HG10023266 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10023266
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Methyl-CpG-binding domain-containing protein 11
Location	Chr05: 32608310 .. 32611102 (-)
RNA-Seq Expression	HG10023266
Synteny	HG10023266

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAAACGAAGTGGCGCTGCAAAACAAGGAACTTCCTCCAAACCCAGTTGAAGGATCTAAAGATGAAGTTTCTGTTCACCTTCCAGCTCCTCCTTCATGGAAGAAACTGGTGTTTCTCACTCTCTTCTCTTTTTAAGCTTGCTGATTCTTTTCATTTGTTTCCCCTCTTGTTTTTATGTTGACTCATTTTCTGGGTCTCTCTAATTTTTGCTTGATTTTCAGTTTTTTTTCCCCATTATATCACTTGTTTTTGGTAAATTTTACTCTGGGTTTTGGTTGTTGCTGAGTTTTAGTTCTAGGGTTTGTCAATGTAATCGCTCTTTGCCTTTGAAGGGCTTTTATGATTAGGGCTTTCCTTATTGAGGAAGTATTTAGCTTACAAATTTTCTGCTTGTGGTGATAGTTTATGTCTTTCTGATACTATTTAATGCTTGAGGAACTACTCTGCTATTTTGCTCTGATACCCTGACAAATTTCAGTGAAATCCAGAGAGATTTAGATGATAAGAAGGCTTTCTCATTCGAAAATTAGTAACTTCTCTGTACATCAGTTTGTAGGATATACTCCTTCAAAGACAGAAGACTAAGGCCCATAATAATTTCATCTTCAGTTCCTTTTTTGGGAAATCTTGTTTTCTTCTCAATTTCTTGCTCTAGTTTTCACCTTCTTTAAAAAAAGAAAATAAAAACATTTGAATTATTAGCCAAATTTCAAAACACAATTATTATTGTTGTTGTTTTTTTCCCCTTTAAAATTTGGCTTGGATTTTAAAAATATTCTTTGAAGGTAGATATCAAAAACCAAAAACCAAAAACAAAATGGTTATCGAATGGAGCCTAAAAACTTAGTAGATTGACAAATGTGTAATTACAATCTGCTAATAAACTCAGAAAAAGAAACTCCGGTACTAGCTAAGGAGCTATCTTAACAAATGAGAGGGGAAATTAAATACTTGGGTCTTTTTCTTCTCTCTCTGTGTCTTTGAATTTATTATTATTATTATCAGCATCATTTTGCTCAAGTAACTTACTGCTTGAAGAACTTGACGAGGGTTATGTTTTTTGAGTCTGAATGATTTTCTAGTTCCCTAATGAAATGCTTTTTCTTTATAATGGTCATTTAATGGAGCATGTGCATTTAACCTCATAATAAAAGACTAACAGATTTAGTTAGGAGAAGGAGGAGAATTGTGTAAAGAATGCTGTAAGCTTGAGTTTGTAACTTAATTACTACTTTGGTATTTTGAAGATGCATAGGAGTGTTATCTGTCAGTATCTTTGGTTCTCTGTCTATCCTCTGCGTCCCAGGGGAGGAGTGATGACAATCATGTTTCAAGCCGTGATTTCAGGTACAAGGTTCAGATGTACATCGAGAAAGAAGTCTGATTATGAAATAAAGAATGAAGATGAGGAATTGATAGTTTCAAACTTAAGCTTTAGCCCATAGATGAATCATAGCATGAGGTCCATATTCTAAAATATTTTTTTGTTTTCTTTCATAGTTTTGCATAGCAATTGTCATACTGTTATATCCCAAATACTGCTTCGAACTAATAATCTTTGAATGATATACTGATACAAAAACAAACCATGCCCTGTCTTTTCGAGCCATCTTTACAAAACTTTTGTTTCTCCAATAGTTGCAACATAAAAGGATTAGACGCGTCCTTTTGTTTTCCCCCTTCTTTGGCTTTTAAGATGACAATTGGGATATTTCATTTTTTATTCTATTCCAGTTTTTACCCAAGAAGGGAGGTGCACCAAGGAAGAATGATATCGTATTTATAGCACCTACTGGCGAGGAGATCAGTAATAGAAAACAGCTCGAGCAGTACTTAAAATCACACCCTGGAGATGTTGCAGTATCAGATTTTGATTGGAGTACAGGTGAGACACCCAGGAGATCTACTAGGATTAGCGAGAAAGCCAAGGCAACTCCACCACAGGAAGAGCCCCCAAGGAAACGAGCGAGAAAATCTCCAGGTTCAAAAAAGAAGGAACACAATGAAACAGAGAAATCTGAGGGTGGAAAGGAAAATGAAATTAAAGATGCTGAAATGTCTGAGAAGGAGAATGCTGAAATTGAGAAAGAAAAGGAGAACTCCAAGGATGAAGAACCTAACAAAGAAGATGAAACAAAAGACAAAGAACTTGAAATGGCCAAAGATGAAGAGCCTAAAGATGAAGATGAAACAAAAGAAAACAAAATTGAAACTGCCAATGATGAAGAGCCTAAAAAAGAAGATGAAACAAAAGGCAGAGAAATTGAAACTACCAAGGCTGAAGAGGCCAAGAAGGAAGATATAGAATCAAAAGAAACTGAACAGAAAAATGCCACAGAGGTGGAAACTTCACAAGATAATAAAGAGGACACTGGCATTGAAAATGTTCCTGGCGATGCAACGGAAACCAAGAACGGCCAGTTAGATACTGAGGATGGCAAAAAAGTAGAAGATCAAAGTCATGAGAATGTTCAAAATCAAGAGGTTGCCACAGCTGGTGAAAAAGTGGCTTTGGAGGTTGGTCAAGGTAAAGGAGAAAACGGGCCACAAACTGAAGCAGAGAAAGCTATTGATTCATGCTGTATGAAACAGGAAAAGGCAGACGTTGGTAATACTAAGGAAAATGGGGTTGCTGAACAAGAGAATTGCAGTGGAACTGAAAGAACACCAGCAGCCGAGGAAACGTTCACAGAAAATGAAGACACACAAAAGCGCGATGGAAAACATGACATCCAGACCGAGAACAGAGGGTACGAAAACGAGAGAGAGGTGACTGCAATTAGTAAGTAA

mRNA sequence

ATGGAAAACGAAGTGGCGCTGCAAAACAAGGAACTTCCTCCAAACCCAGTTGAAGGATCTAAAGATGAAGTTTCTGTTCACCTTCCAGCTCCTCCTTCATGGAAGAAACTGTTTTTACCCAAGAAGGGAGGTGCACCAAGGAAGAATGATATCGTATTTATAGCACCTACTGGCGAGGAGATCAGTAATAGAAAACAGCTCGAGCAGTACTTAAAATCACACCCTGGAGATGTTGCAGTATCAGATTTTGATTGGAGTACAGGTGAGACACCCAGGAGATCTACTAGGATTAGCGAGAAAGCCAAGGCAACTCCACCACAGGAAGAGCCCCCAAGGAAACGAGCGAGAAAATCTCCAGGTTCAAAAAAGAAGGAACACAATGAAACAGAGAAATCTGAGGGTGGAAAGGAAAATGAAATTAAAGATGCTGAAATGTCTGAGAAGGAGAATGCTGAAATTGAGAAAGAAAAGGAGAACTCCAAGGATGAAGAACCTAACAAAGAAGATGAAACAAAAGACAAAGAACTTGAAATGGCCAAAGATGAAGAGCCTAAAGATGAAGATGAAACAAAAGAAAACAAAATTGAAACTGCCAATGATGAAGAGCCTAAAAAAGAAGATGAAACAAAAGGCAGAGAAATTGAAACTACCAAGGCTGAAGAGGCCAAGAAGGAAGATATAGAATCAAAAGAAACTGAACAGAAAAATGCCACAGAGGTGGAAACTTCACAAGATAATAAAGAGGACACTGGCATTGAAAATGTTCCTGGCGATGCAACGGAAACCAAGAACGGCCAGTTAGATACTGAGGATGGCAAAAAAGTAGAAGATCAAAGTCATGAGAATGTTCAAAATCAAGAGGTTGCCACAGCTGGTGAAAAAGTGGCTTTGGAGGTTGGTCAAGGTAAAGGAGAAAACGGGCCACAAACTGAAGCAGAGAAAGCTATTGATTCATGCTGTATGAAACAGGAAAAGGCAGACGTTGGTAATACTAAGGAAAATGGGGTTGCTGAACAAGAGAATTGCAGTGGAACTGAAAGAACACCAGCAGCCGAGGAAACGTTCACAGAAAATGAAGACACACAAAAGCGCGATGGAAAACATGACATCCAGACCGAGAACAGAGGGTACGAAAACGAGAGAGAGGTGACTGCAATTAGTAAGTAA

Coding sequence (CDS)

ATGGAAAACGAAGTGGCGCTGCAAAACAAGGAACTTCCTCCAAACCCAGTTGAAGGATCTAAAGATGAAGTTTCTGTTCACCTTCCAGCTCCTCCTTCATGGAAGAAACTGTTTTTACCCAAGAAGGGAGGTGCACCAAGGAAGAATGATATCGTATTTATAGCACCTACTGGCGAGGAGATCAGTAATAGAAAACAGCTCGAGCAGTACTTAAAATCACACCCTGGAGATGTTGCAGTATCAGATTTTGATTGGAGTACAGGTGAGACACCCAGGAGATCTACTAGGATTAGCGAGAAAGCCAAGGCAACTCCACCACAGGAAGAGCCCCCAAGGAAACGAGCGAGAAAATCTCCAGGTTCAAAAAAGAAGGAACACAATGAAACAGAGAAATCTGAGGGTGGAAAGGAAAATGAAATTAAAGATGCTGAAATGTCTGAGAAGGAGAATGCTGAAATTGAGAAAGAAAAGGAGAACTCCAAGGATGAAGAACCTAACAAAGAAGATGAAACAAAAGACAAAGAACTTGAAATGGCCAAAGATGAAGAGCCTAAAGATGAAGATGAAACAAAAGAAAACAAAATTGAAACTGCCAATGATGAAGAGCCTAAAAAAGAAGATGAAACAAAAGGCAGAGAAATTGAAACTACCAAGGCTGAAGAGGCCAAGAAGGAAGATATAGAATCAAAAGAAACTGAACAGAAAAATGCCACAGAGGTGGAAACTTCACAAGATAATAAAGAGGACACTGGCATTGAAAATGTTCCTGGCGATGCAACGGAAACCAAGAACGGCCAGTTAGATACTGAGGATGGCAAAAAAGTAGAAGATCAAAGTCATGAGAATGTTCAAAATCAAGAGGTTGCCACAGCTGGTGAAAAAGTGGCTTTGGAGGTTGGTCAAGGTAAAGGAGAAAACGGGCCACAAACTGAAGCAGAGAAAGCTATTGATTCATGCTGTATGAAACAGGAAAAGGCAGACGTTGGTAATACTAAGGAAAATGGGGTTGCTGAACAAGAGAATTGCAGTGGAACTGAAAGAACACCAGCAGCCGAGGAAACGTTCACAGAAAATGAAGACACACAAAAGCGCGATGGAAAACATGACATCCAGACCGAGAACAGAGGGTACGAAAACGAGAGAGAGGTGACTGCAATTAGTAAGTAA

Protein sequence

MENEVALQNKELPPNPVEGSKDEVSVHLPAPPSWKKLFLPKKGGAPRKNDIVFIAPTGEEISNRKQLEQYLKSHPGDVAVSDFDWSTGETPRRSTRISEKAKATPPQEEPPRKRARKSPGSKKKEHNETEKSEGGKENEIKDAEMSEKENAEIEKEKENSKDEEPNKEDETKDKELEMAKDEEPKDEDETKENKIETANDEEPKKEDETKGREIETTKAEEAKKEDIESKETEQKNATEVETSQDNKEDTGIENVPGDATETKNGQLDTEDGKKVEDQSHENVQNQEVATAGEKVALEVGQGKGENGPQTEAEKAIDSCCMKQEKADVGNTKENGVAEQENCSGTERTPAAEETFTENEDTQKRDGKHDIQTENRGYENEREVTAISK

Homology

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BLAST of HG10023266 vs. NCBI nr
Match: XP_038897995.1 (methyl-CpG-binding domain-containing protein 11-like [Benincasa hispida])

HSP 1 Score: 566.6 bits (1459), Expect = 1.6e-157
Identity = 327/388 (84.28%), Postives = 346/388 (89.18%), Query Frame = 0


Query: 1   MENEVALQNKELPPNPVEGSKDEVSVHLPAPPSWKKLFLPKKGGAPRKNDIVFIAPTGEE 60
           MEN++ALQNKE   NPVEGSKDE SV LPAPPSWKKLFLPKKGGAPRKNDIVFIAPTGEE
Sbjct: 1   MENQLALQNKEHSQNPVEGSKDEASVQLPAPPSWKKLFLPKKGGAPRKNDIVFIAPTGEE 60

Query: 61  ISNRKQLEQYLKSHPGDVAVSDFDWSTGETPRRSTRISEKAKATPPQEEPPRKRARKSPG 120
           ISN+KQLEQYLKSHPGDVAVSDFDWSTGETPRRSTRISEK KATPPQEEPPRKRARKSPG
Sbjct: 61  ISNKKQLEQYLKSHPGDVAVSDFDWSTGETPRRSTRISEKTKATPPQEEPPRKRARKSPG 120

Query: 121 SKKKEHNETEKSEGGKENEIKDAEMSEKENAEIEKEKENSKDEEPNKEDETKDKELEMAK 180
           SKKKEH+ETEKSEG KE EIK AEMSEKENAE EKEKENSKDEEPNKEDETK KELE AK
Sbjct: 121 SKKKEHSETEKSEGVKETEIKGAEMSEKENAETEKEKENSKDEEPNKEDETKQKELETAK 180

Query: 181 DEEPKDEDETKENKIETANDEEPKKEDETKGREIETTKAEEAKKEDIESKETEQKNATEV 240
           DEEPK+E E +E +IETA +EEP+KEDETK         EEAKKED++SKETEQK  TEV
Sbjct: 181 DEEPKNEGEKEEKEIETAKNEEPRKEDETKD--------EEAKKEDVKSKETEQKTTTEV 240

Query: 241 ETSQDNKEDTGIENVPGDATETKNGQLDTEDGKKVEDQSHENVQNQEVATAGEKVALEVG 300
           ETSQDNKE+TGIENVPGDATETKNGQLDTED +KVED+S+ENVQNQE  TAGEKVALEVG
Sbjct: 241 ETSQDNKENTGIENVPGDATETKNGQLDTEDDEKVEDRSYENVQNQEDVTAGEKVALEVG 300

Query: 301 QGKGENGPQTEAEKAIDSCCMKQEKADVGNTKENGVAEQENCSGTERTPAAEETFTENED 360
           Q KGE GPQTEAEKAIDSCCMKQEKA+VGNTKENGVAEQENCSGTE+TPA+E   TENED
Sbjct: 301 QDKGEKGPQTEAEKAIDSCCMKQEKANVGNTKENGVAEQENCSGTEKTPASEGMVTENED 360

Query: 361 TQKRDGKHDIQTENRGYENEREVTAISK 389
           TQK  GK DIQ E+RG EN  EVTAISK
Sbjct: 361 TQKHGGKRDIQAESRGNENLSEVTAISK 380

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BLAST of HG10023266 vs. NCBI nr
Match: KAA0058753.1 (methyl-CpG-binding domain-containing protein 11 [Cucumis melo var. makuwa] >TYK10547.1 methyl-CpG-binding domain-containing protein 11 [Cucumis melo var. makuwa])

HSP 1 Score: 520.0 bits (1338), Expect = 1.8e-143
Identity = 308/387 (79.59%), Postives = 326/387 (84.24%), Query Frame = 0


Query: 1   MENEVALQNKELPPNPVEGSKDEVSVHLPAPPSWKKLFLPKKGGAPRKNDIVFIAPTGEE 60
           MENEVALQNKE P NP+EGSKDEVS  LPAPPSWKKLF PKKGGAPRKNDIVFIAPTGEE
Sbjct: 1   MENEVALQNKEHPENPLEGSKDEVSFQLPAPPSWKKLFSPKKGGAPRKNDIVFIAPTGEE 60

Query: 61  ISNRKQLEQYLKSHPGDVAVSDFDWSTGETPRRSTRISEKAKATPPQEEPPRKRARKSPG 120
           ISNRKQLEQYLKSHPGD+ +SDFDWSTGETPRRSTRISEKAKATPPQEEPP+KRARKSPG
Sbjct: 61  ISNRKQLEQYLKSHPGDITLSDFDWSTGETPRRSTRISEKAKATPPQEEPPKKRARKSPG 120

Query: 121 SKKKEHNETEKSEGGKENEIKDAEMSEKENAEIEKEKENSKDEEPNKEDETKDKELEMAK 180
           SKKKEHNETEKS+GGKE +IKDAEMSEK+NA  E+E ENSKDEEPNKEDETK KELE AK
Sbjct: 121 SKKKEHNETEKSDGGKECKIKDAEMSEKDNA--ERENENSKDEEPNKEDETKRKELETAK 180

Query: 181 DEEPKDEDETKENKIETANDEEPKKEDETKGREIETTKAEEAKKEDIESKETEQKNATEV 240
            EEPK+EDE  E + ETA DEEPKK DETK REIET+K EEA KEDIESKETEQKN    
Sbjct: 181 GEEPKNEDEKTEKETETAKDEEPKKVDETKDREIETSKDEEANKEDIESKETEQKN---- 240

Query: 241 ETSQDNKEDTGIENVPGDATETKNGQLDTEDGKKVEDQSHENVQNQEVATAGEKVALEVG 300
                             ATETKNGQLDTEDGKKVEDQS ENV NQEVATAGEKV LEVG
Sbjct: 241 ------------------ATETKNGQLDTEDGKKVEDQSRENVPNQEVATAGEKVTLEVG 300

Query: 301 QGKGENGPQTEAEKAIDSCCMKQEKADVGNTKENGVAEQENCSGTERTPAAEETFTENED 360
           Q K ENGP+TEAEKAIDSCCMKQEK ++G TKENGVAEQE C GTER PA+E T TEN+D
Sbjct: 301 QDK-ENGPETEAEKAIDSCCMKQEKPNLGTTKENGVAEQEKCRGTERPPASEGTITENKD 360

Query: 361 TQKRDGKHDIQTENRGYENEREVTAIS 388
           TQK DGKH+IQ ENRG EN  EVTAI+
Sbjct: 361 TQKHDGKHEIQGENRGSENLSEVTAIT 362

[Close]

BLAST of HG10023266 vs. NCBI nr
Match: XP_004135849.1 (methyl-CpG-binding domain-containing protein 11 [Cucumis sativus] >KGN45272.1 hypothetical protein Csa_016120 [Cucumis sativus])

HSP 1 Score: 518.5 bits (1334), Expect = 5.1e-143
Identity = 307/388 (79.12%), Postives = 323/388 (83.25%), Query Frame = 0


Query: 1   MENEVALQNKELPPNPVEGSKDEVSVHLPAPPSWKKLFLPKKGGAPRKNDIVFIAPTGEE 60
           MENEVALQNKE   NP+EGSKDEVS  LPAPPSWKKLF PKKGGAPRKNDIVFIAPTGEE
Sbjct: 1   MENEVALQNKE---NPLEGSKDEVSFQLPAPPSWKKLFSPKKGGAPRKNDIVFIAPTGEE 60

Query: 61  ISNRKQLEQYLKSHPGDVAVSDFDWSTGETPRRSTRISEKAKATPPQEEPPRKRARKSPG 120
           ISNRKQLEQYLKSHPGDVAVSDFDWSTGETPRRSTRISEKAKATPPQEEPP+KRARKSPG
Sbjct: 61  ISNRKQLEQYLKSHPGDVAVSDFDWSTGETPRRSTRISEKAKATPPQEEPPKKRARKSPG 120

Query: 121 SKKKEHNETEKSEGGKENEIKDAEMSEKENAEIEKEKENSKDEEPNKEDETKDKELEMAK 180
           SKKKE NETEKSEG KE+EIKDAEMSEK+N EIEK+ ENSKDEEPNKEDET  KELE AK
Sbjct: 121 SKKKEQNETEKSEGEKESEIKDAEMSEKDNTEIEKDNENSKDEEPNKEDETTQKELETAK 180

Query: 181 DEEPKDEDETKENKIETANDEEPKKEDETKGREIETTKAEEAKKEDIESKETEQKNATEV 240
            EEPK+EDE +E + ET+ DEEPKK DETK REIETTK EEA KED+ESKETEQK     
Sbjct: 181 GEEPKNEDEKEEKETETSKDEEPKKVDETKDREIETTKDEEANKEDVESKETEQK----- 240

Query: 241 ETSQDNKEDTGIENVPGDATETKNGQLDTEDGKKVEDQSHENVQNQEVATAGEKVALEVG 300
                            DATETKNGQLDTEDGKK EDQS ENV NQEV TAGEKV LEVG
Sbjct: 241 -----------------DATETKNGQLDTEDGKKGEDQSRENVPNQEVVTAGEKVTLEVG 300

Query: 301 QGKGENGPQTEAEKAIDSCCMKQEKADVGNTKENGVAEQENCSGTERTPAAEETFTENED 360
           Q K ENGP+TEAEK IDSCCMKQEK  +G +KENGVAEQ NCSGTER PA+E T TENED
Sbjct: 301 QDKEENGPETEAEKPIDSCCMKQEKPTLGTSKENGVAEQGNCSGTERPPASEGTITENED 360

Query: 361 TQKRDGKHDIQTENRGYENEREVTAISK 389
           TQK DGKH +Q ENRG +N  EVTAISK
Sbjct: 361 TQKHDGKHHMQGENRGNKNLSEVTAISK 363

[Close]

BLAST of HG10023266 vs. NCBI nr
Match: XP_016902655.1 (PREDICTED: methyl-CpG-binding domain-containing protein 11, partial [Cucumis melo])

HSP 1 Score: 478.8 bits (1231), Expect = 4.5e-131
Identity = 287/364 (78.85%), Postives = 303/364 (83.24%), Query Frame = 0


Query: 25  SVHLPAPPSWKKLFLPKKGGAPRKNDIVFIAPTGEEISNRKQLEQYLKSHPGDVAVSDFD 84
           S  LPAPPSWKKLF PKKGGAPRKNDIVFIAPTGEEISNRKQLEQYLKSHPGD+ +SDFD
Sbjct: 2   SFQLPAPPSWKKLFSPKKGGAPRKNDIVFIAPTGEEISNRKQLEQYLKSHPGDITLSDFD 61

Query: 85  WSTGETPRRSTRISEKAKATPPQEEPPRKRARKSPGSKKKEHNETEKSEGGKENEIKDAE 144
           WSTGETPRRSTRISEKAKATPPQEEPP+KRARKSPGSKKKEHNETEKS+G KE +IKDAE
Sbjct: 62  WSTGETPRRSTRISEKAKATPPQEEPPKKRARKSPGSKKKEHNETEKSDGEKECKIKDAE 121

Query: 145 MSEKENAEIEKEKENSKDEEPNKEDETKDKELEMAKDEEPKDEDETKENKIETANDEEPK 204
           MSEK+NA  E+E ENSKDEEPNKEDETK KELE AK EEPK+EDE  E + ETA DEEPK
Sbjct: 122 MSEKDNA--ERENENSKDEEPNKEDETKRKELETAKGEEPKNEDEKTEKETETAKDEEPK 181

Query: 205 KEDETKGREIETTKAEEAKKEDIESKETEQKNATEVETSQDNKEDTGIENVPGDATETKN 264
           K DETK REIE +K EEA KEDIESKETEQKN                      ATETKN
Sbjct: 182 KVDETKDREIEASKDEEANKEDIESKETEQKN----------------------ATETKN 241

Query: 265 GQLDTEDGKKVEDQSHENVQNQEVATAGEKVALEVGQGKGENGPQTEAEKAIDSCCMKQE 324
           GQLDTEDGKKVEDQS ENV NQEVATAGEKV LEVGQ K ENGP+TEAEKAIDSCCMKQE
Sbjct: 242 GQLDTEDGKKVEDQSRENVPNQEVATAGEKVTLEVGQDK-ENGPETEAEKAIDSCCMKQE 301

Query: 325 KADVGNTKENGVAEQENCSGTERTPAAEETFTENEDTQKRDGKHDIQTENRGYENEREVT 384
           K ++G TKENGVAEQE C GTER PA+E T TEN+DTQK DGKH+IQ ENRG EN  EVT
Sbjct: 302 KPNLGTTKENGVAEQEKCRGTERPPASEGTITENKDTQKHDGKHEIQGENRGSENLSEVT 340

Query: 385 AISK 389
           AISK
Sbjct: 362 AISK 340

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BLAST of HG10023266 vs. NCBI nr
Match: XP_022152856.1 (methyl-CpG-binding domain-containing protein 11-like [Momordica charantia])

HSP 1 Score: 413.3 bits (1061), Expect = 2.3e-111
Identity = 255/391 (65.22%), Postives = 286/391 (73.15%), Query Frame = 0


Query: 1   MENEVALQNKELPPNPVEGSKDE---VSVHLPAPPSWKKLFLPKKGGAPRKNDIVFIAPT 60
           MENEVA+++KE   NPVEG+ DE    SV LPAPP+WKKLF+P+KGGAP+KN+IVF+APT
Sbjct: 1   MENEVAVESKEPLQNPVEGAPDEAAVASVELPAPPAWKKLFVPRKGGAPKKNEIVFVAPT 60

Query: 61  GEEISNRKQLEQYLKSHPGDVAVSDFDWSTGETPRRSTRISEKAKATPPQEEPPRKRARK 120
           GEEIS RKQLEQYLKSHPG VA+SDFDWSTGETPRRS RISEKAKA PPQEEP RKRAR+
Sbjct: 61  GEEISTRKQLEQYLKSHPGHVAISDFDWSTGETPRRSARISEKAKAXPPQEEPSRKRARR 120

Query: 121 SPGSKKKEHNETEKSEGGKENEIKDAEMSEKENAEIEKEKENSKDEEPNKEDETKDKELE 180
           SPGSKKKEHNE EK  G +E +IKDAEMSEK +AE EKEKE+SKDEEP  EDETK+KE+E
Sbjct: 121 SPGSKKKEHNEMEK--GAEETDIKDAEMSEKVHAETEKEKEDSKDEEPKNEDETKEKEIE 180

Query: 181 MAKDEEPKDEDETKENKIETANDEEPKKEDETKGREIETTKAEEAKKEDIESKETEQKNA 240
            AKD                                      EEAKKED E+KETEQ+N 
Sbjct: 181 TAKD--------------------------------------EEAKKEDEETKETEQRNT 240

Query: 241 TEVETSQDNKEDTGIENVPGDATETKNGQLDTEDGKKVEDQSHENVQNQEVATAGEKVAL 300
           TEVET Q+ KEDT IENVP D T+TKNGQLD EDGK+ EDQSH +VQ +EVAT  E VAL
Sbjct: 241 TEVETFQNRKEDTCIENVPSDKTKTKNGQLDAEDGKEAEDQSHGHVQIREVATVCENVAL 300

Query: 301 EVGQGKGENGPQTEAEKAIDSCCMKQEKADVGNTKENGVAEQENCSGTERTPAAEETFTE 360
           EVGQ KGEN  QTEAEK IDSCCMKQ+K DVGN KEN         GT  TPA+E   TE
Sbjct: 301 EVGQEKGENISQTEAEKDIDSCCMKQDKPDVGNIKEN---------GTGITPASEGAITE 342

Query: 361 NEDTQKRDGKHDIQTENRGYENEREVTAISK 389
           +ED QK +GKHD+Q +NRG  NE EVT   K
Sbjct: 361 HEDAQKHEGKHDVQAKNRGNINENEVTENGK 342

[Close]

BLAST of HG10023266 vs. ExPASy Swiss-Prot
Match: Q9LW00 (Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=MBD11 PE=1 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 3.3e-28
Identity = 114/258 (44.19%), Postives = 159/258 (61.63%), Query Frame = 0


Query: 19  GSKDEVSVHLPAPPSWKKLFLPKKGGAPRKNDIVFIAPTGEEISNRKQLEQYLKSHPGDV 78
           G ++ VSV LPAP SWKKLF P K G+ +K ++VF+APTGEEISNRKQLEQYLKSHPG+ 
Sbjct: 3   GEEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNP 62

Query: 79  AVSDFDWSTGETPRRSTRISEKAKATP-PQEEPPRKRAR-KSPGSKKKEHNETEKSEGGK 138
           A+++FDW+T  TPRRS RISEK KATP P +EPP+KR R KSP SKK    E EKSEGG 
Sbjct: 63  AIAEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDA--EGEKSEGGG 122

Query: 139 E--NEIKDAEMSEKENAEIEKEKENSKDEEPNKEDE-TKDKELEMAKDEEP-----KDED 198
           E  + +KD EM+  E      E EN  D+  + E E   D +  +  +E P     ++E 
Sbjct: 123 EENSHVKDTEMNPPEGI---AENENVTDKNGSGETERVNDAKENIVAEETPNAAPVQEEG 182

Query: 199 ETKENKIETANDEEPKKEDETKGREIETTKAEEAKKEDIESKETEQKNATEVETSQDNKE 258
           E+ + K   + D++ K+ D+ K        + + +K+ +E+  +++K  +E ET   N E
Sbjct: 183 ESMKEKALDSVDDKSKETDKEKDTGSIEKNSVDVEKKTVEA--SDEKKNSEAETR--NHE 242

Query: 259 DTGIENVPGDATETKNGQ 267
           + G+        +T  G+
Sbjct: 243 ENGLTTEAEGKEKTAEGE 251

[Close]

BLAST of HG10023266 vs. ExPASy Swiss-Prot
Match: Q9XI36 (Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=MBD10 PE=1 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.3e-27
Identity = 137/379 (36.15%), Postives = 200/379 (52.77%), Query Frame = 0


Query: 17  VEGSKDEVSVHLPAPPSWKKLFLPKKGGAPRKNDIVFIAPTGEEISNRKQLEQYLKSHPG 76
           +E + + VS+ LPAP SWKKLF PK+ G PRK +IVF+APTGEEIS+RKQLEQYLK+HPG
Sbjct: 1   MENTDELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPG 60

Query: 77  DVAVSDFDWSTGETPRRSTRISEKAKA-TPPQEEPPRKRARKSPGSKKKEHNETEKSEGG 136
           +  +S+F+W+TGETPRRS+RIS+K KA TP  ++ P  + R+S  +KK      EK+E  
Sbjct: 61  NPVISEFEWTTGETPRRSSRISQKVKATTPTPDKEPLLKKRRSSLTKKDNKEAAEKNEEA 120

Query: 137 KENEIKDAEMSEK-ENAEIEKEKENSKDEEPNKEDETKDKELEMAKDEEPKDEDETKENK 196
              E  D +   K ENAE EKEKE        KE  T+  E E       K+ +E ++ +
Sbjct: 121 AVKENMDVDKDGKTENAEAEKEKE--------KEGVTEIAEAE-------KENNEGEKTE 180

Query: 197 IETANDEEPKKEDETKGREIETTKAEEAKKEDIESKETEQKNATEVETSQDNKEDTGIEN 256
            E  N E  K E    G+E +T  AE  K+++ E  E E K   E E  +D KE   ++ 
Sbjct: 181 AEKVNKEGEKTE---AGKEGQTEIAEAEKEKEGEKAEAENK---EAEVVRDKKESMEVDT 240

Query: 257 VPGDATETKNGQLD-TEDGKKVED-QSHENVQNQEVATAGE---KVALEVGQGKGENGPQ 316
                 E K G  +  E+  KVE  +  E  + QEV T  +   K A E  + KG    +
Sbjct: 241 ---SELEKKAGSGEGAEEPSKVEGLKDTEMKEAQEVVTEADVEKKPAEEKTENKGSVTTE 300

Query: 317 TEAEKAIDSCCMKQEKADVGNTKENGVAEQENCSGTERTPAAEETFTENEDTQKRDGKHD 376
              E+ +    + +   D     + G   +E    T    A +E  T+  D +K +   +
Sbjct: 301 ANGEQNV---TLGEPNLDADAEADKGKESKEYDEKTTEAEANKENDTQESDEKKTEAAAN 352

Query: 377 IQTENRGYENEREVTAISK 389
            + E +  + ++   A+++
Sbjct: 361 KENETQESDVKKTEAAVAE 352

[Close]

BLAST of HG10023266 vs. ExPASy TrEMBL
Match: A0A5A7US65 (Methyl-CpG-binding domain-containing protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G002000 PE=4 SV=1)

HSP 1 Score: 520.0 bits (1338), Expect = 8.5e-144
Identity = 308/387 (79.59%), Postives = 326/387 (84.24%), Query Frame = 0


Query: 1   MENEVALQNKELPPNPVEGSKDEVSVHLPAPPSWKKLFLPKKGGAPRKNDIVFIAPTGEE 60
           MENEVALQNKE P NP+EGSKDEVS  LPAPPSWKKLF PKKGGAPRKNDIVFIAPTGEE
Sbjct: 1   MENEVALQNKEHPENPLEGSKDEVSFQLPAPPSWKKLFSPKKGGAPRKNDIVFIAPTGEE 60

Query: 61  ISNRKQLEQYLKSHPGDVAVSDFDWSTGETPRRSTRISEKAKATPPQEEPPRKRARKSPG 120
           ISNRKQLEQYLKSHPGD+ +SDFDWSTGETPRRSTRISEKAKATPPQEEPP+KRARKSPG
Sbjct: 61  ISNRKQLEQYLKSHPGDITLSDFDWSTGETPRRSTRISEKAKATPPQEEPPKKRARKSPG 120

Query: 121 SKKKEHNETEKSEGGKENEIKDAEMSEKENAEIEKEKENSKDEEPNKEDETKDKELEMAK 180
           SKKKEHNETEKS+GGKE +IKDAEMSEK+NA  E+E ENSKDEEPNKEDETK KELE AK
Sbjct: 121 SKKKEHNETEKSDGGKECKIKDAEMSEKDNA--ERENENSKDEEPNKEDETKRKELETAK 180

Query: 181 DEEPKDEDETKENKIETANDEEPKKEDETKGREIETTKAEEAKKEDIESKETEQKNATEV 240
            EEPK+EDE  E + ETA DEEPKK DETK REIET+K EEA KEDIESKETEQKN    
Sbjct: 181 GEEPKNEDEKTEKETETAKDEEPKKVDETKDREIETSKDEEANKEDIESKETEQKN---- 240

Query: 241 ETSQDNKEDTGIENVPGDATETKNGQLDTEDGKKVEDQSHENVQNQEVATAGEKVALEVG 300
                             ATETKNGQLDTEDGKKVEDQS ENV NQEVATAGEKV LEVG
Sbjct: 241 ------------------ATETKNGQLDTEDGKKVEDQSRENVPNQEVATAGEKVTLEVG 300

Query: 301 QGKGENGPQTEAEKAIDSCCMKQEKADVGNTKENGVAEQENCSGTERTPAAEETFTENED 360
           Q K ENGP+TEAEKAIDSCCMKQEK ++G TKENGVAEQE C GTER PA+E T TEN+D
Sbjct: 301 QDK-ENGPETEAEKAIDSCCMKQEKPNLGTTKENGVAEQEKCRGTERPPASEGTITENKD 360

Query: 361 TQKRDGKHDIQTENRGYENEREVTAIS 388
           TQK DGKH+IQ ENRG EN  EVTAI+
Sbjct: 361 TQKHDGKHEIQGENRGSENLSEVTAIT 362

[Close]

BLAST of HG10023266 vs. ExPASy TrEMBL
Match: A0A0A0KA58 (MBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432540 PE=4 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 2.5e-143
Identity = 307/388 (79.12%), Postives = 323/388 (83.25%), Query Frame = 0


Query: 1   MENEVALQNKELPPNPVEGSKDEVSVHLPAPPSWKKLFLPKKGGAPRKNDIVFIAPTGEE 60
           MENEVALQNKE   NP+EGSKDEVS  LPAPPSWKKLF PKKGGAPRKNDIVFIAPTGEE
Sbjct: 1   MENEVALQNKE---NPLEGSKDEVSFQLPAPPSWKKLFSPKKGGAPRKNDIVFIAPTGEE 60

Query: 61  ISNRKQLEQYLKSHPGDVAVSDFDWSTGETPRRSTRISEKAKATPPQEEPPRKRARKSPG 120
           ISNRKQLEQYLKSHPGDVAVSDFDWSTGETPRRSTRISEKAKATPPQEEPP+KRARKSPG
Sbjct: 61  ISNRKQLEQYLKSHPGDVAVSDFDWSTGETPRRSTRISEKAKATPPQEEPPKKRARKSPG 120

Query: 121 SKKKEHNETEKSEGGKENEIKDAEMSEKENAEIEKEKENSKDEEPNKEDETKDKELEMAK 180
           SKKKE NETEKSEG KE+EIKDAEMSEK+N EIEK+ ENSKDEEPNKEDET  KELE AK
Sbjct: 121 SKKKEQNETEKSEGEKESEIKDAEMSEKDNTEIEKDNENSKDEEPNKEDETTQKELETAK 180

Query: 181 DEEPKDEDETKENKIETANDEEPKKEDETKGREIETTKAEEAKKEDIESKETEQKNATEV 240
            EEPK+EDE +E + ET+ DEEPKK DETK REIETTK EEA KED+ESKETEQK     
Sbjct: 181 GEEPKNEDEKEEKETETSKDEEPKKVDETKDREIETTKDEEANKEDVESKETEQK----- 240

Query: 241 ETSQDNKEDTGIENVPGDATETKNGQLDTEDGKKVEDQSHENVQNQEVATAGEKVALEVG 300
                            DATETKNGQLDTEDGKK EDQS ENV NQEV TAGEKV LEVG
Sbjct: 241 -----------------DATETKNGQLDTEDGKKGEDQSRENVPNQEVVTAGEKVTLEVG 300

Query: 301 QGKGENGPQTEAEKAIDSCCMKQEKADVGNTKENGVAEQENCSGTERTPAAEETFTENED 360
           Q K ENGP+TEAEK IDSCCMKQEK  +G +KENGVAEQ NCSGTER PA+E T TENED
Sbjct: 301 QDKEENGPETEAEKPIDSCCMKQEKPTLGTSKENGVAEQGNCSGTERPPASEGTITENED 360

Query: 361 TQKRDGKHDIQTENRGYENEREVTAISK 389
           TQK DGKH +Q ENRG +N  EVTAISK
Sbjct: 361 TQKHDGKHHMQGENRGNKNLSEVTAISK 363

[Close]

BLAST of HG10023266 vs. ExPASy TrEMBL
Match: A0A1S4E3V1 (methyl-CpG-binding domain-containing protein 11 OS=Cucumis melo OX=3656 GN=LOC103500017 PE=4 SV=1)

HSP 1 Score: 478.8 bits (1231), Expect = 2.2e-131
Identity = 287/364 (78.85%), Postives = 303/364 (83.24%), Query Frame = 0


Query: 25  SVHLPAPPSWKKLFLPKKGGAPRKNDIVFIAPTGEEISNRKQLEQYLKSHPGDVAVSDFD 84
           S  LPAPPSWKKLF PKKGGAPRKNDIVFIAPTGEEISNRKQLEQYLKSHPGD+ +SDFD
Sbjct: 2   SFQLPAPPSWKKLFSPKKGGAPRKNDIVFIAPTGEEISNRKQLEQYLKSHPGDITLSDFD 61

Query: 85  WSTGETPRRSTRISEKAKATPPQEEPPRKRARKSPGSKKKEHNETEKSEGGKENEIKDAE 144
           WSTGETPRRSTRISEKAKATPPQEEPP+KRARKSPGSKKKEHNETEKS+G KE +IKDAE
Sbjct: 62  WSTGETPRRSTRISEKAKATPPQEEPPKKRARKSPGSKKKEHNETEKSDGEKECKIKDAE 121

Query: 145 MSEKENAEIEKEKENSKDEEPNKEDETKDKELEMAKDEEPKDEDETKENKIETANDEEPK 204
           MSEK+NA  E+E ENSKDEEPNKEDETK KELE AK EEPK+EDE  E + ETA DEEPK
Sbjct: 122 MSEKDNA--ERENENSKDEEPNKEDETKRKELETAKGEEPKNEDEKTEKETETAKDEEPK 181

Query: 205 KEDETKGREIETTKAEEAKKEDIESKETEQKNATEVETSQDNKEDTGIENVPGDATETKN 264
           K DETK REIE +K EEA KEDIESKETEQKN                      ATETKN
Sbjct: 182 KVDETKDREIEASKDEEANKEDIESKETEQKN----------------------ATETKN 241

Query: 265 GQLDTEDGKKVEDQSHENVQNQEVATAGEKVALEVGQGKGENGPQTEAEKAIDSCCMKQE 324
           GQLDTEDGKKVEDQS ENV NQEVATAGEKV LEVGQ K ENGP+TEAEKAIDSCCMKQE
Sbjct: 242 GQLDTEDGKKVEDQSRENVPNQEVATAGEKVTLEVGQDK-ENGPETEAEKAIDSCCMKQE 301

Query: 325 KADVGNTKENGVAEQENCSGTERTPAAEETFTENEDTQKRDGKHDIQTENRGYENEREVT 384
           K ++G TKENGVAEQE C GTER PA+E T TEN+DTQK DGKH+IQ ENRG EN  EVT
Sbjct: 302 KPNLGTTKENGVAEQEKCRGTERPPASEGTITENKDTQKHDGKHEIQGENRGSENLSEVT 340

Query: 385 AISK 389
           AISK
Sbjct: 362 AISK 340

[Close]

BLAST of HG10023266 vs. ExPASy TrEMBL
Match: A0A6J1DJ04 (methyl-CpG-binding domain-containing protein 11-like OS=Momordica charantia OX=3673 GN=LOC111020477 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 1.1e-111
Identity = 255/391 (65.22%), Postives = 286/391 (73.15%), Query Frame = 0


Query: 1   MENEVALQNKELPPNPVEGSKDE---VSVHLPAPPSWKKLFLPKKGGAPRKNDIVFIAPT 60
           MENEVA+++KE   NPVEG+ DE    SV LPAPP+WKKLF+P+KGGAP+KN+IVF+APT
Sbjct: 1   MENEVAVESKEPLQNPVEGAPDEAAVASVELPAPPAWKKLFVPRKGGAPKKNEIVFVAPT 60

Query: 61  GEEISNRKQLEQYLKSHPGDVAVSDFDWSTGETPRRSTRISEKAKATPPQEEPPRKRARK 120
           GEEIS RKQLEQYLKSHPG VA+SDFDWSTGETPRRS RISEKAKA PPQEEP RKRAR+
Sbjct: 61  GEEISTRKQLEQYLKSHPGHVAISDFDWSTGETPRRSARISEKAKAXPPQEEPSRKRARR 120

Query: 121 SPGSKKKEHNETEKSEGGKENEIKDAEMSEKENAEIEKEKENSKDEEPNKEDETKDKELE 180
           SPGSKKKEHNE EK  G +E +IKDAEMSEK +AE EKEKE+SKDEEP  EDETK+KE+E
Sbjct: 121 SPGSKKKEHNEMEK--GAEETDIKDAEMSEKVHAETEKEKEDSKDEEPKNEDETKEKEIE 180

Query: 181 MAKDEEPKDEDETKENKIETANDEEPKKEDETKGREIETTKAEEAKKEDIESKETEQKNA 240
            AKD                                      EEAKKED E+KETEQ+N 
Sbjct: 181 TAKD--------------------------------------EEAKKEDEETKETEQRNT 240

Query: 241 TEVETSQDNKEDTGIENVPGDATETKNGQLDTEDGKKVEDQSHENVQNQEVATAGEKVAL 300
           TEVET Q+ KEDT IENVP D T+TKNGQLD EDGK+ EDQSH +VQ +EVAT  E VAL
Sbjct: 241 TEVETFQNRKEDTCIENVPSDKTKTKNGQLDAEDGKEAEDQSHGHVQIREVATVCENVAL 300

Query: 301 EVGQGKGENGPQTEAEKAIDSCCMKQEKADVGNTKENGVAEQENCSGTERTPAAEETFTE 360
           EVGQ KGEN  QTEAEK IDSCCMKQ+K DVGN KEN         GT  TPA+E   TE
Sbjct: 301 EVGQEKGENISQTEAEKDIDSCCMKQDKPDVGNIKEN---------GTGITPASEGAITE 342

Query: 361 NEDTQKRDGKHDIQTENRGYENEREVTAISK 389
           +ED QK +GKHD+Q +NRG  NE EVT   K
Sbjct: 361 HEDAQKHEGKHDVQAKNRGNINENEVTENGK 342

[Close]

BLAST of HG10023266 vs. ExPASy TrEMBL
Match: A0A6J1H7R0 (methyl-CpG-binding domain-containing protein 11-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111460918 PE=4 SV=1)

HSP 1 Score: 389.8 bits (1000), Expect = 1.3e-104
Identity = 253/390 (64.87%), Postives = 283/390 (72.56%), Query Frame = 0


Query: 1   MENEVALQNKELPPNPVE-GSKDEVSVHLPAPPSWKKLFLPKKGGAPRKNDIVFIAPTGE 60
           ME+EV +Q+KE   NPVE G+KDEVS HLPAPPSWKKL  PKKGG PRKN+++FIAPTGE
Sbjct: 1   MEDEVGVQSKEELQNPVEGGAKDEVSAHLPAPPSWKKLLSPKKGGTPRKNEVIFIAPTGE 60

Query: 61  EISNRKQLEQYLKSHPGDVAVSDFDWSTGETPRRSTRISEKAKAT-PPQEEPPRKRARKS 120
           EISNRKQLEQYLKSHP DVA+SDFDWSTGETPRRS RISEKAK T PPQE+PPRKRARKS
Sbjct: 61  EISNRKQLEQYLKSHPVDVALSDFDWSTGETPRRSARISEKAKTTPPPQEDPPRKRARKS 120

Query: 121 PGSKKKEHNETEKSEGGKENEIKDAEMSEKENAEIEKEKENSKDEEPNKEDETKDKELEM 180
           PGSKKK   E + SEG KE ++KD EMSEKE+AEI+KE    KD+EP   DETK+KE E 
Sbjct: 121 PGSKKK---EAKNSEGVKETDVKDVEMSEKEHAEIKKE----KDKEPKMVDETKEKETEN 180

Query: 181 AKDEEPKDEDETKENKIETANDEEPKKEDETKGREIETTKAEEAKKEDIESKETEQKNAT 240
           AKDEEP       E  IETA DE+ KKEDETK +EIET K E+A                
Sbjct: 181 AKDEEP-------EKDIETAKDEQAKKEDETKDKEIETAKDEQA---------------- 240

Query: 241 EVETSQDNKEDTGIENVPGDATETKNGQLDTEDGKKVEDQSHENVQNQEVATAGEKVALE 300
             E   + K++ GIENVPG+ T TKNGQLD EDGK+VEDQSH NVQNQEVATA E VAL 
Sbjct: 241 --ENVVETKDEPGIENVPGNTTITKNGQLDAEDGKEVEDQSHGNVQNQEVATAVESVALV 300

Query: 301 VGQGKGENGPQTEAEKAIDSCCMKQEKADVGNTKENGVAEQENCSGTERTPAAEETFTEN 360
            GQ KGEN PQTEAEKA +SCCMKQEKAD  N KENGVA          TPA+E T TEN
Sbjct: 301 GGQDKGENRPQTEAEKANESCCMKQEKADASNIKENGVA---------GTPASEGTITEN 345

Query: 361 EDTQKRDGKHDIQTENRGYENEREVTAISK 389
           +D Q    KHDIQ ++R  + E EV    K
Sbjct: 361 DDAQ----KHDIQAKDRVNKKESEVIETGK 345

[Close]

BLAST of HG10023266 vs. TAIR 10
Match: AT3G15790.1 (methyl-CPG-binding domain 11 )

HSP 1 Score: 127.5 bits (319), Expect = 2.4e-29
Identity = 114/258 (44.19%), Postives = 159/258 (61.63%), Query Frame = 0


Query: 19  GSKDEVSVHLPAPPSWKKLFLPKKGGAPRKNDIVFIAPTGEEISNRKQLEQYLKSHPGDV 78
           G ++ VSV LPAP SWKKLF P K G+ +K ++VF+APTGEEISNRKQLEQYLKSHPG+ 
Sbjct: 3   GEEEVVSVELPAPSSWKKLFYPNKVGSVKKTEVVFVAPTGEEISNRKQLEQYLKSHPGNP 62

Query: 79  AVSDFDWSTGETPRRSTRISEKAKATP-PQEEPPRKRAR-KSPGSKKKEHNETEKSEGGK 138
           A+++FDW+T  TPRRS RISEK KATP P +EPP+KR R KSP SKK    E EKSEGG 
Sbjct: 63  AIAEFDWTTSGTPRRSARISEKTKATPSPDKEPPKKRGRTKSPVSKKDA--EGEKSEGGG 122

Query: 139 E--NEIKDAEMSEKENAEIEKEKENSKDEEPNKEDE-TKDKELEMAKDEEP-----KDED 198
           E  + +KD EM+  E      E EN  D+  + E E   D +  +  +E P     ++E 
Sbjct: 123 EENSHVKDTEMNPPEGI---AENENVTDKNGSGETERVNDAKENIVAEETPNAAPVQEEG 182

Query: 199 ETKENKIETANDEEPKKEDETKGREIETTKAEEAKKEDIESKETEQKNATEVETSQDNKE 258
           E+ + K   + D++ K+ D+ K        + + +K+ +E+  +++K  +E ET   N E
Sbjct: 183 ESMKEKALDSVDDKSKETDKEKDTGSIEKNSVDVEKKTVEA--SDEKKNSEAETR--NHE 242

Query: 259 DTGIENVPGDATETKNGQ 267
           + G+        +T  G+
Sbjct: 243 ENGLTTEAEGKEKTAEGE 251

[Close]

BLAST of HG10023266 vs. TAIR 10
Match: AT1G15340.1 (methyl-CPG-binding domain 10 )

HSP 1 Score: 125.6 bits (314), Expect = 9.0e-29
Identity = 137/379 (36.15%), Postives = 200/379 (52.77%), Query Frame = 0


Query: 17  VEGSKDEVSVHLPAPPSWKKLFLPKKGGAPRKNDIVFIAPTGEEISNRKQLEQYLKSHPG 76
           +E + + VS+ LPAP SWKKLF PK+ G PRK +IVF+APTGEEIS+RKQLEQYLK+HPG
Sbjct: 1   MENTDELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKAHPG 60

Query: 77  DVAVSDFDWSTGETPRRSTRISEKAKA-TPPQEEPPRKRARKSPGSKKKEHNETEKSEGG 136
           +  +S+F+W+TGETPRRS+RIS+K KA TP  ++ P  + R+S  +KK      EK+E  
Sbjct: 61  NPVISEFEWTTGETPRRSSRISQKVKATTPTPDKEPLLKKRRSSLTKKDNKEAAEKNEEA 120

Query: 137 KENEIKDAEMSEK-ENAEIEKEKENSKDEEPNKEDETKDKELEMAKDEEPKDEDETKENK 196
              E  D +   K ENAE EKEKE        KE  T+  E E       K+ +E ++ +
Sbjct: 121 AVKENMDVDKDGKTENAEAEKEKE--------KEGVTEIAEAE-------KENNEGEKTE 180

Query: 197 IETANDEEPKKEDETKGREIETTKAEEAKKEDIESKETEQKNATEVETSQDNKEDTGIEN 256
            E  N E  K E    G+E +T  AE  K+++ E  E E K   E E  +D KE   ++ 
Sbjct: 181 AEKVNKEGEKTE---AGKEGQTEIAEAEKEKEGEKAEAENK---EAEVVRDKKESMEVDT 240

Query: 257 VPGDATETKNGQLD-TEDGKKVED-QSHENVQNQEVATAGE---KVALEVGQGKGENGPQ 316
                 E K G  +  E+  KVE  +  E  + QEV T  +   K A E  + KG    +
Sbjct: 241 ---SELEKKAGSGEGAEEPSKVEGLKDTEMKEAQEVVTEADVEKKPAEEKTENKGSVTTE 300

Query: 317 TEAEKAIDSCCMKQEKADVGNTKENGVAEQENCSGTERTPAAEETFTENEDTQKRDGKHD 376
              E+ +    + +   D     + G   +E    T    A +E  T+  D +K +   +
Sbjct: 301 ANGEQNV---TLGEPNLDADAEADKGKESKEYDEKTTEAEANKENDTQESDEKKTEAAAN 352

Query: 377 IQTENRGYENEREVTAISK 389
            + E +  + ++   A+++
Sbjct: 361 KENETQESDVKKTEAAVAE 352

[Close]

BLAST of HG10023266 vs. TAIR 10
Match: AT1G15340.2 (methyl-CPG-binding domain 10 )

HSP 1 Score: 70.1 bits (170), Expect = 4.5e-12
Identity = 108/325 (33.23%), Postives = 153/325 (47.08%), Query Frame = 0


Query: 17  VEGSKDEVSVHLPAPPSWKKLFLPKKGGAPRKNDIVFIAPTGEEISNRKQLEQYLK---- 76
           +E + + VS+ LPAP SWKKLF PK+ G PRK +IVF+APTGEEIS+RKQLEQYLK    
Sbjct: 1   MENTDELVSIELPAPASWKKLFYPKRAGTPRKTEIVFVAPTGEEISSRKQLEQYLKDNKE 60

Query: 77  -SHPGDVAVSDFDWSTGETPRRSTRISEKAKATPPQEEPPRKRARKSPGSK---KKEHNE 136
            +   + A    +    +  +     +EK K      E        + G K   +K + E
Sbjct: 61  AAEKNEEAAVKENMDVDKDGKTENAEAEKEKEKEGVTEIAEAEKENNEGEKTEAEKVNKE 120

Query: 137 TEKSEGGKENEIKDAEMSEKENAEIEKEKENSKDEEPNKEDE-TKDKELEMAKDEEPKDE 196
            EK+E GKE         + E AE EKEKE  K E  NKE E  +DK+  M  D     E
Sbjct: 121 GEKTEAGKE--------GQTEIAEAEKEKEGEKAEAENKEAEVVRDKKESMEVD---TSE 180

Query: 197 DETKENKIETANDEEPKKEDETKGREIETTKAEEAKKEDIESK----ETEQKNATEVETS 256
            E K    E A  EEP K +  K  E++  + E   + D+E K    +TE K +   E +
Sbjct: 181 LEKKAGSGEGA--EEPSKVEGLKDTEMKEAQ-EVVTEADVEKKPAEEKTENKGSVTTEAN 240

Query: 257 QDNKEDTGIENVPGDATETKNGQLDTEDGKKVEDQSHENVQNQEVATAGEKVALEVGQGK 316
            +     G  N+  DA   K  +    D K  E ++++    QE     ++   E    K
Sbjct: 241 GEQNVTLGEPNLDADAEADKGKESKEYDEKTTEAEANKENDTQE----SDEKKTEAAANK 300

Query: 317 GENGPQTEAEKAIDSCCMKQEKADV 329
            EN  Q    K  ++   +++  D+
Sbjct: 301 -ENETQESDVKKTEAAVAEEKSNDM 306

The following BLAST results are available for this feature:

BLAST of HG10023266 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897995.1	1.6e-157	84.28	methyl-CpG-binding domain-containing protein 11-like [Benincasa hispida]	[more]
KAA0058753.1	1.8e-143	79.59	methyl-CpG-binding domain-containing protein 11 [Cucumis melo var. makuwa] >TYK1...	[more]
XP_004135849.1	5.1e-143	79.12	methyl-CpG-binding domain-containing protein 11 [Cucumis sativus] >KGN45272.1 hy...	[more]
XP_016902655.1	4.5e-131	78.85	PREDICTED: methyl-CpG-binding domain-containing protein 11, partial [Cucumis mel...	[more]
XP_022152856.1	2.3e-111	65.22	methyl-CpG-binding domain-containing protein 11-like [Momordica charantia]	[more]

BLAST of HG10023266 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LW00	3.3e-28	44.19	Methyl-CpG-binding domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9XI36	1.3e-27	36.15	Methyl-CpG-binding domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of HG10023266 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7US65	8.5e-144	79.59	Methyl-CpG-binding domain-containing protein 11 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0KA58	2.5e-143	79.12	MBD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432540 PE=4 SV...	[more]
A0A1S4E3V1	2.2e-131	78.85	methyl-CpG-binding domain-containing protein 11 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A6J1DJ04	1.1e-111	65.22	methyl-CpG-binding domain-containing protein 11-like OS=Momordica charantia OX=3...	[more]
A0A6J1H7R0	1.3e-104	64.87	methyl-CpG-binding domain-containing protein 11-like isoform X4 OS=Cucurbita mos...	[more]

BLAST of HG10023266 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15790.1	2.4e-29	44.19	methyl-CPG-binding domain 11	[more]
AT1G15340.1	9.0e-29	36.15	methyl-CPG-binding domain 10	[more]
AT1G15340.2	4.5e-12	33.23	methyl-CPG-binding domain 10	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 136..170
None	No IPR available	GENE3D	3.30.890.10		coord: 21..95 e-value: 5.8E-9 score: 37.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..281
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 334..351
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 93..254
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 317..331
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 352..382
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..388
None	No IPR available	PANTHER	PTHR33729:SF12	METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 11	coord: 20..263
IPR001739	Methyl-CpG DNA binding	PFAM	PF01429	MBD	coord: 25..90 e-value: 4.6E-12 score: 45.5
IPR001739	Methyl-CpG DNA binding	PROSITE	PS50982	MBD	coord: 20..90 score: 13.573461
IPR039622	Methyl-CpG-binding domain-containing protein 10/11	PANTHER	PTHR33729	METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED	coord: 20..263
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 19..114

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10023266.1	HG10023266.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding