HG10023415 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10023415
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Acyl carrier protein
Location	Chr05: 34019263 .. 34021714 (-)
RNA-Seq Expression	HG10023415
Synteny	HG10023415

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGTCCTTCGCTTCGTTGCCGCTTCCCACAACGCTTCCCTGCAACTCTTTGATAAGAAATAAGAGTAGTAGTCTATCTGCGAGAGTAGGTCTTCCACTCACACTAAATGCAAATTTTTGTTTTTTTTTAAAAAAAATAATTGTGATGGGTAGCAATTTTATAGATAATAATACCCAAGTGTATAACAACATTTTTTAAAAATTGTAAATATAGCAAAATCTATCACTGATAGACTTTAATGGTCTATCAATGACAGATCTCTATTAGCGTTAGAAGTCTATTAATGATAGACTCAAAATGTTGCTATATATGCTAATACTTTGAATCTGATTGTTATATTTGCAATTGTTCCTTAAAAAAAAACTAACAGTGCGTGGATGGTGGATGTGTGAAGATTTAAACATCTGATTGTGACTAAGAGAGTTTTGAGTTATAATAATGATAAATGGTGAAAATTAGTGTGATAAATTGGAGTAATATTGTAAAGAAGTTGAAATTGTGCAGGATGGTACTTTGTTTTGTGGACGGAGGCTGTTTCCCAACATGAAAATAGCAAAGGCTGCAAAAGGAGCATCCCCAAATCCCACCTTCAAATCAAAGATTTCTTGCTCCCTTGTACCTTTCTAAAACTCAACTTTAATTTCTTAGCCTAAATTATACGTGCATCCACATGTATATCTACTGTTTTAAAATGATTGTATTTGGCTTCCTTATCCTCTTAATTGTAATTTTACATTTCTAGAAAAATTATTTGAATTGTTAGTGAAATTCTAAAACCAAAAACAAAAATTTTAATCTCTCTTTTGGTAACAAAATAAAGAAATTCATAATTAGAAGTAGTATTTATAAACTTAATTTTTTAAAAAAAAACTAAAACAAAAAACTAAATAGAGACTTTTTAAAAAATAAAAAAAATAAAGAAACTATTTATACAAAATAGCAAAATTTTTAGATAGTTATGATAGACACTGATAGAAGTCTATCAAGATCTATTAGTGATAGAAATGATAGAAGTCTATCCATGTCTCTCAGTTTTTTTTTTGCTATTTTCTGTAAATAGTTTGACATTTTTTCTATTAGCTACCTAATGACTACTTTGTCTTAATGCTCTTGTTTCATATAAAATTAAAGGTTGTTTTCAAATATAGAAAAATGAGTAAGTTATTTACAAATATAAAAAAAATTTACTATCTATTTGAGATAGACACACGATCTATCATCAATAGTCAATGAAATGTGTTAGATAATTTCCCTAAAATTAAGGAATGTTTGGTCGGCGACTATTAAAAAATTTAAAAAAAAAGAAATTTAATGCAAAATAGATTCGTTGTAACTCTACTTGTTTCTCATTGTAATGGTAACAGATTTAGAATTTGAAGTACTAAAAATATGCCCAATCATTTCCACTTTTAGATCACAGTGTATTTAAATGCAACCCCAATATTTTTTAAGAAAAAAATTGACCAAACAATAATTTAATAATTTTCTTTGATTTAATGAATCTAAAAACAAAATAATTGAATCTGAACAATTTATTAAACAAGTCCCTGTTTTTTCCCCCTATTTATATAGATAGATAATCCATTCTAAAAAAGATCTAACTAACGTTTAAAAACTTTAAAAATCAGTCAATTATTTATATAAATAACTTTTCAGATTTAACACCCTTCTAATTAAATGTAATATTCTAGACAAACAACTTACAGTTCTCATAAAATTAAAGATTTCAAAAGTCTTTTCTTTTCATTAGGCAAAAATGTCAAGTATAATTTTTTTATGCATCGAAAATTTCAAAAAATATATTTTGTAAATATACAAAATAAAAAGAGAAATTACTATAAACAGAAAAAATATCAAACTATTTTATAAATAGAGAAAAATTTCACTGTCTCATAGACGATAGAATTCGATAGACAGTGAAACAATAAGGAAGAAAAAGGAAAGGAAACTTCTAATTCATAGTTCAACTTGGAAGATGAATGTGGATGAAAAAATTATAAACAAAAAGAACAAAATGGGAAACAGAACTAAAAGATTAGGAGAAAAAAATGGTGGGTTTTAATTAAGGGTGGAAATTAAGATGGGTGTGATGTAAAAAATGTGCAGGCCCAACCAGAAACACTGGAAGTTGTTCAAGAAATAATTGCCAAGCAACTCTCTCTGGAACAAAGCGCAGTGATCCCTCAAACAAAGTTTTCTGATTTGGGAGCTGATTCTCTTGACACCGTAAGTCAACCAAAAATTTTAAACCTAACAACACACAATTACAAGACAACCTAAAACTCTAAACCTATTACTAACATTAAAGGAACACTCACAGGTTGAGATCATGATGGCTTTGGAAGAGAAGTTTGGAGTATCCATTGGAGAAGGTGGAGCTGAGGGCATCTCTACCGTTCAAGACGCTGCCGATCTGATCGAGAAAGTCAAGGCATCCTCTGCAAATTAA

mRNA sequence

ATGTCGTCCTTCGCTTCGTTGCCGCTTCCCACAACGCTTCCCTGCAACTCTTTGATAAGAAATAAGAGTAGTAGTCTATCTGCGAGAGCCCAACCAGAAACACTGGAAGTTGTTCAAGAAATAATTGCCAAGCAACTCTCTCTGGAACAAAGCGCAGTGATCCCTCAAACAAAGTTTTCTGATTTGGGAGCTGATTCTCTTGACACCGAACACTCACAGGTTGAGATCATGATGGCTTTGGAAGAGAAGTTTGGAGTATCCATTGGAGAAGGTGGAGCTGAGGGCATCTCTACCGTTCAAGACGCTGCCGATCTGATCGAGAAAGTCAAGGCATCCTCTGCAAATTAA

Coding sequence (CDS)

ATGTCGTCCTTCGCTTCGTTGCCGCTTCCCACAACGCTTCCCTGCAACTCTTTGATAAGAAATAAGAGTAGTAGTCTATCTGCGAGAGCCCAACCAGAAACACTGGAAGTTGTTCAAGAAATAATTGCCAAGCAACTCTCTCTGGAACAAAGCGCAGTGATCCCTCAAACAAAGTTTTCTGATTTGGGAGCTGATTCTCTTGACACCGAACACTCACAGGTTGAGATCATGATGGCTTTGGAAGAGAAGTTTGGAGTATCCATTGGAGAAGGTGGAGCTGAGGGCATCTCTACCGTTCAAGACGCTGCCGATCTGATCGAGAAAGTCAAGGCATCCTCTGCAAATTAA

Protein sequence

MSSFASLPLPTTLPCNSLIRNKSSSLSARAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTEHSQVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN

Homology

[Close]

BLAST of HG10023415 vs. NCBI nr
Match: XP_008462263.1 (PREDICTED: acyl carrier protein-like isoform X2 [Cucumis melo])

HSP 1 Score: 169.1 bits (427), Expect = 2.2e-38
Identity = 99/120 (82.50%), Postives = 105/120 (87.50%), Query Frame = 0


Query: 2   SSFASLPLPTTLPCNSLIRNKS------SSLSARAQPETLEVVQEIIAKQLSLEQSAVIP 61
           S+FAS PLP TL C S +RNKS      ++LSA+AQPETLEVVQEIIAKQLSLEQSAVIP
Sbjct: 3   STFASSPLPMTLQCTSSMRNKSTTLYLHNNLSAKAQPETLEVVQEIIAKQLSLEQSAVIP 62

Query: 62  QTKFSDLGADSLDTEHSQVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN 116
           QTKFSDLGADSLDT    VEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSA+
Sbjct: 63  QTKFSDLGADSLDT----VEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS 118

[Close]

BLAST of HG10023415 vs. NCBI nr
Match: XP_038897463.1 (acyl carrier protein-like [Benincasa hispida])

HSP 1 Score: 154.5 bits (389), Expect = 5.7e-34
Identity = 102/157 (64.97%), Postives = 104/157 (66.24%), Query Frame = 0


Query: 1   MSSFASLPLPTTLPCNSLIRNKS-----SSLSAR-------------------------- 60
           MSSF SLPL TTLPC    RNKS     SSLSAR                          
Sbjct: 1   MSSFVSLPLLTTLPCTPSTRNKSTILHLSSLSARDGTLLCGQRLFSNMRMAKASKGASAL 60

Query: 61  -----------AQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTEHSQVEIMM 116
                      AQPETL+VVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDT    VEIMM
Sbjct: 61  PTFKSNISCSLAQPETLQVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDT----VEIMM 120

[Close]

BLAST of HG10023415 vs. NCBI nr
Match: KAA0059374.1 (acyl carrier protein 1 [Cucumis melo var. makuwa] >TYK03952.1 acyl carrier protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 154.5 bits (389), Expect = 5.7e-34
Identity = 99/158 (62.66%), Postives = 104/158 (65.82%), Query Frame = 0


Query: 2   SSFASLPLPTTLPCNSLIRNKSSSLSAR-------------------------------- 61
           S+FAS PLP TLPC S +RNKS++L  R                                
Sbjct: 3   STFASSPLPMTLPCTSSMRNKSTTLYLRNNLSAKDGSLFRGERVFPSMKMAKAAKGASLL 62

Query: 62  ------------AQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTEHSQVEIM 116
                       AQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDT    VEIM
Sbjct: 63  SKSFKSKICCSVAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDT----VEIM 122

[Close]

BLAST of HG10023415 vs. NCBI nr
Match: KAE8646494.1 (hypothetical protein Csa_016687 [Cucumis sativus])

HSP 1 Score: 153.3 bits (386), Expect = 1.3e-33
Identity = 101/158 (63.92%), Postives = 105/158 (66.46%), Query Frame = 0


Query: 2   SSFASLPLPTTLPCNSLIRNKS------SSLSAR-------------------------- 61
           SSFAS PLPTT  C S +RNKS      +SLSAR                          
Sbjct: 3   SSFASSPLPTTFTCTSSMRNKSTVLYSRNSLSARDGSLFCGERVFPSMKVAKAAKGASSL 62

Query: 62  ------------AQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTEHSQVEIM 116
                       AQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDT    VEIM
Sbjct: 63  SKSFRSKICCSVAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDT----VEIM 122

[Close]

BLAST of HG10023415 vs. NCBI nr
Match: XP_008462262.1 (PREDICTED: acyl carrier protein 1, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 150.2 bits (378), Expect = 1.1e-32
Identity = 99/158 (62.66%), Postives = 105/158 (66.46%), Query Frame = 0


Query: 2   SSFASLPLPTTLPCNSLIRNKS------SSLSAR-------------------------- 61
           S+FAS PLP TL C S +RNKS      ++LSA+                          
Sbjct: 3   STFASSPLPMTLQCTSSMRNKSTTLYLHNNLSAKDGSLFRGERVFPSMKMAKAAKGASLL 62

Query: 62  ------------AQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTEHSQVEIM 116
                       AQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDT    VEIM
Sbjct: 63  SKSFKSKICCSVAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDT----VEIM 122

[Close]

BLAST of HG10023415 vs. ExPASy Swiss-Prot
Match: P52414 (Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 8.1e-15
Identity = 55/113 (48.67%), Postives = 74/113 (65.49%), Query Frame = 0


Query: 1   MSSFASLPLPTTLPCNSLIRNKSSS---LSARAQPETLEVVQEIIAKQLSL-EQSAVIPQ 60
           +SS  S+ LP +      +R+   S   +S +A+PET+  V  I+ KQL+L + S V   
Sbjct: 25  ISSLRSVSLPVSRKSFPSLRSSKGSFARVSCQAKPETVAKVCRIVKKQLALPDDSEVNGL 84

Query: 61  TKFSDLGADSLDTEHSQVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV 110
           +KFS LGADSLDT    VEI+M LEE+FG+S+ E  A+ I TVQDAADLIEK+
Sbjct: 85  SKFSALGADSLDT----VEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKL 133

[Close]

BLAST of HG10023415 vs. ExPASy Swiss-Prot
Match: P93092 (Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-14
Identity = 53/112 (47.32%), Postives = 77/112 (68.75%), Query Frame = 0


Query: 1   MSSFASLPLPTTLPCNSLIRNKSSS--LSARAQPETLEVVQEIIAKQLSL-EQSAVIPQT 60
           +S+  S+ LP      + +R +S+   +   A+PET+E V  I+ KQL+L + SAV  ++
Sbjct: 23  VSNLRSVSLPIKGKSFAPLRMRSARFVVCCAAKPETVEKVCAIVKKQLALPDDSAVTGES 82

Query: 61  KFSDLGADSLDTEHSQVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV 110
           KF+ LGADSLDT    VEI+M LEE+FG+++ E  A+ I+TVQDAADLIEK+
Sbjct: 83  KFATLGADSLDT----VEIVMGLEEEFGINVEEESAQSIATVQDAADLIEKL 130

[Close]

BLAST of HG10023415 vs. ExPASy Swiss-Prot
Match: P52411 (Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-14
Identity = 55/114 (48.25%), Postives = 75/114 (65.79%), Query Frame = 0


Query: 1   MSSFASLPLPTTLPCNSLIRNKSSS----LSARAQPETLEVVQEIIAKQLSL-EQSAVIP 60
           +SS  S+ LP +      +++  SS    +S +A+PET+  V  I+ KQL+L + S V  
Sbjct: 25  ISSLRSVSLPVSRKSFPSLKSSKSSFALRVSCQAKPETVAKVCGIVKKQLALPDDSEVNG 84

Query: 61  QTKFSDLGADSLDTEHSQVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKV 110
            +KFS LGADSLDT    VEI+M LEE+FG+S+ E  A+ I TVQDAADLIEK+
Sbjct: 85  LSKFSALGADSLDT----VEIVMGLEEEFGISVEEESAQSIQTVQDAADLIEKL 134

[Close]

BLAST of HG10023415 vs. ExPASy Swiss-Prot
Match: P32887 (Acyl carrier protein, chloroplastic OS=Brassica napus OX=3708 GN=ACL1.A3 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.4e-14
Identity = 45/86 (52.33%), Postives = 65/86 (75.58%), Query Frame = 0


Query: 25  SLSARAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTEHSQVEIMMALEEK 84
           S+S  A+PET+E V +I+ KQLSL +   V+ +TKF+DLGADSLDT    VEI+M LEE+
Sbjct: 48  SVSCAAKPETIEKVSKIVKKQLSLKDDQKVVAETKFADLGADSLDT----VEIVMGLEEE 107

Query: 85  FGVSIGEGGAEGISTVQDAADLIEKV 110
           F + + E  A+ I+TV++AA+LIE++
Sbjct: 108 FDIEMAEEKAQKIATVEEAAELIEEL 129

[Close]

BLAST of HG10023415 vs. ExPASy Swiss-Prot
Match: P07088 (Acyl carrier protein SF2, chloroplastic OS=Brassica campestris OX=3711 GN=Acl1.1 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.4e-14
Identity = 45/86 (52.33%), Postives = 65/86 (75.58%), Query Frame = 0


Query: 25  SLSARAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTEHSQVEIMMALEEK 84
           S+S  A+PET+E V +I+ KQLSL +   V+ +TKF+DLGADSLDT    VEI+M LEE+
Sbjct: 48  SISCAAKPETVEKVSKIVKKQLSLKDDQKVVAETKFADLGADSLDT----VEIVMGLEEE 107

Query: 85  FGVSIGEGGAEGISTVQDAADLIEKV 110
           F + + E  A+ I+TV++AA+LIE++
Sbjct: 108 FDIEMAEEKAQKIATVEEAAELIEEL 129

[Close]

BLAST of HG10023415 vs. ExPASy TrEMBL
Match: A0A1S3CGH5 (Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103500663 PE=3 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.1e-38
Identity = 99/120 (82.50%), Postives = 105/120 (87.50%), Query Frame = 0


Query: 2   SSFASLPLPTTLPCNSLIRNKS------SSLSARAQPETLEVVQEIIAKQLSLEQSAVIP 61
           S+FAS PLP TL C S +RNKS      ++LSA+AQPETLEVVQEIIAKQLSLEQSAVIP
Sbjct: 3   STFASSPLPMTLQCTSSMRNKSTTLYLHNNLSAKAQPETLEVVQEIIAKQLSLEQSAVIP 62

Query: 62  QTKFSDLGADSLDTEHSQVEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN 116
           QTKFSDLGADSLDT    VEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSA+
Sbjct: 63  QTKFSDLGADSLDT----VEIMMALEEKFGVSIGEGGAEGISTVQDAADLIEKVKASSAS 118

[Close]

BLAST of HG10023415 vs. ExPASy TrEMBL
Match: A0A5A7UWB3 (Acyl carrier protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G001490 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.8e-34
Identity = 99/158 (62.66%), Postives = 104/158 (65.82%), Query Frame = 0


Query: 2   SSFASLPLPTTLPCNSLIRNKSSSLSAR-------------------------------- 61
           S+FAS PLP TLPC S +RNKS++L  R                                
Sbjct: 3   STFASSPLPMTLPCTSSMRNKSTTLYLRNNLSAKDGSLFRGERVFPSMKMAKAAKGASLL 62

Query: 62  ------------AQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTEHSQVEIM 116
                       AQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDT    VEIM
Sbjct: 63  SKSFKSKICCSVAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDT----VEIM 122

[Close]

BLAST of HG10023415 vs. ExPASy TrEMBL
Match: A0A1S3CGK8 (Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103500663 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 5.2e-33
Identity = 99/158 (62.66%), Postives = 105/158 (66.46%), Query Frame = 0


Query: 2   SSFASLPLPTTLPCNSLIRNKS------SSLSAR-------------------------- 61
           S+FAS PLP TL C S +RNKS      ++LSA+                          
Sbjct: 3   STFASSPLPMTLQCTSSMRNKSTTLYLHNNLSAKDGSLFRGERVFPSMKMAKAAKGASLL 62

Query: 62  ------------AQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTEHSQVEIM 116
                       AQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDT    VEIM
Sbjct: 63  SKSFKSKICCSVAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDT----VEIM 122

[Close]

BLAST of HG10023415 vs. ExPASy TrEMBL
Match: A0A6J1HKE0 (Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111464348 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 1.2e-32
Identity = 81/94 (86.17%), Postives = 88/94 (93.62%), Query Frame = 0


Query: 22  KSSSLSARAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTEHSQVEIMMALE 81
           KS+   + AQPET++VVQEIIAKQLSLEQS VIPQTKFS+LGADSLDTE+SQVEIMMALE
Sbjct: 57  KSNISCSLAQPETMQVVQEIIAKQLSLEQSPVIPQTKFSELGADSLDTEYSQVEIMMALE 116

Query: 82  EKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN 116
           EKFGVSIGEGGAEGISTVQDAADLIEKVK SSA+
Sbjct: 117 EKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS 150

[Close]

BLAST of HG10023415 vs. ExPASy TrEMBL
Match: A0A6J1KIN6 (Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111494313 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.9e-31
Identity = 79/94 (84.04%), Postives = 86/94 (91.49%), Query Frame = 0


Query: 22  KSSSLSARAQPETLEVVQEIIAKQLSLEQSAVIPQTKFSDLGADSLDTEHSQVEIMMALE 81
           KS+   + AQPET++VVQEIIAKQLSLE SAVIPQTKFS+LGADSLDTE+ QVEIMM LE
Sbjct: 58  KSNISCSLAQPETMQVVQEIIAKQLSLELSAVIPQTKFSELGADSLDTEYLQVEIMMGLE 117

Query: 82  EKFGVSIGEGGAEGISTVQDAADLIEKVKASSAN 116
           EKFGVSIGEGGAEGISTVQDAADLIEKVK SSA+
Sbjct: 118 EKFGVSIGEGGAEGISTVQDAADLIEKVKTSSAS 151

[Close]

BLAST of HG10023415 vs. TAIR 10
Match: AT3G05020.1 (acyl carrier protein 1 )

HSP 1 Score: 74.7 bits (182), Expect = 5.4e-14
Identity = 45/92 (48.91%), Postives = 64/92 (69.57%), Query Frame = 0


Query: 19  IRNKSSSLSARAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTEHSQVEIM 78
           I ++  S+S  A+ ET+E V  I+ KQLSL     V+ +TKF+DLGADSLDT    VEI+
Sbjct: 45  IPSRRLSVSCAAKQETIEKVSAIVKKQLSLTPDKKVVAETKFADLGADSLDT----VEIV 104

Query: 79  MALEEKFGVSIGEGGAEGISTVQDAADLIEKV 110
           M LEE+F + + E  A+ I+TV+ AA+LIE++
Sbjct: 105 MGLEEEFNIQMAEEKAQKIATVEQAAELIEEL 132

[Close]

BLAST of HG10023415 vs. TAIR 10
Match: AT5G27200.1 (acyl carrier protein 5 )

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-13
Identity = 44/86 (51.16%), Postives = 62/86 (72.09%), Query Frame = 0


Query: 25  SLSARAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTEHSQVEIMMALEEK 84
           ++S   + ET+E V EI+ KQLSL +   V   TKF++LGADSLDT    VEI+M LEE+
Sbjct: 52  AVSCAVKQETVEKVSEIVKKQLSLTDDQKVTAGTKFTELGADSLDT----VEIVMGLEEE 111

Query: 85  FGVSIGEGGAEGISTVQDAADLIEKV 110
           FG+++ E  A+ I+TVQ AA+LIE++
Sbjct: 112 FGITMAEERAKEIATVQQAAELIEEL 133

[Close]

BLAST of HG10023415 vs. TAIR 10
Match: AT4G25050.2 (acyl carrier protein 4 )

HSP 1 Score: 73.2 bits (178), Expect = 1.6e-13
Identity = 43/91 (47.25%), Postives = 61/91 (67.03%), Query Frame = 0


Query: 26  LSARAQPETLEVVQEIIAKQLSLEQSA-VIPQTKFSDLGADSLDT--------EHSQVEI 85
           +S  A+ ET++ V +I+ +QL+L     +  ++KFS LGADSLDT         H  VEI
Sbjct: 47  ISCAAKAETVQKVSDIVKEQLALAADVPLTAESKFSALGADSLDTVCYTLSVSYHCHVEI 106

Query: 86  MMALEEKFGVSIGEGGAEGISTVQDAADLIE 108
           +MALEEKF +S+ E  A+ I+T+Q+AADLIE
Sbjct: 107 VMALEEKFNISVEESDAQNITTIQEAADLIE 137

[Close]

BLAST of HG10023415 vs. TAIR 10
Match: AT4G25050.1 (acyl carrier protein 4 )

HSP 1 Score: 72.8 bits (177), Expect = 2.0e-13
Identity = 42/83 (50.60%), Postives = 60/83 (72.29%), Query Frame = 0


Query: 26  LSARAQPETLEVVQEIIAKQLSLEQSA-VIPQTKFSDLGADSLDTEHSQVEIMMALEEKF 85
           +S  A+ ET++ V +I+ +QL+L     +  ++KFS LGADSLDT    VEI+MALEEKF
Sbjct: 47  ISCAAKAETVQKVSDIVKEQLALAADVPLTAESKFSALGADSLDT----VEIVMALEEKF 106

Query: 86  GVSIGEGGAEGISTVQDAADLIE 108
            +S+ E  A+ I+T+Q+AADLIE
Sbjct: 107 NISVEESDAQNITTIQEAADLIE 125

[Close]

BLAST of HG10023415 vs. TAIR 10
Match: AT1G54580.1 (acyl carrier protein 2 )

HSP 1 Score: 70.5 bits (171), Expect = 1.0e-12
Identity = 42/86 (48.84%), Postives = 60/86 (69.77%), Query Frame = 0


Query: 25  SLSARAQPETLEVVQEIIAKQLSL-EQSAVIPQTKFSDLGADSLDTEHSQVEIMMALEEK 84
           ++S  A+PET++ V  ++ KQLSL E   +   TKF+ LGADSLDT    VEI+M LEE+
Sbjct: 49  TVSCAAKPETVDKVCAVVRKQLSLKEADEITAATKFAALGADSLDT----VEIVMGLEEE 108

Query: 85  FGVSIGEGGAEGISTVQDAADLIEKV 110
           FG+ + E  A+ I+TV+ AA LIE++
Sbjct: 109 FGIEMAEEKAQSIATVEQAAALIEEL 130

The following BLAST results are available for this feature:

BLAST of HG10023415 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008462263.1	2.2e-38	82.50	PREDICTED: acyl carrier protein-like isoform X2 [Cucumis melo]	[more]
XP_038897463.1	5.7e-34	64.97	acyl carrier protein-like [Benincasa hispida]	[more]
KAA0059374.1	5.7e-34	62.66	acyl carrier protein 1 [Cucumis melo var. makuwa] >TYK03952.1 acyl carrier prote...	[more]
KAE8646494.1	1.3e-33	63.92	hypothetical protein Csa_016687 [Cucumis sativus]	[more]
XP_008462262.1	1.1e-32	62.66	PREDICTED: acyl carrier protein 1, chloroplastic-like isoform X1 [Cucumis melo]	[more]

BLAST of HG10023415 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P52414	8.1e-15	48.67	Acyl carrier protein 4, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1 PE=3 ...	[more]
P93092	1.4e-14	47.32	Acyl carrier protein 1, chloroplastic OS=Casuarina glauca OX=3522 GN=ACP1 PE=2 S...	[more]
P52411	1.4e-14	48.25	Acyl carrier protein 1, chloroplastic OS=Cuphea lanceolata OX=3930 GN=ACL1.1 PE=...	[more]
P32887	2.4e-14	52.33	Acyl carrier protein, chloroplastic OS=Brassica napus OX=3708 GN=ACL1.A3 PE=2 SV...	[more]
P07088	2.4e-14	52.33	Acyl carrier protein SF2, chloroplastic OS=Brassica campestris OX=3711 GN=Acl1.1...	[more]

BLAST of HG10023415 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CGH5	1.1e-38	82.50	Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103500663 PE=3 SV=1	[more]
A0A5A7UWB3	2.8e-34	62.66	Acyl carrier protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347...	[more]
A0A1S3CGK8	5.2e-33	62.66	Acyl carrier protein OS=Cucumis melo OX=3656 GN=LOC103500663 PE=3 SV=1	[more]
A0A6J1HKE0	1.2e-32	86.17	Acyl carrier protein OS=Cucurbita moschata OX=3662 GN=LOC111464348 PE=3 SV=1	[more]
A0A6J1KIN6	2.9e-31	84.04	Acyl carrier protein OS=Cucurbita maxima OX=3661 GN=LOC111494313 PE=3 SV=1	[more]

BLAST of HG10023415 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G05020.1	5.4e-14	48.91	acyl carrier protein 1	[more]
AT5G27200.1	1.2e-13	51.16	acyl carrier protein 5	[more]
AT4G25050.2	1.6e-13	47.25	acyl carrier protein 4	[more]
AT4G25050.1	2.0e-13	50.60	acyl carrier protein 4	[more]
AT1G54580.1	1.0e-12	48.84	acyl carrier protein 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003231	Acyl carrier protein (ACP)	TIGRFAM	TIGR00517	TIGR00517	coord: 33..108 e-value: 1.1E-21 score: 74.4
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 33..110 score: 14.700018
IPR036736	ACP-like superfamily	GENE3D	1.10.1200.10		coord: 28..110 e-value: 8.4E-22 score: 79.3
IPR036736	ACP-like superfamily	SUPERFAMILY	47336	ACP-like	coord: 32..109
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 37..106 e-value: 1.0E-8 score: 35.4
IPR009081	Phosphopantetheine binding ACP domain	PROSITE	PS50075	CARRIER	coord: 32..110 score: 12.593304
None	No IPR available	PANTHER	PTHR46153:SF2	ACYL CARRIER PROTEIN	coord: 21..113
IPR044813	Acyl carrier protein, chloroplastic	PANTHER	PTHR46153	ACYL CARRIER PROTEIN	coord: 21..113

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10023415.1	HG10023415.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0009416	response to light stimulus
molecular_function	GO:0000036	acyl carrier activity
molecular_function	GO:0031177	phosphopantetheine binding