HG10023242 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10023242
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr05: 32455240 .. 32457880 (+)
RNA-Seq ExpressionHG10023242
SyntenyHG10023242
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAACAAAACGATCCTTCAACTCACCAAACTCGGCCGACTCACCGAAGCCCGAGACGTCTTCGACTCAATGTCTCAACGAGATTCAGTCTCCTGGAACTCGATGATTTCTGGGTATGCCTAGAACGGACTTTTACGCAGAGCAAAAGTGCTGTTCGATGCTTTTCGTGGGAAGAATGTGAGAACTTGGACGATTTTACTAGCGGGGTATGCGAGACATGGGCTTATACATGAGGCTCGGACTGTTTTTGAGTCGATGCCGGAGCGGAATGTAGTTTCTTGGAATACAATGATTGGTGGGTATGTACGAATTGGTGACTTGAGGACTGGGCGGAAGCTGTTCGACGAAATGCCCGAGAAGAATGTTGTATCGTGGAATCTGATTGTTACTAGGTATTGTCATTCTCGAATGGTTGTTGAGGCTCGCGAGCTTTTTTGATCGGATGGAGGAGCGGAATTCTGTATCGTGGATGGCTATGATAGCTGGGTATGTTGAGATTGGTGAGTATCGAGAAGCTTGGCGTGTGTTTTTTTGGATGTTGAGGAATGGAGCGAGGCCTGATCAGGCTACATTTGTGGTTGCTTTCTCAACGGTTACTTGGTTGGATGATTTGGAGTTGCTTGAGAGTTTGAGAACAATGGCTGTAAAGACTGGTTATGAGAGGGATGTTCTTGTGGGGACAGCAGTTCTTAATGTGTATACGAGGAATGGAAGTTTAGACCCTACATTTCGTTTTTTTTAGACAATGCCGGAGAAGAATGAATATTCATGGACTTCTATGATCTCAGCTTTCTCTCAGTGTAATAGATTAAACGACGCCATTGCATTGTATGAGAGAACTTCTCAGAAAAGTGTTGCTATTCAAACTGTGCTTGTTACTGCCTTTGCTCACAAGGGAATGATTGATGATGCCAGGAATATGTTTGAGGAGATTGTGAATCCCAATGTAGTTGTTTGGAATGCTATGATTGCTGCATATGCGCACAATGGAATGCTTGAACAAGCAAAGCTTTTTTGAGAATGCCTGTGCCGAATGCTATTTCCTGGGCAGCCATGATCGCTGGACTTGCACAAAATGGTCAAAGCATTGAAGCTTTGGAGTTGTTTGCTGAACTCCATAGATCAGGAACTGTACCAAATCATTCAAGCTTCACTAGTGCCTTCTTTGCTTGTTCAAATGTTGGATTTGTAAAGGTTGGTAGGTAGATCCACTCTCTCTCCATCAAAATGAGGTGTCAGTTTAATTTATTTGTGGGAAATGGATTAATCTCAATGTATGCAAAATGTAAGAGCATAAATGATGTTTCTCTGTTATTTAACACGATGAAAGATAAAGATACTGTATCTTGGAACCCCCTTGTCAGTGGGTTTGTGGAGAACTACATGTTGGATGATGCACAGAAAACTTTTGAAAGGATGCCAGAACGTGATGTTGTGTCTTGGACTAACATTATATCAGCTTATGAGCAAACCAAGCGTGAGGATGTTGCATTCAAACTGTTCCGTGACATGCTTTCTCTGGGGACAAAGCCAAATGAATTGACGATCTCCTCCCTCCTTTCTGCCTGTGCATCCCTTGGCACTACTAAACATGGGGAACAAATTCATGCGTTGACATACAAAGTTGGGCTCAATTCTTGTCTATTTGTATGTAATAATGTATTTCAAATGTGGCAGTCTAGAAGGCATTTCTGTATTCAAAGAGATGATCAGTCGAGACACAGTTACTTGGAATGCAGTATTAGTTGGCTGTGCACAGAATGGACTAGCGAAAGAGGCTATTGAGATTTTCAAACAGATGGAAGCTGCAGGAATTTTTCCCAATGAAATCACGTTCATTGGTGTTCTGTGGCCTGTAGCCATGCTGAATTAATAGGTGAGGGCTGGAAGTATTTTAGTTCCATGAATCATCATGGAATTACCCCCTCAATTAAGCATTATACATGCATGGTTGATCTTCTTGGCAGGGCTGGAAAGCTTTCTGATGCTGAAGCTCTCATTGAAACCATGCCGGTTAATCAAGATTGTGTGATATGGGAGGCACTTCTTGGTGCTTGTAGGATCCATGGTAATTTAGAACTTGCAGAAAAAGTTGCAGAAAGGCTACTTAACATGGGAACAGGCAGACCTGGAACATATATTATATTATCTAATGTCTATGCATGTAAAGGTCTGTGGGAGGAGGTTTCAGAAATCCGAAATATGATGAAAAACAAGGGAGTTGCAAAAGAACCAGGAGTCAGTTGGATACAGATCAAATGCAGGGTACACTATTTTCTTACCAAGGACGATTCTCATGATGAGATTGAAGAGATTCATTCGTGCTTGAAAGTGTTGTTAAAATGTCTCACCCTGGCAGGTTATGTGCCAGATACAAATTTTGTGCTTCATGATGTGGAAGAGGAACAAAACCAAGATGAGCTTCTATACCATAGTGAGAAGCTTGCCATTGCTTATGGGATCTTGCACACGCCAAACAAGATGCCGATTCGAATCATGAAGAATCTTCGGATTTGTGGAGATTGTCACACCTTCATGAAATTTGTCTCTCAAGTCACACAACGAAAGATAATAATAAGAGACGGGAATAGGTTCCACCATTTTGTTGATGGTTTATGTGACTGCAAGGATTACTGGTAA

mRNA sequence

ATGCAACAAAACGATCCTTCAACTCACCAAACTCGGCCGACTCACCGAAGCCCGAGACGTCTTCGACTCAATGTCTCAACGAGATTCAGTCTCCTGGAACTCGATGATTTCTGGGTATGCCTAGAACGGACTTTTACGCAGAGCAAAAGTGCTGTTCGATGCTTTTCGTGGGAAGAATGTATTGTCATTCTCGAATGGTTGTTGAGGCTCGCGAGCTTTTTTGATCGGATGGAGGAGCGGAATTCTGTATCGTGGATGGCTATGATAGCTGGGTATGTTGAGATTGGTGAGTATCGAGAAGCTTGGCGTGTGTTTTTTTGGATGTTGAGGAATGGAGCGAGGCCTGATCAGGCTACATTTGTGGTTGCTTTCTCAACGGTTACTTGGTTGGATGATTTGGAGTTGCTTGAGAGTTTGAGAACAATGGCTGTAAAGACTGGTTATGAGAGGGATGTTCTTGTGGGGACAGCAGTTCTTAATGTGTATACGAGGAATGGAACCATGATCGCTGGACTTGCACAAAATGGTCAAAGCATTGAAGCTTTGGAGTTGTTTGCTGAACTCCATAGATCAGGAACTGTACCAAATCATTCAAGCTTCACTAGTGCCTTCTTTGCTTGTTCAAATGTTGGATTTGTAAAGGTTGATAAAGATACTGTATCTTGGAACCCCCTTGTCAGTGGGTTTGTGGAGAACTACATGTTGGATGATGCACAGAAAACTTTTGAAAGGATGCCAGAACGTGATGTTGTGTCTTGGACTAACATTATATCAGCTTATGAGCAAACCAAGCGTGAGGATGTTGCATTCAAACTGTTCCGTGACATGCTTTCTCTGGGGACAAAGCCAAATGAATTGACGATCTCCTCCCTCCTTTCTGCCTGTGCATCCCTTGGCACTACTAAACATGGGGAACAAATTCATGCGTTGACATACAAAGTTGGGCTCAATTCTTGTCTATTTGTATGTCTGTGGGAGGAGGTTTCAGAAATCCGAAATATGATGAAAAACAAGGGAGTTGCAAAAGAACCAGGAGTCAGTTGGATACAGATCAAATGCAGGGTACACTATTTTCTTACCAAGGACGATTCTCATGATGAGATTGAAGAGATTCATTCGTGCTTGAAAGTGTTGTTAAAATGTCTCACCCTGGCAGGTTATGTGCCAGATACAAATTTTGTGCTTCATGATGTGGAAGAGGAACAAAACCAAGATGAGCTTCTATACCATAGTGAGAAGCTTGCCATTGCTTATGGGATCTTGCACACGCCAAACAAGATGCCGATTCGAATCATGAAGAATCTTCGGATTTGTGGAGATTGTCACACCTTCATGAAATTTGTCTCTCAAGTCACACAACGAAAGATAATAATAAGAGACGGGAATAGGTTCCACCATTTTGTTGATGGTTTATGTGACTGCAAGGATTACTGGTAA

Coding sequence (CDS)

ATGCAACAAAACGATCCTTCAACTCACCAAACTCGGCCGACTCACCGAAGCCCGAGACGTCTTCGACTCAATGTCTCAACGAGATTCAGTCTCCTGGAACTCGATGATTTCTGGGTATGCCTAGAACGGACTTTTACGCAGAGCAAAAGTGCTGTTCGATGCTTTTCGTGGGAAGAATGTATTGTCATTCTCGAATGGTTGTTGAGGCTCGCGAGCTTTTTTGATCGGATGGAGGAGCGGAATTCTGTATCGTGGATGGCTATGATAGCTGGGTATGTTGAGATTGGTGAGTATCGAGAAGCTTGGCGTGTGTTTTTTTGGATGTTGAGGAATGGAGCGAGGCCTGATCAGGCTACATTTGTGGTTGCTTTCTCAACGGTTACTTGGTTGGATGATTTGGAGTTGCTTGAGAGTTTGAGAACAATGGCTGTAAAGACTGGTTATGAGAGGGATGTTCTTGTGGGGACAGCAGTTCTTAATGTGTATACGAGGAATGGAACCATGATCGCTGGACTTGCACAAAATGGTCAAAGCATTGAAGCTTTGGAGTTGTTTGCTGAACTCCATAGATCAGGAACTGTACCAAATCATTCAAGCTTCACTAGTGCCTTCTTTGCTTGTTCAAATGTTGGATTTGTAAAGGTTGATAAAGATACTGTATCTTGGAACCCCCTTGTCAGTGGGTTTGTGGAGAACTACATGTTGGATGATGCACAGAAAACTTTTGAAAGGATGCCAGAACGTGATGTTGTGTCTTGGACTAACATTATATCAGCTTATGAGCAAACCAAGCGTGAGGATGTTGCATTCAAACTGTTCCGTGACATGCTTTCTCTGGGGACAAAGCCAAATGAATTGACGATCTCCTCCCTCCTTTCTGCCTGTGCATCCCTTGGCACTACTAAACATGGGGAACAAATTCATGCGTTGACATACAAAGTTGGGCTCAATTCTTGTCTATTTGTATGTCTGTGGGAGGAGGTTTCAGAAATCCGAAATATGATGAAAAACAAGGGAGTTGCAAAAGAACCAGGAGTCAGTTGGATACAGATCAAATGCAGGGTACACTATTTTCTTACCAAGGACGATTCTCATGATGAGATTGAAGAGATTCATTCGTGCTTGAAAGTGTTGTTAAAATGTCTCACCCTGGCAGGTTATGTGCCAGATACAAATTTTGTGCTTCATGATGTGGAAGAGGAACAAAACCAAGATGAGCTTCTATACCATAGTGAGAAGCTTGCCATTGCTTATGGGATCTTGCACACGCCAAACAAGATGCCGATTCGAATCATGAAGAATCTTCGGATTTGTGGAGATTGTCACACCTTCATGAAATTTGTCTCTCAAGTCACACAACGAAAGATAATAATAAGAGACGGGAATAGGTTCCACCATTTTGTTGATGGTTTATGTGACTGCAAGGATTACTGGTAA

Protein sequence

MQQNDPSTHQTRPTHRSPRRLRLNVSTRFSLLELDDFWVCLERTFTQSKSAVRCFSWEECIVILEWLLRLASFFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLNVYTRNGTMIAGLAQNGQSIEALELFAELHRSGTVPNHSSFTSAFFACSNVGFVKVDKDTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRDMLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVCLWEEVSEIRNMMKNKGVAKEPGVSWIQIKCRVHYFLTKDDSHDEIEEIHSCLKVLLKCLTLAGYVPDTNFVLHDVEEEQNQDELLYHSEKLAIAYGILHTPNKMPIRIMKNLRICGDCHTFMKFVSQVTQRKIIIRDGNRFHHFVDGLCDCKDYW
Homology
BLAST of HG10023242 vs. NCBI nr
Match: XP_022148556.1 (pentatricopeptide repeat-containing protein At4g02750-like [Momordica charantia])

HSP 1 Score: 561.2 bits (1445), Expect = 8.4e-156
Identity = 341/747 (45.65%), Postives = 365/747 (48.86%), Query Frame = 0

Query: 67  LLRLASFFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFST 126
           ++     FDRMEERNSVSWM MI+GYVEIGEYREAW +F  M R+GARPDQA FVVAFST
Sbjct: 167 VIEARELFDRMEERNSVSWMVMISGYVEIGEYREAWHLFSRMSRSGARPDQAIFVVAFST 226

Query: 127 VTWLDDLELLESLRTMAVKTGYERDVLVGTAVLNVYTRNG-------------------- 186
           VTWLD+LELLESLRTMAVKTGYE DVLVGTA LN YT NG                    
Sbjct: 227 VTWLDNLELLESLRTMAVKTGYESDVLVGTATLNAYTMNGCLEPAYRFFETMPEKNEYSW 286

Query: 187 ------------------------------------------------------------ 246
                                                                       
Sbjct: 287 TTMISAFSQCDRLNDAIALYERTSEKSVAVQTVIITAFAQKGRIQEARNKFEEIVNPNVV 346

Query: 247 ----------------------------------TMIAGLAQNGQSIEALELFAELHRSG 306
                                              MIAGLAQNGQSI+ALELFAELHRSG
Sbjct: 347 AWNAMVAAYAHNGMLDEAKDTFLRMPVRNAVSWAAMIAGLAQNGQSIDALELFAELHRSG 406

Query: 307 TVPNHSSFTSAFFACSNVGFVKV------------------------------------- 366
           TVPNHSSFTSA FACSN+GFVKV                                     
Sbjct: 407 TVPNHSSFTSALFACSNIGFVKVGRQIHSLSIKMRCQFNLFVGNGLISMYAKCKGINDAP 466

Query: 367 -------DKDTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDV 426
                  +KDTVSWN L+SGFVEN MLD+A+K FE MPERDVVSWT IIS YEQT  EDV
Sbjct: 467 LLFNTMKNKDTVSWNCLISGFVENCMLDEARKIFEGMPERDVVSWTTIISGYEQTGHEDV 526

Query: 427 AFKLFRDMLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVC----- 479
           AF LF DML++GTKPNE TISSLLSACASL TTK GEQIHALTYK+GLNSCLFVC     
Sbjct: 527 AFMLFHDMLTVGTKPNESTISSLLSACASLCTTKLGEQIHALTYKLGLNSCLFVCNALIT 586

BLAST of HG10023242 vs. NCBI nr
Match: XP_023515085.1 (pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 557.8 bits (1436), Expect = 9.3e-155
Identity = 335/740 (45.27%), Postives = 368/740 (49.73%), Query Frame = 0

Query: 74  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
           FDRM ERNSVSWM M++GYVEIGEYREAWRVF  MLR+GARPDQATFVVAFSTV+WLD+L
Sbjct: 174 FDRMVERNSVSWMVMMSGYVEIGEYREAWRVFSRMLRSGARPDQATFVVAFSTVSWLDNL 233

Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNGT-------------------------- 193
           ELL SLRTMAVK GYE DVLVGT++LN YTR+G+                          
Sbjct: 234 ELLGSLRTMAVKVGYESDVLVGTSILNAYTRSGSLGPAYQFFEAMPEKNEYSWTTMISAF 293

Query: 194 ------------------------------------------------------------ 253
                                                                       
Sbjct: 294 SQCDKLNDAIALYERTSQKSVAIQTAIITAFAQKGRIQEARNKFEEIVKPNVVAWNAMIA 353

Query: 254 ----------------------------MIAGLAQNGQSIEALELFAELHRSGTVPNHSS 313
                                       MIAGLAQNGQSIEALELF++L RSGTVPNHS+
Sbjct: 354 AYAHNGMLEEAKDTFLRMPVRNAVSWAAMIAGLAQNGQSIEALELFSDLQRSGTVPNHST 413

Query: 314 FTSAFFACSNVGFVKV-------------------------------------------- 373
           FTSA FACSN+GFV+V                                            
Sbjct: 414 FTSALFACSNIGFVEVGRQIHALSIKMRCQFNLFVGNGLISMYARCNDINDVVLLFNTMK 473

Query: 374 DKDTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRD 433
            KDTVSWN L+SGFVEN MLDDA K FERMPERDVVSWT+IISAYE+   EDVAF LF D
Sbjct: 474 SKDTVSWNSLISGFVENNMLDDAWKAFERMPERDVVSWTSIISAYEKAGLEDVAFGLFHD 533

Query: 434 MLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVC------------ 479
           M+S+GT PNE TIS+LLSACASLGTTK GEQIHALTYK+GLNSCL VC            
Sbjct: 534 MVSVGTTPNESTISALLSACASLGTTKLGEQIHALTYKLGLNSCLIVCNAVITMHFKCGS 593

BLAST of HG10023242 vs. NCBI nr
Match: XP_023004730.1 (pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita maxima])

HSP 1 Score: 554.3 bits (1427), Expect = 1.0e-153
Identity = 333/740 (45.00%), Postives = 365/740 (49.32%), Query Frame = 0

Query: 74  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
           FDRM ERNSVSWM M++GYVEIGEYREAWRVF  MLR+GARPDQATFVVAFSTV WLD+L
Sbjct: 174 FDRMVERNSVSWMVMMSGYVEIGEYREAWRVFSRMLRSGARPDQATFVVAFSTVAWLDNL 233

Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNGT-------------------------- 193
           ELL SLRTMAVK GYE DVLVGT++LN YTRNG+                          
Sbjct: 234 ELLGSLRTMAVKVGYESDVLVGTSILNAYTRNGSLEPAFQFFEAMPEKNEYSWTTMISAF 293

Query: 194 ------------------------------------------------------------ 253
                                                                       
Sbjct: 294 SQCDKLNDAIALYERTSQESVAIQTAIITAFAHKGRIEEARNKFEEIVKPNVVAWNAMVA 353

Query: 254 ----------------------------MIAGLAQNGQSIEALELFAELHRSGTVPNHSS 313
                                       MIAGLAQNGQSIEALELF++LHRSGTVPNHS+
Sbjct: 354 AYAHNGMLEEAKDTFLRMPVRNAVSWAAMIAGLAQNGQSIEALELFSDLHRSGTVPNHST 413

Query: 314 FTSAFFACSNVGFVKV-------------------------------------------- 373
           FTS+  ACSN+GFV+V                                            
Sbjct: 414 FTSSLSACSNIGFVEVGRQIHALSIKMRCQFNLFVGNGLISMYAKCKDIDGVVLLFNTMK 473

Query: 374 DKDTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRD 433
            KDTVSWN L+SGFVEN MLDDA K FERMPERDVVSWT+IISAYE+   EDVAF LF D
Sbjct: 474 SKDTVSWNSLISGFVENNMLDDAWKVFERMPERDVVSWTSIISAYEKAGLEDVAFGLFHD 533

Query: 434 MLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVC------------ 479
           MLS+GT PNE TIS+LLSACASLGTTK GEQIHALTYK+GLNSCL VC            
Sbjct: 534 MLSVGTTPNESTISTLLSACASLGTTKLGEQIHALTYKLGLNSCLIVCNAVITMYFKCGS 593

BLAST of HG10023242 vs. NCBI nr
Match: KAG7025727.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 551.6 bits (1420), Expect = 6.7e-153
Identity = 334/740 (45.14%), Postives = 363/740 (49.05%), Query Frame = 0

Query: 74  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
           FDRM ERNSVSWM M++GYVEIGEYREAWRVF  MLR+GARPDQATFVVAFSTV WLD+L
Sbjct: 250 FDRMVERNSVSWMVMMSGYVEIGEYREAWRVFSRMLRSGARPDQATFVVAFSTVAWLDNL 309

Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNGT-------------------------- 193
            LL SLRTMAVK GYE DVLVGT++LN YTRNG+                          
Sbjct: 310 VLLGSLRTMAVKVGYESDVLVGTSILNAYTRNGSLETAFQFFEAMPEKNEYSWTTMISAF 369

Query: 194 ------------------------------------------------------------ 253
                                                                       
Sbjct: 370 SQCDKLNDAIALYERTSQGSVAIQTAIITAFAQKGRIQEARNKFEEIVKPNVVAWNAMIA 429

Query: 254 ----------------------------MIAGLAQNGQSIEALELFAELHRSGTVPNHSS 313
                                       MIAGLAQNGQSIEALELF++L RSGTVPNHS+
Sbjct: 430 AYAHNGMLEEAKDTFLRMPVRNAVSWAAMIAGLAQNGQSIEALELFSDLQRSGTVPNHST 489

Query: 314 FTSAFFACSNVGFVKV-------------------------------------------- 373
           FTSA FACSN+GFV+V                                            
Sbjct: 490 FTSALFACSNIGFVEVGRQIHALSIKMRCQFNLFVGNGLISMYAKCKDINGVVLLFNTMK 549

Query: 374 DKDTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRD 433
            KDTVSWN L+SGFVEN MLDDA K FERMPERDVVSWT+IISAY + + EDVAF LF D
Sbjct: 550 SKDTVSWNSLISGFVENNMLDDAWKAFERMPERDVVSWTDIISAYAKARLEDVAFGLFHD 609

Query: 434 MLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVC------------ 479
           MLS+GT PNE TIS+LLSACASLGTTK GEQIHALTYK+GLNSCL  C            
Sbjct: 610 MLSVGTMPNESTISALLSACASLGTTKLGEQIHALTYKLGLNSCLIACNAVITMYFKCGS 669

BLAST of HG10023242 vs. NCBI nr
Match: KAG6593380.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 548.9 bits (1413), Expect = 4.3e-152
Identity = 333/740 (45.00%), Postives = 362/740 (48.92%), Query Frame = 0

Query: 74  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
           FDRM ERNSVSWM M++GYVEIGEYREAWRVF  MLR+GARPDQATFVVAFSTV WLD+L
Sbjct: 174 FDRMVERNSVSWMVMMSGYVEIGEYREAWRVFSRMLRSGARPDQATFVVAFSTVAWLDNL 233

Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNGT-------------------------- 193
            LL SLRTMAVK GYE DVLVGT++LN YTRNG+                          
Sbjct: 234 VLLGSLRTMAVKVGYESDVLVGTSILNAYTRNGSLETAFQFFEAMPEKNEYSWTTMISAF 293

Query: 194 ------------------------------------------------------------ 253
                                                                       
Sbjct: 294 SQCDKLNDAIALYERTSQGSVAIQTAIITAFAQKGRIQEARNKFEEIVKPNVVAWNAMIA 353

Query: 254 ----------------------------MIAGLAQNGQSIEALELFAELHRSGTVPNHSS 313
                                       MIAGLAQNGQSIEALELF++L RSGTVPNHS+
Sbjct: 354 AYAHNGMLEEAKDTFLRMPVRNAVSWAAMIAGLAQNGQSIEALELFSDLQRSGTVPNHST 413

Query: 314 FTSAFFACSNVGFVKV-------------------------------------------- 373
           FTSA FACSN+GFV+V                                            
Sbjct: 414 FTSALFACSNIGFVEVGRQIHALSIKMRCQFNLFVGNGLISMYAKCKDINGVVLLFNTMK 473

Query: 374 DKDTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRD 433
            KDTVSWN L+SGFVEN MLDDA K FERMPERDVVSWT+IISAY + + EDVAF LF D
Sbjct: 474 SKDTVSWNSLISGFVENNMLDDAWKAFERMPERDVVSWTDIISAYAKARLEDVAFGLFHD 533

Query: 434 MLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVC------------ 479
           MLS+GT PNE TIS+LLSACAS GTTK GEQIHALTYK+GLNSCL  C            
Sbjct: 534 MLSVGTMPNESTISALLSACASPGTTKLGEQIHALTYKLGLNSCLIACNAVITMYFKCGS 593

BLAST of HG10023242 vs. ExPASy Swiss-Prot
Match: Q9SI53 (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H44 PE=2 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 4.5e-75
Identity = 170/515 (33.01%), Postives = 251/515 (48.74%), Query Frame = 0

Query: 74  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
           FD+M +RN +SW  MI+ Y +   +++A  +   MLR+  RP+  T+     +   + D+
Sbjct: 119 FDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV 178

Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNG---------------------TMIAGL 193
            +   L    +K G E DV V +A+++V+ + G                     ++I G 
Sbjct: 179 RM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGF 238

Query: 194 AQNGQSIEALELFAELHRSGTVPNHSSFTSAFFAC-----------SNVGFVKVDKDTVS 253
           AQN +S  ALELF  + R+G +   ++ TS   AC           ++V  VK D+D + 
Sbjct: 239 AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLIL 298

Query: 254 WNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRDMLSLGT 313
            N LV  + +   L+DA + F +M ERDV++W+ +IS   Q      A KLF  M S GT
Sbjct: 299 NNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGT 358

Query: 314 KPNELTISSLLSACASLGTTKHGE------------------------------------ 373
           KPN +TI  +L AC+  G  + G                                     
Sbjct: 359 KPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAV 418

Query: 374 --------QIHALTYKVGLNSC-------------------------LFVCL-------- 433
                   +  A+T++  L +C                          +  L        
Sbjct: 419 KLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQ 478

Query: 434 -WEEVSEIRNMMKNKGVAKEPGVSWIQIKCRVHYFLTKDDSHDEIEEIHSCLKVLLKCLT 479
            W+ V EIR  M+++G+ KEPG SWI++  ++H F+  D+SH +I E+   L  L+  LT
Sbjct: 479 KWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLT 538

BLAST of HG10023242 vs. ExPASy Swiss-Prot
Match: Q9SHZ8 (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 8.7e-71
Identity = 162/444 (36.49%), Postives = 235/444 (52.93%), Query Frame = 0

Query: 72  SFFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLD 131
           + F  +++R+ V+W AMI GY + G Y EA  +F  M+  G RP+  T     S  + L 
Sbjct: 368 NIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLA 427

Query: 132 DLELLESLRTMAVKTGYERDVLVGTAVLNVYTRNG----------------------TMI 191
            L   + +   AVK+G    V V  A++ +Y + G                      +MI
Sbjct: 428 SLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMI 487

Query: 192 AGLAQNGQSIEALELFAELHRSGTVPNHSSFTSAFFACSNVGFVK-----------VDK- 251
             LAQ+G + EALELF  +   G  P+H ++   F AC++ G V            VDK 
Sbjct: 488 IALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKI 547

Query: 252 -DTVS-WNPLVSGFVENYMLDDAQKTFERMP-ERDVVSWTNIISAYEQTKREDVAFKLFR 311
             T+S +  +V  F    +L +AQ+  E+MP E DVV+W +++SA    K  D+  K+  
Sbjct: 548 IPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLG-KVAA 607

Query: 312 DMLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVCLWEEVSEIRNM 371
           + L L    N    S+L +  ++ G                         WEE ++IR  
Sbjct: 608 ERLLLLEPENSGAYSALANLYSACGK------------------------WEEAAKIRKS 667

Query: 372 MKNKGVAKEPGVSWIQIKCRVHYFLTKDDSHDEIEEIHSCLKVLLKCLTLAGYVPDTNFV 431
           MK+  V KE G SWI++K +VH F  +D +H E  EI+  +K +   +   GYVPDT  V
Sbjct: 668 MKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASV 727

Query: 432 LHDVEEEQNQDELLYHSEKLAIAYGILHTPNKMPIRIMKNLRICGDCHTFMKFVSQVTQR 479
           LHD+EEE  +  L +HSEKLAIA+G++ TP+K  +RIMKNLR+C DCHT +KF+S++  R
Sbjct: 728 LHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGR 786

BLAST of HG10023242 vs. ExPASy Swiss-Prot
Match: Q9LIQ7 (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H87 PE=3 SV=1)

HSP 1 Score: 258.8 bits (660), Expect = 1.2e-67
Identity = 161/516 (31.20%), Postives = 244/516 (47.29%), Query Frame = 0

Query: 74  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
           F++M +R+ V+W  +I+GY +     +A   F  MLR G  P++ T              
Sbjct: 118 FEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177

Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNGTM---------------------IAGL 193
                L    VK G++ +V VG+A+L++YTR G M                     IAG 
Sbjct: 178 CCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIAGH 237

Query: 194 AQNGQSIEALELFAELHRSGTVPNHSSFTSAFFACSNVGFVKVDKDTVSW---------- 253
           A+   + +ALELF  + R G  P+H S+ S F ACS+ GF++  K   ++          
Sbjct: 238 ARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVA 297

Query: 254 ---NPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRDMLSL 313
              N L+  + ++  + DA+K F+R+ +RDVVSW ++++AY Q      A   F +M  +
Sbjct: 298 FAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRV 357

Query: 314 GTKPNELTISSLLSACASLGTTKHGEQIHALTYKVG------------------------ 373
           G +PNE++  S+L+AC+  G    G   + L  K G                        
Sbjct: 358 GIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRA 417

Query: 374 -------------------LNSCLF-------------------------VCL------- 433
                              LN+C                           V L       
Sbjct: 418 LRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVILYNIYASG 477

Query: 434 --WEEVSEIRNMMKNKGVAKEPGVSWIQIKCRVHYFLTKDDSHDEIEEIHSCLKVLLKCL 479
             W + + +R  MK  GV KEP  SW++I+  +H F+  D+ H + EEI    + +L  +
Sbjct: 478 GRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARKWEEVLAKI 537

BLAST of HG10023242 vs. ExPASy Swiss-Prot
Match: Q9FK93 (Pentatricopeptide repeat-containing protein At5g39680 OS=Arabidopsis thaliana OX=3702 GN=EMB2744 PE=1 SV=1)

HSP 1 Score: 256.5 bits (654), Expect = 5.8e-67
Identity = 146/441 (33.11%), Postives = 229/441 (51.93%), Query Frame = 0

Query: 74  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
           FD    +N      ++  Y +   + EA  +F  M      P++ TF +  +++  L  L
Sbjct: 295 FDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLL 354

Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNG---------------------TMIAGL 193
           +  + L  + +K+GY   V+VG A++N+Y ++G                     TMI+G 
Sbjct: 355 KQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGC 414

Query: 194 AQNGQSIEALELFAELHRSGTVPNHSSFTSAFFACSNVGFVK--------------VDKD 253
           + +G   EALE F  +  +G +PN  +F     ACS++GFV+              V  D
Sbjct: 415 SHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPD 474

Query: 254 TVSWNPLVSGFVENYMLDDAQKTFERMP-ERDVVSWTNIISAYEQTKREDVAFKLFRDML 313
              +  +V    +  M  DA+      P E DVV+W  +++A    +   +  K+     
Sbjct: 475 IQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAE--Y 534

Query: 314 SLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVCLWEEVSEIRNMMKN 373
           ++   PN+  +  LLS             IHA + +           WE V+++R++M N
Sbjct: 535 AIEKYPNDSGVYVLLS------------NIHAKSRE-----------WEGVAKVRSLMNN 594

Query: 374 KGVAKEPGVSWIQIKCRVHYFLTKDDSHDEIEEIHSCLKVLLKCLTLAGYVPDTNFVLHD 433
           +GV KEPGVSWI I+ + H FL +D+ H EI  I++ +K ++  +   GY PD     HD
Sbjct: 595 RGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHD 654

Query: 434 VEEEQNQDELLYHSEKLAIAYGILHTPNKMPIRIMKNLRICGDCHTFMKFVSQVTQRKII 479
           V+EEQ +D L YHSEKLA+AYG++ TP K P+ + KN+RIC DCH+ +K +S++++R I+
Sbjct: 655 VDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIV 710

BLAST of HG10023242 vs. ExPASy Swiss-Prot
Match: Q9SY02 (Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H24 PE=3 SV=1)

HSP 1 Score: 249.2 bits (635), Expect = 9.3e-65
Identity = 157/447 (35.12%), Postives = 232/447 (51.90%), Query Frame = 0

Query: 72  SFFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLD 131
           + FD+M +R+ VSW AMIAGY + G   EA R+F  M R G R ++++F  A ST   + 
Sbjct: 364 NLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVV 423

Query: 132 DLELLESLRTMAVKTGYERDVLVGTAVLNVYTRNG---------------------TMIA 191
            LEL + L    VK GYE    VG A+L +Y + G                     TMIA
Sbjct: 424 ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIA 483

Query: 192 GLAQNGQSIEALELFAELHRSGTVPNHSSFTSAFFACSNVGFVKVDKD---TVSWNPLVS 251
           G +++G    AL  F  + R G  P+ ++  +   ACS+ G V   +    T++ +  V 
Sbjct: 484 GYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVM 543

Query: 252 GFVENY-----------MLDDAQKTFERMP-ERDVVSWTNIISA---YEQTK-REDVAFK 311
              ++Y           +L+DA    + MP E D   W  ++ A   +  T+  E  A K
Sbjct: 544 PNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADK 603

Query: 312 LFRDMLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVCLWEEVSEI 371
           +F        +P    +  LLS             ++A + +           W +V ++
Sbjct: 604 IF------AMEPENSGMYVLLS------------NLYASSGR-----------WGDVGKL 663

Query: 372 RNMMKNKGVAKEPGVSWIQIKCRVHYFLTKDDSHDEIEEIHSCLKVLLKCLTLAGYVPDT 431
           R  M++KGV K PG SWI+I+ + H F   D+ H E +EI + L+ L   +  AGYV  T
Sbjct: 664 RVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKT 723

Query: 432 NFVLHDVEEEQNQDELLYHSEKLAIAYGILHTPNKMPIRIMKNLRICGDCHTFMKFVSQV 479
           + VLHDVEEE+ +  + YHSE+LA+AYGI+   +  PIR++KNLR+C DCH  +K+++++
Sbjct: 724 SVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARI 781

BLAST of HG10023242 vs. ExPASy TrEMBL
Match: A0A6J1D5R5 (pentatricopeptide repeat-containing protein At4g02750-like OS=Momordica charantia OX=3673 GN=LOC111017187 PE=3 SV=1)

HSP 1 Score: 561.2 bits (1445), Expect = 4.1e-156
Identity = 341/747 (45.65%), Postives = 365/747 (48.86%), Query Frame = 0

Query: 67  LLRLASFFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFST 126
           ++     FDRMEERNSVSWM MI+GYVEIGEYREAW +F  M R+GARPDQA FVVAFST
Sbjct: 167 VIEARELFDRMEERNSVSWMVMISGYVEIGEYREAWHLFSRMSRSGARPDQAIFVVAFST 226

Query: 127 VTWLDDLELLESLRTMAVKTGYERDVLVGTAVLNVYTRNG-------------------- 186
           VTWLD+LELLESLRTMAVKTGYE DVLVGTA LN YT NG                    
Sbjct: 227 VTWLDNLELLESLRTMAVKTGYESDVLVGTATLNAYTMNGCLEPAYRFFETMPEKNEYSW 286

Query: 187 ------------------------------------------------------------ 246
                                                                       
Sbjct: 287 TTMISAFSQCDRLNDAIALYERTSEKSVAVQTVIITAFAQKGRIQEARNKFEEIVNPNVV 346

Query: 247 ----------------------------------TMIAGLAQNGQSIEALELFAELHRSG 306
                                              MIAGLAQNGQSI+ALELFAELHRSG
Sbjct: 347 AWNAMVAAYAHNGMLDEAKDTFLRMPVRNAVSWAAMIAGLAQNGQSIDALELFAELHRSG 406

Query: 307 TVPNHSSFTSAFFACSNVGFVKV------------------------------------- 366
           TVPNHSSFTSA FACSN+GFVKV                                     
Sbjct: 407 TVPNHSSFTSALFACSNIGFVKVGRQIHSLSIKMRCQFNLFVGNGLISMYAKCKGINDAP 466

Query: 367 -------DKDTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDV 426
                  +KDTVSWN L+SGFVEN MLD+A+K FE MPERDVVSWT IIS YEQT  EDV
Sbjct: 467 LLFNTMKNKDTVSWNCLISGFVENCMLDEARKIFEGMPERDVVSWTTIISGYEQTGHEDV 526

Query: 427 AFKLFRDMLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVC----- 479
           AF LF DML++GTKPNE TISSLLSACASL TTK GEQIHALTYK+GLNSCLFVC     
Sbjct: 527 AFMLFHDMLTVGTKPNESTISSLLSACASLCTTKLGEQIHALTYKLGLNSCLFVCNALIT 586

BLAST of HG10023242 vs. ExPASy TrEMBL
Match: A0A6J1KVF3 (pentatricopeptide repeat-containing protein At4g02750-like OS=Cucurbita maxima OX=3661 GN=LOC111497943 PE=3 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 5.0e-154
Identity = 333/740 (45.00%), Postives = 365/740 (49.32%), Query Frame = 0

Query: 74  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
           FDRM ERNSVSWM M++GYVEIGEYREAWRVF  MLR+GARPDQATFVVAFSTV WLD+L
Sbjct: 174 FDRMVERNSVSWMVMMSGYVEIGEYREAWRVFSRMLRSGARPDQATFVVAFSTVAWLDNL 233

Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNGT-------------------------- 193
           ELL SLRTMAVK GYE DVLVGT++LN YTRNG+                          
Sbjct: 234 ELLGSLRTMAVKVGYESDVLVGTSILNAYTRNGSLEPAFQFFEAMPEKNEYSWTTMISAF 293

Query: 194 ------------------------------------------------------------ 253
                                                                       
Sbjct: 294 SQCDKLNDAIALYERTSQESVAIQTAIITAFAHKGRIEEARNKFEEIVKPNVVAWNAMVA 353

Query: 254 ----------------------------MIAGLAQNGQSIEALELFAELHRSGTVPNHSS 313
                                       MIAGLAQNGQSIEALELF++LHRSGTVPNHS+
Sbjct: 354 AYAHNGMLEEAKDTFLRMPVRNAVSWAAMIAGLAQNGQSIEALELFSDLHRSGTVPNHST 413

Query: 314 FTSAFFACSNVGFVKV-------------------------------------------- 373
           FTS+  ACSN+GFV+V                                            
Sbjct: 414 FTSSLSACSNIGFVEVGRQIHALSIKMRCQFNLFVGNGLISMYAKCKDIDGVVLLFNTMK 473

Query: 374 DKDTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRD 433
            KDTVSWN L+SGFVEN MLDDA K FERMPERDVVSWT+IISAYE+   EDVAF LF D
Sbjct: 474 SKDTVSWNSLISGFVENNMLDDAWKVFERMPERDVVSWTSIISAYEKAGLEDVAFGLFHD 533

Query: 434 MLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVC------------ 479
           MLS+GT PNE TIS+LLSACASLGTTK GEQIHALTYK+GLNSCL VC            
Sbjct: 534 MLSVGTTPNESTISTLLSACASLGTTKLGEQIHALTYKLGLNSCLIVCNAVITMYFKCGS 593

BLAST of HG10023242 vs. ExPASy TrEMBL
Match: A0A6J1HAB1 (pentatricopeptide repeat-containing protein At4g02750-like OS=Cucurbita moschata OX=3662 GN=LOC111461023 PE=3 SV=1)

HSP 1 Score: 539.7 bits (1389), Expect = 1.3e-149
Identity = 328/740 (44.32%), Postives = 361/740 (48.78%), Query Frame = 0

Query: 74  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
           FDRM ERNSVSWM M++GYV I EYREAWRVF  MLR+GARPDQATFVVAFSTV WLD+L
Sbjct: 174 FDRMVERNSVSWMVMMSGYVGICEYREAWRVFSRMLRSGARPDQATFVVAFSTVAWLDNL 233

Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNGTM------------------------- 193
           ELL +LRTMAVK GYE DVLVGT++LN YTR+G++                         
Sbjct: 234 ELLGNLRTMAVKVGYESDVLVGTSILNAYTRSGSLGPAYQFFEAMPEKNEYSWTTMISAF 293

Query: 194 ------------------------------------------------------------ 253
                                                                       
Sbjct: 294 SQCDKLNDAIALYERTSQKSVAIQTAIITAFAQKGRIQEARNKFEEIVKPNVVAWNAMIA 353

Query: 254 -----------------------------IAGLAQNGQSIEALELFAELHRSGTVPNHSS 313
                                        IAGLAQNGQSIEALELF++L RSGTVPNHS+
Sbjct: 354 AYAHNGMLEEAKDTFLRMPVRNAVSWAAIIAGLAQNGQSIEALELFSDLQRSGTVPNHST 413

Query: 314 FTSAFFACSNVGFVKV-------------------------------------------- 373
           FTSA FACSN+GFV+V                                            
Sbjct: 414 FTSALFACSNIGFVEVGRQIHALSIKMRCQFNLFVGNGLISMYAKCKDINDVVLLFNTMK 473

Query: 374 DKDTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRD 433
            KDTVSWN L+SGFVEN MLDDA K FERMPERDVVSWT+IISAYE+   EDVAF LF D
Sbjct: 474 SKDTVSWNSLISGFVENNMLDDAWKAFERMPERDVVSWTSIISAYEKAGLEDVAFGLFHD 533

Query: 434 MLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVC------------ 479
           M+S+GT PNE TIS+LLSACASLGTTK GEQIHA TYK+GLNSCL VC            
Sbjct: 534 MVSVGTTPNESTISALLSACASLGTTKLGEQIHASTYKLGLNSCLIVCNAVITMYFKCGS 593

BLAST of HG10023242 vs. ExPASy TrEMBL
Match: A0A2N9IF76 (DYW_deaminase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50980 PE=3 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 2.7e-123
Identity = 281/740 (37.97%), Postives = 331/740 (44.73%), Query Frame = 0

Query: 75  DRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDLE 134
           ++M ERN VSWM MI+G++EI EY EAW VF  M+R+G RPDQA  VVA S V  L+DLE
Sbjct: 127 EKMGERNLVSWMVMISGFIEISEYGEAWGVFLMMMRSGVRPDQAVLVVALSAVMRLNDLE 186

Query: 135 LLESLRTMAVKTGYERDVLVGTAVLNVYTRNGT--------------------------- 194
           L+ESLRT+A+KTGYE DV+VGTA+L+ YTRNG+                           
Sbjct: 187 LVESLRTLAIKTGYEGDVVVGTAILDAYTRNGSLDYAVKFFEMMPIRNEYSWTTMIAAFA 246

Query: 195 ------------------------------------------------------------ 254
                                                                       
Sbjct: 247 QCHRLDDAIAFYERDPVKSVATRATIITAYAQMGRIYEARCIFDETPNPNVVMWNAMVAA 306

Query: 255 ---------------------------MIAGLAQNGQSIEALELFAELHRSGTVPNHSSF 314
                                      MI+G  QNG S EALE+FAELHRSG  P+HSSF
Sbjct: 307 YAQNGMLEEAKDIFLHIPMRNTASWAAMISGFVQNGHSREALEVFAELHRSGNFPSHSSF 366

Query: 315 TSAFFACSNVGFVKVD-------------------------------------------- 374
           TSA FACSN+G V+V                                             
Sbjct: 367 TSALFACSNIGDVEVGRQIHSLTIKTKCQFNSFVGNGLISMYGKCKSIEDFSQVFSTMRV 426

Query: 375 KDTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRDM 434
           KD VSWN L+S   ENYMLDDA K FE+MP RDVVSWT +ISAYEQ  + D+AFKLF DM
Sbjct: 427 KDVVSWNSLISRLSENYMLDDAWKFFEKMPNRDVVSWTAVISAYEQAGQGDIAFKLFLDM 486

Query: 435 LSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVC------------- 479
           L+ G +PN+LT++SLLSACA LG  K GEQIH+L YK+G NSCL VC             
Sbjct: 487 LARGMRPNQLTVTSLLSACACLGAAKLGEQIHSLIYKLGFNSCLSVCNALITMYFKCGSL 546

BLAST of HG10023242 vs. ExPASy TrEMBL
Match: A0A2I4GQC2 (pentatricopeptide repeat-containing protein At4g02750-like OS=Juglans regia OX=51240 GN=LOC109009890 PE=3 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 4.9e-117
Identity = 269/741 (36.30%), Postives = 327/741 (44.13%), Query Frame = 0

Query: 74  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
           F++M ERN VSW+ MI+G+ EI ++REAW +F  M+R+G RPDQ+  VVA S +  L+DL
Sbjct: 170 FEKMVERNLVSWLVMISGFSEISKHREAWTIFLMMVRSGVRPDQSVLVVALSAINGLNDL 229

Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNGT-------------------------- 193
           E+LES RT+A+KTGYERDV+VGT++L+ YTRNG+                          
Sbjct: 230 EMLESFRTVAIKTGYERDVVVGTSILDAYTRNGSLDNALKFFETMPKRNDYSWTTMIAAF 289

Query: 194 ------------------------------------------------------------ 253
                                                                       
Sbjct: 290 AQCHRFENAIAFYERDPIKSVATRATIITAYAQKERMYEARRIFDEISNPSVVMWNAMVA 349

Query: 254 ----------------------------MIAGLAQNGQSIEALELFAELHRSGTVPNHSS 313
                                       MI+G  QNGQS EALELFAE HRSG VPNHSS
Sbjct: 350 GYAQNGMLEEAKDIFLHIPERSAASWAAMISGFVQNGQSREALELFAEFHRSGNVPNHSS 409

Query: 314 FTSAFFACSNVGFVKVDK------------------------------------------ 373
           FT+A FAC+N+G  ++ K                                          
Sbjct: 410 FTTALFACTNIGDFEMGKQIHSLTIKTRCQFNSFVGNGLISMYGKYKNIEDVSQVFSTMR 469

Query: 374 --DTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRD 433
             D VSWN L+S   EN+MLDDA+KTFE+MP+RD VSWT IISAYEQ    DVAF LF D
Sbjct: 470 VRDIVSWNSLISRLSENFMLDDARKTFEKMPKRDAVSWTAIISAYEQAGHGDVAFALFLD 529

Query: 434 MLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCL--------------- 479
           ML+ G  PN+LTI+SLLSACAS+G +K G+QIHALT+K+G+NS L               
Sbjct: 530 MLTRGISPNQLTITSLLSACASIGVSKPGQQIHALTHKLGINSSLSVSNALITMYFRCGS 589

BLAST of HG10023242 vs. TAIR 10
Match: AT2G03880.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 283.5 bits (724), Expect = 3.2e-76
Identity = 170/515 (33.01%), Postives = 251/515 (48.74%), Query Frame = 0

Query: 74  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
           FD+M +RN +SW  MI+ Y +   +++A  +   MLR+  RP+  T+     +   + D+
Sbjct: 119 FDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVRPNVYTYSSVLRSCNGMSDV 178

Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNG---------------------TMIAGL 193
            +   L    +K G E DV V +A+++V+ + G                     ++I G 
Sbjct: 179 RM---LHCGIIKEGLESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGF 238

Query: 194 AQNGQSIEALELFAELHRSGTVPNHSSFTSAFFAC-----------SNVGFVKVDKDTVS 253
           AQN +S  ALELF  + R+G +   ++ TS   AC           ++V  VK D+D + 
Sbjct: 239 AQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLIL 298

Query: 254 WNPLVSGFVENYMLDDAQKTFERMPERDVVSWTNIISAYEQTKREDVAFKLFRDMLSLGT 313
            N LV  + +   L+DA + F +M ERDV++W+ +IS   Q      A KLF  M S GT
Sbjct: 299 NNALVDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGT 358

Query: 314 KPNELTISSLLSACASLGTTKHGE------------------------------------ 373
           KPN +TI  +L AC+  G  + G                                     
Sbjct: 359 KPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAV 418

Query: 374 --------QIHALTYKVGLNSC-------------------------LFVCL-------- 433
                   +  A+T++  L +C                          +  L        
Sbjct: 419 KLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQ 478

Query: 434 -WEEVSEIRNMMKNKGVAKEPGVSWIQIKCRVHYFLTKDDSHDEIEEIHSCLKVLLKCLT 479
            W+ V EIR  M+++G+ KEPG SWI++  ++H F+  D+SH +I E+   L  L+  LT
Sbjct: 479 KWDSVEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLT 538

BLAST of HG10023242 vs. TAIR 10
Match: AT2G22070.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 269.2 bits (687), Expect = 6.2e-72
Identity = 162/444 (36.49%), Postives = 235/444 (52.93%), Query Frame = 0

Query: 72  SFFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLD 131
           + F  +++R+ V+W AMI GY + G Y EA  +F  M+  G RP+  T     S  + L 
Sbjct: 368 NIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLA 427

Query: 132 DLELLESLRTMAVKTGYERDVLVGTAVLNVYTRNG----------------------TMI 191
            L   + +   AVK+G    V V  A++ +Y + G                      +MI
Sbjct: 428 SLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMI 487

Query: 192 AGLAQNGQSIEALELFAELHRSGTVPNHSSFTSAFFACSNVGFVK-----------VDK- 251
             LAQ+G + EALELF  +   G  P+H ++   F AC++ G V            VDK 
Sbjct: 488 IALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKI 547

Query: 252 -DTVS-WNPLVSGFVENYMLDDAQKTFERMP-ERDVVSWTNIISAYEQTKREDVAFKLFR 311
             T+S +  +V  F    +L +AQ+  E+MP E DVV+W +++SA    K  D+  K+  
Sbjct: 548 IPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLG-KVAA 607

Query: 312 DMLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVCLWEEVSEIRNM 371
           + L L    N    S+L +  ++ G                         WEE ++IR  
Sbjct: 608 ERLLLLEPENSGAYSALANLYSACGK------------------------WEEAAKIRKS 667

Query: 372 MKNKGVAKEPGVSWIQIKCRVHYFLTKDDSHDEIEEIHSCLKVLLKCLTLAGYVPDTNFV 431
           MK+  V KE G SWI++K +VH F  +D +H E  EI+  +K +   +   GYVPDT  V
Sbjct: 668 MKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASV 727

Query: 432 LHDVEEEQNQDELLYHSEKLAIAYGILHTPNKMPIRIMKNLRICGDCHTFMKFVSQVTQR 479
           LHD+EEE  +  L +HSEKLAIA+G++ TP+K  +RIMKNLR+C DCHT +KF+S++  R
Sbjct: 728 LHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGR 786

BLAST of HG10023242 vs. TAIR 10
Match: AT5G39680.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 256.5 bits (654), Expect = 4.1e-68
Identity = 146/441 (33.11%), Postives = 229/441 (51.93%), Query Frame = 0

Query: 74  FDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLDDL 133
           FD    +N      ++  Y +   + EA  +F  M      P++ TF +  +++  L  L
Sbjct: 295 FDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLL 354

Query: 134 ELLESLRTMAVKTGYERDVLVGTAVLNVYTRNG---------------------TMIAGL 193
           +  + L  + +K+GY   V+VG A++N+Y ++G                     TMI+G 
Sbjct: 355 KQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGSIEDARKAFSGMTFRDIVTWNTMISGC 414

Query: 194 AQNGQSIEALELFAELHRSGTVPNHSSFTSAFFACSNVGFVK--------------VDKD 253
           + +G   EALE F  +  +G +PN  +F     ACS++GFV+              V  D
Sbjct: 415 SHHGLGREALEAFDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPD 474

Query: 254 TVSWNPLVSGFVENYMLDDAQKTFERMP-ERDVVSWTNIISAYEQTKREDVAFKLFRDML 313
              +  +V    +  M  DA+      P E DVV+W  +++A    +   +  K+     
Sbjct: 475 IQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVVAWRTLLNACYVRRNYRLGKKVAE--Y 534

Query: 314 SLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVCLWEEVSEIRNMMKN 373
           ++   PN+  +  LLS             IHA + +           WE V+++R++M N
Sbjct: 535 AIEKYPNDSGVYVLLS------------NIHAKSRE-----------WEGVAKVRSLMNN 594

Query: 374 KGVAKEPGVSWIQIKCRVHYFLTKDDSHDEIEEIHSCLKVLLKCLTLAGYVPDTNFVLHD 433
           +GV KEPGVSWI I+ + H FL +D+ H EI  I++ +K ++  +   GY PD     HD
Sbjct: 595 RGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFHD 654

Query: 434 VEEEQNQDELLYHSEKLAIAYGILHTPNKMPIRIMKNLRICGDCHTFMKFVSQVTQRKII 479
           V+EEQ +D L YHSEKLA+AYG++ TP K P+ + KN+RIC DCH+ +K +S++++R I+
Sbjct: 655 VDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYIV 710

BLAST of HG10023242 vs. TAIR 10
Match: AT4G02750.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 249.2 bits (635), Expect = 6.6e-66
Identity = 157/447 (35.12%), Postives = 232/447 (51.90%), Query Frame = 0

Query: 72  SFFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFWMLRNGARPDQATFVVAFSTVTWLD 131
           + FD+M +R+ VSW AMIAGY + G   EA R+F  M R G R ++++F  A ST   + 
Sbjct: 364 NLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVV 423

Query: 132 DLELLESLRTMAVKTGYERDVLVGTAVLNVYTRNG---------------------TMIA 191
            LEL + L    VK GYE    VG A+L +Y + G                     TMIA
Sbjct: 424 ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIA 483

Query: 192 GLAQNGQSIEALELFAELHRSGTVPNHSSFTSAFFACSNVGFVKVDKD---TVSWNPLVS 251
           G +++G    AL  F  + R G  P+ ++  +   ACS+ G V   +    T++ +  V 
Sbjct: 484 GYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVM 543

Query: 252 GFVENY-----------MLDDAQKTFERMP-ERDVVSWTNIISA---YEQTK-REDVAFK 311
              ++Y           +L+DA    + MP E D   W  ++ A   +  T+  E  A K
Sbjct: 544 PNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADK 603

Query: 312 LFRDMLSLGTKPNELTISSLLSACASLGTTKHGEQIHALTYKVGLNSCLFVCLWEEVSEI 371
           +F        +P    +  LLS             ++A + +           W +V ++
Sbjct: 604 IF------AMEPENSGMYVLLS------------NLYASSGR-----------WGDVGKL 663

Query: 372 RNMMKNKGVAKEPGVSWIQIKCRVHYFLTKDDSHDEIEEIHSCLKVLLKCLTLAGYVPDT 431
           R  M++KGV K PG SWI+I+ + H F   D+ H E +EI + L+ L   +  AGYV  T
Sbjct: 664 RVRMRDKGVKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKT 723

Query: 432 NFVLHDVEEEQNQDELLYHSEKLAIAYGILHTPNKMPIRIMKNLRICGDCHTFMKFVSQV 479
           + VLHDVEEE+ +  + YHSE+LA+AYGI+   +  PIR++KNLR+C DCH  +K+++++
Sbjct: 724 SVVLHDVEEEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARI 781

BLAST of HG10023242 vs. TAIR 10
Match: AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 248.8 bits (634), Expect = 8.6e-66
Identity = 154/543 (28.36%), Postives = 248/543 (45.67%), Query Frame = 0

Query: 48  SKSAVRCFSWEECIVILEWLLRLASFFDRMEERNSVSWMAMIAGYVEIGEYREAWRVFFW 107
           S + +  +S   C+   E L    +F       + V+W AM+AGY +  +  +  ++F  
Sbjct: 455 STALIDAYSRNRCMKEAEILFERHNF-------DLVAWNAMMAGYTQSHDGHKTLKLFAL 514

Query: 108 MLRNGARPDQATFVVAFSTVTWLDDLELLESLRTMAVKTGYERDVLVGTAVLNVYTRNG- 167
           M + G R D  T    F T  +L  +   + +   A+K+GY+ D+ V + +L++Y + G 
Sbjct: 515 MHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGD 574

Query: 168 --------------------TMIAGLAQNGQSIEALELFAELHRSGTVPNHSSFTSAFFA 227
                               TMI+G  +NG+   A  +F+++   G +P+  +  +   A
Sbjct: 575 MSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKA 634

Query: 228 CS-------------NVGFVKVDKDTVSWNPLVSGFVENYMLDDAQKTFERMPERDVVSW 287
            S             N   +    D      LV  + +   +DDA   F+R+   ++ +W
Sbjct: 635 SSCLTALEQGRQIHANALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAW 694

Query: 288 TNIISAYEQTKREDVAFKLFRDMLSLGTKPNELTISSLLSACASLGTT----KHGEQIH- 347
             ++    Q        +LF+ M SLG KP+++T   +LSAC+  G      KH   +H 
Sbjct: 695 NAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHG 754

Query: 348 ---------------------------------------ALTYKVGLNSC---------- 407
                                                  A  Y+  L +C          
Sbjct: 755 DYGIKPEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGK 814

Query: 408 ---------------LFVCL---------WEEVSEIRNMMKNKGVAKEPGVSWIQIKCRV 467
                           +V L         W+E+   R MMK   V K+PG SWI++K ++
Sbjct: 815 RVATKLLELEPLDSSAYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKI 874

Query: 468 HYFLTKDDSHDEIEEIHSCLKVLLKCLTLAGYVPDTNFVLHDVEEEQNQDELLYHSEKLA 479
           H F+  D S+ + E I+  +K +++ +   GYVP+T+F L DVEEE+ +  L YHSEKLA
Sbjct: 875 HIFVVDDRSNRQTELIYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLA 934

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022148556.18.4e-15645.65pentatricopeptide repeat-containing protein At4g02750-like [Momordica charantia][more]
XP_023515085.19.3e-15545.27pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita pepo subsp... [more]
XP_023004730.11.0e-15345.00pentatricopeptide repeat-containing protein At4g02750-like [Cucurbita maxima][more]
KAG7025727.16.7e-15345.14Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
KAG6593380.14.3e-15245.00Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
Match NameE-valueIdentityDescription
Q9SI534.5e-7533.01Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidop... [more]
Q9SHZ88.7e-7136.49Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana OX... [more]
Q9LIQ71.2e-6731.20Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop... [more]
Q9FK935.8e-6733.11Pentatricopeptide repeat-containing protein At5g39680 OS=Arabidopsis thaliana OX... [more]
Q9SY029.3e-6535.12Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana OX... [more]
Match NameE-valueIdentityDescription
A0A6J1D5R54.1e-15645.65pentatricopeptide repeat-containing protein At4g02750-like OS=Momordica charanti... [more]
A0A6J1KVF35.0e-15445.00pentatricopeptide repeat-containing protein At4g02750-like OS=Cucurbita maxima O... [more]
A0A6J1HAB11.3e-14944.32pentatricopeptide repeat-containing protein At4g02750-like OS=Cucurbita moschata... [more]
A0A2N9IF762.7e-12337.97DYW_deaminase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS... [more]
A0A2I4GQC24.9e-11736.30pentatricopeptide repeat-containing protein At4g02750-like OS=Juglans regia OX=5... [more]
Match NameE-valueIdentityDescription
AT2G03880.13.2e-7633.01Pentatricopeptide repeat (PPR) superfamily protein [more]
AT2G22070.16.2e-7236.49pentatricopeptide (PPR) repeat-containing protein [more]
AT5G39680.14.1e-6833.11Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G02750.16.6e-6635.12Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT4G33170.18.6e-6628.36Tetratricopeptide repeat (TPR)-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 213..309
e-value: 1.7E-21
score: 78.4
coord: 132..212
e-value: 2.3E-6
score: 29.0
coord: 49..131
e-value: 4.4E-10
score: 41.2
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 344..467
e-value: 1.4E-40
score: 138.1
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 248..296
e-value: 8.3E-11
score: 41.9
coord: 81..124
e-value: 3.2E-10
score: 40.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 167..192
e-value: 2.9E-4
score: 20.9
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 83..116
e-value: 2.2E-4
score: 19.2
coord: 251..285
e-value: 7.0E-5
score: 20.7
coord: 167..196
e-value: 5.2E-5
score: 21.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 81..115
score: 11.608074
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 249..283
score: 10.873667
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 218..248
score: 9.240434
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 217..317
coord: 325..472
NoneNo IPR availablePANTHERPTHR47924:SF1SUBFAMILY NOT NAMEDcoord: 325..472
coord: 217..317
NoneNo IPR availablePANTHERPTHR47924:SF1SUBFAMILY NOT NAMEDcoord: 167..215
coord: 71..167
NoneNo IPR availablePANTHERPTHR47924PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 167..215
coord: 71..167

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10023242.1HG10023242.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding