVPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLRK 120

Query: 121 NGLRLTGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDVVMFEQKVYEMY 180
           NGLRLTGTKDVLIQRI EHLEILNGGGEKKYPEYSF VNCKGDACMGDVVMFEQKVYEMY
Sbjct: 121 NGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEMY 180

Query: 181 NIASRSSKGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKREKPLPPLHPLLIKGRN 240
           NIASRSS GPSCGTR VAGRIVKESYG+SKQQHTFTIEVLWSK EKPLPPLHPLLIKGRN
Sbjct: 181 NIASRSSIGPSCGTRIVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGRN 240

Query: 241 LYRMKTLRQTWEDEGERQKVLMEKHARGSLARSNREARVVEKEKRKTHKENRKSKNEGFR 300
           LYRMKT+RQTWEDEGERQKVLMEKHARGSLARS REARVVEKEKRKTH ENRKS+ EGF 
Sbjct: 241 LYRMKTMRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGFS 300

Query: 301 DNPSQSNLSSAGTTLAESMAKLSVDSRKVVHRHQKEPLFGNSRKAFQHQHPENLTDQTKS 360
           +NPSQSNLSSAGT LAE+M KLSVD+RK VH HQ+ PLFGNS +  +  +P   T QTKS
Sbjct: 301 ENPSQSNLSSAGTMLAETMVKLSVDARKAVHPHQERPLFGNSGEPPRQHNP---TKQTKS 360

Query: 361 ----DHNRLPFEHQQMVDTMQNNYYSQPQMKVN-PPASLNIHPSIYRADHAASVVNKVLD 420
               DH+R P++ Q M++ +QNNY+SQPQMK + PP S NIHPSIYRAD+ A        
Sbjct: 361 DVFIDHSRRPYQLQPMMNPVQNNYFSQPQMKADPPPVSYNIHPSIYRADYPA-------- 420

Query: 421 NTNRRSWDYYHSKLPMDRMNLYPKVNQTGQEGYKQQRCRYYAVGRCYYRENCKFSHEMTE 480
                      S+L M +MNLYPKVNQ  QE YKQQRCRYYAVGRC+Y ENCKFSHEMT+
Sbjct: 421 -----------SRLAMGQMNLYPKVNQHAQESYKQQRCRYYAVGRCHYGENCKFSHEMTQ 480

Query: 481 DFVRSEKERFG-----HHQMNQNARYCR 499
           DF   EKER G     HHQM+QNAR CR
Sbjct: 481 DFAGREKERLGRHHHHHHQMHQNARLCR 486

[Close]

BLAST of HG10023422 vs. ExPASy TrEMBL
Match: A0A6J1JT10 (zinc finger CCCH domain-containing protein 62-like OS=Cucurbita maxima OX=3661 GN=LOC111488621 PE=4 SV=1)

HSP 1 Score: 690.3 bits (1780), Expect = 6.1e-195
Identity = 378/509 (74.26%), Postives = 409/509 (80.35%), Query Frame = 0


Query: 1   MAFSGNLDTDSLRLDLEEPIDDNGESDSEYDSDDSLCDPSYSIEK-KTNSKVSRTSIRKK 60
           MAFSGN  TD  R +LEE ID++GESD + +SDDS CDPSY  E+  TNSKV   SIRKK
Sbjct: 1   MAFSGNFVTDPRRFELEELIDEHGESDDQCNSDDSECDPSYGFEEDNTNSKV---SIRKK 60

Query: 61  SKPLEVVDMNLIVDTDIDDVAPDVPILNENDEKDIREVLSMIKAGKLEKLKVEQCKAYLR 120
           SKP EV D  LI    +DDVAP+V  LNENDEKDI EVLS+IKAGKLEKLKVEQCKAYLR
Sbjct: 61  SKPSEVEDRELIAQAYLDDVAPEVLNLNENDEKDISEVLSIIKAGKLEKLKVEQCKAYLR 120

Query: 121 MNGLRLTGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDVVMFEQKVYEM 180
            NGLRLTGTKDVLIQRI EHLEILNGGGEKKYPEYSF VNCKGDACMGDVVMFEQKVYEM
Sbjct: 121 KNGLRLTGTKDVLIQRINEHLEILNGGGEKKYPEYSFTVNCKGDACMGDVVMFEQKVYEM 180

Query: 181 YNIASRSSKGPSCGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKREKPLPPLHPLLIKGR 240
           YNIASRSS GPSCGTR VAGRIVKESYG+SKQQHTFTIEVLWSK EKPLPPLHPLLIKGR
Sbjct: 181 YNIASRSSIGPSCGTRIVAGRIVKESYGASKQQHTFTIEVLWSKGEKPLPPLHPLLIKGR 240

Query: 241 NLYRMKTLRQTWEDEGERQKVLMEKHARGSLARSNREARVVEKEKRKTHKENRKSKNEGF 300
           NLYRMKTLRQTWEDEGERQKVLMEKHARGSLARS REARVVEKEKRKTH ENRKS+ EGF
Sbjct: 241 NLYRMKTLRQTWEDEGERQKVLMEKHARGSLARSTREARVVEKEKRKTHNENRKSRREGF 300

Query: 301 RDNPSQSNLSSAGTTLAESMAKLSVDSRKVVHRHQKEPLFGNSRKAFQHQHPENLTDQTK 360
            +NPS+SNLSSAGT LAE+M KLSVD+RK VH HQ++PLFG+S +  QH    N T QTK
Sbjct: 301 NENPSKSNLSSAGTMLAETMVKLSVDARKAVHPHQEKPLFGHSGEPRQH----NPTKQTK 360

Query: 361 S----DHNRLPFEHQQMVDTMQNNYYSQPQMKVN-PPASLNIHPSIYRADHAASVVNKVL 420
           S    DH+R P++ Q MV+ +QNNY+SQPQMK + PP S NIHPSIY ADH A       
Sbjct: 361 SDVFIDHSRRPYQLQPMVNPVQNNYFSQPQMKADPPPVSYNIHPSIYSADHPA------- 420

Query: 421 DNTNRRSWDYYHSKLPMDRMNLYPKVNQTGQEGYKQQRCRYYAVGRCYYRENCKFSHEMT 480
                       S+L M +MNLYPKVNQ  QE YKQQRCRYYAVGRC+Y ENCKFSHEM 
Sbjct: 421 ------------SRLAMGQMNLYPKVNQHAQESYKQQRCRYYAVGRCHYGENCKFSHEMA 480

Query: 481 EDFVRSEKERFG-----HHQMNQNARYCR 499
           +DF   EKER G     HHQM+QNAR CR
Sbjct: 481 QDFAGREKERLGRHHHHHHQMHQNARLCR 483

[Close]

BLAST of HG10023422 vs. TAIR 10
Match: AT5G66840.1 (SAP domain-containing protein )

HSP 1 Score: 201.1 bits (510), Expect = 2.2e-51
Identity = 130/294 (44.22%), Postives = 176/294 (59.86%), Query Frame = 0


Query: 74  TDIDDVAPDVPILNENDEKDIRE-VLSMIKAGK-LEKLKVEQCKAYLRMNGLRLTGTKDV 133
           T+ D  A ++ +  +ND+ D  + V  ++ AG  L+ + V++CKAYLR +GLRL+GTK V
Sbjct: 56  TESDVEADEIGVKGDNDDGDEDDKVTRLLTAGSDLKSVNVKECKAYLRKHGLRLSGTKPV 115

Query: 134 LIQRIKEHLEILNGGGEKKYPEYSFIVNCKGDACMGDVVMFEQKVYEMYNIASRSSKGPS 193
            I RI EH  I +G GE  YP+ SF +NCKGD C GD+V+F QKV+  Y    +S  G  
Sbjct: 116 CIDRILEHWRIKDGTGEAVYPKSSFAINCKGDVCKGDIVLFTQKVHHKYEKMKKS--GNI 175

Query: 194 CGTRTVAGRIVKESYGSSKQQHTFTIEVLWSKREKPLPPLHPLLIKGRNLYRMKTLRQTW 253
            G RTVAG++VKESYG++KQQHTFTIEVLW +  + LPPL+PLL+KGRNLYR+ TLRQ W
Sbjct: 176 MGRRTVAGQVVKESYGTAKQQHTFTIEVLWCEGTQKLPPLYPLLVKGRNLYRLMTLRQRW 235

Query: 254 EDEGERQKVLMEKHARGSLARSNREARVVEKEKRKTH---KENRKSKNEGFRDNPSQSNL 313
            +E +R KVL EKH RG+ AR     +V+ + K K+    K+ R  K  G    P Q   
Sbjct: 236 PNEEDRVKVLNEKHNRGAAAR-----KVMRERKIKSGYVLKDGRLQK-PGHVKKPCQ--- 295

Query: 314 SSAGTTLAESMAKLSVDSRKVVHRHQKEPLFGNSRKAFQHQ-HPENLTDQTKSD 362
               T   E    L+   R+    +     F N   +  H+ HP  LTD   ++
Sbjct: 296 --VKTRKNEKDENLTQRLRQNTPANHSLVAFPNQNPSQGHKNHPTQLTDMNPAN 336

The following BLAST results are available for this feature:

BLAST of HG10023422 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899462.1	3.9e-228	83.10	zinc finger CCCH domain-containing protein 62-like [Benincasa hispida]	[more]
XP_031744267.1	1.7e-220	79.88	zinc finger CCCH domain-containing protein 62 isoform X2 [Cucumis sativus]	[more]
XP_004141817.1	1.5e-219	79.92	zinc finger CCCH domain-containing protein 62 isoform X1 [Cucumis sativus] >KGN4...	[more]
XP_008462271.1	6.0e-213	77.91	PREDICTED: zinc finger CCCH domain-containing protein 62-like [Cucumis melo] >KA...	[more]
KAG6575426.1	1.3e-199	74.90	Zinc finger CCCH domain-containing protein 62, partial [Cucurbita argyrosperma s...	[more]

BLAST of HG10023422 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q338N2	2.8e-56	43.65	Zinc finger CCCH domain-containing protein 62 OS=Oryza sativa subsp. japonica OX...	[more]

BLAST of HG10023422 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCF3	7.1e-220	79.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G448770 PE=4 SV=1	[more]
A0A5A7V0Q9	2.9e-213	77.91	Zinc finger CCCH domain-containing protein 62-like OS=Cucumis melo var. makuwa O...	[more]
A0A1S3CH36	2.9e-213	77.91	zinc finger CCCH domain-containing protein 62-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1GQF0	1.8e-199	75.00	zinc finger CCCH domain-containing protein 62-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1JT10	6.1e-195	74.26	zinc finger CCCH domain-containing protein 62-like OS=Cucurbita maxima OX=3661 G...	[more]

BLAST of HG10023422 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66840.1	2.2e-51	44.22	SAP domain-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 270..290
None	No IPR available	GENE3D	2.30.30.1190		coord: 406..483 e-value: 9.0E-6 score: 27.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..313
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 262..299
None	No IPR available	PANTHER	PTHR35323	SAP DOMAIN-CONTAINING PROTEIN	coord: 9..453
None	No IPR available	PANTHER	PTHR35323	SAP DOMAIN-CONTAINING PROTEIN	coord: 449..481
None	No IPR available	PANTHER	PTHR35323:SF4	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 62-LIKE	coord: 449..481 coord: 9..453
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 447..473 e-value: 0.0093 score: 25.2
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 447..474 score: 14.041964
IPR003034	SAP domain	SMART	SM00513	sap_9	coord: 106..140 e-value: 4.1E-4 score: 29.7
IPR003034	SAP domain	PFAM	PF02037	SAP	coord: 106..140 e-value: 1.8E-10 score: 40.4
IPR003034	SAP domain	PROSITE	PS50800	SAP	coord: 106..140 score: 9.926171
IPR036361	SAP domain superfamily	GENE3D	1.10.720.30	SAP domain	coord: 95..150 e-value: 3.1E-7 score: 31.9
IPR036361	SAP domain superfamily	SUPERFAMILY	68906	SAP domain	coord: 96..141
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 447..475

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10023422.1	HG10023422.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044260	cellular macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding