Homology
BLAST of HG10023238 vs. NCBI nr
Match:
XP_038896131.1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Benincasa hispida] >XP_038896132.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Benincasa hispida])
HSP 1 Score: 891.3 bits (2302), Expect = 3.4e-255
Identity = 428/461 (92.84%), Postives = 436/461 (94.58%), Query Frame = 0
Query: 1 MLFSFASRRFVPSILSFSDVFLPPATVFFSTKTINPI---------PESRPTQTNFDPPT 60
ML SFASRRF PSI+SFSDVFLPPATVFFSTKTINPI PESR T TNFDPPT
Sbjct: 1 MLLSFASRRFSPSIISFSDVFLPPATVFFSTKTINPIPEFGFKFDSPESRSTHTNFDPPT 60
Query: 61 VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLIHRMQQ 120
VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLIHRMQQ
Sbjct: 61 VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLIHRMQQ 120
Query: 121 SSFALPDHATFRILFKRYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVVE 180
S FA PDHATFRILFKRYA HLVSEAI YERLREFKLRDETSFCNLIDALC+SRHVVE
Sbjct: 121 SPFASPDHATFRILFKRYASGHLVSEAIDVYERLREFKLRDETSFCNLIDALCDSRHVVE 180
Query: 181 AQDLCFGKNRKLDCDASTKIHNLILRGWFKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
AQDLCFGKNRKLDCD+STKIHNL L GW KMGWWSKCREFWEEMDKKGVRKDLHSYSIYM
Sbjct: 181 AQDLCFGKNRKLDCDSSTKIHNLFLHGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
Query: 241 DIQCKSGKPWKAVKLYKEMKKKGLKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK 300
DI CKSGKPWKAVKLYKEMKKKG+KLDVVAYNTVIHAIGISEGVDFASRVFHEMKE+GCK
Sbjct: 241 DILCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEIGCK 300
Query: 301 PNVVTCNTIIKLFCENGRFKDAHVMLDQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDR 360
PNVVTCN IIKLFCE+GRFKDAHVMLDQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDR
Sbjct: 301 PNVVTCNIIIKLFCESGRFKDAHVMLDQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDR 360
Query: 361 MIKFGVHPKVDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALIDALVEKGM 420
MIKFGVHPK+DTYVMLMRKFG+WGFLRPVFLVWNKMEELGCSPNESAYNALIDALVEKGM
Sbjct: 361 MIKFGVHPKMDTYVMLMRKFGKWGFLRPVFLVWNKMEELGCSPNESAYNALIDALVEKGM 420
Query: 421 IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNCNK 453
IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVN NK
Sbjct: 421 IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNSNK 461
BLAST of HG10023238 vs. NCBI nr
Match:
XP_022953157.1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita moschata] >XP_022953158.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita moschata] >XP_022953159.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita moschata])
HSP 1 Score: 878.2 bits (2268), Expect = 3.0e-251
Identity = 422/461 (91.54%), Postives = 433/461 (93.93%), Query Frame = 0
Query: 1 MLFSFASRRFVPSILSFSDVFLPPATVFFSTKTINPI---------PESRPTQTNFDPPT 60
ML SFASRRF PSI SFSDVFLP A + FSTKT NPI PE RPTQTNFDPPT
Sbjct: 18 MLSSFASRRFPPSIFSFSDVFLPAAAILFSTKTTNPISEFGFNFNTPEDRPTQTNFDPPT 77
Query: 61 VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLIHRMQQ 120
VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSW LI RM Q
Sbjct: 78 VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 137
Query: 121 SSFALPDHATFRILFKRYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVVE 180
S FA PDHATFRI+FKRYA AHLVSEAIAAYERLREFKLRDETSFCNLID+LCE RHVVE
Sbjct: 138 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDSLCEYRHVVE 197
Query: 181 AQDLCFGKNRKLDCDASTKIHNLILRGWFKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
AQDLCFGKNRKL+CDASTKIHNLILRGW KMGWWSKCREFWEEMDKKGVRKDLHSYSIYM
Sbjct: 198 AQDLCFGKNRKLNCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 257
Query: 241 DIQCKSGKPWKAVKLYKEMKKKGLKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK 300
DIQCKSGKPWKAVKLYKEMKKKG+KLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK
Sbjct: 258 DIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK 317
Query: 301 PNVVTCNTIIKLFCENGRFKDAHVMLDQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDR 360
PNVVTCNTIIKLFCENGRFKDAH+MLDQMLKKDC PNVITYHCFFRSLEKPKEILMLFDR
Sbjct: 318 PNVVTCNTIIKLFCENGRFKDAHMMLDQMLKKDCLPNVITYHCFFRSLEKPKEILMLFDR 377
Query: 361 MIKFGVHPKVDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALIDALVEKGM 420
MIK+GV PK+DTYVMLMRKFGRWGFLRPVF+VWNKMEELGCSP+ESAYN+LIDALVEKGM
Sbjct: 378 MIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVEKGM 437
Query: 421 IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNCNK 453
IDMARKYDEEMVAKGLSPKLR ELGTKMVNGGYHANVNCNK
Sbjct: 438 IDMARKYDEEMVAKGLSPKLRAELGTKMVNGGYHANVNCNK 478
BLAST of HG10023238 vs. NCBI nr
Match:
KAG7014158.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 877.5 bits (2266), Expect = 5.0e-251
Identity = 422/461 (91.54%), Postives = 432/461 (93.71%), Query Frame = 0
Query: 1 MLFSFASRRFVPSILSFSDVFLPPATVFFSTKTINPIPE---------SRPTQTNFDPPT 60
ML SFASRRF PSI SFSDVFLP A + FSTKT NPI E RPTQTNFDPPT
Sbjct: 1 MLSSFASRRFPPSIFSFSDVFLPAAAILFSTKTTNPISEFGFNFNSRDDRPTQTNFDPPT 60
Query: 61 VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLIHRMQQ 120
VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSW LI RM Q
Sbjct: 61 VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 120
Query: 121 SSFALPDHATFRILFKRYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVVE 180
S FA PDHATFRI+FKRYA AHLVSEAIAAYERLREFKLRDETSFCNLIDALCE RHVVE
Sbjct: 121 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDALCEYRHVVE 180
Query: 181 AQDLCFGKNRKLDCDASTKIHNLILRGWFKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
AQDLCFGKNR L+C ASTKIHNLILRGW KMGWWSKCREFWEEMDKKGVRKDLHSYSIYM
Sbjct: 181 AQDLCFGKNRMLNCGASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
Query: 241 DIQCKSGKPWKAVKLYKEMKKKGLKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK 300
DIQCKSGKPWKAVKLYKEMKKKG+KLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK
Sbjct: 241 DIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK 300
Query: 301 PNVVTCNTIIKLFCENGRFKDAHVMLDQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDR 360
PNVVTCNTIIKLFCENGRFKDAH+MLDQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDR
Sbjct: 301 PNVVTCNTIIKLFCENGRFKDAHMMLDQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDR 360
Query: 361 MIKFGVHPKVDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALIDALVEKGM 420
MIK+GV PK+DTYVMLMRKFGRWGFLRPVF+VWNKMEELGCSP+ESAYN+LIDALVEKGM
Sbjct: 361 MIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVEKGM 420
Query: 421 IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNCNK 453
IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNCNK
Sbjct: 421 IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNCNK 461
BLAST of HG10023238 vs. NCBI nr
Match:
KAG6575615.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 877.5 bits (2266), Expect = 5.0e-251
Identity = 422/461 (91.54%), Postives = 432/461 (93.71%), Query Frame = 0
Query: 1 MLFSFASRRFVPSILSFSDVFLPPATVFFSTKTINPIPE---------SRPTQTNFDPPT 60
ML SFASRRF PSI SFSDVFLP A + FSTKT NPI E RPTQTNFDPPT
Sbjct: 1 MLSSFASRRFPPSIFSFSDVFLPAAAILFSTKTTNPISEFGFNFNSRDDRPTQTNFDPPT 60
Query: 61 VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLIHRMQQ 120
VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSW LI RM Q
Sbjct: 61 VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 120
Query: 121 SSFALPDHATFRILFKRYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVVE 180
S FA PDHATFRI+FKRYA AHLVSEAIAAYERLREFKLRDETSFCNLIDALCE RHVVE
Sbjct: 121 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDALCEYRHVVE 180
Query: 181 AQDLCFGKNRKLDCDASTKIHNLILRGWFKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
AQDLCFGKNR L+C ASTKIHNLILRGW KMGWWSKCREFWEEMDKKGVRKDLHSYSIYM
Sbjct: 181 AQDLCFGKNRMLNCGASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
Query: 241 DIQCKSGKPWKAVKLYKEMKKKGLKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK 300
DIQCKSGKPWKAVKLYKEMKKKG+KLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK
Sbjct: 241 DIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK 300
Query: 301 PNVVTCNTIIKLFCENGRFKDAHVMLDQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDR 360
PNVVTCNTIIKLFCENGRFKDAH+MLDQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDR
Sbjct: 301 PNVVTCNTIIKLFCENGRFKDAHMMLDQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDR 360
Query: 361 MIKFGVHPKVDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALIDALVEKGM 420
MIK+GV PK+DTYVMLMRKFGRWGFLRPVF+VWNKMEELGCSP+ESAYN+LIDALVEKGM
Sbjct: 361 MIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVEKGM 420
Query: 421 IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNCNK 453
IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNCNK
Sbjct: 421 IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNCNK 461
BLAST of HG10023238 vs. NCBI nr
Match:
XP_023547614.1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023547616.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita pepo subsp. pepo])
HSP 1 Score: 873.2 bits (2255), Expect = 9.5e-250
Identity = 420/461 (91.11%), Postives = 430/461 (93.28%), Query Frame = 0
Query: 1 MLFSFASRRFVPSILSFSDVFLPPATVFFSTKTINPI---------PESRPTQTNFDPPT 60
ML SFASRRF PSI SFSDVFLP A + FSTKT NPI PE RPTQTNFDPPT
Sbjct: 18 MLSSFASRRFPPSIFSFSDVFLPAAAILFSTKTTNPISEFGFNFNTPEDRPTQTNFDPPT 77
Query: 61 VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLIHRMQQ 120
VREALDSYCNDWR SYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSW LI RM Q
Sbjct: 78 VREALDSYCNDWRCSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 137
Query: 121 SSFALPDHATFRILFKRYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVVE 180
S FA PDHATFRI+FKRYA AHLVSEAIAAYERLREFKLRDETSFCNLIDALCE RHVVE
Sbjct: 138 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDALCEYRHVVE 197
Query: 181 AQDLCFGKNRKLDCDASTKIHNLILRGWFKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
AQDLCFGKNRKL+C ASTKIHNLILRGW KMGWWSKCREFWEEMDKKGVRKDLHSYSIYM
Sbjct: 198 AQDLCFGKNRKLNCGASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 257
Query: 241 DIQCKSGKPWKAVKLYKEMKKKGLKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK 300
DIQCKSGKPWKAVKLYKEMKKKG+KLDVVAYNTVIHAIGISEGVDFASRVF EMKEMGCK
Sbjct: 258 DIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAIGISEGVDFASRVFQEMKEMGCK 317
Query: 301 PNVVTCNTIIKLFCENGRFKDAHVMLDQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDR 360
PNVVTCNTIIKLFCENGRFKDAH+MLDQMLKKDCPPNVITYHCFFRSLEKP EILMLFDR
Sbjct: 318 PNVVTCNTIIKLFCENGRFKDAHMMLDQMLKKDCPPNVITYHCFFRSLEKPNEILMLFDR 377
Query: 361 MIKFGVHPKVDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALIDALVEKGM 420
MIK+GV PK+DTYVMLMRKFGRWGFLRPVF+VWNKMEELGCSP+ESAYN+LIDALVEKGM
Sbjct: 378 MIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVEKGM 437
Query: 421 IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNCNK 453
IDMARKYDEEMV KGLSPKLREELGTKMVNGGYHANVNCNK
Sbjct: 438 IDMARKYDEEMVVKGLSPKLREELGTKMVNGGYHANVNCNK 478
BLAST of HG10023238 vs. ExPASy Swiss-Prot
Match:
Q9M8M3 (Pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80550 PE=1 SV=1)
HSP 1 Score: 550.4 bits (1417), Expect = 1.8e-155
Identity = 262/427 (61.36%), Postives = 332/427 (77.75%), Query Frame = 0
Query: 23 PPATVFFSTKTINPIPESR------PTQTNFDPPTVREALDSYCNDWRRSYEFFNWVESE 82
P + S K I+ + +++ Q+++D TV EAL Y NDW+++ EFFNWVE E
Sbjct: 15 PYSVRLLSVKPISNVDDAKFRSQEEEDQSSYDQKTVCEALTCYSNDWQKALEFFNWVERE 74
Query: 83 CKFDHTTETYNRMLDILGKFFEFDLSWVLIHRMQQSSFALPDHATFRILFKRYALAHLVS 142
F HTTET+NR++DILGK+FEF++SW LI+RM ++ ++P+H TFRI+FKRY AHLV
Sbjct: 75 SGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQ 134
Query: 143 EAIAAYERLREFKLRDETSFCNLIDALCESRHVVEAQDLCFGKN--RKLDCDASTKIHNL 202
EAI AY++L +F LRDETSF NL+DALCE +HVVEA++LCFGKN ++TKIHNL
Sbjct: 135 EAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNL 194
Query: 203 ILRGWFKMGWWSKCREFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLYKEMKKKG 262
ILRGW K+GWW KC+E+W++MD +GV KDL SYSIYMDI CKSGKPWKAVKLYKEMK +
Sbjct: 195 ILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRR 254
Query: 263 LKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCKPNVVTCNTIIKLFCENGRFKDAH 322
+KLDVVAYNTVI AIG S+GV+F RVF EM+E GC+PNV T NTIIKL CE+GR +DA+
Sbjct: 255 MKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAY 314
Query: 323 VMLDQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDRMIKFGVHPKVDTYVMLMRKFGRW 382
MLD+M K+ C P+ ITY C F LEKP EIL LF RMI+ GV PK+DTYVMLMRKF RW
Sbjct: 315 RMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERW 374
Query: 383 GFLRPVFLVWNKMEELGCSPNESAYNALIDALVEKGMIDMARKYDEEMVAKGLSPKLREE 442
GFL+PV VW M+E G +P+ +AYNA+IDAL++KGM+DMAR+Y+EEM+ +GLSP+ R E
Sbjct: 375 GFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRRRPE 434
BLAST of HG10023238 vs. ExPASy Swiss-Prot
Match:
Q9LFQ4 (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15010 PE=2 SV=2)
HSP 1 Score: 230.3 bits (586), Expect = 4.2e-59
Identity = 134/381 (35.17%), Postives = 202/381 (53.02%), Query Frame = 0
Query: 52 VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLIHRMQQ 111
V E L NDW ++ FF W + + + Y+ M+ ILGK +FD +W LI M++
Sbjct: 130 VVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRK 189
Query: 112 SSFALPDHATFRILFKRYALAHLVSEAIAAYERLREFKLR-DETSFCNLIDALCESRHVV 171
S +L + T I+ ++Y H V +AI + + FKL F +L+ ALC ++V
Sbjct: 190 FSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVS 249
Query: 172 EAQDLCFGKNRKLDCDASTKIHNLILRGWFK-MGWWSKCREFWEEMDKKGVRKDLHSYSI 231
+A L F K DA K N++L GW +G + W EM GV+ D+ SYS
Sbjct: 250 DAGHLIFCNKDKYPFDA--KSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSS 309
Query: 232 YMDIQCKSGKPWKAVKLYKEMKKKGLKLDVVAYNTVIHAIGISEGVDFASRVFHEM-KEM 291
+ K G K +KL+ MKK+ ++ D YN V+HA+ + V A + M +E
Sbjct: 310 MISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEK 369
Query: 292 GCKPNVVTCNTIIKLFCENGRFKDAHVMLDQMLKKDCPPNVITYHCFFRSLEKPKEILML 351
G +PNVVT N++IK C+ + ++A + D+ML+K P + TYH F R L +E+ L
Sbjct: 370 GIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFEL 429
Query: 352 FDRMIKFGVHPKVDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALIDALVE 411
+M K G P V+TY+ML+RK RW V L+W++M+E P+ S+Y +I L
Sbjct: 430 LAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFL 489
Query: 412 KGMIDMARKYDEEMVAKGLSP 430
G I+ A Y +EM KG+ P
Sbjct: 490 NGKIEEAYGYYKEMKDKGMRP 508
BLAST of HG10023238 vs. ExPASy Swiss-Prot
Match:
Q9LIL5 (Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis thaliana OX=3702 GN=At3g15200 PE=3 SV=1)
HSP 1 Score: 197.2 bits (500), Expect = 4.0e-49
Identity = 118/387 (30.49%), Postives = 196/387 (50.65%), Query Frame = 0
Query: 52 VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLIHRMQQ 111
V E ++ +DW+ +Y V + ++ YN +LD+LGK F+ + M +
Sbjct: 112 VLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSK 171
Query: 112 SSFALPDHATFRILFKRYALAHLVSEAIAAYERLREFKLRDE-TSFCNLIDALCESRHVV 171
+ T+ +L RYA AH V EA+ +ER +EF + D+ +F L+ LC +HV
Sbjct: 172 RD-GFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVE 231
Query: 172 EAQDLCFGKNRKLDCDASTKIHNLILRGWFKMGWWSKCREFWEEMDKKGVRKDLHSYSIY 231
A+ L + R+ CD K N+IL GW +G + + FW+++ R D+ SY
Sbjct: 232 FAETLFCSRRREFGCD--IKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTM 291
Query: 232 MDIQCKSGKPWKAVKLYKEMKKKGLKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGC 291
++ K GK KA++LY+ M DV N VI A+ + + A VF E+ E G
Sbjct: 292 INALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGP 351
Query: 292 KPNVVTCNTIIKLFCENGRFKDAHVMLDQMLKK--DCPPNVITYHCFFRSLEKPKEILML 351
PNVVT N+++K C+ R + ++++M K C PN +T+ + ++ K++ ++
Sbjct: 352 DPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIV 411
Query: 352 FDRMIKFGVHPKVDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALIDALVE 411
+RM K D Y ++ R + +W V +W++ME G P++ Y I L
Sbjct: 412 LERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHT 471
Query: 412 KGMIDMARKYDEEMVAKGLSPKLREEL 436
KG I A Y +EM++KG+ P+ R E+
Sbjct: 472 KGKIGEALSYFQEMMSKGMVPEPRTEM 495
BLAST of HG10023238 vs. ExPASy Swiss-Prot
Match:
Q9SSR6 (Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g52640 PE=2 SV=1)
HSP 1 Score: 182.6 bits (462), Expect = 1.0e-44
Identity = 113/372 (30.38%), Postives = 192/372 (51.61%), Query Frame = 0
Query: 66 SYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLIHRMQQSSFALPDHATFRIL 125
++ FF W F H+ E+Y+ +++ILG +F L W + ++ ++ F I+
Sbjct: 85 AHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIV 144
Query: 126 FKRYALAHLVSEAIAAYERLREFKLRD-ETSFCNLIDALCESRHVVEAQDLCFGKNRKLD 185
F+ Y+ A+L SEA A+ R+ EF ++ L+ +LC+ +HV AQ+ FGK +
Sbjct: 145 FRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEF-FGKAKGFG 204
Query: 186 CDASTKIHNLILRGWFKMGWWSKCREFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAV 245
S K +++++RGW ++ S R+ ++EM ++ DL +Y+ +D CKSG
Sbjct: 205 IVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGY 264
Query: 246 KLYKEMKKKGLKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCKPNVVTCNTIIKLF 305
K+++EM GLK D ++ IHA + V A +V MK PNV T N IIK
Sbjct: 265 KMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTL 324
Query: 306 CENGRFKDAHVMLDQMLKKDCPP------NVITYHCFFRSLEKPKEILMLFDRMIKFGVH 365
C+N + DA+++LD+M++K P +++ YHC + + ++L RM +
Sbjct: 325 CKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLL---SRMDRTKCL 384
Query: 366 PKVDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALIDALV-EKGMIDMARK 425
P TY M+++ R G +W M E P + Y +I LV +KG ++ A +
Sbjct: 385 PDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACR 444
Query: 426 YDEEMVAKGLSP 430
Y E M+ +G+ P
Sbjct: 445 YFEMMIDEGIPP 452
BLAST of HG10023238 vs. ExPASy Swiss-Prot
Match:
Q9C9A2 (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1)
HSP 1 Score: 179.1 bits (453), Expect = 1.1e-43
Identity = 111/385 (28.83%), Postives = 190/385 (49.35%), Query Frame = 0
Query: 49 PPTVREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLIHR 108
P + E L N + F W E++ F HTT YN +++ LGK +F L W L+
Sbjct: 94 PALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDD 153
Query: 109 MQQSSFALPDHATFRILFKRYALAHLVSEAIAAYERLREFKLRDETS-FCNLIDALCESR 168
M+ L TF ++ +RYA A V EAI A+ ++ EF + E+S F ++D L +SR
Sbjct: 154 MKAKK--LLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSR 213
Query: 169 HVVEAQDLCFGKNRKLDCDASTKIHNLILRGWFKMGWWSKCREFWEEMDKKGVRKDLHSY 228
+V +AQ + F K +K + K + ++L GW + + E EM +G D+ +Y
Sbjct: 214 NVGDAQKV-FDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAY 273
Query: 229 SIYMDIQCKSGKPWKAVKLYKEMKKKGLKLDVVAYNTVIHAIGISEGVDFASRVFHEMKE 288
I ++ CK+ K +A++ + EM+++ K + ++I+ +G + ++ A F K
Sbjct: 274 GIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKS 333
Query: 289 MGCKPNVVTCNTIIKLFCENGRFKDAHVMLDQMLKKDCPPNVITYHCFFRSL---EKPKE 348
G T N ++ +C + R +DA+ +D+M K PN TY L ++ KE
Sbjct: 334 SGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKE 393
Query: 349 ILMLFDRMIKFGVHPKVDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALID 408
++ M P V TY +++R F L +W++M+ G P +++LI
Sbjct: 394 AYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLIT 453
Query: 409 ALVEKGMIDMARKYDEEMVAKGLSP 430
AL + +D A +Y EM+ G+ P
Sbjct: 454 ALCHENKLDEACEYFNEMLDVGIRP 472
BLAST of HG10023238 vs. ExPASy TrEMBL
Match:
A0A6J1GNU3 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111455781 PE=4 SV=1)
HSP 1 Score: 878.2 bits (2268), Expect = 1.4e-251
Identity = 422/461 (91.54%), Postives = 433/461 (93.93%), Query Frame = 0
Query: 1 MLFSFASRRFVPSILSFSDVFLPPATVFFSTKTINPI---------PESRPTQTNFDPPT 60
ML SFASRRF PSI SFSDVFLP A + FSTKT NPI PE RPTQTNFDPPT
Sbjct: 18 MLSSFASRRFPPSIFSFSDVFLPAAAILFSTKTTNPISEFGFNFNTPEDRPTQTNFDPPT 77
Query: 61 VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLIHRMQQ 120
VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSW LI RM Q
Sbjct: 78 VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 137
Query: 121 SSFALPDHATFRILFKRYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVVE 180
S FA PDHATFRI+FKRYA AHLVSEAIAAYERLREFKLRDETSFCNLID+LCE RHVVE
Sbjct: 138 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDSLCEYRHVVE 197
Query: 181 AQDLCFGKNRKLDCDASTKIHNLILRGWFKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
AQDLCFGKNRKL+CDASTKIHNLILRGW KMGWWSKCREFWEEMDKKGVRKDLHSYSIYM
Sbjct: 198 AQDLCFGKNRKLNCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 257
Query: 241 DIQCKSGKPWKAVKLYKEMKKKGLKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK 300
DIQCKSGKPWKAVKLYKEMKKKG+KLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK
Sbjct: 258 DIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK 317
Query: 301 PNVVTCNTIIKLFCENGRFKDAHVMLDQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDR 360
PNVVTCNTIIKLFCENGRFKDAH+MLDQMLKKDC PNVITYHCFFRSLEKPKEILMLFDR
Sbjct: 318 PNVVTCNTIIKLFCENGRFKDAHMMLDQMLKKDCLPNVITYHCFFRSLEKPKEILMLFDR 377
Query: 361 MIKFGVHPKVDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALIDALVEKGM 420
MIK+GV PK+DTYVMLMRKFGRWGFLRPVF+VWNKMEELGCSP+ESAYN+LIDALVEKGM
Sbjct: 378 MIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVEKGM 437
Query: 421 IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNCNK 453
IDMARKYDEEMVAKGLSPKLR ELGTKMVNGGYHANVNCNK
Sbjct: 438 IDMARKYDEEMVAKGLSPKLRAELGTKMVNGGYHANVNCNK 478
BLAST of HG10023238 vs. ExPASy TrEMBL
Match:
A0A6J1JMZ1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111488358 PE=4 SV=1)
HSP 1 Score: 872.5 bits (2253), Expect = 7.8e-250
Identity = 420/461 (91.11%), Postives = 430/461 (93.28%), Query Frame = 0
Query: 1 MLFSFASRRFVPSILSFSDVFLPPATVFFSTKTINPI---------PESRPTQTNFDPPT 60
ML SFASRRF PSI SFSDVFLP A + FSTKT NPI PE RPTQTNFDPPT
Sbjct: 18 MLSSFASRRFSPSIFSFSDVFLPAAAILFSTKTTNPISVFGFNFNTPEDRPTQTNFDPPT 77
Query: 61 VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLIHRMQQ 120
VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSW LI RM Q
Sbjct: 78 VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWELIQRMLQ 137
Query: 121 SSFALPDHATFRILFKRYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVVE 180
S FA PDHATFRI+FKRYA AHLVSEAIAAYERLREFKLRDETSFCNLIDALCE RHVVE
Sbjct: 138 SPFASPDHATFRIMFKRYASAHLVSEAIAAYERLREFKLRDETSFCNLIDALCEYRHVVE 197
Query: 181 AQDLCFGKNRKLDCDASTKIHNLILRGWFKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
AQDLCFGKNRKL+CDASTKIHNLILRGW KMGWWSKCREFWEEMDKKGVRKDLHSYSIYM
Sbjct: 198 AQDLCFGKNRKLNCDASTKIHNLILRGWLKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 257
Query: 241 DIQCKSGKPWKAVKLYKEMKKKGLKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK 300
DIQCKSGKPWKAVKLYKEMKKKG+KLDVVAYNTVIHAIGISEGVDFASRVF EMKEMGCK
Sbjct: 258 DIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAIGISEGVDFASRVFQEMKEMGCK 317
Query: 301 PNVVTCNTIIKLFCENGRFKDAHVMLDQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDR 360
PNVVTCNTIIKLFCENGRFKDAH ML QMLKKDCPPNVITYHCFFRSLEKPKEILMLFDR
Sbjct: 318 PNVVTCNTIIKLFCENGRFKDAHKMLHQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDR 377
Query: 361 MIKFGVHPKVDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALIDALVEKGM 420
MIK+GV PK+DTYVMLMRKFGRWGFLRPVF+VWNKMEELGCSP+ESAYN+LIDALVEKGM
Sbjct: 378 MIKYGVQPKMDTYVMLMRKFGRWGFLRPVFVVWNKMEELGCSPDESAYNSLIDALVEKGM 437
Query: 421 IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNCNK 453
ID ARKYDEEMVAKGLSPKLR ELGT+MVNGGYHANVNCNK
Sbjct: 438 IDRARKYDEEMVAKGLSPKLRAELGTEMVNGGYHANVNCNK 478
BLAST of HG10023238 vs. ExPASy TrEMBL
Match:
A0A6J1D599 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111017413 PE=4 SV=1)
HSP 1 Score: 868.2 bits (2242), Expect = 1.5e-248
Identity = 416/461 (90.24%), Postives = 429/461 (93.06%), Query Frame = 0
Query: 1 MLFSFASRRFVPSILSFSDVFLPPATVFFSTKTINPI---------PESRPTQTNFDPPT 60
ML S ASRRF P ILSFS+V LPP + FSTKT PI PE RP QTNFDP T
Sbjct: 1 MLSSLASRRFPPFILSFSEVLLPPGNLLFSTKTAAPISELDCKFNSPERRPVQTNFDPST 60
Query: 61 VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLIHRMQQ 120
VREALDSYCNDWRRS+EFFNWVESECKFDHTTETYNRMLDILGKFFEFD+SWVL+ RMQQ
Sbjct: 61 VREALDSYCNDWRRSFEFFNWVESECKFDHTTETYNRMLDILGKFFEFDISWVLVQRMQQ 120
Query: 121 SSFALPDHATFRILFKRYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVVE 180
S+FA PDHATFRILFKRYA AHLV+EAIAAYER REFKLRDETSFCNLIDALCE RHVVE
Sbjct: 121 SAFASPDHATFRILFKRYASAHLVTEAIAAYERSREFKLRDETSFCNLIDALCEYRHVVE 180
Query: 181 AQDLCFGKNRKLDCDASTKIHNLILRGWFKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
AQDLCFGKN+K+DC+ASTKIHNLILRGW KMGWWSKCREFWEEMD KGVRKDLHSYSIYM
Sbjct: 181 AQDLCFGKNKKVDCNASTKIHNLILRGWLKMGWWSKCREFWEEMDNKGVRKDLHSYSIYM 240
Query: 241 DIQCKSGKPWKAVKLYKEMKKKGLKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK 300
DIQCKSGKPWKAVKLYKEMKKKG+KLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK
Sbjct: 241 DIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK 300
Query: 301 PNVVTCNTIIKLFCENGRFKDAHVMLDQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDR 360
PNVVTCNTIIKLFCENGRFKDAHVMLDQMLKKDCPPNVITYHCFFRS EKP EILMLFDR
Sbjct: 301 PNVVTCNTIIKLFCENGRFKDAHVMLDQMLKKDCPPNVITYHCFFRSFEKPNEILMLFDR 360
Query: 361 MIKFGVHPKVDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALIDALVEKGM 420
MIKFGVHPK+DTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALIDALVEKGM
Sbjct: 361 MIKFGVHPKMDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALIDALVEKGM 420
Query: 421 IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNCNK 453
IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANV CN+
Sbjct: 421 IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVICNE 461
BLAST of HG10023238 vs. ExPASy TrEMBL
Match:
A0A1S3CFA1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103499823 PE=4 SV=1)
HSP 1 Score: 856.7 bits (2212), Expect = 4.5e-245
Identity = 409/461 (88.72%), Postives = 428/461 (92.84%), Query Frame = 0
Query: 1 MLFSFASRRFVPSILSFSDVFLPPATVFFSTKTINPIP---------ESRPTQTNFDPPT 60
MLFSFASRR FLPPAT+FFSTKTINPIP E RPT NFDP T
Sbjct: 1 MLFSFASRR-----------FLPPATIFFSTKTINPIPEFDFKFNTSERRPTHANFDPST 60
Query: 61 VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLIHRMQQ 120
VREALDSYCNDW+RSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLI+RM+Q
Sbjct: 61 VREALDSYCNDWKRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLINRMRQ 120
Query: 121 SSFALPDHATFRILFKRYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVVE 180
S FA PDH TFRILFKRYA AHLV+EAIAAYERLREFKLRDETSFCNLIDALCESRHV E
Sbjct: 121 SPFAPPDHTTFRILFKRYAAAHLVTEAIAAYERLREFKLRDETSFCNLIDALCESRHVDE 180
Query: 181 AQDLCFGKNRKLDCDASTKIHNLILRGWFKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
AQ+LCFGKNR+LDCD+STKIHNLILRGW KMGWWSKCR+FWEEMDKKGVRKDLHSYSIYM
Sbjct: 181 AQELCFGKNRRLDCDSSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYM 240
Query: 241 DIQCKSGKPWKAVKLYKEMKKKGLKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK 300
DIQCKSGKPWKAVKLYKEMK+KG+KLDVVAYNTVIHA+GISEGVDFASRVFHEMKEMGCK
Sbjct: 241 DIQCKSGKPWKAVKLYKEMKQKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCK 300
Query: 301 PNVVTCNTIIKLFCENGRFKDAHVMLDQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDR 360
PNVVTCNT+IKLFCENGRFKDAH+MLDQMLK+DC PNVITYHCFFRSLEKPKEIL+LFDR
Sbjct: 301 PNVVTCNTVIKLFCENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILILFDR 360
Query: 361 MIKFGVHPKVDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALIDALVEKGM 420
MIK+GVHPK+DTYVML+RKFGRWGFLRPVFLVWNKMEELGCSPNE AYNALIDALVEKGM
Sbjct: 361 MIKYGVHPKMDTYVMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGM 420
Query: 421 IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNCNK 453
IDMARKYDEEMVAKGLSPKLR ELGTKMVNGGYHANVNCNK
Sbjct: 421 IDMARKYDEEMVAKGLSPKLRVELGTKMVNGGYHANVNCNK 450
BLAST of HG10023238 vs. ExPASy TrEMBL
Match:
A0A5A7UVK9 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G001970 PE=4 SV=1)
HSP 1 Score: 854.7 bits (2207), Expect = 1.7e-244
Identity = 408/461 (88.50%), Postives = 428/461 (92.84%), Query Frame = 0
Query: 1 MLFSFASRRFVPSILSFSDVFLPPATVFFSTKTINPIP---------ESRPTQTNFDPPT 60
MLFSFASRR FLPPAT+FFSTKTINPIP E RPT NFDP T
Sbjct: 1 MLFSFASRR-----------FLPPATIFFSTKTINPIPEFDFKFNTSERRPTHANFDPST 60
Query: 61 VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLIHRMQQ 120
VREALDSYCNDW+RSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLI+RM+Q
Sbjct: 61 VREALDSYCNDWKRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLINRMRQ 120
Query: 121 SSFALPDHATFRILFKRYALAHLVSEAIAAYERLREFKLRDETSFCNLIDALCESRHVVE 180
S FA PDH TFRILFKRYA AHLV+EAIAAYERLREFKLRDETSFCNLIDALCESRHV E
Sbjct: 121 SPFAPPDHTTFRILFKRYASAHLVTEAIAAYERLREFKLRDETSFCNLIDALCESRHVDE 180
Query: 181 AQDLCFGKNRKLDCDASTKIHNLILRGWFKMGWWSKCREFWEEMDKKGVRKDLHSYSIYM 240
AQ+LCFGKNR+LDCD+STKIHNLILRGW KMGWWSKCR+FWEEMDKKGVRKDLHSYSIYM
Sbjct: 181 AQELCFGKNRRLDCDSSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYM 240
Query: 241 DIQCKSGKPWKAVKLYKEMKKKGLKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCK 300
DI+CKSGKPWKAVKLYKEMK+KG+KLDVVAYNTVIHA+GISEGVDFASRVFHEMKEMGCK
Sbjct: 241 DIRCKSGKPWKAVKLYKEMKQKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCK 300
Query: 301 PNVVTCNTIIKLFCENGRFKDAHVMLDQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDR 360
PNVVTCNT+IKLFCENGRFKDAH+MLDQMLK+DC PNVITYHCFFRSLEKPKEIL+LFDR
Sbjct: 301 PNVVTCNTVIKLFCENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILILFDR 360
Query: 361 MIKFGVHPKVDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALIDALVEKGM 420
MIK+GVHPK+DTYVML+RKFGRWGFLRPVFLVWNKMEELGCSPNE AYNALIDALVEKGM
Sbjct: 361 MIKYGVHPKMDTYVMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGM 420
Query: 421 IDMARKYDEEMVAKGLSPKLREELGTKMVNGGYHANVNCNK 453
IDMARKYDEEMVAKGLSPKLR ELGTKMVNGGYHANVNCNK
Sbjct: 421 IDMARKYDEEMVAKGLSPKLRVELGTKMVNGGYHANVNCNK 450
BLAST of HG10023238 vs. TAIR 10
Match:
AT1G80550.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 550.4 bits (1417), Expect = 1.3e-156
Identity = 262/427 (61.36%), Postives = 332/427 (77.75%), Query Frame = 0
Query: 23 PPATVFFSTKTINPIPESR------PTQTNFDPPTVREALDSYCNDWRRSYEFFNWVESE 82
P + S K I+ + +++ Q+++D TV EAL Y NDW+++ EFFNWVE E
Sbjct: 15 PYSVRLLSVKPISNVDDAKFRSQEEEDQSSYDQKTVCEALTCYSNDWQKALEFFNWVERE 74
