Homology
BLAST of HG10023242 vs. NCBI nr
Match:
XP_022148556.1 (pentatricopeptide repeat-containing protein At4g02750-like [Momordica charantia])
HSP 1 Score: 561.2 bits (1445), Expect = 8.4e-156
Identity = 341/747 (45.65%), Postives = 365/747 (48.86%), Query Frame = 0
Query: 67 LLRLASFFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFST 126
++ FDRMEERNSVSWM MI+GYVEIGEYREAW +F M R+GARPDQA FVVAFST
Sbjct: 167 VIEARELFDRMEERNSVSWMVMISGYVEIGEYREAWHLFSRMSRSGARPDQAIFVVAFST 226
Query: 127 VTWLDDLELLESLRTMAVKTGYERDVLVGTAVLNVYTRNG-------------------- 186
VTWLD+LELLESLRTMAVKTGYE DVLVGTA LN YT NG
Sbjct: 227 VTWLDNLELLESLRTMAVKTGYESDVLVGTATLNAYTMNGCLEPAYRFFETMPEKNEYSW 286
Query: 187 ------------------------------------------------------------ 246
Sbjct: 287 TTMISAFSQCDRLNDAIALYERTSEKSVAVQTVIITAFAQKGRIQEARNKFEEIVNPNVV 346
Query: 247 ----------------------------------TMIAGLAQNGQSIEALELFAELHRSG 306
MIAGLAQNGQSI+ALELFAELHRSG
Sbjct: 347 AWNAMVAAYAHNGMLDEAKDTFLRMPVRNAVSWAAMIAGLAQNGQSIDALELFAELHRSG 406
Query: 307 TVPNHSSFTSAFFACSNVGFVKV------------------------------------- 366
TVPNHSSFTSA FACSN+GFVKV
Sbjct: 407 TVPNHSSFTSALFACSNIGFVKVGRQIHSLSIKMRCQFNLFVGNGLISMYAKCKGINDAP 466
Query: 367 -------DKDTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDV 426
+KDTVSWN L+SGFVEN MLD+A+K FE MPERDVVSWT IIS YEQT EDV
Sbjct: 467 LLFNTMKNKDTVSWNCLISGFVENCMLDEARKIFEGMPERDVVSWTTIISGYEQTGHEDV 526
Query: 427 AFKLFRDMLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVC----- 479
AF LF DML++GTKPNE TISSLLSACASL TTK GEQIHALTYK+GLNSCLFVC
Sbjct: 527 AFMLFHDMLTVGTKPNESTISSLLSACASLCTTKLGEQIHALTYKLGLNSCLFVCNALIT 586
BLAST of HG10023242 vs. NCBI nr
Match:
XP_023515085.1 (pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 557.8 bits (1436), Expect = 9.3e-155
Identity = 335/740 (45.27%), Postives = 368/740 (49.73%), Query Frame = 0
Query: 74 FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
FDRM ERNSVSWM M++GYVEIGEYREAWRVF MLR+GARPDQATFVVAFSTV+WLD+L
Sbjct: 174 FDRMVERNSVSWMVMMSGYVEIGEYREAWRVFSRMLRSGARPDQATFVVAFSTVSWLDNL 233
Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNGT-------------------------- 193
ELL SLRTMAVK GYE DVLVGT++LN YTR+G+
Sbjct: 234 ELLGSLRTMAVKVGYESDVLVGTSILNAYTRSGSLGPAYQFFEAMPEKNEYSWTTMISAF 293
Query: 194 ------------------------------------------------------------ 253
Sbjct: 294 SQCDKLNDAIALYERTSQKSVAIQTAIITAFAQKGRIQEARNKFEEIVKPNVVAWNAMIA 353
Query: 254 ----------------------------MIAGLAQNGQSIEALELFAELHRSGTVPNHSS 313
MIAGLAQNGQSIEALELF++L RSGTVPNHS+
Sbjct: 354 AYAHNGMLEEAKDTFLRMPVRNAVSWAAMIAGLAQNGQSIEALELFSDLQRSGTVPNHST 413
Query: 314 FTSAFFACSNVGFVKV-------------------------------------------- 373
FTSA FACSN+GFV+V
Sbjct: 414 FTSALFACSNIGFVEVGRQIHALSIKMRCQFNLFVGNGLISMYARCNDINDVVLLFNTMK 473
Query: 374 DKDTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRD 433
KDTVSWN L+SGFVEN MLDDA K FERMPERDVVSWT+IISAYE+ EDVAF LF D
Sbjct: 474 SKDTVSWNSLISGFVENNMLDDAWKAFERMPERDVVSWTSIISAYEKAGLEDVAFGLFHD 533
Query: 434 MLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVC------------ 479
M+S+GT PNE TIS+LLSACASLGTTK GEQIHALTYK+GLNSCL VC
Sbjct: 534 MVSVGTTPNESTISALLSACASLGTTKLGEQIHALTYKLGLNSCLIVCNAVITMHFKCGS 593
BLAST of HG10023242 vs. NCBI nr
Match:
XP_023004730.1 (pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita maxima])
HSP 1 Score: 554.3 bits (1427), Expect = 1.0e-153
Identity = 333/740 (45.00%), Postives = 365/740 (49.32%), Query Frame = 0
Query: 74 FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
FDRM ERNSVSWM M++GYVEIGEYREAWRVF MLR+GARPDQATFVVAFSTV WLD+L
Sbjct: 174 FDRMVERNSVSWMVMMSGYVEIGEYREAWRVFSRMLRSGARPDQATFVVAFSTVAWLDNL 233
Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNGT-------------------------- 193
ELL SLRTMAVK GYE DVLVGT++LN YTRNG+
Sbjct: 234 ELLGSLRTMAVKVGYESDVLVGTSILNAYTRNGSLEPAFQFFEAMPEKNEYSWTTMISAF 293
Query: 194 ------------------------------------------------------------ 253
Sbjct: 294 SQCDKLNDAIALYERTSQESVAIQTAIITAFAHKGRIEEARNKFEEIVKPNVVAWNAMVA 353
Query: 254 ----------------------------MIAGLAQNGQSIEALELFAELHRSGTVPNHSS 313
MIAGLAQNGQSIEALELF++LHRSGTVPNHS+
Sbjct: 354 AYAHNGMLEEAKDTFLRMPVRNAVSWAAMIAGLAQNGQSIEALELFSDLHRSGTVPNHST 413
Query: 314 FTSAFFACSNVGFVKV-------------------------------------------- 373
FTS+ ACSN+GFV+V
Sbjct: 414 FTSSLSACSNIGFVEVGRQIHALSIKMRCQFNLFVGNGLISMYAKCKDIDGVVLLFNTMK 473
Query: 374 DKDTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRD 433
KDTVSWN L+SGFVEN MLDDA K FERMPERDVVSWT+IISAYE+ EDVAF LF D
Sbjct: 474 SKDTVSWNSLISGFVENNMLDDAWKVFERMPERDVVSWTSIISAYEKAGLEDVAFGLFHD 533
Query: 434 MLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVC------------ 479
MLS+GT PNE TIS+LLSACASLGTTK GEQIHALTYK+GLNSCL VC
Sbjct: 534 MLSVGTTPNESTISTLLSACASLGTTKLGEQIHALTYKLGLNSCLIVCNAVITMYFKCGS 593
BLAST of HG10023242 vs. NCBI nr
Match:
KAG7025727.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 551.6 bits (1420), Expect = 6.7e-153
Identity = 334/740 (45.14%), Postives = 363/740 (49.05%), Query Frame = 0
Query: 74 FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
FDRM ERNSVSWM M++GYVEIGEYREAWRVF MLR+GARPDQATFVVAFSTV WLD+L
Sbjct: 250 FDRMVERNSVSWMVMMSGYVEIGEYREAWRVFSRMLRSGARPDQATFVVAFSTVAWLDNL 309
Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNGT-------------------------- 193
LL SLRTMAVK GYE DVLVGT++LN YTRNG+
Sbjct: 310 VLLGSLRTMAVKVGYESDVLVGTSILNAYTRNGSLETAFQFFEAMPEKNEYSWTTMISAF 369
Query: 194 ------------------------------------------------------------ 253
Sbjct: 370 SQCDKLNDAIALYERTSQGSVAIQTAIITAFAQKGRIQEARNKFEEIVKPNVVAWNAMIA 429
Query: 254 ----------------------------MIAGLAQNGQSIEALELFAELHRSGTVPNHSS 313
MIAGLAQNGQSIEALELF++L RSGTVPNHS+
Sbjct: 430 AYAHNGMLEEAKDTFLRMPVRNAVSWAAMIAGLAQNGQSIEALELFSDLQRSGTVPNHST 489
Query: 314 FTSAFFACSNVGFVKV-------------------------------------------- 373
FTSA FACSN+GFV+V
Sbjct: 490 FTSALFACSNIGFVEVGRQIHALSIKMRCQFNLFVGNGLISMYAKCKDINGVVLLFNTMK 549
Query: 374 DKDTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRD 433
KDTVSWN L+SGFVEN MLDDA K FERMPERDVVSWT+IISAY + + EDVAF LF D
Sbjct: 550 SKDTVSWNSLISGFVENNMLDDAWKAFERMPERDVVSWTDIISAYAKARLEDVAFGLFHD 609
Query: 434 MLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVC------------ 479
MLS+GT PNE TIS+LLSACASLGTTK GEQIHALTYK+GLNSCL C
Sbjct: 610 MLSVGTMPNESTISALLSACASLGTTKLGEQIHALTYKLGLNSCLIACNAVITMYFKCGS 669
BLAST of HG10023242 vs. NCBI nr
Match:
KAG6593380.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 548.9 bits (1413), Expect = 4.3e-152
Identity = 333/740 (45.00%), Postives = 362/740 (48.92%), Query Frame = 0
Query: 74 FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
FDRM ERNSVSWM M++GYVEIGEYREAWRVF MLR+GARPDQATFVVAFSTV WLD+L
Sbjct: 174 FDRMVERNSVSWMVMMSGYVEIGEYREAWRVFSRMLRSGARPDQATFVVAFSTVAWLDNL 233
Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNGT-------------------------- 193
LL SLRTMAVK GYE DVLVGT++LN YTRNG+
Sbjct: 234 VLLGSLRTMAVKVGYESDVLVGTSILNAYTRNGSLETAFQFFEAMPEKNEYSWTTMISAF 293
Query: 194 ------------------------------------------------------------ 253
Sbjct: 294 SQCDKLNDAIALYERTSQGSVAIQTAIITAFAQKGRIQEARNKFEEIVKPNVVAWNAMIA 353
Query: 254 ----------------------------MIAGLAQNGQSIEALELFAELHRSGTVPNHSS 313
MIAGLAQNGQSIEALELF++L RSGTVPNHS+
Sbjct: 354 AYAHNGMLEEAKDTFLRMPVRNAVSWAAMIAGLAQNGQSIEALELFSDLQRSGTVPNHST 413
Query: 314 FTSAFFACSNVGFVKV-------------------------------------------- 373
FTSA FACSN+GFV+V
Sbjct: 414 FTSALFACSNIGFVEVGRQIHALSIKMRCQFNLFVGNGLISMYAKCKDINGVVLLFNTMK 473
Query: 374 DKDTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRD 433
KDTVSWN L+SGFVEN MLDDA K FERMPERDVVSWT+IISAY + + EDVAF LF D
Sbjct: 474 SKDTVSWNSLISGFVENNMLDDAWKAFERMPERDVVSWTDIISAYAKARLEDVAFGLFHD 533
Query: 434 MLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVC------------ 479
MLS+GT PNE TIS+LLSACAS GTTK GEQIHALTYK+GLNSCL C
Sbjct: 534 MLSVGTMPNESTISALLSACASPGTTKLGEQIHALTYKLGLNSCLIACNAVITMYFKCGS 593
BLAST of HG10023242 vs. ExPASy Swiss-Prot
Match:
Q9SI53 (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)
HSP 1 Score: 283.5 bits (724), Expect = 4.5e-75
Identity = 170/515 (33.01%), Postives = 251/515 (48.74%), Query Frame = 0
Query: 74 FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
FD+M +RN +SW MI+ Y + +++A + MLR+ RP+ T+ + + D+
Sbjct: 119 FDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV 178
Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNG---------------------TMIAGL 193
+ L +K G E DV V +A+++V+ + G ++I G
Sbjct: 179 RM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGF 238
Query: 194 AQNGQSIEALELFAELHRSGTVPNHSSFTSAFFAC-----------SNVGFVKVDKDTVS 253
AQN +S ALELF + R+G + ++ TS AC ++V VK D+D +
Sbjct: 239 AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLIL 298
Query: 254 WNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRDMLSLGT 313
N LV + + L+DA + F +M ERDV++W+ +IS Q A KLF M S GT
Sbjct: 299 NNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGT 358
Query: 314 KPNELTISSLLSACASLGTTKHGE------------------------------------ 373
KPN +TI +L AC+ G + G
Sbjct: 359 KPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAV 418
Query: 374 --------QIHALTYKVGLNSC-------------------------LFVCL-------- 433
+ A+T++ L +C + L
Sbjct: 419 KLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQ 478
Query: 434 -WEEVSEIRNMMKNKGVAKEPGVSWIQIKCRVHYFLTKDDSHDEIEEIHSCLKVLLKCLT 479
W+ V EIR M+++G+ KEPG SWI++ ++H F+ D+SH +I E+ L L+ LT
Sbjct: 479 KWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLT 538
BLAST of HG10023242 vs. ExPASy Swiss-Prot
Match:
Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)
HSP 1 Score: 269.2 bits (687), Expect = 8.7e-71
Identity = 162/444 (36.49%), Postives = 235/444 (52.93%), Query Frame = 0
Query: 72 SFFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLD 131
+ F +++R+ V+W AMI GY + G Y EA +F M+ G RP+ T S + L
Sbjct: 368 NIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLA 427
Query: 132 DLELLESLRTMAVKTGYERDVLVGTAVLNVYTRNG----------------------TMI 191
L + + AVK+G V V A++ +Y + G +MI
Sbjct: 428 SLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMI 487
Query: 192 AGLAQNGQSIEALELFAELHRSGTVPNHSSFTSAFFACSNVGFVK-----------VDK- 251
LAQ+G + EALELF + G P+H ++ F AC++ G V VDK
Sbjct: 488 IALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKI 547
Query: 252 -DTVS-WNPLVSGFVENYMLDDAQKTFERMP-ERDVVSWTNIISAYEQTKREDVAFKLFR 311
T+S + +V F +L +AQ+ E+MP E DVV+W +++SA K D+ K+
Sbjct: 548 IPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLG-KVAA 607
Query: 312 DMLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVCLWEEVSEIRNM 371
+ L L N S+L + ++ G WEE ++IR
Sbjct: 608 ERLLLLEPENSGAYSALANLYSACGK------------------------WEEAAKIRKS 667
Query: 372 MKNKGVAKEPGVSWIQIKCRVHYFLTKDDSHDEIEEIHSCLKVLLKCLTLAGYVPDTNFV 431
MK+ V KE G SWI++K +VH F +D +H E EI+ +K + + GYVPDT V
Sbjct: 668 MKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASV 727
Query: 432 LHDVEEEQNQDELLYHSEKLAIAYGILHTPNKMPIRIMKNLRICGDCHTFMKFVSQVTQR 479
LHD+EEE + L +HSEKLAIA+G++ TP+K +RIMKNLR+C DCHT +KF+S++ R
Sbjct: 728 LHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGR 786
BLAST of HG10023242 vs. ExPASy Swiss-Prot
Match:
Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)
HSP 1 Score: 258.8 bits (660), Expect = 1.2e-67
Identity = 161/516 (31.20%), Postives = 244/516 (47.29%), Query Frame = 0
Query: 74 FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
F++M +R+ V+W +I+GY + +A F MLR G P++ T
Sbjct: 118 FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177
Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNGTM---------------------IAGL 193
L VK G++ +V VG+A+L++YTR G M IAG
Sbjct: 178 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 237
Query: 194 AQNGQSIEALELFAELHRSGTVPNHSSFTSAFFACSNVGFVKVDKDTVSW---------- 253
A+ + +ALELF + R G P+H S+ S F ACS+ GF++ K ++
Sbjct: 238 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 297
Query: 254 ---NPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRDMLSL 313
N L+ + ++ + DA+K F+R+ +RDVVSW ++++AY Q A F +M +
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357
Query: 314 GTKPNELTISSLLSACASLGTTKHGEQIHALTYKVG------------------------ 373
G +PNE++ S+L+AC+ G G + L K G
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRA 417
Query: 374 -------------------LNSCLF-------------------------VCL------- 433
LN+C V L
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477
Query: 434 --WEEVSEIRNMMKNKGVAKEPGVSWIQIKCRVHYFLTKDDSHDEIEEIHSCLKVLLKCL 479
W + + +R MK GV KEP SW++I+ +H F+ D+ H + EEI + +L +
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKI 537
BLAST of HG10023242 vs. ExPASy Swiss-Prot
Match:
Q9FK93 (Pentatricopeptide repeat-containing protein At5g39680 OS=Arabidopsis thaliana OX=3702 GN=EMB2744 PE=1 SV=1)
HSP 1 Score: 256.5 bits (654), Expect = 5.8e-67
Identity = 146/441 (33.11%), Postives = 229/441 (51.93%), Query Frame = 0
Query: 74 FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
FD +N ++ Y + + EA +F M P++ TF + +++ L L
Sbjct: 295 FDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLL 354
Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNG---------------------TMIAGL 193
+ + L + +K+GY V+VG A++N+Y ++G TMI+G
Sbjct: 355 KQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGC 414
Query: 194 AQNGQSIEALELFAELHRSGTVPNHSSFTSAFFACSNVGFVK--------------VDKD 253
+ +G EALE F + +G +PN +F ACS++GFV+ V D
Sbjct: 415 SHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPD 474
Query: 254 TVSWNPLVSGFVENYMLDDAQKTFERMP-ERDVVSWTNIISAYEQTKREDVAFKLFRDML 313
+ +V + M DA+ P E DVV+W +++A + + K+
Sbjct: 475 IQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAE--Y 534
Query: 314 SLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVCLWEEVSEIRNMMKN 373
++ PN+ + LLS IHA + + WE V+++R++M N
Sbjct: 535 AIEKYPNDSGVYVLLS------------NIHAKSRE-----------WEGVAKVRSLMNN 594
Query: 374 KGVAKEPGVSWIQIKCRVHYFLTKDDSHDEIEEIHSCLKVLLKCLTLAGYVPDTNFVLHD 433
+GV KEPGVSWI I+ + H FL +D+ H EI I++ +K ++ + GY PD HD
Sbjct: 595 RGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHD 654
Query: 434 VEEEQNQDELLYHSEKLAIAYGILHTPNKMPIRIMKNLRICGDCHTFMKFVSQVTQRKII 479
V+EEQ +D L YHSEKLA+AYG++ TP K P+ + KN+RIC DCH+ +K +S++++R I+
Sbjct: 655 VDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIV 710
BLAST of HG10023242 vs. ExPASy Swiss-Prot
Match:
Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)
HSP 1 Score: 249.2 bits (635), Expect = 9.3e-65
Identity = 157/447 (35.12%), Postives = 232/447 (51.90%), Query Frame = 0
Query: 72 SFFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLD 131
+ FD+M +R+ VSW AMIAGY + G EA R+F M R G R ++++F A ST +
Sbjct: 364 NLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVV 423
Query: 132 DLELLESLRTMAVKTGYERDVLVGTAVLNVYTRNG---------------------TMIA 191
LEL + L VK GYE VG A+L +Y + G TMIA
Sbjct: 424 ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIA 483
Query: 192 GLAQNGQSIEALELFAELHRSGTVPNHSSFTSAFFACSNVGFVKVDKD---TVSWNPLVS 251
G +++G AL F + R G P+ ++ + ACS+ G V + T++ + V
Sbjct: 484 GYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVM 543
Query: 252 GFVENY-----------MLDDAQKTFERMP-ERDVVSWTNIISA---YEQTK-REDVAFK 311
++Y +L+DA + MP E D W ++ A + T+ E A K
Sbjct: 544 PNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADK 603
Query: 312 LFRDMLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVCLWEEVSEI 371
+F +P + LLS ++A + + W +V ++
Sbjct: 604 IF------AMEPENSGMYVLLS------------NLYASSGR-----------WGDVGKL 663
Query: 372 RNMMKNKGVAKEPGVSWIQIKCRVHYFLTKDDSHDEIEEIHSCLKVLLKCLTLAGYVPDT 431
R M++KGV K PG SWI+I+ + H F D+ H E +EI + L+ L + AGYV T
Sbjct: 664 RVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKT 723
Query: 432 NFVLHDVEEEQNQDELLYHSEKLAIAYGILHTPNKMPIRIMKNLRICGDCHTFMKFVSQV 479
+ VLHDVEEE+ + + YHSE+LA+AYGI+ + PIR++KNLR+C DCH +K+++++
Sbjct: 724 SVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARI 781
BLAST of HG10023242 vs. ExPASy TrEMBL
Match:
A0A6J1D5R5 (pentatricopeptide repeat-containing protein At4g02750-like OS=Momordica charantia OX=3673 GN=LOC111017187 PE=3 SV=1)
HSP 1 Score: 561.2 bits (1445), Expect = 4.1e-156
Identity = 341/747 (45.65%), Postives = 365/747 (48.86%), Query Frame = 0
Query: 67 LLRLASFFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFST 126
++ FDRMEERNSVSWM MI+GYVEIGEYREAW +F M R+GARPDQA FVVAFST
Sbjct: 167 VIEARELFDRMEERNSVSWMVMISGYVEIGEYREAWHLFSRMSRSGARPDQAIFVVAFST 226
Query: 127 VTWLDDLELLESLRTMAVKTGYERDVLVGTAVLNVYTRNG-------------------- 186
VTWLD+LELLESLRTMAVKTGYE DVLVGTA LN YT NG
Sbjct: 227 VTWLDNLELLESLRTMAVKTGYESDVLVGTATLNAYTMNGCLEPAYRFFETMPEKNEYSW 286
Query: 187 ------------------------------------------------------------ 246
Sbjct: 287 TTMISAFSQCDRLNDAIALYERTSEKSVAVQTVIITAFAQKGRIQEARNKFEEIVNPNVV 346
Query: 247 ----------------------------------TMIAGLAQNGQSIEALELFAELHRSG 306
MIAGLAQNGQSI+ALELFAELHRSG
Sbjct: 347 AWNAMVAAYAHNGMLDEAKDTFLRMPVRNAVSWAAMIAGLAQNGQSIDALELFAELHRSG 406
Query: 307 TVPNHSSFTSAFFACSNVGFVKV------------------------------------- 366
TVPNHSSFTSA FACSN+GFVKV
Sbjct: 407 TVPNHSSFTSALFACSNIGFVKVGRQIHSLSIKMRCQFNLFVGNGLISMYAKCKGINDAP 466
Query: 367 -------DKDTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDV 426
+KDTVSWN L+SGFVEN MLD+A+K FE MPERDVVSWT IIS YEQT EDV
Sbjct: 467 LLFNTMKNKDTVSWNCLISGFVENCMLDEARKIFEGMPERDVVSWTTIISGYEQTGHEDV 526
Query: 427 AFKLFRDMLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVC----- 479
AF LF DML++GTKPNE TISSLLSACASL TTK GEQIHALTYK+GLNSCLFVC
Sbjct: 527 AFMLFHDMLTVGTKPNESTISSLLSACASLCTTKLGEQIHALTYKLGLNSCLFVCNALIT 586
BLAST of HG10023242 vs. ExPASy TrEMBL
Match:
A0A6J1KVF3 (pentatricopeptide repeat-containing protein At4g02750-like OS=Cucurbita maxima OX=3661 GN=LOC111497943 PE=3 SV=1)
HSP 1 Score: 554.3 bits (1427), Expect = 5.0e-154
Identity = 333/740 (45.00%), Postives = 365/740 (49.32%), Query Frame = 0
Query: 74 FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
FDRM ERNSVSWM M++GYVEIGEYREAWRVF MLR+GARPDQATFVVAFSTV WLD+L
Sbjct: 174 FDRMVERNSVSWMVMMSGYVEIGEYREAWRVFSRMLRSGARPDQATFVVAFSTVAWLDNL 233
Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNGT-------------------------- 193
ELL SLRTMAVK GYE DVLVGT++LN YTRNG+
Sbjct: 234 ELLGSLRTMAVKVGYESDVLVGTSILNAYTRNGSLEPAFQFFEAMPEKNEYSWTTMISAF 293
Query: 194 ------------------------------------------------------------ 253
Sbjct: 294 SQCDKLNDAIALYERTSQESVAIQTAIITAFAHKGRIEEARNKFEEIVKPNVVAWNAMVA 353
Query: 254 ----------------------------MIAGLAQNGQSIEALELFAELHRSGTVPNHSS 313
MIAGLAQNGQSIEALELF++LHRSGTVPNHS+
Sbjct: 354 AYAHNGMLEEAKDTFLRMPVRNAVSWAAMIAGLAQNGQSIEALELFSDLHRSGTVPNHST 413
Query: 314 FTSAFFACSNVGFVKV-------------------------------------------- 373
FTS+ ACSN+GFV+V
Sbjct: 414 FTSSLSACSNIGFVEVGRQIHALSIKMRCQFNLFVGNGLISMYAKCKDIDGVVLLFNTMK 473
Query: 374 DKDTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRD 433
KDTVSWN L+SGFVEN MLDDA K FERMPERDVVSWT+IISAYE+ EDVAF LF D
Sbjct: 474 SKDTVSWNSLISGFVENNMLDDAWKVFERMPERDVVSWTSIISAYEKAGLEDVAFGLFHD 533
Query: 434 MLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVC------------ 479
MLS+GT PNE TIS+LLSACASLGTTK GEQIHALTYK+GLNSCL VC
Sbjct: 534 MLSVGTTPNESTISTLLSACASLGTTKLGEQIHALTYKLGLNSCLIVCNAVITMYFKCGS 593
BLAST of HG10023242 vs. ExPASy TrEMBL
Match:
A0A6J1HAB1 (pentatricopeptide repeat-containing protein At4g02750-like OS=Cucurbita moschata OX=3662 GN=LOC111461023 PE=3 SV=1)
HSP 1 Score: 539.7 bits (1389), Expect = 1.3e-149
Identity = 328/740 (44.32%), Postives = 361/740 (48.78%), Query Frame = 0
Query: 74 FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
FDRM ERNSVSWM M++GYV I EYREAWRVF MLR+GARPDQATFVVAFSTV WLD+L
Sbjct: 174 FDRMVERNSVSWMVMMSGYVGICEYREAWRVFSRMLRSGARPDQATFVVAFSTVAWLDNL 233
Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNGTM------------------------- 193
ELL +LRTMAVK GYE DVLVGT++LN YTR+G++
Sbjct: 234 ELLGNLRTMAVKVGYESDVLVGTSILNAYTRSGSLGPAYQFFEAMPEKNEYSWTTMISAF 293
Query: 194 ------------------------------------------------------------ 253
Sbjct: 294 SQCDKLNDAIALYERTSQKSVAIQTAIITAFAQKGRIQEARNKFEEIVKPNVVAWNAMIA 353
Query: 254 -----------------------------IAGLAQNGQSIEALELFAELHRSGTVPNHSS 313
IAGLAQNGQSIEALELF++L RSGTVPNHS+
Sbjct: 354 AYAHNGMLEEAKDTFLRMPVRNAVSWAAIIAGLAQNGQSIEALELFSDLQRSGTVPNHST 413
Query: 314 FTSAFFACSNVGFVKV-------------------------------------------- 373
FTSA FACSN+GFV+V
Sbjct: 414 FTSALFACSNIGFVEVGRQIHALSIKMRCQFNLFVGNGLISMYAKCKDINDVVLLFNTMK 473
Query: 374 DKDTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRD 433
KDTVSWN L+SGFVEN MLDDA K FERMPERDVVSWT+IISAYE+ EDVAF LF D
Sbjct: 474 SKDTVSWNSLISGFVENNMLDDAWKAFERMPERDVVSWTSIISAYEKAGLEDVAFGLFHD 533
Query: 434 MLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVC------------ 479
M+S+GT PNE TIS+LLSACASLGTTK GEQIHA TYK+GLNSCL VC
Sbjct: 534 MVSVGTTPNESTISALLSACASLGTTKLGEQIHASTYKLGLNSCLIVCNAVITMYFKCGS 593
BLAST of HG10023242 vs. ExPASy TrEMBL
Match:
A0A2N9IF76 (DYW_deaminase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50980 PE=3 SV=1)
HSP 1 Score: 452.2 bits (1162), Expect = 2.7e-123
Identity = 281/740 (37.97%), Postives = 331/740 (44.73%), Query Frame = 0
Query: 75 DRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLE 134
++M ERN VSWM MI+G++EI EY EAW VF M+R+G RPDQA VVA S V L+DLE
Sbjct: 127 EKMGERNLVSWMVMISGFIEISEYGEAWGVFLMMMRSGVRPDQAVLVVALSAVMRLNDLE 186
Query: 135 LLESLRTMAVKTGYERDVLVGTAVLNVYTRNGT--------------------------- 194
L+ESLRT+A+KTGYE DV+VGTA+L+ YTRNG+
Sbjct: 187 LVESLRTLAIKTGYEGDVVVGTAILDAYTRNGSLDYAVKFFEMMPIRNEYSWTTMIAAFA 246
Query: 195 ------------------------------------------------------------ 254
Sbjct: 247 QCHRLDDAIAFYERDPVKSVATRATIITAYAQMGRIYEARCIFDETPNPNVVMWNAMVAA 306
Query: 255 ---------------------------MIAGLAQNGQSIEALELFAELHRSGTVPNHSSF 314
MI+G QNG S EALE+FAELHRSG P+HSSF
Sbjct: 307 YAQNGMLEEAKDIFLHIPMRNTASWAAMISGFVQNGHSREALEVFAELHRSGNFPSHSSF 366
Query: 315 TSAFFACSNVGFVKVD-------------------------------------------- 374
TSA FACSN+G V+V
Sbjct: 367 TSALFACSNIGDVEVGRQIHSLTIKTKCQFNSFVGNGLISMYGKCKSIEDFSQVFSTMRV 426
Query: 375 KDTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRDM 434
KD VSWN L+S ENYMLDDA K FE+MP RDVVSWT +ISAYEQ + D+AFKLF DM
Sbjct: 427 KDVVSWNSLISRLSENYMLDDAWKFFEKMPNRDVVSWTAVISAYEQAGQGDIAFKLFLDM 486
Query: 435 LSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVC------------- 479
L+ G +PN+LT++SLLSACA LG K GEQIH+L YK+G NSCL VC
Sbjct: 487 LARGMRPNQLTVTSLLSACACLGAAKLGEQIHSLIYKLGFNSCLSVCNALITMYFKCGSL 546
BLAST of HG10023242 vs. ExPASy TrEMBL
Match:
A0A2I4GQC2 (pentatricopeptide repeat-containing protein At4g02750-like OS=Juglans regia OX=51240 GN=LOC109009890 PE=3 SV=1)
HSP 1 Score: 431.4 bits (1108), Expect = 4.9e-117
Identity = 269/741 (36.30%), Postives = 327/741 (44.13%), Query Frame = 0
Query: 74 FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
F++M ERN VSW+ MI+G+ EI ++REAW +F M+R+G RPDQ+ VVA S + L+DL
Sbjct: 170 FEKMVERNLVSWLVMISGFSEISKHREAWTIFLMMVRSGVRPDQSVLVVALSAINGLNDL 229
Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNGT-------------------------- 193
E+LES RT+A+KTGYERDV+VGT++L+ YTRNG+
Sbjct: 230 EMLESFRTVAIKTGYERDVVVGTSILDAYTRNGSLDNALKFFETMPKRNDYSWTTMIAAF 289
Query: 194 ------------------------------------------------------------ 253
Sbjct: 290 AQCHRFENAIAFYERDPIKSVATRATIITAYAQKERMYEARRIFDEISNPSVVMWNAMVA 349
Query: 254 ----------------------------MIAGLAQNGQSIEALELFAELHRSGTVPNHSS 313
MI+G QNGQS EALELFAE HRSG VPNHSS
Sbjct: 350 GYAQNGMLEEAKDIFLHIPERSAASWAAMISGFVQNGQSREALELFAEFHRSGNVPNHSS 409
Query: 314 FTSAFFACSNVGFVKVDK------------------------------------------ 373
FT+A FAC+N+G ++ K
Sbjct: 410 FTTALFACTNIGDFEMGKQIHSLTIKTRCQFNSFVGNGLISMYGKYKNIEDVSQVFSTMR 469
Query: 374 --DTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRD 433
D VSWN L+S EN+MLDDA+KTFE+MP+RD VSWT IISAYEQ DVAF LF D
Sbjct: 470 VRDIVSWNSLISRLSENFMLDDARKTFEKMPKRDAVSWTAIISAYEQAGHGDVAFALFLD 529
Query: 434 MLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCL--------------- 479
ML+ G PN+LTI+SLLSACAS+G +K G+QIHALT+K+G+NS L
Sbjct: 530 MLTRGISPNQLTITSLLSACASIGVSKPGQQIHALTHKLGINSSLSVSNALITMYFRCGS 589
BLAST of HG10023242 vs. TAIR 10
Match:
AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 283.5 bits (724), Expect = 3.2e-76
Identity = 170/515 (33.01%), Postives = 251/515 (48.74%), Query Frame = 0
Query: 74 FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
FD+M +RN +SW MI+ Y + +++A + MLR+ RP+ T+ + + D+
Sbjct: 119 FDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV 178
Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNG---------------------TMIAGL 193
+ L +K G E DV V +A+++V+ + G ++I G
Sbjct: 179 RM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGF 238
Query: 194 AQNGQSIEALELFAELHRSGTVPNHSSFTSAFFAC-----------SNVGFVKVDKDTVS 253
AQN +S ALELF + R+G + ++ TS AC ++V VK D+D +
Sbjct: 239 AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLIL 298
Query: 254 WNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRDMLSLGT 313
N LV + + L+DA + F +M ERDV++W+ +IS Q A KLF M S GT
Sbjct: 299 NNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGT 358
Query: 314 KPNELTISSLLSACASLGTTKHGE------------------------------------ 373
KPN +TI +L AC+ G + G
Sbjct: 359 KPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAV 418
Query: 374 --------QIHALTYKVGLNSC-------------------------LFVCL-------- 433
+ A+T++ L +C + L
Sbjct: 419 KLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQ 478
Query: 434 -WEEVSEIRNMMKNKGVAKEPGVSWIQIKCRVHYFLTKDDSHDEIEEIHSCLKVLLKCLT 479
W+ V EIR M+++G+ KEPG SWI++ ++H F+ D+SH +I E+ L L+ LT
Sbjct: 479 KWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLT 538
BLAST of HG10023242 vs. TAIR 10
Match:
AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )
HSP 1 Score: 269.2 bits (687), Expect = 6.2e-72
Identity = 162/444 (36.49%), Postives = 235/444 (52.93%), Query Frame = 0
Query: 72 SFFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLD 131
+ F +++R+ V+W AMI GY + G Y EA +F M+ G RP+ T S + L
Sbjct: 368 NIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLA 427
Query: 132 DLELLESLRTMAVKTGYERDVLVGTAVLNVYTRNG----------------------TMI 191
L + + AVK+G V V A++ +Y + G +MI
Sbjct: 428 SLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMI 487
Query: 192 AGLAQNGQSIEALELFAELHRSGTVPNHSSFTSAFFACSNVGFVK-----------VDK- 251
LAQ+G + EALELF + G P+H ++ F AC++ G V VDK
Sbjct: 488 IALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKI 547
Query: 252 -DTVS-WNPLVSGFVENYMLDDAQKTFERMP-ERDVVSWTNIISAYEQTKREDVAFKLFR 311
T+S + +V F +L +AQ+ E+MP E DVV+W +++SA K D+ K+
Sbjct: 548 IPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLG-KVAA 607
Query: 312 DMLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVCLWEEVSEIRNM 371
+ L L N S+L + ++ G WEE ++IR
Sbjct: 608 ERLLLLEPENSGAYSALANLYSACGK------------------------WEEAAKIRKS 667
Query: 372 MKNKGVAKEPGVSWIQIKCRVHYFLTKDDSHDEIEEIHSCLKVLLKCLTLAGYVPDTNFV 431
MK+ V KE G SWI++K +VH F +D +H E EI+ +K + + GYVPDT V
Sbjct: 668 MKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASV 727
Query: 432 LHDVEEEQNQDELLYHSEKLAIAYGILHTPNKMPIRIMKNLRICGDCHTFMKFVSQVTQR 479
LHD+EEE + L +HSEKLAIA+G++ TP+K +RIMKNLR+C DCHT +KF+S++ R
Sbjct: 728 LHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGR 786
BLAST of HG10023242 vs. TAIR 10
Match:
AT5G39680.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 256.5 bits (654), Expect = 4.1e-68
Identity = 146/441 (33.11%), Postives = 229/441 (51.93%), Query Frame = 0
Query: 74 FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
FD +N ++ Y + + EA +F M P++ TF + +++ L L
Sbjct: 295 FDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLL 354
Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNG---------------------TMIAGL 193
+ + L + +K+GY V+VG A++N+Y ++G TMI+G
Sbjct: 355 KQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGC 414
Query: 194 AQNGQSIEALELFAELHRSGTVPNHSSFTSAFFACSNVGFVK--------------VDKD 253
+ +G EALE F + +G +PN +F ACS++GFV+ V D
Sbjct: 415 SHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPD 474
Query: 254 TVSWNPLVSGFVENYMLDDAQKTFERMP-ERDVVSWTNIISAYEQTKREDVAFKLFRDML 313
+ +V + M DA+ P E DVV+W +++A + + K+
Sbjct: 475 IQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAE--Y 534
Query: 314 SLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVCLWEEVSEIRNMMKN 373
++ PN+ + LLS IHA + + WE V+++R++M N
Sbjct: 535 AIEKYPNDSGVYVLLS------------NIHAKSRE-----------WEGVAKVRSLMNN 594
Query: 374 KGVAKEPGVSWIQIKCRVHYFLTKDDSHDEIEEIHSCLKVLLKCLTLAGYVPDTNFVLHD 433
+GV KEPGVSWI I+ + H FL +D+ H EI I++ +K ++ + GY PD HD
Sbjct: 595 RGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHD 654
Query: 434 VEEEQNQDELLYHSEKLAIAYGILHTPNKMPIRIMKNLRICGDCHTFMKFVSQVTQRKII 479
V+EEQ +D L YHSEKLA+AYG++ TP K P+ + KN+RIC DCH+ +K +S++++R I+
Sbjct: 655 VDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIV 710
BLAST of HG10023242 vs. TAIR 10
Match:
AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 249.2 bits (635), Expect = 6.6e-66
Identity = 157/447 (35.12%), Postives = 232/447 (51.90%), Query Frame = 0
Query: 72 SFFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLD 131
+ FD+M +R+ VSW AMIAGY + G EA R+F M R G R ++++F A ST +
Sbjct: 364 NLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVV 423
Query: 132 DLELLESLRTMAVKTGYERDVLVGTAVLNVYTRNG---------------------TMIA 191
LEL + L VK GYE VG A+L +Y + G TMIA
Sbjct: 424 ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIA 483
Query: 192 GLAQNGQSIEALELFAELHRSGTVPNHSSFTSAFFACSNVGFVKVDKD---TVSWNPLVS 251
G +++G AL F + R G P+ ++ + ACS+ G V + T++ + V
Sbjct: 484 GYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVM 543
Query: 252 GFVENY-----------MLDDAQKTFERMP-ERDVVSWTNIISA---YEQTK-REDVAFK 311
++Y +L+DA + MP E D W ++ A + T+ E A K
Sbjct: 544 PNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADK 603
Query: 312 LFRDMLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVCLWEEVSEI 371
+F +P + LLS ++A + + W +V ++
Sbjct: 604 IF------AMEPENSGMYVLLS------------NLYASSGR-----------WGDVGKL 663
Query: 372 RNMMKNKGVAKEPGVSWIQIKCRVHYFLTKDDSHDEIEEIHSCLKVLLKCLTLAGYVPDT 431
R M++KGV K PG SWI+I+ + H F D+ H E +EI + L+ L + AGYV T
Sbjct: 664 RVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKT 723
Query: 432 NFVLHDVEEEQNQDELLYHSEKLAIAYGILHTPNKMPIRIMKNLRICGDCHTFMKFVSQV 479
+ VLHDVEEE+ + + YHSE+LA+AYGI+ + PIR++KNLR+C DCH +K+++++
Sbjct: 724 SVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARI 781
BLAST of HG10023242 vs. TAIR 10
Match:
AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 248.8 bits (634), Expect = 8.6e-66
Identity = 154/543 (28.36%), Postives = 248/543 (45.67%), Query Frame = 0
Query: 48 SKSAVRCFSWEECIVILEWLLRLASFFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFW 107
S + + +S C+ E L +F + V+W AM+AGY + + + ++F
Sbjct: 455 STALIDAYSRNRCMKEAEILFERHNF-------DLVAWNAMMAGYTQSHDGHKTLKLFAL 514
Query: 108 MLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLNVYTRNG- 167
M + G R D T F T +L + + + A+K+GY+ D+ V + +L++Y + G
Sbjct: 515 MHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGD 574
Query: 168 --------------------TMIAGLAQNGQSIEALELFAELHRSGTVPNHSSFTSAFFA 227
TMI+G +NG+ A +F+++ G +P+ + + A
Sbjct: 575 MSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKA 634
Query: 228 CS-------------NVGFVKVDKDTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSW 287
S N + D LV + + +DDA F+R+ ++ +W
Sbjct: 635 SSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAW 694
Query: 288 TNIISAYEQTKREDVAFKLFRDMLSLGTKPNELTISSLLSACASLGTT----KHGEQIH- 347
++ Q +LF+ M SLG KP+++T +LSAC+ G KH +H
Sbjct: 695 NAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHG 754
Query: 348 ---------------------------------------ALTYKVGLNSC---------- 407
A Y+ L +C
Sbjct: 755 DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGK 814
Query: 408 ---------------LFVCL---------WEEVSEIRNMMKNKGVAKEPGVSWIQIKCRV 467
+V L W+E+ R MMK V K+PG SWI++K ++
Sbjct: 815 RVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKI 874
Query: 468 HYFLTKDDSHDEIEEIHSCLKVLLKCLTLAGYVPDTNFVLHDVEEEQNQDELLYHSEKLA 479
H F+ D S+ + E I+ +K +++ + GYVP+T+F L DVEEE+ + L YHSEKLA
Sbjct: 875 HIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLA 934
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022148556.1 | 8.4e-156 | 45.65 | pentatricopeptide repeat-containing protein At4g02750-like [Momordica charantia] | [more] |
XP_023515085.1 | 9.3e-155 | 45.27 | pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita pepo subsp... | [more] |
XP_023004730.1 | 1.0e-153 | 45.00 | pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita maxima] | [more] |
KAG7025727.1 | 6.7e-153 | 45.14 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
KAG6593380.1 | 4.3e-152 | 45.00 | Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... | [more] |
Match Name | E-value | Identity | Description | |
Q9SI53 | 4.5e-75 | 33.01 | Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop... | [more] |
Q9SHZ8 | 8.7e-71 | 36.49 | Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... | [more] |
Q9LIQ7 | 1.2e-67 | 31.20 | Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop... | [more] |
Q9FK93 | 5.8e-67 | 33.11 | Pentatricopeptide repeat-containing protein At5g39680 OS=Arabidopsis thaliana OX... | [more] |
Q9SY02 | 9.3e-65 | 35.12 | Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1D5R5 | 4.1e-156 | 45.65 | pentatricopeptide repeat-containing protein At4g02750-like OS=Momordica charanti... | [more] |
A0A6J1KVF3 | 5.0e-154 | 45.00 | pentatricopeptide repeat-containing protein At4g02750-like OS=Cucurbita maxima O... | [more] |
A0A6J1HAB1 | 1.3e-149 | 44.32 | pentatricopeptide repeat-containing protein At4g02750-like OS=Cucurbita moschata... | [more] |
A0A2N9IF76 | 2.7e-123 | 37.97 | DYW_deaminase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS... | [more] |
A0A2I4GQC2 | 4.9e-117 | 36.30 | pentatricopeptide repeat-containing protein At4g02750-like OS=Juglans regia OX=5... | [more] |
Match Name | E-value | Identity | Description | |
AT2G03880.1 | 3.2e-76 | 33.01 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT2G22070.1 | 6.2e-72 | 36.49 | pentatricopeptide (PPR) repeat-containing protein | [more] |
AT5G39680.1 | 4.1e-68 | 33.11 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G02750.1 | 6.6e-66 | 35.12 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G33170.1 | 8.6e-66 | 28.36 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |