HG10023339 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTTATCCAGCCGTTCCCCTTCACAGAGCCACCGCCTTCCGCTTTGCCGGCCCCGGAAGGCCGCTTGTAGCGGCGGCACAGGAGGTCGTCCGGCAGCAGAAAAGTGGCGGTGGTGGTGGAAACAAGTGTATTTGCTCGCCGACGACCCACCCAGGTTCTTTCAGATGTAGATTTCATCAAGGAGATTATAAATGGGTTAGTCGGTCGAGGTTTTCAAAACCCAACACGGTTTAACCTTTGTGTATATATATATATATACAAAACTTATATATAGGTGAAATTAGAAATATGTGAATTGACTCTGTTTTTTAAATTAAATAGGCTGCAACTTGATTTAATGTGTTGTGATGTTTTGGTTCAGAATTGTGTTGAAATTAAGTGA ATGTGTTATCCAGCCGTTCCCCTTCACAGAGCCACCGCCTTCCGCTTTGCCGGCCCCGGAAGGCCGCTTGTAGCGGCGGCACAGGAGGTCGTCCGGCAGCAGAAAAGTGGCGGTGGTGGTGGAAACAAGTGTATTTGCTCGCCGACGACCCACCCAGGTTCTTTCAGATGTAGATTTCATCAAGGAGATTATAAATGGAATTGTGTTGAAATTAAGTGA ATGTGTTATCCAGCCGTTCCCCTTCACAGAGCCACCGCCTTCCGCTTTGCCGGCCCCGGAAGGCCGCTTGTAGCGGCGGCACAGGAGGTCGTCCGGCAGCAGAAAAGTGGCGGTGGTGGTGGAAACAAGTGTATTTGCTCGCCGACGACCCACCCAGGTTCTTTCAGATGTAGATTTCATCAAGGAGATTATAAATGGAATTGTGTTGAAATTAAGTGA MCYPAVPLHRATAFRFAGPGRPLVAAAQEVVRQQKSGGGGGNKCICSPTTHPGSFRCRFHQGDYKWNCVEIK Homology
BLAST of HG10023339 vs. NCBI nr
Match: KGN45357.1 (hypothetical protein Csa_016243 [Cucumis sativus]) HSP 1 Score: 112.1 bits (279), Expect = 2.0e-21 Identity = 49/66 (74.24%), Postives = 54/66 (81.82%), Query Frame = 0
BLAST of HG10023339 vs. NCBI nr
Match: KAF8393354.1 (hypothetical protein HHK36_021597 [Tetracentron sinense]) HSP 1 Score: 67.4 bits (163), Expect = 5.8e-08 Identity = 37/80 (46.25%), Postives = 46/80 (57.50%), Query Frame = 0
BLAST of HG10023339 vs. NCBI nr
Match: XP_022846371.1 (uncharacterized protein LOC111369102 [Olea europaea var. sylvestris] >CAA2987260.1 Hypothetical predicted protein [Olea europaea subsp. europaea]) HSP 1 Score: 65.9 bits (159), Expect = 1.7e-07 Identity = 36/88 (40.91%), Postives = 45/88 (51.14%), Query Frame = 0
BLAST of HG10023339 vs. NCBI nr
Match: KAG5537670.1 (hypothetical protein RHGRI_024950 [Rhododendron griersonianum]) HSP 1 Score: 64.7 bits (156), Expect = 3.7e-07 Identity = 30/60 (50.00%), Postives = 34/60 (56.67%), Query Frame = 0
BLAST of HG10023339 vs. NCBI nr
Match: KAG8656900.1 (hypothetical protein MANES_03G019500v8 [Manihot esculenta]) HSP 1 Score: 63.9 bits (154), Expect = 6.4e-07 Identity = 37/76 (48.68%), Postives = 41/76 (53.95%), Query Frame = 0
BLAST of HG10023339 vs. ExPASy TrEMBL
Match: A0A0A0KAE1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G446750 PE=4 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 9.9e-22 Identity = 49/66 (74.24%), Postives = 54/66 (81.82%), Query Frame = 0
BLAST of HG10023339 vs. ExPASy TrEMBL
Match: A0A2C9W3Q9 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G019500 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.1e-07 Identity = 37/76 (48.68%), Postives = 41/76 (53.95%), Query Frame = 0
BLAST of HG10023339 vs. ExPASy TrEMBL
Match: M1A3Y8 (Uncharacterized protein OS=Solanum tuberosum OX=4113 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 9.0e-07 Identity = 31/68 (45.59%), Postives = 35/68 (51.47%), Query Frame = 0
BLAST of HG10023339 vs. ExPASy TrEMBL
Match: A0A022QBQ3 (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a018247mg PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 9.0e-07 Identity = 34/80 (42.50%), Postives = 42/80 (52.50%), Query Frame = 0
BLAST of HG10023339 vs. ExPASy TrEMBL
Match: A0A1R3GJ21 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_34908 PE=4 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.5e-06 Identity = 33/71 (46.48%), Postives = 41/71 (57.75%), Query Frame = 0
BLAST of HG10023339 vs. TAIR 10
Match: AT1G52342.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 56.2 bits (134), Expect = 1.2e-08 Identity = 20/35 (57.14%), Postives = 26/35 (74.29%), Query Frame = 0
BLAST of HG10023339 vs. TAIR 10
Match: AT3G13227.1 (serine-rich protein-related ) HSP 1 Score: 48.1 bits (113), Expect = 3.4e-06 Identity = 20/42 (47.62%), Postives = 26/42 (61.90%), Query Frame = 0
BLAST of HG10023339 vs. TAIR 10
Match: AT5G20370.1 (serine-rich protein-related ) HSP 1 Score: 46.2 bits (108), Expect = 1.3e-05 Identity = 16/19 (84.21%), Postives = 18/19 (94.74%), Query Frame = 0
BLAST of HG10023339 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 43.9 bits (102), Expect = 6.4e-05 Identity = 15/18 (83.33%), Postives = 17/18 (94.44%), Query Frame = 0
BLAST of HG10023339 vs. TAIR 10
Match: AT1G67910.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1). ) HSP 1 Score: 43.9 bits (102), Expect = 6.4e-05 Identity = 15/18 (83.33%), Postives = 17/18 (94.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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