HG10023326 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10023326
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	nuclear pore complex protein NUP50A-like
Location	Chr05: 33102450 .. 33104316 (-)
RNA-Seq Expression	HG10023326
Synteny	HG10023326

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGATGCTGAAAATGCAACATCTACAAAAAAGAGGGCTGCTGGAAGGGAGCTATCACGAGATAACCCTGGGCTTGATGATGAAGAAGATGTTTCTGAGCAGGAGACTGGAACTTTCAAGCGGGCTAGTGAAGAGGTGCTAGCCACGAGAAGAATTGTCAAAGTACGTCGTGGTCCAACTGCCTCTGCCCCATCTTCAAATCCTTTTGCTGGAATACGCTTGGTACCTCCAACTGAAAATAGTGGAAGTGCTGCAGAAGTTAAAAGTGATACGCAGGCAGCTGGTGAGAAAGCAAGTTCAGATGAGGCAAATGGAAAGGATGTTTCCAATGAAGGGACTCAAAAAGATGGGGATCATAGTGATGAGCCAGCCGAATGTAAAATTGACACATCAGAGGTTGAATCTGTTCCAAATGTGCAGAATGTTGATCAGAATAGCACTGTTGTAAGCAAACTTGCCATATCTAAGGTAGATGATAACCTAGTTGCTGAAAGCAATAAGATTGAAAATGAAGAACCAGCGGGAGGAGATAAGACTGGCAATGAGGAACTTGTAAGAGTCGCTGAGAAGGAAGCTGAGAATGATGAATGTGTAAGTGTTGGTAAGAATGAGAATGAGGATCCTGCGAGAGGTGATAAGAATGAAAATGAGGATCCTGCAAGAGGTGATAAGAATGCAAATGAAGAGCCCAGTGAAGGAAATGAGATACAGAACAAGGAAACTGGGGAACAAGAAAAAACAGAAAATGAAGAAGACAAAGAAGACAAAAGTGAAGCAGAACCTAGTAAGGAGGCTGCTCCTTTGAACTCGTTCCAACAATTATCAAGCAGCCAGAATGCCTTCACAGGTCTTGCCGGTACTGGATTTTCGACATCTACGTTCTCGTTTGGTAATATACCCAAGGATGGGGTTGGCCTAACTACTAGTTTTGGTCTCTCTAATAATGGTAGCTCGGCCCTCTTTGGTACTTCAGGGTCTTCCATTGTTTCCAAGAGTGAGAAAAGTGGCTTTCCATCGATGCAAGAGGTTGCAGTTGAAACTGGTGAAGAAAATGAAAAGGTGGTTTTCAATGCTGATTCTATATTGTTTGAGTTTATTGATGGATCTTGGAAGGAACGTGGAAAGGGGGAGCTGAAAGTTAACGTCCCTACAAGTGGGACTGGCAGAGCGAGGATTGTTATGAGGGCTAGAGGAAATTACAGGTTAATTTTGAATGCAAGTCTTTACCCTGACATGAAACTCACAAACATGGACAAGAAAGGCATCACCTTTGCCTGCATGAACAGCACCAGCGAAGGGAAGGACGGACTCTCAACATTTGGTGTGAAGTTCAAGGATGTATCCATAGTGGAGGAGTTTCGAGCAGCAGTCACTGAGCATAAAGGTAAAGCTTCTTCTACAGTTCTGAAAACGCCCGAGAATTCTCCATAAGGACTCGATTATCTGAAACATATACTTGGTGAAGAAAAGCTGCATATTTTCTGCTCTGAAGTGGAGTATCTATCAGAGGGTTATCCTACAGCTCGAGCGAGTAGTTTTTTCGGTTCGGCATTTCATAAGCCATTATGTAGCAGAGTCATAGAATCTTACTCATTTTGTTGTAGCTTTATTTGTTATCATAGACTCCTTTTCTGCTCATATCTTGGATGGAACATATCTTCAGACTGAAAATGCTCCTAAACCATGGGATTGGCAGAATCTCATAATTGTCCATTTAACTTTGCGATATGAACCAGCTTTTGTGCCCTCTAGATTGAGTACTTTCTTCACATATAGAAAGGCAAAAAGGAAAGAAATGGAAAATGCTACTTACTGTTGTTTGGATATTGGACCATCACGATATCTCAAGTCTACTGCCTATTGA

mRNA sequence

ATGGGGGATGCTGAAAATGCAACATCTACAAAAAAGAGGGCTGCTGGAAGGGAGCTATCACGAGATAACCCTGGGCTTGATGATGAAGAAGATGTTTCTGAGCAGGAGACTGGAACTTTCAAGCGGGCTAGTGAAGAGGTGCTAGCCACGAGAAGAATTGTCAAAGTACGTCGTGGTCCAACTGCCTCTGCCCCATCTTCAAATCCTTTTGCTGGAATACGCTTGGTACCTCCAACTGAAAATAGTGGAAGTGCTGCAGAAGTTAAAAGTGATACGCAGGCAGCTGGTGAGAAAGCAAGTTCAGATGAGGCAAATGGAAAGGATGTTTCCAATGAAGGGACTCAAAAAGATGGGGATCATAGTGATGAGCCAGCCGAATGTAAAATTGACACATCAGAGGTTGAATCTGTTCCAAATGTGCAGAATGTTGATCAGAATAGCACTGTTGTAAGCAAACTTGCCATATCTAAGGTAGATGATAACCTAGTTGCTGAAAGCAATAAGATTGAAAATGAAGAACCAGCGGGAGGAGATAAGACTGGCAATGAGGAACTTGTAAGAGTCGCTGAGAAGGAAGCTGAGAATGATGAATGTGTAAGTGTTGGTAAGAATGAGAATGAGGATCCTGCGAGAGGTGATAAGAATGAAAATGAGGATCCTGCAAGAGGTGATAAGAATGCAAATGAAGAGCCCAGTGAAGGAAATGAGATACAGAACAAGGAAACTGGGGAACAAGAAAAAACAGAAAATGAAGAAGACAAAGAAGACAAAAGTGAAGCAGAACCTAGTAAGGAGGCTGCTCCTTTGAACTCGTTCCAACAATTATCAAGCAGCCAGAATGCCTTCACAGGTCTTGCCGGTACTGGATTTTCGACATCTACGTTCTCGTTTGGTAATATACCCAAGGATGGGGTTGGCCTAACTACTAGTTTTGGTCTCTCTAATAATGGTAGCTCGGCCCTCTTTGGTACTTCAGGGTCTTCCATTGTTTCCAAGAGTGAGAAAAGTGGCTTTCCATCGATGCAAGAGGTTGCAGTTGAAACTGGTGAAGAAAATGAAAAGGTGGTTTTCAATGCTGATTCTATATTGTTTGAGTTTATTGATGGATCTTGGAAGGAACGTGGAAAGGGGGAGCTGAAAGTTAACGTCCCTACAAGTGGGACTGGCAGAGCGAGGATTGTTATGAGGGCTAGAGGAAATTACAGGTTAATTTTGAATGCAAGTCTTTACCCTGACATGAAACTCACAAACATGGACAAGAAAGGCATCACCTTTGCCTGCATGAACAGCACCAGCGAAGGGAAGGACGGACTCTCAACATTTGGTGTGAAGTTCAAGGATGTATCCATAGTGGAGGAGTTTCGAGCAGCAGTCACTGAGCATAAAGACTCCTTTTCTGCTCATATCTTGGATGGAACATATCTTCAGACTGAAAATGCTCCTAAACCATGGGATTGGCAGAATCTCATAATTGTCCATTTAACTTTGCGATATGAACCAGCTTTTGTGCCCTCTAGATTGAGTACTTTCTTCACATATAGAAAGGCAAAAAGGAAAGAAATGGAAAATGCTACTTACTGTTGTTTGGATATTGGACCATCACGATATCTCAAGTCTACTGCCTATTGA

Coding sequence (CDS)

ATGGGGGATGCTGAAAATGCAACATCTACAAAAAAGAGGGCTGCTGGAAGGGAGCTATCACGAGATAACCCTGGGCTTGATGATGAAGAAGATGTTTCTGAGCAGGAGACTGGAACTTTCAAGCGGGCTAGTGAAGAGGTGCTAGCCACGAGAAGAATTGTCAAAGTACGTCGTGGTCCAACTGCCTCTGCCCCATCTTCAAATCCTTTTGCTGGAATACGCTTGGTACCTCCAACTGAAAATAGTGGAAGTGCTGCAGAAGTTAAAAGTGATACGCAGGCAGCTGGTGAGAAAGCAAGTTCAGATGAGGCAAATGGAAAGGATGTTTCCAATGAAGGGACTCAAAAAGATGGGGATCATAGTGATGAGCCAGCCGAATGTAAAATTGACACATCAGAGGTTGAATCTGTTCCAAATGTGCAGAATGTTGATCAGAATAGCACTGTTGTAAGCAAACTTGCCATATCTAAGGTAGATGATAACCTAGTTGCTGAAAGCAATAAGATTGAAAATGAAGAACCAGCGGGAGGAGATAAGACTGGCAATGAGGAACTTGTAAGAGTCGCTGAGAAGGAAGCTGAGAATGATGAATGTGTAAGTGTTGGTAAGAATGAGAATGAGGATCCTGCGAGAGGTGATAAGAATGAAAATGAGGATCCTGCAAGAGGTGATAAGAATGCAAATGAAGAGCCCAGTGAAGGAAATGAGATACAGAACAAGGAAACTGGGGAACAAGAAAAAACAGAAAATGAAGAAGACAAAGAAGACAAAAGTGAAGCAGAACCTAGTAAGGAGGCTGCTCCTTTGAACTCGTTCCAACAATTATCAAGCAGCCAGAATGCCTTCACAGGTCTTGCCGGTACTGGATTTTCGACATCTACGTTCTCGTTTGGTAATATACCCAAGGATGGGGTTGGCCTAACTACTAGTTTTGGTCTCTCTAATAATGGTAGCTCGGCCCTCTTTGGTACTTCAGGGTCTTCCATTGTTTCCAAGAGTGAGAAAAGTGGCTTTCCATCGATGCAAGAGGTTGCAGTTGAAACTGGTGAAGAAAATGAAAAGGTGGTTTTCAATGCTGATTCTATATTGTTTGAGTTTATTGATGGATCTTGGAAGGAACGTGGAAAGGGGGAGCTGAAAGTTAACGTCCCTACAAGTGGGACTGGCAGAGCGAGGATTGTTATGAGGGCTAGAGGAAATTACAGGTTAATTTTGAATGCAAGTCTTTACCCTGACATGAAACTCACAAACATGGACAAGAAAGGCATCACCTTTGCCTGCATGAACAGCACCAGCGAAGGGAAGGACGGACTCTCAACATTTGGTGTGAAGTTCAAGGATGTATCCATAGTGGAGGAGTTTCGAGCAGCAGTCACTGAGCATAAAGACTCCTTTTCTGCTCATATCTTGGATGGAACATATCTTCAGACTGAAAATGCTCCTAAACCATGGGATTGGCAGAATCTCATAATTGTCCATTTAACTTTGCGATATGAACCAGCTTTTGTGCCCTCTAGATTGAGTACTTTCTTCACATATAGAAAGGCAAAAAGGAAAGAAATGGAAAATGCTACTTACTGTTGTTTGGATATTGGACCATCACGATATCTCAAGTCTACTGCCTATTGA

Protein sequence

MGDAENATSTKKRAAGRELSRDNPGLDDEEDVSEQETGTFKRASEEVLATRRIVKVRRGPTASAPSSNPFAGIRLVPPTENSGSAAEVKSDTQAAGEKASSDEANGKDVSNEGTQKDGDHSDEPAECKIDTSEVESVPNVQNVDQNSTVVSKLAISKVDDNLVAESNKIENEEPAGGDKTGNEELVRVAEKEAENDECVSVGKNENEDPARGDKNENEDPARGDKNANEEPSEGNEIQNKETGEQEKTENEEDKEDKSEAEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNIPKDGVGLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEFIDGSWKERGKGELKVNVPTSGTGRARIVMRARGNYRLILNASLYPDMKLTNMDKKGITFACMNSTSEGKDGLSTFGVKFKDVSIVEEFRAAVTEHKDSFSAHILDGTYLQTENAPKPWDWQNLIIVHLTLRYEPAFVPSRLSTFFTYRKAKRKEMENATYCCLDIGPSRYLKSTAY

Homology

[Close]

BLAST of HG10023326 vs. NCBI nr
Match: XP_038898125.1 (nuclear pore complex protein NUP50A-like [Benincasa hispida])

HSP 1 Score: 803.9 bits (2075), Expect = 8.5e-229
Identity = 443/481 (92.10%), Postives = 455/481 (94.59%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDVSEQETGTFKRASEEVLATRRIVKVRRGP 60
           MGDAENATSTKKRAAGRELSRDNPGLDDEEDVSEQETGTFKRASEEVLATRRIVKVRRGP
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDVSEQETGTFKRASEEVLATRRIVKVRRGP 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSAAEVKSDTQAAGEKASSDEANGKDVSNEGTQKDGDH 120
           TASAPSSNPFAGIRLVPPTE+SGS AEVKSDTQ AGEKASSDEANGKDVSNE TQKDGDH
Sbjct: 61  TASAPSSNPFAGIRLVPPTESSGSTAEVKSDTQEAGEKASSDEANGKDVSNEATQKDGDH 120

Query: 121 SDEPAECKIDTSEVESVPNVQNVDQNSTVVSKLAISKVDDNLVAESNKIENEEPAGGDKT 180
           SDEPAECK DTSE ESVPNVQNVDQNSTVVS+ AISKVDDN VAESNKIENEEPAGGDKT
Sbjct: 121 SDEPAECKFDTSEAESVPNVQNVDQNSTVVSESAISKVDDNEVAESNKIENEEPAGGDKT 180

Query: 181 GNEELVRVAEKEAENDECVSVGKNENEDPARGDKNENEDPARGDKNANEEPSEGNEIQNK 240
           GNEE+VR AEKEAENDECVS GKNENEDPARGDKNENED ARGDKN NEEPS GNEI+NK
Sbjct: 181 GNEEVVRDAEKEAENDECVSGGKNENEDPARGDKNENEDLARGDKNENEEPSAGNEIENK 240

Query: 241 ETGEQEKTENEEDKEDKSEAEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 300
           ETGEQEKTENE +KE KSEAEPSKEAAPL+SFQQLSSSQNAFTGLAGTGFSTSTFSFGNI
Sbjct: 241 ETGEQEKTENEANKEGKSEAEPSKEAAPLSSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 300

Query: 301 PKDGVGLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNAD 360
           PKDG GLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNAD
Sbjct: 301 PKDGAGLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNAD 360

Query: 361 SILFEFIDGSWKERGKGELKVNVPTSGTGRARIVMRARGNYRLILNASLYPDMKLTNMDK 420
           SILFEFIDGSWKERGKGELKVNVPTSGTGRARI+MRARGNYRLILNASLYPDMKLTNMDK
Sbjct: 361 SILFEFIDGSWKERGKGELKVNVPTSGTGRARILMRARGNYRLILNASLYPDMKLTNMDK 420

Query: 421 KGITFACMNSTSEGKDGLSTFGVKFKDVSIVEEFRAAVTEHKDSFSAHILDGTYLQTENA 480
           +GITFACMNSTSEGKDGLSTFGVKFKDVSIVEEFRAAVTEHK   ++ +L       EN+
Sbjct: 421 RGITFACMNSTSEGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKAASTVLK----TPENS 477

Query: 481 P 482
           P
Sbjct: 481 P 477

[Close]

BLAST of HG10023326 vs. NCBI nr
Match: TYK04047.1 (nuclear pore complex protein NUP50A isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 751.1 bits (1938), Expect = 6.5e-213
Identity = 418/481 (86.90%), Postives = 437/481 (90.85%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDVSEQETGTFKRASEEVLATRRIVKVRRGP 60
           MGDAENATSTKKRAAGRELSRDNPG DD+EDVSEQETGTFKRASEEVLATRRIVKVRRG 
Sbjct: 29  MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 88

Query: 61  TASAPSSNPFAGIRLVPPTENSGSAAEVKSDTQAAGEKASSDEANGKDVSNEGTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGS AEV+ DT+AA EKA SDEANGKD+ +E TQKDGDH
Sbjct: 89  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 148

Query: 121 SDEPAECKIDTSEVESVPNVQNVDQNSTVVSKLAISKVDDNLVAESNKIENEEPAGGDKT 180
           SDEP +CKIDTSE +SVP VQ VDQNSTV+S+ AISKVDDNLV ESNKIENEEPAGGDKT
Sbjct: 149 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 208

Query: 181 GNEELVRVAEKEAENDECVSVGKNENEDPARGDKNENEDPARGDKNANEEPSEGNEIQNK 240
           GNEELVR AEKE+ENDECVS            DKNE+E PARGDKN NEEPSEGNEIQNK
Sbjct: 209 GNEELVRDAEKESENDECVSC-----------DKNEDEVPARGDKNENEEPSEGNEIQNK 268

Query: 241 ETGEQEKTENEEDKEDKSEAEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 300
           ETGEQEKTENEE+KEDKSE EPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI
Sbjct: 269 ETGEQEKTENEENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 328

Query: 301 PKDGVGLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNAD 360
           PKDGVGLTTSFGLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNAD
Sbjct: 329 PKDGVGLTTSFGLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNAD 388

Query: 361 SILFEFIDGSWKERGKGELKVNVPTSGTGRARIVMRARGNYRLILNASLYPDMKLTNMDK 420
           SILFEFIDGSWKERGKGELKVNVPTSGTGR RI+MRARGNYRLILNASLYPDMKLTNMDK
Sbjct: 389 SILFEFIDGSWKERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDK 448

Query: 421 KGITFACMNSTSEGKDGLSTFGVKFKDVSIVEEFRAAVTEHKDSFSAHILDGTYLQTENA 480
           +GITFACMNST +GKDGLSTFGVKFKDVSIVEEFRAAVTEHK   S+ +L       EN+
Sbjct: 449 RGITFACMNSTIDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLK----TPENS 494

Query: 481 P 482
           P
Sbjct: 509 P 494

[Close]

BLAST of HG10023326 vs. NCBI nr
Match: XP_008462135.1 (PREDICTED: nuclear pore complex protein NUP50A isoform X1 [Cucumis melo] >XP_008462136.1 PREDICTED: nuclear pore complex protein NUP50A isoform X1 [Cucumis melo] >XP_016902854.1 PREDICTED: nuclear pore complex protein NUP50A isoform X1 [Cucumis melo])

HSP 1 Score: 751.1 bits (1938), Expect = 6.5e-213
Identity = 418/481 (86.90%), Postives = 437/481 (90.85%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDVSEQETGTFKRASEEVLATRRIVKVRRGP 60
           MGDAENATSTKKRAAGRELSRDNPG DD+EDVSEQETGTFKRASEEVLATRRIVKVRRG 
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSAAEVKSDTQAAGEKASSDEANGKDVSNEGTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGS AEV+ DT+AA EKA SDEANGKD+ +E TQKDGDH
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120

Query: 121 SDEPAECKIDTSEVESVPNVQNVDQNSTVVSKLAISKVDDNLVAESNKIENEEPAGGDKT 180
           SDEP +CKIDTSE +SVP VQ VDQNSTV+S+ AISKVDDNLV ESNKIENEEPAGGDKT
Sbjct: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180

Query: 181 GNEELVRVAEKEAENDECVSVGKNENEDPARGDKNENEDPARGDKNANEEPSEGNEIQNK 240
           GNEELVR AEKE+ENDECVS            DKNE+E PARGDKN NEEPSEGNEIQNK
Sbjct: 181 GNEELVRDAEKESENDECVSC-----------DKNEDEVPARGDKNENEEPSEGNEIQNK 240

Query: 241 ETGEQEKTENEEDKEDKSEAEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 300
           ETGEQEKTENEE+KEDKSE EPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI
Sbjct: 241 ETGEQEKTENEENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 300

Query: 301 PKDGVGLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNAD 360
           PKDGVGLTTSFGLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNAD
Sbjct: 301 PKDGVGLTTSFGLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNAD 360

Query: 361 SILFEFIDGSWKERGKGELKVNVPTSGTGRARIVMRARGNYRLILNASLYPDMKLTNMDK 420
           SILFEFIDGSWKERGKGELKVNVPTSGTGR RI+MRARGNYRLILNASLYPDMKLTNMDK
Sbjct: 361 SILFEFIDGSWKERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDK 420

Query: 421 KGITFACMNSTSEGKDGLSTFGVKFKDVSIVEEFRAAVTEHKDSFSAHILDGTYLQTENA 480
           +GITFACMNST +GKDGLSTFGVKFKDVSIVEEFRAAVTEHK   S+ +L       EN+
Sbjct: 421 RGITFACMNSTIDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLK----TPENS 466

Query: 481 P 482
           P
Sbjct: 481 P 466

[Close]

BLAST of HG10023326 vs. NCBI nr
Match: XP_008462138.1 (PREDICTED: nuclear pore complex protein NUP50A isoform X2 [Cucumis melo])

HSP 1 Score: 747.3 bits (1928), Expect = 9.4e-212
Identity = 413/462 (89.39%), Postives = 429/462 (92.86%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDVSEQETGTFKRASEEVLATRRIVKVRRGP 60
           MGDAENATSTKKRAAGRELSRDNPG DD+EDVSEQETGTFKRASEEVLATRRIVKVRRG 
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSAAEVKSDTQAAGEKASSDEANGKDVSNEGTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGS AEV+ DT+AA EKA SDEANGKD+ +E TQKDGDH
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120

Query: 121 SDEPAECKIDTSEVESVPNVQNVDQNSTVVSKLAISKVDDNLVAESNKIENEEPAGGDKT 180
           SDEP +CKIDTSE +SVP VQ VDQNSTV+S+ AISKVDDNLV ESNKIENEEPAGGDKT
Sbjct: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180

Query: 181 GNEELVRVAEKEAENDECVSVGKNENEDPARGDKNENEDPARGDKNANEEPSEGNEIQNK 240
           GNEELVR AEKE+ENDECVS            DKNE+E PARGDKN NEEPSEGNEIQNK
Sbjct: 181 GNEELVRDAEKESENDECVSC-----------DKNEDEVPARGDKNENEEPSEGNEIQNK 240

Query: 241 ETGEQEKTENEEDKEDKSEAEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 300
           ETGEQEKTENEE+KEDKSE EPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI
Sbjct: 241 ETGEQEKTENEENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 300

Query: 301 PKDGVGLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNAD 360
           PKDGVGLTTSFGLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNAD
Sbjct: 301 PKDGVGLTTSFGLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNAD 360

Query: 361 SILFEFIDGSWKERGKGELKVNVPTSGTGRARIVMRARGNYRLILNASLYPDMKLTNMDK 420
           SILFEFIDGSWKERGKGELKVNVPTSGTGR RI+MRARGNYRLILNASLYPDMKLTNMDK
Sbjct: 361 SILFEFIDGSWKERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDK 420

Query: 421 KGITFACMNSTSEGKDGLSTFGVKFKDVSIVEEFRAAVTEHK 463
           +GITFACMNST +GKDGLSTFGVKFKDVSIVEEFRAAVTEHK
Sbjct: 421 RGITFACMNSTIDGKDGLSTFGVKFKDVSIVEEFRAAVTEHK 451

[Close]

BLAST of HG10023326 vs. NCBI nr
Match: KAA0059280.1 (nuclear pore complex protein NUP50A isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 747.3 bits (1928), Expect = 9.4e-212
Identity = 413/462 (89.39%), Postives = 429/462 (92.86%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDVSEQETGTFKRASEEVLATRRIVKVRRGP 60
           MGDAENATSTKKRAAGRELSRDNPG DD+EDVSEQETGTFKRASEEVLATRRIVKVRRG 
Sbjct: 29  MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 88

Query: 61  TASAPSSNPFAGIRLVPPTENSGSAAEVKSDTQAAGEKASSDEANGKDVSNEGTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGS AEV+ DT+AA EKA SDEANGKD+ +E TQKDGDH
Sbjct: 89  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 148

Query: 121 SDEPAECKIDTSEVESVPNVQNVDQNSTVVSKLAISKVDDNLVAESNKIENEEPAGGDKT 180
           SDEP +CKIDTSE +SVP VQ VDQNSTV+S+ AISKVDDNLV ESNKIENEEPAGGDKT
Sbjct: 149 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 208

Query: 181 GNEELVRVAEKEAENDECVSVGKNENEDPARGDKNENEDPARGDKNANEEPSEGNEIQNK 240
           GNEELVR AEKE+ENDECVS            DKNE+E PARGDKN NEEPSEGNEIQNK
Sbjct: 209 GNEELVRDAEKESENDECVSC-----------DKNEDEVPARGDKNENEEPSEGNEIQNK 268

Query: 241 ETGEQEKTENEEDKEDKSEAEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 300
           ETGEQEKTENEE+KEDKSE EPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI
Sbjct: 269 ETGEQEKTENEENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 328

Query: 301 PKDGVGLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNAD 360
           PKDGVGLTTSFGLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNAD
Sbjct: 329 PKDGVGLTTSFGLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNAD 388

Query: 361 SILFEFIDGSWKERGKGELKVNVPTSGTGRARIVMRARGNYRLILNASLYPDMKLTNMDK 420
           SILFEFIDGSWKERGKGELKVNVPTSGTGR RI+MRARGNYRLILNASLYPDMKLTNMDK
Sbjct: 389 SILFEFIDGSWKERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDK 448

Query: 421 KGITFACMNSTSEGKDGLSTFGVKFKDVSIVEEFRAAVTEHK 463
           +GITFACMNST +GKDGLSTFGVKFKDVSIVEEFRAAVTEHK
Sbjct: 449 RGITFACMNSTIDGKDGLSTFGVKFKDVSIVEEFRAAVTEHK 479

[Close]

BLAST of HG10023326 vs. ExPASy Swiss-Prot
Match: Q9C829 (Nuclear pore complex protein NUP50A OS=Arabidopsis thaliana OX=3702 GN=NUP50A PE=1 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.0e-84
Identity = 215/470 (45.74%), Postives = 289/470 (61.49%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPGLDDEEDVSEQETGTFKRASEEVLATRRIVKVRRG 60
           MGD+EN    +KKR A ++LSRDNPGLDD++D +E E+GTFK+AS+EVLA+RRIV+V+R 
Sbjct: 1   MGDSENVQQPSKKRGALKQLSRDNPGLDDDDDSAELESGTFKKASDEVLASRRIVRVKRK 60

Query: 61  PTASAP--SSNPFAGIRLVPPTENSGSAAEVKSDTQAAGEKASSDEANGKDVSNEGTQKD 120
             ++AP  +SNPFAGI+LVP T  + ++  V ++   A  K +  EA  +D       ++
Sbjct: 61  EPSAAPVAASNPFAGIQLVPTT--APASTPVGTNAPLAESKLAPAEAVVEDNQKASDIEE 120

Query: 121 GDHSDEPAECKIDTSEVESVPNVQNVDQNSTVVSKLAISKVDDNLVAESNKIENEEPAGG 180
           GD  D     K+D  +       +  D+             DDN   +S  ++       
Sbjct: 121 GDEVDSK---KVDVKDAVGEETEKTKDK-------------DDNHCGKSADVQ------- 180

Query: 181 DKTGNEELVRVAEKEAENDECVSVGKNENEDPARGDKNENEDPARGDKNANEEPSEGNEI 240
                 E+ ++   +         G ++ + P   D         G   A ++  EGN I
Sbjct: 181 --VAATEVAQMVSCDTNVCNNAVEGTDQTDFPLEKDS--------GGDQAEKKEKEGNGI 240

Query: 241 QNKETGEQEKTENEEDKEDKSEAEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSF 300
           +                    EA+ + +    +SFQQ SS++NAFTGLA T  S S+FSF
Sbjct: 241 E--------------------EADKNGDNGAFSSFQQHSSNKNAFTGLASTEASGSSFSF 300

Query: 301 GNIPKD---GVGLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEK 360
           G + +D   G G    FGL ++ SS++FG +GSSI+ KSE SGFP  QEV+ ETGEENEK
Sbjct: 301 GLVSQDGSTGTGSLFGFGLPSSNSSSIFGATGSSIIKKSEGSGFPPKQEVSTETGEENEK 360

Query: 361 VVFNADSILFEFIDGSWKERGKGELKVNVPTSGTGRARIVMRARGNYRLILNASLYPDMK 420
           V F+ADSI+FE++DG WKERGKGELKVNV +S  G+AR+VMRA+GNYRLILNASLYP+MK
Sbjct: 361 VAFSADSIMFEYLDGGWKERGKGELKVNV-SSNDGKARLVMRAKGNYRLILNASLYPEMK 414

Query: 421 LTNMDKKGITFACMNSTSEGKDGLSTFGVKFKDVSIVEEFRAAVTEHKDS 465
           L NMDKKGITFAC+NS SEGK+GLSTF +KFKD +IVEEFR A+ +HKDS
Sbjct: 421 LANMDKKGITFACVNSVSEGKEGLSTFALKFKDPTIVEEFRVAIDKHKDS 414

[Close]

BLAST of HG10023326 vs. ExPASy Swiss-Prot
Match: Q9LW88 (Nuclear pore complex protein NUP50B OS=Arabidopsis thaliana OX=3702 GN=NUP50B PE=1 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 8.9e-80
Identity = 213/501 (42.51%), Postives = 300/501 (59.88%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPGL-DDEEDVSEQETGTFKRASEEVLATRRIVKVRR 60
           MGD++NA   ++KR A +ELSRDNPGL DD+ED S  E+GTF  AS+EVLA+RRI++VRR
Sbjct: 1   MGDSDNAIPFSRKRTALKELSRDNPGLDDDDEDTSALESGTFNTASKEVLASRRIIRVRR 60

Query: 61  GPTASA--PSSNPFAGIRLVPPTENSGSAAEVKSDTQAAGEKASSDEANGKDVSNEGTQK 120
              ++   P+SNPF GIRLVP T  + S A  ++    +  K  +      D + E    
Sbjct: 61  TDRSATAPPASNPFTGIRLVPFTAPAPSTAAAETTKPLSAGKQETLADGRSDATKE---T 120

Query: 121 DGDHSDEPAECKIDTSEVESVPNVQNVDQNSTVVSKLAISKVDDNLVAESNKIENEEPAG 180
           DGD  ++       +  +++V   +      +  +K  I   +  +    N +E     G
Sbjct: 121 DGDSKEK-------SDAIDAVGKQETQGDEISAKTKDIIDGGEKEMSEAVNSVE----GG 180

Query: 181 GDKTGNEELVR--VAEKEAENDECVSVGKNENEDPARGDKNENEDPARGDKNANEEPSEG 240
           G    NE+ ++  +  + A  +E V                        D N N    EG
Sbjct: 181 GAVNKNEDEIKTTMVTEVAAGEETVK-----------------------DDNNNSNTVEG 240

Query: 241 NEIQNKETGEQEKTENEEDKEDKSEAEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTST 300
           ++   K+TG  +  +  ++ +   + E + ++  L+SF Q SSS+NAFTGLA TGFS S+
Sbjct: 241 SDCVVKDTGGNQTEKEGKEGDGNEDTEKNGDSGALSSFHQHSSSKNAFTGLASTGFSASS 300

Query: 301 FSFGNIPKDG------VGLTTSFGLSNNGSSALFGTS-GSSIVSKSEK--SGFPSMQEVA 360
           FSFG +P++G         + SFG +NNG+S+LFG S  +SI +KS +  + FPS Q+V+
Sbjct: 301 FSFGLVPQEGSTGSGSEQSSFSFGQANNGNSSLFGASVATSITTKSTETTTAFPSKQDVS 360

Query: 361 VETGEENEKVVFNADSILFEFIDGSWKERGKGELKVNVPTSGTGRARIVMRARGNYRLIL 420
           VETGEENEK  F ADS++FE+++G WKERGKGELKVN+ T+   +AR+VMR++GNYRL L
Sbjct: 361 VETGEENEKAAFTADSVMFEYLEGGWKERGKGELKVNISTTENRKARLVMRSKGNYRLTL 420

Query: 421 NASLYPDMKLTNMDKKGITFACMNSTSEGKDGLSTFGVKFKDVSIVEEFRAAVTEHKDSF 480
           NASLYP+MKL  MDKKGITFAC+NS S+ KDGLST  +KFKD ++VEEFRA + EHKDS 
Sbjct: 421 NASLYPEMKLAKMDKKGITFACVNSVSDAKDGLSTLALKFKDPTVVEEFRAVIEEHKDSK 464

Query: 481 SAHILDGTYLQT-ENAPKPWD 486
            +       L+T EN+P   D
Sbjct: 481 PSVAEAAAPLKTPENSPSAED 464

[Close]

BLAST of HG10023326 vs. ExPASy Swiss-Prot
Match: A0A0B4K7J2 (E3 SUMO-protein ligase RanBP2 OS=Drosophila melanogaster OX=7227 GN=Nup358 PE=1 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.0e-11
Identity = 43/130 (33.08%), Postives = 72/130 (55.38%), Query Frame = 0


Query: 339  PSMQEVAVETGEENEKVVFNADSILFEFIDGSWKERGKGELKVNVPTSGTGRARIVMRAR 398
            P   EV V TGEE E + F + + LF ++D  WKERG G +K+ +    TG +R++MR  
Sbjct: 1315 PLPDEVEVRTGEEGEDIKFTSRAKLFRYVDKEWKERGTGVIKI-LCDKATGVSRVLMRRD 1374

Query: 399  GNYRLILNASLYPDMKLT----NMDKKGITFACMNSTSEGKDGLSTFGVKFKDVSIVEEF 458
              +++  N ++  D+ +     + DKK + +A  N  ++ +  L  F V+FK   + EEF
Sbjct: 1375 QTHKVCANHTITADITINVANQDKDKKSLLWAA-NDFADEQVTLERFLVRFKTGELAEEF 1434

Query: 459  RAAVTEHKDS 465
            R A T+  ++
Sbjct: 1435 RVAFTKASEA 1442

[Close]

BLAST of HG10023326 vs. ExPASy Swiss-Prot
Match: Q86VV4 (Ran-binding protein 3-like OS=Homo sapiens OX=9606 GN=RANBP3L PE=1 SV=2)

HSP 1 Score: 55.8 bits (133), Expect = 1.7e-06
Identity = 45/132 (34.09%), Postives = 70/132 (53.03%), Query Frame = 0


Query: 297 FGNIPKDGVGLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVV 356
           F +IPK  V   +S   S   +S +     S+    S+ S    ++++ V TGEE E  V
Sbjct: 244 FKSIPKFPVNFLSSRTDSIKNTSLI----ESAAAFSSQPSRKCLLEKIDVITGEETEHNV 303

Query: 357 FNADSILFEF--IDGSWKERGKGELKVNVPTS---GTGRARIVMRARGNYRLILNASLYP 416
              +  LF F     SW ERG+G L++N   S   GT ++R++MR +G+ RLILN+ L+ 
Sbjct: 304 LKINCKLFIFNKTTQSWIERGRGTLRLNDTASTDCGTLQSRLIMRNQGSLRLILNSKLWA 363

Query: 417 DMKLTNMDKKGI 424
            MK+   + K +
Sbjct: 364 QMKIQRANHKNV 371

[Close]

BLAST of HG10023326 vs. ExPASy Swiss-Prot
Match: Q6PDH4 (Ran-binding protein 3-like OS=Mus musculus OX=10090 GN=Ranbp3l PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 3.8e-06
Identity = 41/134 (30.60%), Postives = 69/134 (51.49%), Query Frame = 0


Query: 313 LSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNADSILFEF--IDGS 372
           +SN+ S        S+    S+ S    ++++ V TGEE E  V   +  +F F     S
Sbjct: 281 VSNSDSIENISLVESAAAFSSKPSQKCLLEKIDVITGEETEHNVLKINCKIFVFNKATES 340

Query: 373 WKERGKGELKVNVPTS---GTGRARIVMRARGNYRLILNASLYPDMKLTNMDKKGITFAC 432
           W ERG+G L++N       GT ++R++MR +G+ RL+LN+ L+  MK+    +K +    
Sbjct: 341 WSERGQGILRLNDTAGRECGTLQSRLIMRNQGSLRLVLNSRLWAQMKIQRASQKNLR--- 400

Query: 433 MNSTSEGKDGLSTF 442
           + +T    DG+  F
Sbjct: 401 ITATDLEDDGIKIF 411

[Close]

BLAST of HG10023326 vs. ExPASy TrEMBL
Match: A0A1S4E3Q0 (nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500566 PE=4 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 3.2e-213
Identity = 418/481 (86.90%), Postives = 437/481 (90.85%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDVSEQETGTFKRASEEVLATRRIVKVRRGP 60
           MGDAENATSTKKRAAGRELSRDNPG DD+EDVSEQETGTFKRASEEVLATRRIVKVRRG 
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSAAEVKSDTQAAGEKASSDEANGKDVSNEGTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGS AEV+ DT+AA EKA SDEANGKD+ +E TQKDGDH
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120

Query: 121 SDEPAECKIDTSEVESVPNVQNVDQNSTVVSKLAISKVDDNLVAESNKIENEEPAGGDKT 180
           SDEP +CKIDTSE +SVP VQ VDQNSTV+S+ AISKVDDNLV ESNKIENEEPAGGDKT
Sbjct: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180

Query: 181 GNEELVRVAEKEAENDECVSVGKNENEDPARGDKNENEDPARGDKNANEEPSEGNEIQNK 240
           GNEELVR AEKE+ENDECVS            DKNE+E PARGDKN NEEPSEGNEIQNK
Sbjct: 181 GNEELVRDAEKESENDECVSC-----------DKNEDEVPARGDKNENEEPSEGNEIQNK 240

Query: 241 ETGEQEKTENEEDKEDKSEAEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 300
           ETGEQEKTENEE+KEDKSE EPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI
Sbjct: 241 ETGEQEKTENEENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 300

Query: 301 PKDGVGLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNAD 360
           PKDGVGLTTSFGLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNAD
Sbjct: 301 PKDGVGLTTSFGLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNAD 360

Query: 361 SILFEFIDGSWKERGKGELKVNVPTSGTGRARIVMRARGNYRLILNASLYPDMKLTNMDK 420
           SILFEFIDGSWKERGKGELKVNVPTSGTGR RI+MRARGNYRLILNASLYPDMKLTNMDK
Sbjct: 361 SILFEFIDGSWKERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDK 420

Query: 421 KGITFACMNSTSEGKDGLSTFGVKFKDVSIVEEFRAAVTEHKDSFSAHILDGTYLQTENA 480
           +GITFACMNST +GKDGLSTFGVKFKDVSIVEEFRAAVTEHK   S+ +L       EN+
Sbjct: 421 RGITFACMNSTIDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLK----TPENS 466

Query: 481 P 482
           P
Sbjct: 481 P 466

[Close]

BLAST of HG10023326 vs. ExPASy TrEMBL
Match: A0A5D3BX12 (Nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold347G002470 PE=4 SV=1)

HSP 1 Score: 751.1 bits (1938), Expect = 3.2e-213
Identity = 418/481 (86.90%), Postives = 437/481 (90.85%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDVSEQETGTFKRASEEVLATRRIVKVRRGP 60
           MGDAENATSTKKRAAGRELSRDNPG DD+EDVSEQETGTFKRASEEVLATRRIVKVRRG 
Sbjct: 29  MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 88

Query: 61  TASAPSSNPFAGIRLVPPTENSGSAAEVKSDTQAAGEKASSDEANGKDVSNEGTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGS AEV+ DT+AA EKA SDEANGKD+ +E TQKDGDH
Sbjct: 89  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 148

Query: 121 SDEPAECKIDTSEVESVPNVQNVDQNSTVVSKLAISKVDDNLVAESNKIENEEPAGGDKT 180
           SDEP +CKIDTSE +SVP VQ VDQNSTV+S+ AISKVDDNLV ESNKIENEEPAGGDKT
Sbjct: 149 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 208

Query: 181 GNEELVRVAEKEAENDECVSVGKNENEDPARGDKNENEDPARGDKNANEEPSEGNEIQNK 240
           GNEELVR AEKE+ENDECVS            DKNE+E PARGDKN NEEPSEGNEIQNK
Sbjct: 209 GNEELVRDAEKESENDECVSC-----------DKNEDEVPARGDKNENEEPSEGNEIQNK 268

Query: 241 ETGEQEKTENEEDKEDKSEAEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 300
           ETGEQEKTENEE+KEDKSE EPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI
Sbjct: 269 ETGEQEKTENEENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 328

Query: 301 PKDGVGLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNAD 360
           PKDGVGLTTSFGLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNAD
Sbjct: 329 PKDGVGLTTSFGLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNAD 388

Query: 361 SILFEFIDGSWKERGKGELKVNVPTSGTGRARIVMRARGNYRLILNASLYPDMKLTNMDK 420
           SILFEFIDGSWKERGKGELKVNVPTSGTGR RI+MRARGNYRLILNASLYPDMKLTNMDK
Sbjct: 389 SILFEFIDGSWKERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDK 448

Query: 421 KGITFACMNSTSEGKDGLSTFGVKFKDVSIVEEFRAAVTEHKDSFSAHILDGTYLQTENA 480
           +GITFACMNST +GKDGLSTFGVKFKDVSIVEEFRAAVTEHK   S+ +L       EN+
Sbjct: 449 RGITFACMNSTIDGKDGLSTFGVKFKDVSIVEEFRAAVTEHKGKASSTVLK----TPENS 494

Query: 481 P 482
           P
Sbjct: 509 P 494

[Close]

BLAST of HG10023326 vs. ExPASy TrEMBL
Match: A0A5A7UW04 (Nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold242G00030 PE=4 SV=1)

HSP 1 Score: 747.3 bits (1928), Expect = 4.6e-212
Identity = 413/462 (89.39%), Postives = 429/462 (92.86%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDVSEQETGTFKRASEEVLATRRIVKVRRGP 60
           MGDAENATSTKKRAAGRELSRDNPG DD+EDVSEQETGTFKRASEEVLATRRIVKVRRG 
Sbjct: 29  MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 88

Query: 61  TASAPSSNPFAGIRLVPPTENSGSAAEVKSDTQAAGEKASSDEANGKDVSNEGTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGS AEV+ DT+AA EKA SDEANGKD+ +E TQKDGDH
Sbjct: 89  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 148

Query: 121 SDEPAECKIDTSEVESVPNVQNVDQNSTVVSKLAISKVDDNLVAESNKIENEEPAGGDKT 180
           SDEP +CKIDTSE +SVP VQ VDQNSTV+S+ AISKVDDNLV ESNKIENEEPAGGDKT
Sbjct: 149 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 208

Query: 181 GNEELVRVAEKEAENDECVSVGKNENEDPARGDKNENEDPARGDKNANEEPSEGNEIQNK 240
           GNEELVR AEKE+ENDECVS            DKNE+E PARGDKN NEEPSEGNEIQNK
Sbjct: 209 GNEELVRDAEKESENDECVSC-----------DKNEDEVPARGDKNENEEPSEGNEIQNK 268

Query: 241 ETGEQEKTENEEDKEDKSEAEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 300
           ETGEQEKTENEE+KEDKSE EPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI
Sbjct: 269 ETGEQEKTENEENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 328

Query: 301 PKDGVGLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNAD 360
           PKDGVGLTTSFGLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNAD
Sbjct: 329 PKDGVGLTTSFGLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNAD 388

Query: 361 SILFEFIDGSWKERGKGELKVNVPTSGTGRARIVMRARGNYRLILNASLYPDMKLTNMDK 420
           SILFEFIDGSWKERGKGELKVNVPTSGTGR RI+MRARGNYRLILNASLYPDMKLTNMDK
Sbjct: 389 SILFEFIDGSWKERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDK 448

Query: 421 KGITFACMNSTSEGKDGLSTFGVKFKDVSIVEEFRAAVTEHK 463
           +GITFACMNST +GKDGLSTFGVKFKDVSIVEEFRAAVTEHK
Sbjct: 449 RGITFACMNSTIDGKDGLSTFGVKFKDVSIVEEFRAAVTEHK 479

[Close]

BLAST of HG10023326 vs. ExPASy TrEMBL
Match: A0A1S3CHQ9 (nuclear pore complex protein NUP50A isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500566 PE=4 SV=1)

HSP 1 Score: 747.3 bits (1928), Expect = 4.6e-212
Identity = 413/462 (89.39%), Postives = 429/462 (92.86%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDVSEQETGTFKRASEEVLATRRIVKVRRGP 60
           MGDAENATSTKKRAAGRELSRDNPG DD+EDVSEQETGTFKRASEEVLATRRIVKVRRG 
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGPDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSAAEVKSDTQAAGEKASSDEANGKDVSNEGTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGS AEV+ DT+AA EKA SDEANGKD+ +E TQKDGDH
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVQHDTEAADEKAGSDEANGKDIPHEVTQKDGDH 120

Query: 121 SDEPAECKIDTSEVESVPNVQNVDQNSTVVSKLAISKVDDNLVAESNKIENEEPAGGDKT 180
           SDEP +CKIDTSE +SVP VQ VDQNSTV+S+ AISKVDDNLV ESNKIENEEPAGGDKT
Sbjct: 121 SDEPVKCKIDTSEAKSVPKVQPVDQNSTVLSESAISKVDDNLVFESNKIENEEPAGGDKT 180

Query: 181 GNEELVRVAEKEAENDECVSVGKNENEDPARGDKNENEDPARGDKNANEEPSEGNEIQNK 240
           GNEELVR AEKE+ENDECVS            DKNE+E PARGDKN NEEPSEGNEIQNK
Sbjct: 181 GNEELVRDAEKESENDECVSC-----------DKNEDEVPARGDKNENEEPSEGNEIQNK 240

Query: 241 ETGEQEKTENEEDKEDKSEAEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 300
           ETGEQEKTENEE+KEDKSE EPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI
Sbjct: 241 ETGEQEKTENEENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 300

Query: 301 PKDGVGLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNAD 360
           PKDGVGLTTSFGLSNNGSSALFGTSGSS VSKSE+SGFPSMQEVAVETGEENEKVVFNAD
Sbjct: 301 PKDGVGLTTSFGLSNNGSSALFGTSGSSTVSKSERSGFPSMQEVAVETGEENEKVVFNAD 360

Query: 361 SILFEFIDGSWKERGKGELKVNVPTSGTGRARIVMRARGNYRLILNASLYPDMKLTNMDK 420
           SILFEFIDGSWKERGKGELKVNVPTSGTGR RI+MRARGNYRLILNASLYPDMKLTNMDK
Sbjct: 361 SILFEFIDGSWKERGKGELKVNVPTSGTGRGRILMRARGNYRLILNASLYPDMKLTNMDK 420

Query: 421 KGITFACMNSTSEGKDGLSTFGVKFKDVSIVEEFRAAVTEHK 463
           +GITFACMNST +GKDGLSTFGVKFKDVSIVEEFRAAVTEHK
Sbjct: 421 RGITFACMNSTIDGKDGLSTFGVKFKDVSIVEEFRAAVTEHK 451

[Close]

BLAST of HG10023326 vs. ExPASy TrEMBL
Match: A0A0A0KAD0 (RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G446650 PE=4 SV=1)

HSP 1 Score: 738.0 bits (1904), Expect = 2.8e-209
Identity = 411/481 (85.45%), Postives = 434/481 (90.23%), Query Frame = 0


Query: 1   MGDAENATSTKKRAAGRELSRDNPGLDDEEDVSEQETGTFKRASEEVLATRRIVKVRRGP 60
           MGDAENATSTKKRAAGRELSRDNPGLDD+EDVSEQETGTFKRASEEVLATRRIVKVRRG 
Sbjct: 1   MGDAENATSTKKRAAGRELSRDNPGLDDDEDVSEQETGTFKRASEEVLATRRIVKVRRGS 60

Query: 61  TASAPSSNPFAGIRLVPPTENSGSAAEVKSDTQAAGEKASSDEANGKDVSNEGTQKDGDH 120
           TASAPSSNPFAGIRLVPPTENSGS AEV+ DT+AAGEKA SDEANGKD+ +E TQKDGDH
Sbjct: 61  TASAPSSNPFAGIRLVPPTENSGSVAEVRRDTEAAGEKAGSDEANGKDIPHEMTQKDGDH 120

Query: 121 SDEPAECKIDTSEVESVPNVQNVDQNSTVVSKLAISKVDDNLVAESNKIENEEPAGGDKT 180
           SD+P + KIDTSE +SVP VQ VDQNSTV S+ AISKVDDNLV+ESNKIENEEP GGDKT
Sbjct: 121 SDDPVQSKIDTSEAKSVPKVQPVDQNSTVSSESAISKVDDNLVSESNKIENEEPVGGDKT 180

Query: 181 GNEELVRVAEKEAENDECVSVGKNENEDPARGDKNENEDPARGDKNANEEPSEGNEIQNK 240
           GNEELVR AEKE+ENDEC S           G+KNE+ DP RGDKN +EEPSEGNEIQNK
Sbjct: 181 GNEELVRDAEKESENDECAS-----------GNKNEDADPERGDKNESEEPSEGNEIQNK 240

Query: 241 ETGEQEKTENEEDKEDKSEAEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 300
           ETGE EKTE+EE+KEDKSE EPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI
Sbjct: 241 ETGELEKTESEENKEDKSEGEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSFGNI 300

Query: 301 PKDGVGLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNAD 360
           PKDGVGLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNAD
Sbjct: 301 PKDGVGLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEKVVFNAD 360

Query: 361 SILFEFIDGSWKERGKGELKVNVPTSGTGRARIVMRARGNYRLILNASLYPDMKLTNMDK 420
           SILFEFIDGSWKERGKGELKVNVPTSG GR RI+MRARGNYRLILNASLYPDMKLTNMDK
Sbjct: 361 SILFEFIDGSWKERGKGELKVNVPTSGIGRGRILMRARGNYRLILNASLYPDMKLTNMDK 420

Query: 421 KGITFACMNSTSEGKDGLSTFGVKFKDVSIVEEFRAAVTEHKDSFSAHILDGTYLQTENA 480
           +GITFACMNST++GK GLST GVKFKDVSIVEEFRAAVTEHK   S+ +L       EN+
Sbjct: 421 RGITFACMNSTNDGKVGLSTLGVKFKDVSIVEEFRAAVTEHKGKASSTVLK----TPENS 466

Query: 481 P 482
           P
Sbjct: 481 P 466

[Close]

BLAST of HG10023326 vs. TAIR 10
Match: AT1G52380.1 (NUP50 (Nucleoporin 50 kDa) protein )

HSP 1 Score: 314.7 bits (805), Expect = 1.5e-85
Identity = 215/470 (45.74%), Postives = 289/470 (61.49%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPGLDDEEDVSEQETGTFKRASEEVLATRRIVKVRRG 60
           MGD+EN    +KKR A ++LSRDNPGLDD++D +E E+GTFK+AS+EVLA+RRIV+V+R 
Sbjct: 1   MGDSENVQQPSKKRGALKQLSRDNPGLDDDDDSAELESGTFKKASDEVLASRRIVRVKRK 60

Query: 61  PTASAP--SSNPFAGIRLVPPTENSGSAAEVKSDTQAAGEKASSDEANGKDVSNEGTQKD 120
             ++AP  +SNPFAGI+LVP T  + ++  V ++   A  K +  EA  +D       ++
Sbjct: 61  EPSAAPVAASNPFAGIQLVPTT--APASTPVGTNAPLAESKLAPAEAVVEDNQKASDIEE 120

Query: 121 GDHSDEPAECKIDTSEVESVPNVQNVDQNSTVVSKLAISKVDDNLVAESNKIENEEPAGG 180
           GD  D     K+D  +       +  D+             DDN   +S  ++       
Sbjct: 121 GDEVDSK---KVDVKDAVGEETEKTKDK-------------DDNHCGKSADVQ------- 180

Query: 181 DKTGNEELVRVAEKEAENDECVSVGKNENEDPARGDKNENEDPARGDKNANEEPSEGNEI 240
                 E+ ++   +         G ++ + P   D         G   A ++  EGN I
Sbjct: 181 --VAATEVAQMVSCDTNVCNNAVEGTDQTDFPLEKDS--------GGDQAEKKEKEGNGI 240

Query: 241 QNKETGEQEKTENEEDKEDKSEAEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTSTFSF 300
           +                    EA+ + +    +SFQQ SS++NAFTGLA T  S S+FSF
Sbjct: 241 E--------------------EADKNGDNGAFSSFQQHSSNKNAFTGLASTEASGSSFSF 300

Query: 301 GNIPKD---GVGLTTSFGLSNNGSSALFGTSGSSIVSKSEKSGFPSMQEVAVETGEENEK 360
           G + +D   G G    FGL ++ SS++FG +GSSI+ KSE SGFP  QEV+ ETGEENEK
Sbjct: 301 GLVSQDGSTGTGSLFGFGLPSSNSSSIFGATGSSIIKKSEGSGFPPKQEVSTETGEENEK 360

Query: 361 VVFNADSILFEFIDGSWKERGKGELKVNVPTSGTGRARIVMRARGNYRLILNASLYPDMK 420
           V F+ADSI+FE++DG WKERGKGELKVNV +S  G+AR+VMRA+GNYRLILNASLYP+MK
Sbjct: 361 VAFSADSIMFEYLDGGWKERGKGELKVNV-SSNDGKARLVMRAKGNYRLILNASLYPEMK 414

Query: 421 LTNMDKKGITFACMNSTSEGKDGLSTFGVKFKDVSIVEEFRAAVTEHKDS 465
           L NMDKKGITFAC+NS SEGK+GLSTF +KFKD +IVEEFR A+ +HKDS
Sbjct: 421 LANMDKKGITFACVNSVSEGKEGLSTFALKFKDPTIVEEFRVAIDKHKDS 414

[Close]

BLAST of HG10023326 vs. TAIR 10
Match: AT3G15970.1 (NUP50 (Nucleoporin 50 kDa) protein )

HSP 1 Score: 299.3 bits (765), Expect = 6.3e-81
Identity = 213/501 (42.51%), Postives = 300/501 (59.88%), Query Frame = 0


Query: 1   MGDAENATS-TKKRAAGRELSRDNPGL-DDEEDVSEQETGTFKRASEEVLATRRIVKVRR 60
           MGD++NA   ++KR A +ELSRDNPGL DD+ED S  E+GTF  AS+EVLA+RRI++VRR
Sbjct: 1   MGDSDNAIPFSRKRTALKELSRDNPGLDDDDEDTSALESGTFNTASKEVLASRRIIRVRR 60

Query: 61  GPTASA--PSSNPFAGIRLVPPTENSGSAAEVKSDTQAAGEKASSDEANGKDVSNEGTQK 120
              ++   P+SNPF GIRLVP T  + S A  ++    +  K  +      D + E    
Sbjct: 61  TDRSATAPPASNPFTGIRLVPFTAPAPSTAAAETTKPLSAGKQETLADGRSDATKE---T 120

Query: 121 DGDHSDEPAECKIDTSEVESVPNVQNVDQNSTVVSKLAISKVDDNLVAESNKIENEEPAG 180
           DGD  ++       +  +++V   +      +  +K  I   +  +    N +E     G
Sbjct: 121 DGDSKEK-------SDAIDAVGKQETQGDEISAKTKDIIDGGEKEMSEAVNSVE----GG 180

Query: 181 GDKTGNEELVR--VAEKEAENDECVSVGKNENEDPARGDKNENEDPARGDKNANEEPSEG 240
           G    NE+ ++  +  + A  +E V                        D N N    EG
Sbjct: 181 GAVNKNEDEIKTTMVTEVAAGEETVK-----------------------DDNNNSNTVEG 240

Query: 241 NEIQNKETGEQEKTENEEDKEDKSEAEPSKEAAPLNSFQQLSSSQNAFTGLAGTGFSTST 300
           ++   K+TG  +  +  ++ +   + E + ++  L+SF Q SSS+NAFTGLA TGFS S+
Sbjct: 241 SDCVVKDTGGNQTEKEGKEGDGNEDTEKNGDSGALSSFHQHSSSKNAFTGLASTGFSASS 300

Query: 301 FSFGNIPKDG------VGLTTSFGLSNNGSSALFGTS-GSSIVSKSEK--SGFPSMQEVA 360
           FSFG +P++G         + SFG +NNG+S+LFG S  +SI +KS +  + FPS Q+V+
Sbjct: 301 FSFGLVPQEGSTGSGSEQSSFSFGQANNGNSSLFGASVATSITTKSTETTTAFPSKQDVS 360

Query: 361 VETGEENEKVVFNADSILFEFIDGSWKERGKGELKVNVPTSGTGRARIVMRARGNYRLIL 420
           VETGEENEK  F ADS++FE+++G WKERGKGELKVN+ T+   +AR+VMR++GNYRL L
Sbjct: 361 VETGEENEKAAFTADSVMFEYLEGGWKERGKGELKVNISTTENRKARLVMRSKGNYRLTL 420

Query: 421 NASLYPDMKLTNMDKKGITFACMNSTSEGKDGLSTFGVKFKDVSIVEEFRAAVTEHKDSF 480
           NASLYP+MKL  MDKKGITFAC+NS S+ KDGLST  +KFKD ++VEEFRA + EHKDS 
Sbjct: 421 NASLYPEMKLAKMDKKGITFACVNSVSDAKDGLSTLALKFKDPTVVEEFRAVIEEHKDSK 464

Query: 481 SAHILDGTYLQT-ENAPKPWD 486
            +       L+T EN+P   D
Sbjct: 481 PSVAEAAAPLKTPENSPSAED 464

The following BLAST results are available for this feature:

BLAST of HG10023326 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898125.1	8.5e-229	92.10	nuclear pore complex protein NUP50A-like [Benincasa hispida]	[more]
TYK04047.1	6.5e-213	86.90	nuclear pore complex protein NUP50A isoform X1 [Cucumis melo var. makuwa]	[more]
XP_008462135.1	6.5e-213	86.90	PREDICTED: nuclear pore complex protein NUP50A isoform X1 [Cucumis melo] >XP_008...	[more]
XP_008462138.1	9.4e-212	89.39	PREDICTED: nuclear pore complex protein NUP50A isoform X2 [Cucumis melo]	[more]
KAA0059280.1	9.4e-212	89.39	nuclear pore complex protein NUP50A isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of HG10023326 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C829	2.0e-84	45.74	Nuclear pore complex protein NUP50A OS=Arabidopsis thaliana OX=3702 GN=NUP50A PE...	[more]
Q9LW88	8.9e-80	42.51	Nuclear pore complex protein NUP50B OS=Arabidopsis thaliana OX=3702 GN=NUP50B PE...	[more]
A0A0B4K7J2	1.0e-11	33.08	E3 SUMO-protein ligase RanBP2 OS=Drosophila melanogaster OX=7227 GN=Nup358 PE=1 ...	[more]
Q86VV4	1.7e-06	34.09	Ran-binding protein 3-like OS=Homo sapiens OX=9606 GN=RANBP3L PE=1 SV=2	[more]
Q6PDH4	3.8e-06	30.60	Ran-binding protein 3-like OS=Mus musculus OX=10090 GN=Ranbp3l PE=1 SV=1	[more]

BLAST of HG10023326 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E3Q0	3.2e-213	86.90	nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5D3BX12	3.2e-213	86.90	Nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A5A7UW04	4.6e-212	89.39	Nuclear pore complex protein NUP50A isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3CHQ9	4.6e-212	89.39	nuclear pore complex protein NUP50A isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A0A0KAD0	2.8e-209	85.45	RanBD1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G446650 PE=4...	[more]

BLAST of HG10023326 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52380.1	1.5e-85	45.74	NUP50 (Nucleoporin 50 kDa) protein	[more]
AT3G15970.1	6.3e-81	42.51	NUP50 (Nucleoporin 50 kDa) protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000156	Ran binding domain	SMART	SM00160	ranbd_3	coord: 335..461 e-value: 1.7E-16 score: 70.8
IPR000156	Ran binding domain	PFAM	PF00638	Ran_BP1	coord: 346..462 e-value: 7.1E-17 score: 61.8
IPR000156	Ran binding domain	PROSITE	PS50196	RANBD1	coord: 338..467 score: 18.153183
IPR011993	PH-like domain superfamily	GENE3D	2.30.29.30		coord: 329..470 e-value: 8.2E-36 score: 124.9
IPR015007	Nuclear pore complex, NUP2/50/61	PFAM	PF08911	NUP50	coord: 12..73 e-value: 8.6E-15 score: 55.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..263
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..269
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 134..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..130
None	No IPR available	PANTHER	PTHR23138:SF142	NUCLEAR PORE COMPLEX PROTEIN NUP50A-RELATED	coord: 1..481
None	No IPR available	PANTHER	PTHR23138	RAN BINDING PROTEIN	coord: 1..481
None	No IPR available	CDD	cd13169	RanBD_NUP50_plant	coord: 348..464 e-value: 7.42039E-67 score: 209.998
None	No IPR available	SUPERFAMILY	50729	PH domain-like	coord: 338..465

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10023326.1	HG10023326.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046907	intracellular transport
biological_process	GO:0051028	mRNA transport
biological_process	GO:0015031	protein transport
biological_process	GO:0050790	regulation of catalytic activity
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0005096	GTPase activator activity