HG10023325 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10023325
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionthionin-like protein 2
LocationChr05: 33095293 .. 33100765 (+)
RNA-Seq ExpressionHG10023325
SyntenyHG10023325
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGTCAATTGTTCTAATTTGCTTCATTCTGAGCTTAGTTGCTGGAAGGTCCACAGCCTCATTTGGGAAGTGCTATGCGAAGTGCTTTGTAGTGTGTGCTATCACACCAGGCATTCCCATTGGCACTTGTGGTGCAAAGTGCTTGGCTGATTGCCTTTTCATTGCTTCTTCCCCTATGGATTTGGACCATATGGACACTCATTACTTCTGCAAACTTGGTTGTGCCACTTCTCTCTGCACCAAGTTCAGCACCAAGAAGGACCCTGGTCAGAAAATTTCTAATATTCTCGTAGTACTTATTTTAATTTCTTTTTTTCTTTTTTTCTTTCTAACATGGTTGAATCCATTGTATTGATTTTAAATGTTATCGACAGTGATAGTCAAAGTAATATATGTATATATAATTCTCTATACTACATGTAGTGCGGTTAAGATTTTTCTGATGAAATAATTCGTAGAAAAGATATTTTTGCCAACGTCAAATATGAAACGTTGGAAAAAGTTGCCCTCGCTATGACTAACACTTAAAATGAGAGTAAATTTTCCTCTCTTGATATTGGATGTTATTCATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGGGTTATTGATGAACTTGGCAGCTGAGAAGAAAGTAGAAAGCTGTGTGAACTCGTGTGGTCAAACGTGCATGAAAGCTTAGAAAGCAAAAGGATGAAGGGAGAGAGGAGATGGAGCTGGGATTGGCTTAAAGATATACTATGAATAAACAAAAATCAGTGGTCAAAACAAAACCATTGGTTTACAAGGCTTATTCCAGATTTAAGCATATGTTTTGATATATTATATAGTCTCAAGTTTCTGCATGTGGTAGTTAATTATGATCAATATGTAAAAAAAACAGTGTTGTTTTTTTCTATGTTATATGAGAATGGTGTGTCATGTCAAAGAATTTTACCTATGCCTATGTGTGTGTGTTATTGGTTATTAAATAGATATTAATAATCTCACAATCAAACTTTATTTATATTCTATAAAAAGAAAGAAAATCCTAAACAATTTAATTTGATAGTGCCCTTGTTAAGATCATGATCTTACAATTAACTATTAATTGAAATGACCAGTTTGATGATAAAAACTTCATATGTTCCTTTGTAGATTTATAAAACATAATAATATTAGAGTTGTTTTCGGATATAGAAAATTTTTACTTCATATCAGGGATAGACCATGATAGAATTCTATTGCTTGAGCAATAGAAAGAGACTTCTATCGCTTATATTTATAAATAGTTTGAATATTTTTCTGTTTATAATAATTTTCTATAATATTATTTACAATTAATTTTTAAAACTAGGAAGGAATAGTTAAAAAAAATAAATACACCTCTTCATGAGATGCATTCCAAAAATTAATAATAATAATAATAAGTTTTTAAGAAACACATTCATCAGAAAAATTAATAAAACGATAAGTATTCTCAATTTTAATTTTAAATGTTTTGAAGAGACACATTACTATTAAAAAAAAAACACTTATTTTTTCTAATTTTTGGAAAATTTTCACAAATAGAAAAAATGTCAAACTATTTATAGAAAATAATAATAATAATAATAATAAAAAACACTGATAGATCTTGATAGACTTTTATCAGCATCTATCAGCGATAGACTTCTATCATTTCTATCACTGATAGATCGCGTCTATCACAACTATCAAAAAATTTTGCTATTTTGTGTAAATAGTTTCCCTTATTTTTTTTATTTTTAAAGATTTTCCCTAATTTTTTTAGTATTTATTCCTCACCTGATCTGGTTATTAAGTTCTCTCAAATTTTTAAATTTTACTTGATTTTTTTTTTTAAAATCTTAAGAACTATTAGATAATATTATTTCCTTTTTTATATTTTATATATACTTTTATAAGAAATAAATAATTAGAAAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTCCAAATGAACTAAAGATTTTCTTTGGTATTCGATAAGATTCAGAAATCAGACTAATTGGTGACCTTGGTTTTATTTTTCCGTTCAATTAAAATTTTCTCTAATGGAAAACATCATGTAACTCACAAATTTCAGCCTACTTAATAAATTAAGGGGTTTGAAATAATTAATGGCAACATGTTTCCTTCAAAGCTTTCTAAAAATTAAACAACAAAAAATTTCACTGTTTTTTTTATAGTCTCCCAAATAATACCAAAATTAATTAAAACTAGTTGATGAATTTAGCTCCATTTTCTCTAATTTTCAACGCCCATAAAAAGCATGGCGATTGGAATTTTAAATTTAAAATTTAAGTGAAAATATATCAAAGCTTAGTGGCCATGCCATCACATTGTGACATTATAGCAAATAATTAAGTCATGGTAGTGAAAAGGGTTGTGATATATTCACTAAAAAAACAATCATTTTAAATCAATTTTTAATTCAAGTTGAAGGAGAAATTATGGTCTAAAATGTAAGACTTAATAAGTATATGGTTAGCCATTTAAAGAATAAGAAAATTTAAGCTATAAAATCTTAAAAAATTATTTGCATGATGCATACGCATTTGATGAACATGAATATAGGTAGCAGTTCTTGTAAACTTTTCATATATGTGTGAATCTGTACGGTATGGATTAATTTGGACCCAAATATGAGTGCAGAGAGCCAAATAAGATATAATCCTGACTTGACTTGCAATTGAGTAGGATACATTATTATATAACTCTATATGAGATAACTTTAATTGGAAATCTGAGAAAACCTCATTTGGGACTTAAACTTTTGATCGATTTCATCTCTATTCTAGAGTTCTTCATTTCTAATTTTGGCATCAGAGTCATTTTTCTTTGTTTTGCGTATCCCTCTTCTCCAAATTACAAATTTACCACACGTAAAGATCATATGTGTTTTTTCCTATTCGGATTTTAACATCAACTATATATATATATATATATATATATATATATATATATATTCATTCGATACTCAATACTTAGAGGTTAAGATGTTTTTTAATTTTTCCTATGTAGAGTGATCTCATAATAATTTAAATAAGGAATGAAATATTCTGCATAATCAGCCACTTAAATAACATTTTCTAAAACAAGTTCCCTTGAAGACATATTATGAGACAACCACAAAATTATTCAAGGAGAAAAAGCTAGGAGTCTTGAATATATATATATATATATATATATATATATATATATATATATATATATATATATAGCCAATCTCATGAACTAAAGATGCTAAGATTCAAGTGCCAAATCTATCTTCCAAATCATGGTCCAAAAATTCTTGAGTGATATTGCTCAATCAACATTTTGAAACATGTGGTTTCATGAACTCTATATATTTTTTAGTACAAGGAACTTGTTCTTTTGGAACCTTCATTTTACCCACTCGATTTGAAAAGAAATTGTTTTTATTTATTTTTTATCTCATTTCTTTTTATCACAATTTTCAACCCAATACTATATTCAACAAACTTCCCTTTATAAAGGAAATTTGTGATTAAATTAGTGAGGGTTACTTCGTTCTTTGGCCGTCATCAGTTTGAATAAGAATTCACGTGAATTTGTCTTCAACCTATCTGTATCAACTCTAATATATTAGAATACATGTTTATTTACTATAGTGAGAGGATCTAACCTAAGAACAATAAACCCAAAAAGAGCATTTTGGAGGAACATAGTTGAAGGTTTCTCTAATTATTAATGGGTATATAATTTGTGTTAAAATTGTATAAGATCACATAGACTAAAAATTAGTCTATCACTTCCTAAAAACAATCATGCTCTGAACGCGTAGTTGAGGTAGGCAAGCGGATACTGGAATACCTGAAGCTATCGGGAGCGGAGATTGACCTCCAGTTTCAGAGGGAGAGTCAAGAGATGGAAAAATATGGAGATTTCATGGAATGTCAAGAGAGATGTTTTTGTGTCCTTCATTAATTTTATTCTTTGATGTCATAAAAAATATTACGGAAATTACTCTAAACAAAAAAAATATCAAATTATTTATAAATATAGAAAAATTTCACTATTTACCATATTTACAACGGTCTTAGATGGTCGAATTTAAGGGTATTTAAGTAAACATGGCCAATTTTGTAATTAAGTTGATTTTCCACCCTCCTAGGGCTCTAACGTGAAAGGTTTTTTAATCCTCGGAGAAAATTTCTGCAAACGTGAGGTGAAAGGGAAGCGCAGCCGTGGGTCATCGTCGGCCGTTCGTTTTCCGATAGTGGCGTCGTGAATACTGTTTCAGCGGCGGGGTTGCAGCAGCGTGGACGAAGCGTTGCCGTTTGGATCTCCGATTTGCAGGGTGGTTTCAGAGGCTATAGTTGGCGCGTGGATCTCTCCATAATCAGTGGTCGTTGGCCGGCGGTAAGTCGGGTTTGGCCAAGATTTTCTCAAGCCTTGTGGCTTTTATTAATTTTTAATAAGATATTACAAATTGTTGATTCTTGTTTAAAATCTGTAATGGGTGACTTATTGCTATTAATAAAATTACTCTAAACTGGTTCGAACCATTATATACGGTTGTGTTCTTTGTTTATTGCTTTGATTTATTTGCTGGTTATTGCATTCTGTTTAGGCAAATTTAGATTTCGGAATCAATTTCCTTAGCTGCTTATTTAAGAACCACTCTCTTACCCACAACCTCAAAAACCACACATAATTTGAGAAAAATGAAGTCAGTTGTTGTAATTTGCTTCATTCTGAGCTTAGTTGCTGGAAGATCCACAGCCTCATTTGGGGACTGCTATTCCAACTGCTTTAATGAGTGTGTTAAAACCATACCACCGGTTCTCTTTCACGCTTGTACTTTAAAGTGCTTCTCTTGCATCACCAATCCATCTTCCACTATGGATTTGGACCATGTGGACACTAATCACTTCTGCAAACTTGGTTGTGCCACTTCTCTATGCACCAAATTCAGCACCAAGGAAGATCCTGGTCAGAAAATTTCTAATACTCTCGTAGTATCTATTTTAATTCATTTCTCTTCTTTTTTTATATTTTCTTCACATTGTTGGATTCGTCTATCAATTTTAAACGTGGTTAGACAGTGAGAGTCATAGTAATATATGTGCTAAATTTTCTATACTACTGTAGTGTAGTGTGTTAGAAGGTTTACCAACCCATATCAGTATTTTTTATACTTTAAGCACCGTAAGTGTCGTCTAAGATTTTTCTGATGAAAATAATTCATCAGAGAAGACATTTTTCTCAACGTCGAAGAACATTAAACGTCGAGAAGCGCTATCCTTGTTGTGACTGACAATTAAAATGAGAGTAGTATTCATACTAAATTTTCCTCTCTTGATATTTTCTCTAATTTGATGGATGTTTTTCATTTTTTGGTTTTTGATGAACTTGGCAGCTGAGGAGAAAGTAGAAGGCTGTGTGAACGCATGTGGTCAAACATGCACGAAAGCTTAG

mRNA sequence

ATGAAGTCAATTGTTCTAATTTGCTTCATTCTGAGCTTAGTTGCTGGAAGGTCCACAGCCTCATTTGGGAAGTGCTATGCGAAGTGCTTTGTAGTGTGTGCTATCACACCAGGCATTCCCATTGGCACTTGTGGTGCAAAGTGCTTGGCTGATTGCCTTTTCATTGCTTCTTCCCCTATGGATTTGGACCATATGGACACTCATTACTTCTGCAAACTTGGTTGTGCCACTTCTCTCTGCACCAAGTTCAGCACCAAGAAGGACCCTGGTGAAAGGGAAGCGCAGCCGTGGGTCATCGTCGGCCGTTCGTTTTCCGATAGTGGCGTCGTGAATACTGTTTCAGCGGCGGGGTTGCAGCAGCGTGGACGAAGCGTTGCCGTTTGGATCTCCGATTTGCAGGGTGGTTTCAGAGGCTATAGTTGGCGCGTGGATCTCTCCATAATCAGTGGTCGTTGGCCGGCGTGCTTCTCTTGCATCACCAATCCATCTTCCACTATGGATTTGGACCATGTGGACACTAATCACTTCTGCAAACTTGGTTGTGCCACTTCTCTATGCACCAAATTCAGCACCAAGGAAGATCCTGCTGAGGAGAAAGTAGAAGGCTGTGTGAACGCATGTGGTCAAACATGCACGAAAGCTTAG

Coding sequence (CDS)

ATGAAGTCAATTGTTCTAATTTGCTTCATTCTGAGCTTAGTTGCTGGAAGGTCCACAGCCTCATTTGGGAAGTGCTATGCGAAGTGCTTTGTAGTGTGTGCTATCACACCAGGCATTCCCATTGGCACTTGTGGTGCAAAGTGCTTGGCTGATTGCCTTTTCATTGCTTCTTCCCCTATGGATTTGGACCATATGGACACTCATTACTTCTGCAAACTTGGTTGTGCCACTTCTCTCTGCACCAAGTTCAGCACCAAGAAGGACCCTGGTGAAAGGGAAGCGCAGCCGTGGGTCATCGTCGGCCGTTCGTTTTCCGATAGTGGCGTCGTGAATACTGTTTCAGCGGCGGGGTTGCAGCAGCGTGGACGAAGCGTTGCCGTTTGGATCTCCGATTTGCAGGGTGGTTTCAGAGGCTATAGTTGGCGCGTGGATCTCTCCATAATCAGTGGTCGTTGGCCGGCGTGCTTCTCTTGCATCACCAATCCATCTTCCACTATGGATTTGGACCATGTGGACACTAATCACTTCTGCAAACTTGGTTGTGCCACTTCTCTATGCACCAAATTCAGCACCAAGGAAGATCCTGCTGAGGAGAAAGTAGAAGGCTGTGTGAACGCATGTGGTCAAACATGCACGAAAGCTTAG

Protein sequence

MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWVIVGRSFSDSGVVNTVSAAGLQQRGRSVAVWISDLQGGFRGYSWRVDLSIISGRWPACFSCITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDPAEEKVEGCVNACGQTCTKA
Homology
[Close]
BLAST of HG10023325 vs. NCBI nr
Match: XP_038899787.1 (thionin-like protein 2 [Benincasa hispida])

HSP 1 Score: 183.7 bits (465), Expect = 1.6e-42
Identity = 82/98 (83.67%), Postives = 91/98 (92.86%), Query Frame = 0 

Query: 1  MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPM 60
          MKS++LICFI+SLV GRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCL DCLFIASSP+
Sbjct: 1  MKSVILICFIMSLVVGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLGDCLFIASSPL 60

Query: 61 DLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWV 99
          D +H+DTHYFCKLGCATSLCTKFSTKKDP E++ +  V
Sbjct: 61 DFNHLDTHYFCKLGCATSLCTKFSTKKDPAEKKVESCV 98

[Close]
BLAST of HG10023325 vs. NCBI nr
Match: XP_023000407.1 (thionin-like protein 2 [Cucurbita maxima])

HSP 1 Score: 180.6 bits (457), Expect = 1.4e-41
Identity = 80/98 (81.63%), Postives = 91/98 (92.86%), Query Frame = 0 

Query: 1   MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPM 60
           MKS+V+ICFILSLVAGRSTASFGKCYAKCF+VCAITPG+PIGTCG KCLADCLF+AS+P 
Sbjct: 36  MKSVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPR 95

Query: 61  DLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWV 99
           DL+H+DTHYFCKLGCATSLCTKFSTK DP E++ +  V
Sbjct: 96  DLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCV 133

[Close]
BLAST of HG10023325 vs. NCBI nr
Match: KAG6593441.1 (Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 179.1 bits (453), Expect = 4.0e-41
Identity = 81/98 (82.65%), Postives = 90/98 (91.84%), Query Frame = 0 

Query: 1  MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPM 60
          MKSIV+ICFILSLVAGRSTASFGKCYAKCF+VCAITPG+PIGTCG KCLADCLF AS+P 
Sbjct: 1  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPR 60

Query: 61 DLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWV 99
          DL+H+DTHYFCKLGCATSLCTKFSTK DP E++ +  V
Sbjct: 61 DLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCV 98

[Close]
BLAST of HG10023325 vs. NCBI nr
Match: KAG7025781.1 (Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 179.1 bits (453), Expect = 4.0e-41
Identity = 81/98 (82.65%), Postives = 90/98 (91.84%), Query Frame = 0 

Query: 1  MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPM 60
          MKSIV+ICFILSLVAGRSTASFGKCYAKCF+VCAITPG+PIGTCG KCLADCLF AS+P 
Sbjct: 1  MKSIVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFPASAPT 60

Query: 61 DLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWV 99
          DL+H+DTHYFCKLGCATSLCTKFSTK DP E++ +  V
Sbjct: 61 DLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCV 98

[Close]
BLAST of HG10023325 vs. NCBI nr
Match: KAG7014098.1 (Thionin-like protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 167.9 bits (424), Expect = 9.3e-38
Identity = 74/95 (77.89%), Postives = 86/95 (90.53%), Query Frame = 0 

Query: 1  MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPM 60
          MKS+V+ICFILSL+AGRSTASF KCYAKCF+ CAITPGI +GTCGA CLA CLFIAS+PM
Sbjct: 1  MKSVVIICFILSLMAGRSTASFRKCYAKCFIACAITPGITLGTCGATCLAKCLFIASAPM 60

Query: 61 DLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQ 96
          D +HM+THYFCKLGCATS+CTKFSTK DP E++ +
Sbjct: 61 DFNHMNTHYFCKLGCATSMCTKFSTKNDPSEKKVE 95

[Close]
BLAST of HG10023325 vs. ExPASy Swiss-Prot
Match: A8MRP4 (Thionin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12663 PE=3 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 7.5e-06
Identity = 24/60 (40.00%), Postives = 38/60 (63.33%), Query Frame = 0 

Query: 158 CITNPS----STMDLDHVDTNHFCKLGCATSLCTKFSTKEDPAEEKVEGCVNACGQTCTK 214
           C+  PS    S+ ++D  ++++FCKLGCAT  C   S+ ++P  E+V  CV++C   CTK
Sbjct: 56  CLQQPSPPSVSSNNID--ESDYFCKLGCATYHCVSLSSIQNPNVERVSACVDSCSNKCTK 113

[Close]
BLAST of HG10023325 vs. ExPASy TrEMBL
Match: A0A0A0KC18 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G446640 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 1.2e-43
Identity = 86/106 (81.13%), Postives = 97/106 (91.51%), Query Frame = 0 

Query: 1   MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPM 60
           MKS+VLICFILSLVAGRSTASFGKCYAKCF+VCAITPGIP+GTCGAKCLADCLFIASSPM
Sbjct: 1   MKSVVLICFILSLVAGRSTASFGKCYAKCFIVCAITPGIPVGTCGAKCLADCLFIASSPM 60

Query: 61  DLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWVIVGRSFSD 107
           DL++MDTHYFCKLGCATS CTKFSTKKDPG++ +   V    S+++
Sbjct: 61  DLNYMDTHYFCKLGCATSRCTKFSTKKDPGKKLSNTSVTTYSSYTN 106

[Close]
BLAST of HG10023325 vs. ExPASy TrEMBL
Match: A0A6J1KDK0 (thionin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111494667 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 6.7e-42
Identity = 80/98 (81.63%), Postives = 91/98 (92.86%), Query Frame = 0 

Query: 1   MKSIVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSPM 60
           MKS+V+ICFILSLVAGRSTASFGKCYAKCF+VCAITPG+PIGTCG KCLADCLF+AS+P 
Sbjct: 36  MKSVVVICFILSLVAGRSTASFGKCYAKCFIVCAITPGVPIGTCGGKCLADCLFLASAPR 95

Query: 61  DLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWV 99
           DL+H+DTHYFCKLGCATSLCTKFSTK DP E++ +  V
Sbjct: 96  DLNHLDTHYFCKLGCATSLCTKFSTKTDPAEKKVESCV 133

[Close]
BLAST of HG10023325 vs. ExPASy TrEMBL
Match: A0A6J1DDL8 (thionin-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111019402 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.1e-31
Identity = 69/92 (75.00%), Postives = 79/92 (85.87%), Query Frame = 0 

Query: 4  IVLICFILSLVAGRSTASFGKCYAKCFVVCAITPGIPIGTCGAKCLADCLF-IASSPMDL 63
          ++L+  +LSLVAG+STASFGKCYAKCFVVCAITPGIP+GTC AKCL DCLF  AS+  D 
Sbjct: 6  LILVMLVLSLVAGKSTASFGKCYAKCFVVCAITPGIPVGTCAAKCLTDCLFRAASTTADF 65

Query: 64 -DHMDTHYFCKLGCATSLCTKFSTKKDPGERE 94
           D +DT YFCKLGCATSLCTKFSTKKDP E++
Sbjct: 66 NDQIDTRYFCKLGCATSLCTKFSTKKDPAEKK 97

[Close]
BLAST of HG10023325 vs. ExPASy TrEMBL
Match: A0A061GC54 (To encode a PR protein, Belongs to the plant thionin family with the following members:, putative OS=Theobroma cacao OX=3641 GN=TCM_028663 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.2e-25
Identity = 78/214 (36.45%), Postives = 103/214 (48.13%), Query Frame = 0 

Query: 1   MKSIVLICFILSLVAGRSTASFG-KCYAKCFVVCAITPGIPIGTCGAKCLADCLFIASSP 60
           + +++++C +L  + G+STA     CYA CF+ C          C AKCL DC+   S+ 
Sbjct: 6   VSAVLMVCLVLGTLVGQSTAQGTILCYAACFIPCMADSTTTTFYCAAKCLKDCILPKSTV 65

Query: 61  MDLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQPWVIVGRSFSDSGVVNTVSAAGLQ 120
             +   DT YFCKLGCAT+LCT  STK+DPG+  AQ                        
Sbjct: 66  GGI--KDTQYFCKLGCATALCTNISTKEDPGQSTAQ------------------------ 125

Query: 121 QRGRSVAVWISDLQGGFRGYSWRVDLSIISGRWPACFSCITNPSSTMDLDHVDTNHFCKL 180
             G +V  + +         +       I      C      P ST+     DT +FCKL
Sbjct: 126 --GTNVLCYAACFIPCMADPNTTTFYCTIK-----CLKNCILPKSTVG-GIKDTQYFCKL 185

Query: 181 GCATSLCTKFSTKEDPAEEKVEGCVNACGQTCTK 214
           GCAT+LCT  STKEDP E+KV  CV+AC  TC K
Sbjct: 186 GCATALCTNISTKEDPGEKKVGSCVDACSATCAK 185

[Close]
BLAST of HG10023325 vs. ExPASy TrEMBL
Match: A0A5D3BCH5 (Thionin-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00550 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.7e-22
Identity = 60/98 (61.22%), Postives = 69/98 (70.41%), Query Frame = 0 

Query: 1  MKSIVLICFILSLVAGRST--ASFGKCYAKCFVVCAITPGIP-IGTCGAKCLADCLFIAS 60
          M+SIVLI FILSLVAGRST      K + KC   CAI P IP +  C  KC+ADC+ +AS
Sbjct: 1  MRSIVLIHFILSLVAGRSTPVLDTAKWFVKCMAECAILPIIPVVSICAVKCMADCIPVAS 60

Query: 61 SPMDLDHMDTHYFCKLGCATSLCTKFSTKKDPGEREAQ 96
          SPMDL+ MDTHYFCKLGC T  CTK STKKD  E + +
Sbjct: 61 SPMDLNRMDTHYFCKLGCTTYRCTKLSTKKDLVENKVE 98

[Close]
BLAST of HG10023325 vs. TAIR 10
Match: AT1G12663.1 (Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant thionin (PR-13) family with the following members: At1g66100, At5g36910, At1g72260, At2g15010, At1g12663, At1g12660. )

HSP 1 Score: 52.4 bits (124), Expect = 5.3e-07
Identity = 24/60 (40.00%), Postives = 38/60 (63.33%), Query Frame = 0 

Query: 158 CITNPS----STMDLDHVDTNHFCKLGCATSLCTKFSTKEDPAEEKVEGCVNACGQTCTK 214
           C+  PS    S+ ++D  ++++FCKLGCAT  C   S+ ++P  E+V  CV++C   CTK
Sbjct: 56  CLQQPSPPSVSSNNID--ESDYFCKLGCATYHCVSLSSIQNPNVERVSACVDSCSNKCTK 113

[Close]
BLAST of HG10023325 vs. TAIR 10
Match: AT1G12672.2 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12663.1). )

HSP 1 Score: 50.4 bits (119), Expect = 2.0e-06
Identity = 23/60 (38.33%), Postives = 37/60 (61.67%), Query Frame = 0 

Query: 157 SCITNPSSTMD----LDHVDTNHFCKLGCATSLCTKFSTKEDPAEEKVEGCVNACGQTCT 213
           +C+  PSS MD    ++H D  ++CKLGC+T  C   S+ ++P  +KV  CV++C   C+
Sbjct: 44  TCLEPPSSQMDSTNEINHND--YYCKLGCSTHHCASLSSIQNPNVDKVVDCVDSCSDKCS 101

[Close]
BLAST of HG10023325 vs. TAIR 10
Match: AT1G12672.1 (unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G12663.1); Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 5.9e-06
Identity = 20/54 (37.04%), Postives = 34/54 (62.96%), Query Frame = 0 

Query: 159 ITNPSSTMDLDHVDTNHFCKLGCATSLCTKFSTKEDPAEEKVEGCVNACGQTCT 213
           +T   ST +++H D  ++CKLGC+T  C   S+ ++P  +KV  CV++C   C+
Sbjct: 12  VTQMDSTNEINHND--YYCKLGCSTHHCASLSSIQNPNVDKVVDCVDSCSDKCS 63

The following BLAST results are available for this feature:
BLAST of HG10023325 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038899787.11.6e-4283.67thionin-like protein 2 [Benincasa hispida][more]
XP_023000407.11.4e-4181.63thionin-like protein 2 [Cucurbita maxima][more]
KAG6593441.14.0e-4182.65Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG7025781.14.0e-4182.65Thionin-like protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma][more]
KAG7014098.19.3e-3877.89Thionin-like protein 2 [Cucurbita argyrosperma subsp. argyrosperma][more]
BLAST of HG10023325 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A8MRP47.5e-0640.00Thionin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At1g12663 PE=3 SV=1[more]
BLAST of HG10023325 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KC181.2e-4381.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G446640 PE=4 SV=1[more]
A0A6J1KDK06.7e-4281.63thionin-like protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111494667 PE=4 SV=1[more]
A0A6J1DDL81.1e-3175.00thionin-like protein 2 OS=Momordica charantia OX=3673 GN=LOC111019402 PE=4 SV=1[more]
A0A061GC541.2e-2536.45To encode a PR protein, Belongs to the plant thionin family with the following m... [more]
A0A5D3BCH52.7e-2261.22Thionin-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold8... [more]
BLAST of HG10023325 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G12663.15.3e-0740.00Predicted to encode a PR (pathogenesis-related) protein. Belongs to the plant t... [more]
AT1G12672.22.0e-0638.33unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot... [more]
AT1G12672.15.9e-0637.04unknown protein; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana prot... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36312:SF1THIONIN-LIKE PROTEIN 1coord: 2..95
NoneNo IPR availablePANTHERPTHR36312:SF1THIONIN-LIKE PROTEIN 1coord: 157..213
IPR038975Thionin-like proteinPANTHERPTHR36312THIONIN-LIKE PROTEIN 1coord: 157..213
IPR038975Thionin-like proteinPANTHERPTHR36312THIONIN-LIKE PROTEIN 1coord: 2..95

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10023325.1HG10023325.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016020 membrane