Query: 83 CKFDHTTETYNRMLDILGKFFEFDLSWVLIHRMQQSSFALPDHATFRILFKRYALAHLVS 142
F HTTET+NR++DILGK+FEF++SW LI+RM ++ ++P+H TFRI+FKRY AHLV
Sbjct: 75 SGFRHTTETFNRVIDILGKYFEFEISWALINRMIGNTESVPNHVTFRIVFKRYVTAHLVQ 134
Query: 143 EAIAAYERLREFKLRDETSFCNLIDALCESRHVVEAQDLCFGKN--RKLDCDASTKIHNL 202
EAI AY++L +F LRDETSF NL+DALCE +HVVEA++LCFGKN ++TKIHNL
Sbjct: 135 EAIDAYDKLDDFNLRDETSFYNLVDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNL 194
Query: 203 ILRGWFKMGWWSKCREFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLYKEMKKKG 262
ILRGW K+GWW KC+E+W++MD +GV KDL SYSIYMDI CKSGKPWKAVKLYKEMK +
Sbjct: 195 ILRGWSKLGWWGKCKEYWKKMDTEGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRR 254
Query: 263 LKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCKPNVVTCNTIIKLFCENGRFKDAH 322
+KLDVVAYNTVI AIG S+GV+F RVF EM+E GC+PNV T NTIIKL CE+GR +DA+
Sbjct: 255 MKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAY 314
Query: 323 VMLDQMLKKDCPPNVITYHCFFRSLEKPKEILMLFDRMIKFGVHPKVDTYVMLMRKFGRW 382
MLD+M K+ C P+ ITY C F LEKP EIL LF RMI+ GV PK+DTYVMLMRKF RW
Sbjct: 315 RMLDEMPKRGCQPDSITYMCLFSRLEKPSEILSLFGRMIRSGVRPKMDTYVMLMRKFERW 374
Query: 383 GFLRPVFLVWNKMEELGCSPNESAYNALIDALVEKGMIDMARKYDEEMVAKGLSPKLREE 442
GFL+PV VW M+E G +P+ +AYNA+IDAL++KGM+DMAR+Y+EEM+ +GLSP+ R E
Sbjct: 375 GFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGMLDMAREYEEEMIERGLSPRRRPE 434
BLAST of HG10023238 vs. TAIR 10
Match:
AT5G15010.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 230.3 bits (586), Expect = 3.0e-60
Identity = 134/381 (35.17%), Postives = 202/381 (53.02%), Query Frame = 0
Query: 52 VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLIHRMQQ 111
V E L NDW ++ FF W + + + Y+ M+ ILGK +FD +W LI M++
Sbjct: 130 VVEILSRVRNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRK 189
Query: 112 SSFALPDHATFRILFKRYALAHLVSEAIAAYERLREFKLR-DETSFCNLIDALCESRHVV 171
S +L + T I+ ++Y H V +AI + + FKL F +L+ ALC ++V
Sbjct: 190 FSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVS 249
Query: 172 EAQDLCFGKNRKLDCDASTKIHNLILRGWFK-MGWWSKCREFWEEMDKKGVRKDLHSYSI 231
+A L F K DA K N++L GW +G + W EM GV+ D+ SYS
Sbjct: 250 DAGHLIFCNKDKYPFDA--KSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSS 309
Query: 232 YMDIQCKSGKPWKAVKLYKEMKKKGLKLDVVAYNTVIHAIGISEGVDFASRVFHEM-KEM 291
+ K G K +KL+ MKK+ ++ D YN V+HA+ + V A + M +E
Sbjct: 310 MISCYSKGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEK 369
Query: 292 GCKPNVVTCNTIIKLFCENGRFKDAHVMLDQMLKKDCPPNVITYHCFFRSLEKPKEILML 351
G +PNVVT N++IK C+ + ++A + D+ML+K P + TYH F R L +E+ L
Sbjct: 370 GIEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMRILRTGEEVFEL 429
Query: 352 FDRMIKFGVHPKVDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALIDALVE 411
+M K G P V+TY+ML+RK RW V L+W++M+E P+ S+Y +I L
Sbjct: 430 LAKMRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFL 489
Query: 412 KGMIDMARKYDEEMVAKGLSP 430
G I+ A Y +EM KG+ P
Sbjct: 490 NGKIEEAYGYYKEMKDKGMRP 508
BLAST of HG10023238 vs. TAIR 10
Match:
AT3G15200.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 197.2 bits (500), Expect = 2.8e-50
Identity = 118/387 (30.49%), Postives = 196/387 (50.65%), Query Frame = 0
Query: 52 VREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLIHRMQQ 111
V E ++ +DW+ +Y V + ++ YN +LD+LGK F+ + M +
Sbjct: 112 VLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILDVLGKMRRFEEFHQVFDEMSK 171
Query: 112 SSFALPDHATFRILFKRYALAHLVSEAIAAYERLREFKLRDE-TSFCNLIDALCESRHVV 171
+ T+ +L RYA AH V EA+ +ER +EF + D+ +F L+ LC +HV
Sbjct: 172 RD-GFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGIDDDLVAFHGLLMWLCRYKHVE 231
Query: 172 EAQDLCFGKNRKLDCDASTKIHNLILRGWFKMGWWSKCREFWEEMDKKGVRKDLHSYSIY 231
A+ L + R+ CD K N+IL GW +G + + FW+++ R D+ SY
Sbjct: 232 FAETLFCSRRREFGCD--IKAMNMILNGWCVLGNVHEAKRFWKDIIASKCRPDVVSYGTM 291
Query: 232 MDIQCKSGKPWKAVKLYKEMKKKGLKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGC 291
++ K GK KA++LY+ M DV N VI A+ + + A VF E+ E G
Sbjct: 292 INALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFKKRIPEALEVFREISEKGP 351
Query: 292 KPNVVTCNTIIKLFCENGRFKDAHVMLDQMLKK--DCPPNVITYHCFFRSLEKPKEILML 351
PNVVT N+++K C+ R + ++++M K C PN +T+ + ++ K++ ++
Sbjct: 352 DPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDVTFSYLLKYSQRSKDVDIV 411
Query: 352 FDRMIKFGVHPKVDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALIDALVE 411
+RM K D Y ++ R + +W V +W++ME G P++ Y I L
Sbjct: 412 LERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEMERSGLGPDQRTYTIRIHGLHT 471
Query: 412 KGMIDMARKYDEEMVAKGLSPKLREEL 436
KG I A Y +EM++KG+ P+ R E+
Sbjct: 472 KGKIGEALSYFQEMMSKGMVPEPRTEM 495
BLAST of HG10023238 vs. TAIR 10
Match:
AT1G52640.1 (Pentatricopeptide repeat (PPR) superfamily protein )
HSP 1 Score: 182.6 bits (462), Expect = 7.2e-46
Identity = 113/372 (30.38%), Postives = 192/372 (51.61%), Query Frame = 0
Query: 66 SYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLIHRMQQSSFALPDHATFRIL 125
++ FF W F H+ E+Y+ +++ILG +F L W + ++ ++ F I+
Sbjct: 85 AHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIV 144
Query: 126 FKRYALAHLVSEAIAAYERLREFKLRD-ETSFCNLIDALCESRHVVEAQDLCFGKNRKLD 185
F+ Y+ A+L SEA A+ R+ EF ++ L+ +LC+ +HV AQ+ FGK +
Sbjct: 145 FRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEF-FGKAKGFG 204
Query: 186 CDASTKIHNLILRGWFKMGWWSKCREFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAV 245
S K +++++RGW ++ S R+ ++EM ++ DL +Y+ +D CKSG
Sbjct: 205 IVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGY 264
Query: 246 KLYKEMKKKGLKLDVVAYNTVIHAIGISEGVDFASRVFHEMKEMGCKPNVVTCNTIIKLF 305
K+++EM GLK D ++ IHA + V A +V MK PNV T N IIK
Sbjct: 265 KMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTL 324
Query: 306 CENGRFKDAHVMLDQMLKKDCPP------NVITYHCFFRSLEKPKEILMLFDRMIKFGVH 365
C+N + DA+++LD+M++K P +++ YHC + + ++L RM +
Sbjct: 325 CKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLL---SRMDRTKCL 384
Query: 366 PKVDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALIDALV-EKGMIDMARK 425
P TY M+++ R G +W M E P + Y +I LV +KG ++ A +
Sbjct: 385 PDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACR 444
Query: 426 YDEEMVAKGLSP 430
Y E M+ +G+ P
Sbjct: 445 YFEMMIDEGIPP 452
BLAST of HG10023238 vs. TAIR 10
Match:
AT1G71060.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 179.1 bits (453), Expect = 8.0e-45
Identity = 111/385 (28.83%), Postives = 190/385 (49.35%), Query Frame = 0
Query: 49 PPTVREALDSYCNDWRRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLIHR 108
P + E L N + F W E++ F HTT YN +++ LGK +F L W L+
Sbjct: 94 PALIEEVLKKLSNAGVLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDD 153
Query: 109 MQQSSFALPDHATFRILFKRYALAHLVSEAIAAYERLREFKLRDETS-FCNLIDALCESR 168
M+ L TF ++ +RYA A V EAI A+ ++ EF + E+S F ++D L +SR
Sbjct: 154 MKAKK--LLSKETFALISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSR 213
Query: 169 HVVEAQDLCFGKNRKLDCDASTKIHNLILRGWFKMGWWSKCREFWEEMDKKGVRKDLHSY 228
+V +AQ + F K +K + K + ++L GW + + E EM +G D+ +Y
Sbjct: 214 NVGDAQKV-FDKMKKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAY 273
Query: 229 SIYMDIQCKSGKPWKAVKLYKEMKKKGLKLDVVAYNTVIHAIGISEGVDFASRVFHEMKE 288
I ++ CK+ K +A++ + EM+++ K + ++I+ +G + ++ A F K
Sbjct: 274 GIIINAHCKAKKYEEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKS 333
Query: 289 MGCKPNVVTCNTIIKLFCENGRFKDAHVMLDQMLKKDCPPNVITYHCFFRSL---EKPKE 348
G T N ++ +C + R +DA+ +D+M K PN TY L ++ KE
Sbjct: 334 SGFPLEAPTYNALVGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKE 393
Query: 349 ILMLFDRMIKFGVHPKVDTYVMLMRKFGRWGFLRPVFLVWNKMEELGCSPNESAYNALID 408
++ M P V TY +++R F L +W++M+ G P +++LI
Sbjct: 394 AYEVYQTM---SCEPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLIT 453
Query: 409 ALVEKGMIDMARKYDEEMVAKGLSP 430
AL + +D A +Y EM+ G+ P
Sbjct: 454 ALCHENKLDEACEYFNEMLDVGIRP 472
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038896131.1 | 3.4e-255 | 92.84 | pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Benincasa ... | [more] |
XP_022953157.1 | 3.0e-251 | 91.54 | pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita ... | [more] |
KAG7014158.1 | 5.0e-251 | 91.54 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
KAG6575615.1 | 5.0e-251 | 91.54 | Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita a... | [more] |
XP_023547614.1 | 9.5e-250 | 91.11 | pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita ... | [more] |
Match Name | E-value | Identity | Description | |
Q9M8M3 | 1.8e-155 | 61.36 | Pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Arabidop... | [more] |
Q9LFQ4 | 4.2e-59 | 35.17 | Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidop... | [more] |
Q9LIL5 | 4.0e-49 | 30.49 | Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis th... | [more] |
Q9SSR6 | 1.0e-44 | 30.38 | Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidop... | [more] |
Q9C9A2 | 1.1e-43 | 28.83 | Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidop... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1GNU3 | 1.4e-251 | 91.54 | pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Cucurbit... | [more] |
A0A6J1JMZ1 | 7.8e-250 | 91.11 | pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Cucurbit... | [more] |
A0A6J1D599 | 1.5e-248 | 90.24 | pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Momordic... | [more] |
A0A1S3CFA1 | 4.5e-245 | 88.72 | pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Cucumis ... | [more] |
A0A5A7UVK9 | 1.7e-244 | 88.50 | Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... | [more] |
Match Name | E-value | Identity | Description | |
AT1G80550.1 | 1.3e-156 | 61.36 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT5G15010.1 | 3.0e-60 | 35.17 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT3G15200.1 | 2.8e-50 | 30.49 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G52640.1 | 7.2e-46 | 30.38 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT1G71060.1 | 8.0e-45 | 28.83 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |