HG10023286 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10023286
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionlate embryogenesis abundant protein 1
LocationChr05: 32753549 .. 32754323 (-)
RNA-Seq ExpressionHG10023286
SyntenyHG10023286
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGCCATCAGGATATTAGCCACAAGGCTGGTGAGATTGTTGGCCAAGCTCAGGTAATTAATTAGCAAATTAGTTTTGTTTGGTGTATAATTATATATTTAACATTAGATTAATTTATTGTTTTTTTTTTATTATTTTTAATTTTATGATCAGGTAAAGAAAGACGAGATTATGAACCAAGCATCTCATGCAGCTCATGATGCCAAAGACAAGGCTTCTACGCATGACCAATCTGCCGCCCAAACTGCCTCTGACCTCAAGGACCAAGCTGCAAATTTCCTTCAACAGGTCATTTTTTTTAATTATTATTTAATACCTCTTTTTTTAGTTTTATTTAAAAAAAATTTTTTTAACTATTTAGGGGAAAAAATTTCAGGGCGGAGCCACCAAAGCATTTTAGAAAAAAAAAAATGTAAACTGTAAAGTTTTTTTTTTTTTTTAATTATAAAAGCCAAAGAGACTGGCATAAAGCTTTACATTATTGACTTCGAGATTAAAGCTTAATTTTGAAGGATTGAATTTAAGATTTATTTAAAGTGAACAAAAATTAAACAAATTTTATATTATAGGATTGATGGATCATAAATTATCATAATTTACAATTTTTTTTCTTTTATGGTGAAATATGTATAGACTGGGGAGCAAGTGAAGAACATAGCACAAGGAGCAGCTGAGGCAGTAAAAAACACACTTGGGATGAACACTGATAACACTTCAAACACCAACAATCCAACCAACAACCCTACCAACAATCCATCCACTAGAATTTAA

mRNA sequence

ATGGCAAGCCATCAGGATATTAGCCACAAGGCTGGTGAGATTGTTGGCCAAGCTCAGGTAAAGAAAGACGAGATTATGAACCAAGCATCTCATGCAGCTCATGATGCCAAAGACAAGGCTTCTACGCATGACCAATCTGCCGCCCAAACTGCCTCTGACCTCAAGGACCAAGCTGCAAATTTCCTTCAACAGACTGGGGAGCAAGTGAAGAACATAGCACAAGGAGCAGCTGAGGCAGTAAAAAACACACTTGGGATGAACACTGATAACACTTCAAACACCAACAATCCAACCAACAACCCTACCAACAATCCATCCACTAGAATTTAA

Coding sequence (CDS)

ATGGCAAGCCATCAGGATATTAGCCACAAGGCTGGTGAGATTGTTGGCCAAGCTCAGGTAAAGAAAGACGAGATTATGAACCAAGCATCTCATGCAGCTCATGATGCCAAAGACAAGGCTTCTACGCATGACCAATCTGCCGCCCAAACTGCCTCTGACCTCAAGGACCAAGCTGCAAATTTCCTTCAACAGACTGGGGAGCAAGTGAAGAACATAGCACAAGGAGCAGCTGAGGCAGTAAAAAACACACTTGGGATGAACACTGATAACACTTCAAACACCAACAATCCAACCAACAACCCTACCAACAATCCATCCACTAGAATTTAA

Protein sequence

MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPTNNPTNNPSTRI
Homology
BLAST of HG10023286 vs. NCBI nr
Match: XP_038899752.1 (late embryogenesis abundant protein 2-like [Benincasa hispida])

HSP 1 Score: 189.1 bits (479), Expect = 2.0e-44
Identity = 102/109 (93.58%), Postives = 107/109 (98.17%), Query Frame = 0

Query: 1   MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQAAN 60
           MASHQDISHKAGEIVGQAQVKKDEI+NQASHAAHD+KDKASTHDQS AQTAS+LKDQAAN
Sbjct: 1   MASHQDISHKAGEIVGQAQVKKDEILNQASHAAHDSKDKASTHDQSPAQTASNLKDQAAN 60

Query: 61  FLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPTNNPTNNPSTRI 110
           FLQQTGEQVKN+AQGAA+AVKNTLGMNTDNT NTNNPTNNPTNNPSTRI
Sbjct: 61  FLQQTGEQVKNMAQGAADAVKNTLGMNTDNTPNTNNPTNNPTNNPSTRI 109

BLAST of HG10023286 vs. NCBI nr
Match: XP_023000409.1 (late embryogenesis abundant protein 1 [Cucurbita maxima])

HSP 1 Score: 146.0 bits (367), Expect = 1.9e-31
Identity = 86/111 (77.48%), Postives = 94/111 (84.68%), Query Frame = 0

Query: 1   MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKAST--HDQSAAQTASDLKDQA 60
           MAS QDISH  GE+VGQAQVKKDE+MNQA++AA +AKD AST     SAAQTASDLKDQA
Sbjct: 1   MASQQDISHSVGEVVGQAQVKKDEVMNQAANAAQEAKDSASTTLDQSSAAQTASDLKDQA 60

Query: 61  ANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPTNNPTNNPSTRI 110
           ANFLQQTGEQVKN+AQGAAEAVKNTLGMNTD++SN    TNNPTN PS  I
Sbjct: 61  ANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANTNNPTNTPSPTI 111

BLAST of HG10023286 vs. NCBI nr
Match: XP_023515217.1 (late embryogenesis abundant protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 144.4 bits (363), Expect = 5.6e-31
Identity = 85/111 (76.58%), Postives = 94/111 (84.68%), Query Frame = 0

Query: 1   MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKAST--HDQSAAQTASDLKDQA 60
           MAS QDISH  GE+VGQAQVKKDE++NQA++AA +AKD AST     SAAQTASDLKDQA
Sbjct: 1   MASQQDISHNVGEVVGQAQVKKDEVVNQAANAAQEAKDSASTTLDQSSAAQTASDLKDQA 60

Query: 61  ANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPTNNPTNNPSTRI 110
           ANFLQQTGEQVKN+AQGAAEAVKNTLGMNTD++SN    TNNPTN PS  I
Sbjct: 61  ANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANTNNPTNTPSPTI 111

BLAST of HG10023286 vs. NCBI nr
Match: KAA0058773.1 (late embryogenesis abundant protein 1 [Cucumis melo var. makuwa] >TYK10567.1 late embryogenesis abundant protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 142.9 bits (359), Expect = 1.6e-30
Identity = 88/120 (73.33%), Postives = 93/120 (77.50%), Query Frame = 0

Query: 1   MASHQD-ISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQAA 60
           MASHQD +SHKAGE VGQAQVKKDE+MNQ            + HDQSA QTASDLKDQAA
Sbjct: 1   MASHQDNLSHKAGETVGQAQVKKDEMMNQ-----------PTAHDQSATQTASDLKDQAA 60

Query: 61  NFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSN----------TNNPTNNPTNNPSTRI 110
           NFLQQTGEQVKN+AQGAAEAVKNTLGMNTDNTSN          T NP+NNPTNNPSTRI
Sbjct: 61  NFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPTNNPTTNPSNNPTNNPSTRI 109

BLAST of HG10023286 vs. NCBI nr
Match: XP_022964497.1 (late embryogenesis abundant protein 1 [Cucurbita moschata])

HSP 1 Score: 141.7 bits (356), Expect = 3.6e-30
Identity = 84/111 (75.68%), Postives = 93/111 (83.78%), Query Frame = 0

Query: 1   MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKAST--HDQSAAQTASDLKDQA 60
           MAS QDISH  GE VGQAQVKKDE++NQA+++A +AKD AST     SAAQTASDLKDQA
Sbjct: 1   MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQA 60

Query: 61  ANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPTNNPTNNPSTRI 110
           ANFLQQTGEQVKN+AQGAAEAVKNTLGMNTD++SN    TNNPTN PS  I
Sbjct: 61  ANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANTNNPTNTPSPTI 111

BLAST of HG10023286 vs. ExPASy Swiss-Prot
Match: O49817 (Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 3.8e-06
Identity = 39/99 (39.39%), Postives = 50/99 (50.51%), Query Frame = 0

Query: 5   QDISHKAGEIVGQAQVKKDEIMNQASHAAHD----AKDKASTHDQSAAQTASDLKDQAAN 64
           Q    K  +    A+ K  +        A D    AK+K S   QS  +TA   KD +A 
Sbjct: 55  QAAKEKTQQTAQAAKDKTQQTTQATKEKAQDTTGRAKEKGSEMGQSTKETAQSGKDNSAG 114

Query: 65  FLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPTN 100
           FLQQTGE+ K +AQGA +AVK T GM  D+    + PTN
Sbjct: 115 FLQQTGEKAKGMAQGATDAVKQTFGMTNDDQDKDHFPTN 153

BLAST of HG10023286 vs. ExPASy Swiss-Prot
Match: Q96270 (Late embryogenesis abundant protein 7 OS=Arabidopsis thaliana OX=3702 GN=LEA7 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 5.0e-06
Identity = 40/114 (35.09%), Postives = 54/114 (47.37%), Query Frame = 0

Query: 1   MASHQDISHKAGEIVGQAQVKKDEIM----------------------NQASHAAHDAKD 60
           MASHQ+ S+KAGE  G+AQ K  E M                       +A   A  AKD
Sbjct: 1   MASHQEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKD 60

Query: 61  KASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTS 93
           K S   Q+  + A + KD+  +++ +TGE +KN A  AAE  K T     + TS
Sbjct: 61  KTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTS 114

BLAST of HG10023286 vs. ExPASy Swiss-Prot
Match: O49816 (Late embryogenesis abundant protein 1 OS=Cicer arietinum OX=3827 PE=2 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 6.5e-06
Identity = 37/98 (37.76%), Postives = 51/98 (52.04%), Query Frame = 0

Query: 2   ASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQAANF 61
           A+  +    A     + Q   +    +A      A++K S   QS  +TA   KD +A F
Sbjct: 78  AAKDETQQTAQAAKDKTQQTTEATKEKAQDTTGRAREKGSEMGQSTKETAQSGKDNSAGF 137

Query: 62  LQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPTN 100
           LQQTGE+VK +AQGA +AVK T GM  D+    + PTN
Sbjct: 138 LQQTGEKVKGMAQGATDAVKQTFGMANDDKDKDHFPTN 175

BLAST of HG10023286 vs. ExPASy Swiss-Prot
Match: Q9LW12 (Late embryogenesis abundant protein 29 OS=Arabidopsis thaliana OX=3702 GN=LEA29 PE=2 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 7.9e-04
Identity = 37/104 (35.58%), Postives = 54/104 (51.92%), Query Frame = 0

Query: 5   QDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQAANFLQQ 64
           ++   KAG  + +     + I N+A  AA   K+ A    Q   +TA   +D+   FL Q
Sbjct: 113 REAKDKAGSYLSET---GEAIKNKAQDAAQYTKETAQGAAQYTKETAEAGRDKTGGFLSQ 172

Query: 65  TGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPTNNPTNNPSTR 109
           TGE VK +A GAA+AVK+T GM T+     + P +  T   +TR
Sbjct: 173 TGEHVKQMAMGAADAVKHTFGMATEEEDKEHYPGSTTTTTATTR 213

BLAST of HG10023286 vs. ExPASy TrEMBL
Match: A0A6J1KJU5 (late embryogenesis abundant protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111494669 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 9.3e-32
Identity = 86/111 (77.48%), Postives = 94/111 (84.68%), Query Frame = 0

Query: 1   MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKAST--HDQSAAQTASDLKDQA 60
           MAS QDISH  GE+VGQAQVKKDE+MNQA++AA +AKD AST     SAAQTASDLKDQA
Sbjct: 1   MASQQDISHSVGEVVGQAQVKKDEVMNQAANAAQEAKDSASTTLDQSSAAQTASDLKDQA 60

Query: 61  ANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPTNNPTNNPSTRI 110
           ANFLQQTGEQVKN+AQGAAEAVKNTLGMNTD++SN    TNNPTN PS  I
Sbjct: 61  ANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANTNNPTNTPSPTI 111

BLAST of HG10023286 vs. ExPASy TrEMBL
Match: A0A5D3CF20 (Late embryogenesis abundant protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002210 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 7.9e-31
Identity = 88/120 (73.33%), Postives = 93/120 (77.50%), Query Frame = 0

Query: 1   MASHQD-ISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQAA 60
           MASHQD +SHKAGE VGQAQVKKDE+MNQ            + HDQSA QTASDLKDQAA
Sbjct: 1   MASHQDNLSHKAGETVGQAQVKKDEMMNQ-----------PTAHDQSATQTASDLKDQAA 60

Query: 61  NFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSN----------TNNPTNNPTNNPSTRI 110
           NFLQQTGEQVKN+AQGAAEAVKNTLGMNTDNTSN          T NP+NNPTNNPSTRI
Sbjct: 61  NFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPTNNPTTNPSNNPTNNPSTRI 109

BLAST of HG10023286 vs. ExPASy TrEMBL
Match: A0A6J1HHY8 (late embryogenesis abundant protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111464504 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.8e-30
Identity = 84/111 (75.68%), Postives = 93/111 (83.78%), Query Frame = 0

Query: 1   MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKAST--HDQSAAQTASDLKDQA 60
           MAS QDISH  GE VGQAQVKKDE++NQA+++A +AKD AST     SAAQTASDLKDQA
Sbjct: 1   MASQQDISHSVGEAVGQAQVKKDEVINQAANSAQEAKDSASTTLDQSSAAQTASDLKDQA 60

Query: 61  ANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPTNNPTNNPSTRI 110
           ANFLQQTGEQVKN+AQGAAEAVKNTLGMNTD++SN    TNNPTN PS  I
Sbjct: 61  ANFLQQTGEQVKNMAQGAAEAVKNTLGMNTDSSSNAAANTNNPTNTPSPTI 111

BLAST of HG10023286 vs. ExPASy TrEMBL
Match: A0A1S3CF46 (late embryogenesis abundant protein 1 OS=Cucumis melo OX=3656 GN=LOC103499779 PE=4 SV=1)

HSP 1 Score: 141.0 bits (354), Expect = 3.0e-30
Identity = 85/109 (77.98%), Postives = 90/109 (82.57%), Query Frame = 0

Query: 1   MASHQD-ISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQAA 60
           MASHQD +SHKAGE VGQAQVKKDE+MNQ            + HDQSA QTASDLKDQAA
Sbjct: 1   MASHQDNLSHKAGETVGQAQVKKDEMMNQ-----------PTAHDQSATQTASDLKDQAA 60

Query: 61  NFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTS--NTNNPTNNPTNNPS 107
           NFLQQTGEQVKN+AQGAAEAVKNTLGMNTDNTS  N+NNPTNNPT NPS
Sbjct: 61  NFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNPNSNNPTNNPTTNPS 98

BLAST of HG10023286 vs. ExPASy TrEMBL
Match: A0A0A0K8V2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433240 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 4.8e-28
Identity = 83/118 (70.34%), Postives = 92/118 (77.97%), Query Frame = 0

Query: 1   MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQ-SAAQTASDLKDQAA 60
           MASHQD+SHKA EIVGQAQVK+DE+MNQ            +T DQ SAAQTA+DLKDQAA
Sbjct: 1   MASHQDLSHKADEIVGQAQVKRDEMMNQ-----------PTTQDQSSAAQTATDLKDQAA 60

Query: 61  NFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNT----------NNPTNNPTNNPST 108
           +FLQQTGEQVKN+AQGAAEAVKNTLGMNTDNTSNT          NNPTNNP NNP++
Sbjct: 61  SFLQQTGEQVKNMAQGAAEAVKNTLGMNTDNTSNTNTHNPANNSANNPTNNPANNPTS 107

BLAST of HG10023286 vs. TAIR 10
Match: AT1G52680.1 (late embryogenesis abundant protein-related / LEA protein-related )

HSP 1 Score: 75.9 bits (185), Expect = 2.3e-14
Identity = 52/114 (45.61%), Postives = 71/114 (62.28%), Query Frame = 0

Query: 1   MASHQDISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASD-----LK 60
           M+S Q +SH AGE+ GQ Q+KK+E +N  SHA +   D   TH QS   +  D     L 
Sbjct: 1   MSSSQQLSHSAGEVTGQVQLKKEEYLNNVSHAMNQNADH-HTHSQSQLHSEHDQNNPSLI 60

Query: 61  DQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPTNNPTNNPSTRI 110
            QA++ +QQTG QVKN+AQGAA+AVKNTLGM+    S ++      +N P ++I
Sbjct: 61  SQASSVIQQTGGQVKNMAQGAADAVKNTLGMSPATNSPSSPAGTTRSNKPGSKI 113

BLAST of HG10023286 vs. TAIR 10
Match: AT1G52690.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 52.0 bits (123), Expect = 3.5e-07
Identity = 40/114 (35.09%), Postives = 54/114 (47.37%), Query Frame = 0

Query: 1   MASHQDISHKAGEIVGQAQVKKDEIM----------------------NQASHAAHDAKD 60
           MASHQ+ S+KAGE  G+AQ K  E M                       +A   A  AKD
Sbjct: 1   MASHQEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKD 60

Query: 61  KASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTS 93
           K S   Q+  + A + KD+  +++ +TGE +KN A  AAE  K T     + TS
Sbjct: 61  KTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTS 114

BLAST of HG10023286 vs. TAIR 10
Match: AT1G52690.2 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 52.0 bits (123), Expect = 3.5e-07
Identity = 40/114 (35.09%), Postives = 54/114 (47.37%), Query Frame = 0

Query: 1   MASHQDISHKAGEIVGQAQVKKDEIM----------------------NQASHAAHDAKD 60
           MASHQ+ S+KAGE  G+AQ K  E M                       +A   A  AKD
Sbjct: 1   MASHQEQSYKAGETRGKAQEKTGEAMGTMGDKTQAAKDKTQETAQSAQQKAHETAQSAKD 60

Query: 61  KASTHDQSAAQTASDLKDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTS 93
           K S   Q+  + A + KD+  +++ +TGE +KN A  AAE  K T     + TS
Sbjct: 61  KTSQAAQTTQERAQESKDKTGSYMSETGEAIKNKAHDAAEYTKETAEAGKEKTS 114

BLAST of HG10023286 vs. TAIR 10
Match: AT4G13560.1 (Late embryogenesis abundant protein (LEA) family protein )

HSP 1 Score: 51.2 bits (121), Expect = 6.0e-07
Identity = 39/99 (39.39%), Postives = 49/99 (49.49%), Query Frame = 0

Query: 11  AGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDL---------------- 70
           AG+  GQAQ K ++    A   A  A DK +   QSA   A+DL                
Sbjct: 8   AGQNRGQAQEKAEQWTESAKQTAQSACDKTADLTQSARDKAADLTQSARDKTADGSHSAN 67

Query: 71  ------KDQAANFLQQTGEQVKNIAQGAAEAVKNTLGMN 88
                 ++QAA    QTGE VKN+AQGA + VKN+LGMN
Sbjct: 68  KSAQHNQEQAAGLFGQTGESVKNMAQGALDGVKNSLGMN 106

BLAST of HG10023286 vs. TAIR 10
Match: AT1G15415.1 (The protein encoded by this gene was identified as a part of pollen proteome by mass spec analysis. It has weak homology to LEA (late embryo abundant) proteins. Encodes protein phosphatase 2A (PP2A) B'gamma subunit. Targeted to nucleus and cytosol. )

HSP 1 Score: 47.8 bits (112), Expect = 6.7e-06
Identity = 41/108 (37.96%), Postives = 54/108 (50.00%), Query Frame = 0

Query: 1   MASHQD--ISHKAGEIVGQAQVKKDEIMNQASHAAHDAKDKASTHDQSAAQTASDLKDQA 60
           MAS QD   S +AG+IVGQA VK+++  N +                           QA
Sbjct: 1   MASGQDEEFSVRAGQIVGQAHVKENDCNNSS---------------------------QA 60

Query: 61  ANFLQQTGEQVKNIAQGAAEAVKNTLGMNTDNTSNTNNPTNNPTNNPS 107
           + FLQQ GE+VK++A  A+EAVKN LG+N DN     N       NP+
Sbjct: 61  SGFLQQKGEKVKSMAHDASEAVKNKLGINNDNNEEYKNKNPLDKKNPN 81

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038899752.12.0e-4493.58late embryogenesis abundant protein 2-like [Benincasa hispida][more]
XP_023000409.11.9e-3177.48late embryogenesis abundant protein 1 [Cucurbita maxima][more]
XP_023515217.15.6e-3176.58late embryogenesis abundant protein 1-like [Cucurbita pepo subsp. pepo][more]
KAA0058773.11.6e-3073.33late embryogenesis abundant protein 1 [Cucumis melo var. makuwa] >TYK10567.1 lat... [more]
XP_022964497.13.6e-3075.68late embryogenesis abundant protein 1 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
O498173.8e-0639.39Late embryogenesis abundant protein 2 OS=Cicer arietinum OX=3827 PE=2 SV=1[more]
Q962705.0e-0635.09Late embryogenesis abundant protein 7 OS=Arabidopsis thaliana OX=3702 GN=LEA7 PE... [more]
O498166.5e-0637.76Late embryogenesis abundant protein 1 OS=Cicer arietinum OX=3827 PE=2 SV=1[more]
Q9LW127.9e-0435.58Late embryogenesis abundant protein 29 OS=Arabidopsis thaliana OX=3702 GN=LEA29 ... [more]
Match NameE-valueIdentityDescription
A0A6J1KJU59.3e-3277.48late embryogenesis abundant protein 1 OS=Cucurbita maxima OX=3661 GN=LOC11149466... [more]
A0A5D3CF207.9e-3173.33Late embryogenesis abundant protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=... [more]
A0A6J1HHY81.8e-3075.68late embryogenesis abundant protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111464... [more]
A0A1S3CF463.0e-3077.98late embryogenesis abundant protein 1 OS=Cucumis melo OX=3656 GN=LOC103499779 PE... [more]
A0A0A0K8V24.8e-2870.34Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433240 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT1G52680.12.3e-1445.61late embryogenesis abundant protein-related / LEA protein-related [more]
AT1G52690.13.5e-0735.09Late embryogenesis abundant protein (LEA) family protein [more]
AT1G52690.23.5e-0735.09Late embryogenesis abundant protein (LEA) family protein [more]
AT4G13560.16.0e-0739.39Late embryogenesis abundant protein (LEA) family protein [more]
AT1G15415.16.7e-0637.96The protein encoded by this gene was identified as a part of pollen proteome by... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..109
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 43..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..59
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 80..109
NoneNo IPR availablePANTHERPTHR34191:SF9F6D8.10coord: 1..91
IPR039624Stress-induced protein KIN1/KIN2PANTHERPTHR34191LATE EMBRYOGENESIS ABUNDANT PROTEIN (LEA) FAMILY PROTEINcoord: 1..91

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10023286.1HG10023286.1mRNA