HG10023262 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10023262
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptioncucumber peeling cupredoxin-like
LocationChr05: 32593649 .. 32593840 (-)
RNA-Seq ExpressionHG10023262
SyntenyHG10023262
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGGAGGAGTTGGTTTTGTTTTGGGTTTCATTGCTGCTGTTTTTGTTCACCATGCCACCGCCCAGACGGTGCACGTCGTCGGCAACACCACCGGTTGGACGATTCTGCTCGGTAATACTTTCTATTCCATTCCGATTGGGCTGATAAAAACATCTTTGTCGTTGGCGATTCTCTTGGTAAAAATGTAA

mRNA sequence

ATGGCTGGAGGAGTTGGTTTTGTTTTGGGTTTCATTGCTGCTGTTTTTGTTCACCATGCCACCGCCCAGACGGTGCACGTCGTCGGCAACACCACCGGTTGGACGATTCTGCTCGGTAATACTTTCTATTCCATTCCGATTGGGCTGATAAAAACATCTTTGTCGTTGGCGATTCTCTTGGTAAAAATGTAA

Coding sequence (CDS)

ATGGCTGGAGGAGTTGGTTTTGTTTTGGGTTTCATTGCTGCTGTTTTTGTTCACCATGCCACCGCCCAGACGGTGCACGTCGTCGGCAACACCACCGGTTGGACGATTCTGCTCGGTAATACTTTCTATTCCATTCCGATTGGGCTGATAAAAACATCTTTGTCGTTGGCGATTCTCTTGGTAAAAATGTAA

Protein sequence

MAGGVGFVLGFIAAVFVHHATAQTVHVVGNTTGWTILLGNTFYSIPIGLIKTSLSLAILLVKM
Homology
[Close]
BLAST of HG10023262 vs. NCBI nr
Match: XP_038899950.1 (cucumber peeling cupredoxin-like [Benincasa hispida])

HSP 1 Score: 68.9 bits (167), Expect = 1.7e-08
Identity = 36/44 (81.82%), Postives = 38/44 (86.36%), Query Frame = 0 

Query: 1  MAGGVGFVLGFIAAVFVHHATAQTVHVVGNTTGWTILLGNTFYS 45
          MAGGVGFVLGFIA VFV HATA TVHVVG+T GWT+  GNTFYS
Sbjct: 1  MAGGVGFVLGFIAVVFVQHATA-TVHVVGDTVGWTVPPGNTFYS 43

[Close]
BLAST of HG10023262 vs. NCBI nr
Match: XP_031744996.1 (cucumber peeling cupredoxin-like [Cucumis sativus] >KAE8646439.1 hypothetical protein Csa_015594 [Cucumis sativus])

HSP 1 Score: 68.6 bits (166), Expect = 2.3e-08
Identity = 35/44 (79.55%), Postives = 35/44 (79.55%), Query Frame = 0 

Query: 1  MAGGVGFVLGFIAAVFVHHATAQTVHVVGNTTGWTILLGNTFYS 45
          MAG VGFVLGFIA VFVHHA AQ VHVVG TTGWTI    TFYS
Sbjct: 1  MAGRVGFVLGFIAVVFVHHAAAQKVHVVGETTGWTIPSTETFYS 44

[Close]
BLAST of HG10023262 vs. NCBI nr
Match: TYK10545.1 (cucumber peeling cupredoxin-like [Cucumis melo var. makuwa])

HSP 1 Score: 67.8 bits (164), Expect = 3.9e-08
Identity = 33/44 (75.00%), Postives = 35/44 (79.55%), Query Frame = 0 

Query: 1  MAGGVGFVLGFIAAVFVHHATAQTVHVVGNTTGWTILLGNTFYS 45
          MAGG+GFVL FIA VFVHHA AQ VHVVG+ TGWTI    TFYS
Sbjct: 1  MAGGIGFVLSFIAVVFVHHAAAQKVHVVGDATGWTIPPATTFYS 44

[Close]
BLAST of HG10023262 vs. NCBI nr
Match: XP_008461120.1 (PREDICTED: cucumber peeling cupredoxin-like [Cucumis melo] >KAA0058751.1 cucumber peeling cupredoxin-like [Cucumis melo var. makuwa])

HSP 1 Score: 67.8 bits (164), Expect = 3.9e-08
Identity = 33/44 (75.00%), Postives = 35/44 (79.55%), Query Frame = 0 

Query: 1  MAGGVGFVLGFIAAVFVHHATAQTVHVVGNTTGWTILLGNTFYS 45
          MAGG+GFVL FIA VFVHHA AQ VHVVG+ TGWTI    TFYS
Sbjct: 1  MAGGIGFVLSFIAVVFVHHAAAQKVHVVGDATGWTIPPATTFYS 44

[Close]
BLAST of HG10023262 vs. NCBI nr
Match: XP_008461121.1 (PREDICTED: cucumber peeling cupredoxin-like [Cucumis melo])

HSP 1 Score: 67.4 bits (163), Expect = 5.0e-08
Identity = 33/44 (75.00%), Postives = 36/44 (81.82%), Query Frame = 0 

Query: 1  MAGGVGFVLGFIAAVFVHHATAQTVHVVGNTTGWTILLGNTFYS 45
          MAG VGFVLGFIA VFVHH  AQ VHVVG+TTGWT+   +TFYS
Sbjct: 1  MAGQVGFVLGFIAVVFVHHVAAQKVHVVGDTTGWTVPSTDTFYS 44

[Close]
BLAST of HG10023262 vs. ExPASy TrEMBL
Match: A0A0A0K6Y7 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432500 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-08
Identity = 35/44 (79.55%), Postives = 35/44 (79.55%), Query Frame = 0 

Query: 1  MAGGVGFVLGFIAAVFVHHATAQTVHVVGNTTGWTILLGNTFYS 45
          MAG VGFVLGFIA VFVHHA AQ VHVVG TTGWTI    TFYS
Sbjct: 1  MAGRVGFVLGFIAVVFVHHAAAQKVHVVGETTGWTIPSTETFYS 44

[Close]
BLAST of HG10023262 vs. ExPASy TrEMBL
Match: A0A5A7UZ38 (Cucumber peeling cupredoxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G002230 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.9e-08
Identity = 33/44 (75.00%), Postives = 35/44 (79.55%), Query Frame = 0 

Query: 1  MAGGVGFVLGFIAAVFVHHATAQTVHVVGNTTGWTILLGNTFYS 45
          MAGG+GFVL FIA VFVHHA AQ VHVVG+ TGWTI    TFYS
Sbjct: 1  MAGGIGFVLSFIAVVFVHHAAAQKVHVVGDATGWTIPPATTFYS 44

[Close]
BLAST of HG10023262 vs. ExPASy TrEMBL
Match: A0A5D3CG98 (Cucumber peeling cupredoxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001980 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.9e-08
Identity = 33/44 (75.00%), Postives = 35/44 (79.55%), Query Frame = 0 

Query: 1  MAGGVGFVLGFIAAVFVHHATAQTVHVVGNTTGWTILLGNTFYS 45
          MAGG+GFVL FIA VFVHHA AQ VHVVG+ TGWTI    TFYS
Sbjct: 1  MAGGIGFVLSFIAVVFVHHAAAQKVHVVGDATGWTIPPATTFYS 44

[Close]
BLAST of HG10023262 vs. ExPASy TrEMBL
Match: A0A1S3CDZ6 (cucumber peeling cupredoxin-like OS=Cucumis melo OX=3656 GN=LOC103499801 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.9e-08
Identity = 33/44 (75.00%), Postives = 35/44 (79.55%), Query Frame = 0 

Query: 1  MAGGVGFVLGFIAAVFVHHATAQTVHVVGNTTGWTILLGNTFYS 45
          MAGG+GFVL FIA VFVHHA AQ VHVVG+ TGWTI    TFYS
Sbjct: 1  MAGGIGFVLSFIAVVFVHHAAAQKVHVVGDATGWTIPPATTFYS 44

[Close]
BLAST of HG10023262 vs. ExPASy TrEMBL
Match: A0A5A7UUM3 (Cucumber peeling cupredoxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G002220 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.4e-08
Identity = 33/44 (75.00%), Postives = 36/44 (81.82%), Query Frame = 0 

Query: 1  MAGGVGFVLGFIAAVFVHHATAQTVHVVGNTTGWTILLGNTFYS 45
          MAG VGFVLGFIA VFVHH  AQ VHVVG+TTGWT+   +TFYS
Sbjct: 1  MAGQVGFVLGFIAVVFVHHVAAQKVHVVGDTTGWTVPSTDTFYS 44

The following BLAST results are available for this feature:
BLAST of HG10023262 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038899950.11.7e-0881.82cucumber peeling cupredoxin-like [Benincasa hispida][more]
XP_031744996.12.3e-0879.55cucumber peeling cupredoxin-like [Cucumis sativus] >KAE8646439.1 hypothetical pr... [more]
TYK10545.13.9e-0875.00cucumber peeling cupredoxin-like [Cucumis melo var. makuwa][more]
XP_008461120.13.9e-0875.00PREDICTED: cucumber peeling cupredoxin-like [Cucumis melo] >KAA0058751.1 cucumbe... [more]
XP_008461121.15.0e-0875.00PREDICTED: cucumber peeling cupredoxin-like [Cucumis melo][more]
BLAST of HG10023262 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of HG10023262 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6Y71.1e-0879.55Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G432500... [more]
A0A5A7UZ381.9e-0875.00Cucumber peeling cupredoxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A5D3CG981.9e-0875.00Cucumber peeling cupredoxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A1S3CDZ61.9e-0875.00cucumber peeling cupredoxin-like OS=Cucumis melo OX=3656 GN=LOC103499801 PE=4 SV... [more]
A0A5A7UUM32.4e-0875.00Cucumber peeling cupredoxin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
BLAST of HG10023262 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10023262.1HG10023262.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0022900 electron transport chain
cellular_component GO:0046658 anchored component of plasma membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0009055 electron transfer activity