HG10023133 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10023133
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Unknown protein
Location	Chr05: 31523707 .. 31524799 (+)
RNA-Seq Expression	HG10023133
Synteny	HG10023133

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTGCTTCCATGGCGTTAGTGCCAAGCTTAAATCACAGCCTTAGATTTCCATCATCGAACGGATCAAAAGTTATGGCCGGCTCAAGCTCAATCAATCCTCCGATAAATTCCACCAGTTTCCGATCCGCCGGCGCGAAACGTTGCTTACGGTGCCGCACCATTTACTCGGATGTCGATAATTCTCCTTCCGCTTGCGCCTTCCATGGCCACATTACTGGTTCGTATCATAATCCTTAAGTTTAATTCTGATTTCTTCATTGGATAATTGGGGATGTTATGTGGTAAGTCGGTAAGAGTATGTTTGGCAGTCCCAAAAATTGCTATCTGATTCAGTTTTGTTAAATATTGTTTGTTAGTTATTCGTGACGCAAATTCTTTTTAAAAATTATTTACCAAAAGATGGCTGTTATTGCATGTCATTACAATGTTAACAGTACAAACCATTAGATTAGGTGAGATATATGTTTTGAATTTTCTTTCCATATTTACTCTACACATTTTTCTTACTAAACAAATCAATAAAAAATTTAACAATAAATTTAAGAAAAAATTACAAAAACTACCCTTGAAGTATGGTGGGTAGCTGCAAACTTACAATTACCCTCTGAGTTTTTCAATTGTAAAAATTGAATTCTCAAATTTATACAAGTGTTAAAATTGGATCCTTAAACTTAGTTGTAGAAATTGGATCTTTAAATGACCAAACTTATACAATTGTTATAATTTCTACAATCATGTAAGTTTGAGGGATTCGACTTTCCAATTTTCTCGTCTTTTGAAATTATGATACTTTTCTAGAAAAGTCGGTATGAGTTTAGTATTGAGATTAAAATAATATGTGAATTCGGTTTAATTTGCAGGGGAGAGAGGTTTGTATTCGTTGTCGCCACCGCACCAAGGAATCGACGGTGAGTGGAGTGATGGCTCTGGCGTAATCGTTTATAAGTGGAATGATAAGTCTAATCGTCCCAACACTGGGACCGGAAATTGGAAGAGACGGTGGAGTTGTTGCTTAGAGTACGATGAACATGCTCCTCCTTGTCGTCGGGGATGGCACGTTTCTTACGACGACAGTTTCACGTTGTTTTAA

mRNA sequence

ATGCTTGCTTCCATGGCGTTAGTGCCAAGCTTAAATCACAGCCTTAGATTTCCATCATCGAACGGATCAAAAGTTATGGCCGGCTCAAGCTCAATCAATCCTCCGATAAATTCCACCAGTTTCCGATCCGCCGGCGCGAAACGTTGCTTACGGTGCCGCACCATTTACTCGGATGTCGATAATTCTCCTTCCGCTTGCGCCTTCCATGGCCACATTACTGGGGAGAGAGGTTTGTATTCGTTGTCGCCACCGCACCAAGGAATCGACGGTGAGTGGAGTGATGGCTCTGGCGTAATCGTTTATAAGTGGAATGATAAGTCTAATCGTCCCAACACTGGGACCGGAAATTGGAAGAGACGGTGGAGTTGTTGCTTAGAGTACGATGAACATGCTCCTCCTTGTCGTCGGGGATGGCACGTTTCTTACGACGACAGTTTCACGTTGTTTTAA

Coding sequence (CDS)

ATGCTTGCTTCCATGGCGTTAGTGCCAAGCTTAAATCACAGCCTTAGATTTCCATCATCGAACGGATCAAAAGTTATGGCCGGCTCAAGCTCAATCAATCCTCCGATAAATTCCACCAGTTTCCGATCCGCCGGCGCGAAACGTTGCTTACGGTGCCGCACCATTTACTCGGATGTCGATAATTCTCCTTCCGCTTGCGCCTTCCATGGCCACATTACTGGGGAGAGAGGTTTGTATTCGTTGTCGCCACCGCACCAAGGAATCGACGGTGAGTGGAGTGATGGCTCTGGCGTAATCGTTTATAAGTGGAATGATAAGTCTAATCGTCCCAACACTGGGACCGGAAATTGGAAGAGACGGTGGAGTTGTTGCTTAGAGTACGATGAACATGCTCCTCCTTGTCGTCGGGGATGGCACGTTTCTTACGACGACAGTTTCACGTTGTTTTAA

Protein sequence

MLASMALVPSLNHSLRFPSSNGSKVMAGSSSINPPINSTSFRSAGAKRCLRCRTIYSDVDNSPSACAFHGHITGERGLYSLSPPHQGIDGEWSDGSGVIVYKWNDKSNRPNTGTGNWKRRWSCCLEYDEHAPPCRRGWHVSYDDSFTLF

Homology

[Close]

BLAST of HG10023133 vs. NCBI nr
Match: XP_008461278.1 (PREDICTED: uncharacterized protein LOC103499914 [Cucumis melo] >KAA0058637.1 uncharacterized protein E6C27_scaffold339G001060 [Cucumis melo var. makuwa] >TYK10444.1 uncharacterized protein E5676_scaffold459G00920 [Cucumis melo var. makuwa])

HSP 1 Score: 281.2 bits (718), Expect = 5.3e-72
Identity = 128/150 (85.33%), Postives = 139/150 (92.67%), Query Frame = 0


Query: 1   MLASMALVPSLNHSLRFPSSNGSKVMAGSSSINPPINSTSFR-SAGAKRCLRCRTIYSDV 60
           M+ASMAL PSL+HSL FP  NGSK++A S+SINPPINSTSF+ SA AKRCLRC T+YSDV
Sbjct: 1   MIASMALAPSLSHSLTFPPWNGSKIVACSNSINPPINSTSFQSSAVAKRCLRCHTVYSDV 60

Query: 61  DNSPSACAFHGHITGERGLYSLSPPHQGIDGEWSDGSGVIVYKWNDKSNRPNTGTGNWKR 120
           DNSPSACAFHGHITGERGL++LSPPHQGIDGEWSDGSGVIVYKWNDKSNRPN+GTGNWKR
Sbjct: 61  DNSPSACAFHGHITGERGLFALSPPHQGIDGEWSDGSGVIVYKWNDKSNRPNSGTGNWKR 120

Query: 121 RWSCCLEYDEHAPPCRRGWHVSYDDSFTLF 150
           RWSCC EYDE APPCRRGWHVSYDD FTL+
Sbjct: 121 RWSCCSEYDERAPPCRRGWHVSYDDGFTLY 150

[Close]

BLAST of HG10023133 vs. NCBI nr
Match: XP_004135925.1 (uncharacterized protein LOC101205320 [Cucumis sativus] >KGN45139.1 hypothetical protein Csa_016073 [Cucumis sativus])

HSP 1 Score: 279.6 bits (714), Expect = 1.5e-71
Identity = 127/150 (84.67%), Postives = 137/150 (91.33%), Query Frame = 0


Query: 1   MLASMALVPSLNHSLRFPSSNGSKVMAGSSSINPPINSTSFRSAG-AKRCLRCRTIYSDV 60
           M ASMAL PSLNHS RFP  NGSK++A S+SINPPINSTSF+S+  AKRCLRC T+YSDV
Sbjct: 1   MSASMALAPSLNHSPRFPPWNGSKIVACSNSINPPINSTSFQSSSVAKRCLRCHTVYSDV 60

Query: 61  DNSPSACAFHGHITGERGLYSLSPPHQGIDGEWSDGSGVIVYKWNDKSNRPNTGTGNWKR 120
           DNSPSAC FHGHITGERGL++LSPPHQGIDGEWSDGSGVIVYKWNDKSNRPN+GTGNWKR
Sbjct: 61  DNSPSACVFHGHITGERGLFALSPPHQGIDGEWSDGSGVIVYKWNDKSNRPNSGTGNWKR 120

Query: 121 RWSCCLEYDEHAPPCRRGWHVSYDDSFTLF 150
           RWSCC EYDE APPCRRGWHVSYDD FTL+
Sbjct: 121 RWSCCSEYDERAPPCRRGWHVSYDDGFTLY 150

[Close]

BLAST of HG10023133 vs. NCBI nr
Match: XP_022959906.1 (uncharacterized protein LOC111460822 [Cucurbita moschata] >KAG6593308.1 hypothetical protein SDJN03_12784, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 268.9 bits (686), Expect = 2.7e-68
Identity = 120/145 (82.76%), Postives = 128/145 (88.28%), Query Frame = 0


Query: 5   MALVPSLNHSLRFPSSNGSKVMAGSSSINPPINSTSFRSAGAKRCLRCRTIYSDVDNSPS 64
           MAL   LNHSL FPSSNGSK+ A +SS  PPI + SFRSA AKRCLRCRT+YSD+DNSPS
Sbjct: 1   MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAAAKRCLRCRTVYSDLDNSPS 60

Query: 65  ACAFHGHITGERGLYSLSPPHQGIDGEWSDGSGVIVYKWNDKSNRPNTGTGNWKRRWSCC 124
           ACAFHGH+TGE GL+SLSPPHQGIDGEWSDGSGVIVYKWN+K NRPNTG GNWKRRWSCC
Sbjct: 61  ACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKWNEKGNRPNTGAGNWKRRWSCC 120

Query: 125 LEYDEHAPPCRRGWHVSYDDSFTLF 150
            EYDE APPCRRGWHVSYDD FTLF
Sbjct: 121 SEYDEDAPPCRRGWHVSYDDGFTLF 145

[Close]

BLAST of HG10023133 vs. NCBI nr
Match: XP_023004680.1 (uncharacterized protein LOC111497902 [Cucurbita maxima])

HSP 1 Score: 265.0 bits (676), Expect = 3.9e-67
Identity = 119/145 (82.07%), Postives = 126/145 (86.90%), Query Frame = 0


Query: 5   MALVPSLNHSLRFPSSNGSKVMAGSSSINPPINSTSFRSAGAKRCLRCRTIYSDVDNSPS 64
           M L   LN  LRFPSSNGSK+ A +SS  PPI + SFRSA AKRCLRCRT+YSD+DNSPS
Sbjct: 1   MELSTCLNRRLRFPSSNGSKITACTSSNTPPIGNVSFRSAAAKRCLRCRTVYSDLDNSPS 60

Query: 65  ACAFHGHITGERGLYSLSPPHQGIDGEWSDGSGVIVYKWNDKSNRPNTGTGNWKRRWSCC 124
           ACAFHGHITGE GL+SLSPPHQGIDGEWSDGSGVIVYKWN+K NRPNTG GNWKRRWSCC
Sbjct: 61  ACAFHGHITGESGLFSLSPPHQGIDGEWSDGSGVIVYKWNEKGNRPNTGAGNWKRRWSCC 120

Query: 125 LEYDEHAPPCRRGWHVSYDDSFTLF 150
            EYDE APPCRRGWHVSYDD FTLF
Sbjct: 121 SEYDEDAPPCRRGWHVSYDDGFTLF 145

[Close]

BLAST of HG10023133 vs. NCBI nr
Match: KAG7025658.1 (hypothetical protein SDJN02_12155, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 238.4 bits (607), Expect = 3.9e-59
Identity = 107/132 (81.06%), Postives = 116/132 (87.88%), Query Frame = 0


Query: 5   MALVPSLNHSLRFPSSNGSKVMAGSSSINPPINSTSFRSAGAKRCLRCRTIYSDVDNSPS 64
           MAL   LNHSL FPSSNGSK+ A +SS  PPI + SFRSA AKRCLRCRT+YSD+DNSPS
Sbjct: 1   MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAAAKRCLRCRTVYSDLDNSPS 60

Query: 65  ACAFHGHITGERGLYSLSPPHQGIDGEWSDGSGVIVYKWNDKSNRPNTGTGNWKRRWSCC 124
           ACAFHGH+TGE GL+SLSPPHQGIDGEWSDGSGVIVYKWN+K NRPNTG GNWKRRWSCC
Sbjct: 61  ACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKWNEKGNRPNTGAGNWKRRWSCC 120

Query: 125 LEYDEHAPPCRR 137
            EYDE APPCR+
Sbjct: 121 SEYDEDAPPCRK 132

[Close]

BLAST of HG10023133 vs. ExPASy TrEMBL
Match: A0A5A7UVD3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00920 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.5e-72
Identity = 128/150 (85.33%), Postives = 139/150 (92.67%), Query Frame = 0


Query: 1   MLASMALVPSLNHSLRFPSSNGSKVMAGSSSINPPINSTSFR-SAGAKRCLRCRTIYSDV 60
           M+ASMAL PSL+HSL FP  NGSK++A S+SINPPINSTSF+ SA AKRCLRC T+YSDV
Sbjct: 1   MIASMALAPSLSHSLTFPPWNGSKIVACSNSINPPINSTSFQSSAVAKRCLRCHTVYSDV 60

Query: 61  DNSPSACAFHGHITGERGLYSLSPPHQGIDGEWSDGSGVIVYKWNDKSNRPNTGTGNWKR 120
           DNSPSACAFHGHITGERGL++LSPPHQGIDGEWSDGSGVIVYKWNDKSNRPN+GTGNWKR
Sbjct: 61  DNSPSACAFHGHITGERGLFALSPPHQGIDGEWSDGSGVIVYKWNDKSNRPNSGTGNWKR 120

Query: 121 RWSCCLEYDEHAPPCRRGWHVSYDDSFTLF 150
           RWSCC EYDE APPCRRGWHVSYDD FTL+
Sbjct: 121 RWSCCSEYDERAPPCRRGWHVSYDDGFTLY 150

[Close]

BLAST of HG10023133 vs. ExPASy TrEMBL
Match: A0A1S3CEC7 (uncharacterized protein LOC103499914 OS=Cucumis melo OX=3656 GN=LOC103499914 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.5e-72
Identity = 128/150 (85.33%), Postives = 139/150 (92.67%), Query Frame = 0


Query: 1   MLASMALVPSLNHSLRFPSSNGSKVMAGSSSINPPINSTSFR-SAGAKRCLRCRTIYSDV 60
           M+ASMAL PSL+HSL FP  NGSK++A S+SINPPINSTSF+ SA AKRCLRC T+YSDV
Sbjct: 1   MIASMALAPSLSHSLTFPPWNGSKIVACSNSINPPINSTSFQSSAVAKRCLRCHTVYSDV 60

Query: 61  DNSPSACAFHGHITGERGLYSLSPPHQGIDGEWSDGSGVIVYKWNDKSNRPNTGTGNWKR 120
           DNSPSACAFHGHITGERGL++LSPPHQGIDGEWSDGSGVIVYKWNDKSNRPN+GTGNWKR
Sbjct: 61  DNSPSACAFHGHITGERGLFALSPPHQGIDGEWSDGSGVIVYKWNDKSNRPNSGTGNWKR 120

Query: 121 RWSCCLEYDEHAPPCRRGWHVSYDDSFTLF 150
           RWSCC EYDE APPCRRGWHVSYDD FTL+
Sbjct: 121 RWSCCSEYDERAPPCRRGWHVSYDDGFTLY 150

[Close]

BLAST of HG10023133 vs. ExPASy TrEMBL
Match: A0A0A0K8C8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428270 PE=4 SV=1)

HSP 1 Score: 279.6 bits (714), Expect = 7.4e-72
Identity = 127/150 (84.67%), Postives = 137/150 (91.33%), Query Frame = 0


Query: 1   MLASMALVPSLNHSLRFPSSNGSKVMAGSSSINPPINSTSFRSAG-AKRCLRCRTIYSDV 60
           M ASMAL PSLNHS RFP  NGSK++A S+SINPPINSTSF+S+  AKRCLRC T+YSDV
Sbjct: 1   MSASMALAPSLNHSPRFPPWNGSKIVACSNSINPPINSTSFQSSSVAKRCLRCHTVYSDV 60

Query: 61  DNSPSACAFHGHITGERGLYSLSPPHQGIDGEWSDGSGVIVYKWNDKSNRPNTGTGNWKR 120
           DNSPSAC FHGHITGERGL++LSPPHQGIDGEWSDGSGVIVYKWNDKSNRPN+GTGNWKR
Sbjct: 61  DNSPSACVFHGHITGERGLFALSPPHQGIDGEWSDGSGVIVYKWNDKSNRPNSGTGNWKR 120

Query: 121 RWSCCLEYDEHAPPCRRGWHVSYDDSFTLF 150
           RWSCC EYDE APPCRRGWHVSYDD FTL+
Sbjct: 121 RWSCCSEYDERAPPCRRGWHVSYDDGFTLY 150

[Close]

BLAST of HG10023133 vs. ExPASy TrEMBL
Match: A0A6J1H664 (uncharacterized protein LOC111460822 OS=Cucurbita moschata OX=3662 GN=LOC111460822 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.3e-68
Identity = 120/145 (82.76%), Postives = 128/145 (88.28%), Query Frame = 0


Query: 5   MALVPSLNHSLRFPSSNGSKVMAGSSSINPPINSTSFRSAGAKRCLRCRTIYSDVDNSPS 64
           MAL   LNHSL FPSSNGSK+ A +SS  PPI + SFRSA AKRCLRCRT+YSD+DNSPS
Sbjct: 1   MALSTCLNHSLGFPSSNGSKITACTSSNTPPIGNVSFRSAAAKRCLRCRTVYSDLDNSPS 60

Query: 65  ACAFHGHITGERGLYSLSPPHQGIDGEWSDGSGVIVYKWNDKSNRPNTGTGNWKRRWSCC 124
           ACAFHGH+TGE GL+SLSPPHQGIDGEWSDGSGVIVYKWN+K NRPNTG GNWKRRWSCC
Sbjct: 61  ACAFHGHVTGESGLFSLSPPHQGIDGEWSDGSGVIVYKWNEKGNRPNTGAGNWKRRWSCC 120

Query: 125 LEYDEHAPPCRRGWHVSYDDSFTLF 150
            EYDE APPCRRGWHVSYDD FTLF
Sbjct: 121 SEYDEDAPPCRRGWHVSYDDGFTLF 145

[Close]

BLAST of HG10023133 vs. ExPASy TrEMBL
Match: A0A6J1KV96 (uncharacterized protein LOC111497902 OS=Cucurbita maxima OX=3661 GN=LOC111497902 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 1.9e-67
Identity = 119/145 (82.07%), Postives = 126/145 (86.90%), Query Frame = 0


Query: 5   MALVPSLNHSLRFPSSNGSKVMAGSSSINPPINSTSFRSAGAKRCLRCRTIYSDVDNSPS 64
           M L   LN  LRFPSSNGSK+ A +SS  PPI + SFRSA AKRCLRCRT+YSD+DNSPS
Sbjct: 1   MELSTCLNRRLRFPSSNGSKITACTSSNTPPIGNVSFRSAAAKRCLRCRTVYSDLDNSPS 60

Query: 65  ACAFHGHITGERGLYSLSPPHQGIDGEWSDGSGVIVYKWNDKSNRPNTGTGNWKRRWSCC 124
           ACAFHGHITGE GL+SLSPPHQGIDGEWSDGSGVIVYKWN+K NRPNTG GNWKRRWSCC
Sbjct: 61  ACAFHGHITGESGLFSLSPPHQGIDGEWSDGSGVIVYKWNEKGNRPNTGAGNWKRRWSCC 120

Query: 125 LEYDEHAPPCRRGWHVSYDDSFTLF 150
            EYDE APPCRRGWHVSYDD FTLF
Sbjct: 121 SEYDEDAPPCRRGWHVSYDDGFTLF 145

The following BLAST results are available for this feature:

BLAST of HG10023133 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461278.1	5.3e-72	85.33	PREDICTED: uncharacterized protein LOC103499914 [Cucumis melo] >KAA0058637.1 unc...	[more]
XP_004135925.1	1.5e-71	84.67	uncharacterized protein LOC101205320 [Cucumis sativus] >KGN45139.1 hypothetical ...	[more]
XP_022959906.1	2.7e-68	82.76	uncharacterized protein LOC111460822 [Cucurbita moschata] >KAG6593308.1 hypothet...	[more]
XP_023004680.1	3.9e-67	82.07	uncharacterized protein LOC111497902 [Cucurbita maxima]	[more]
KAG7025658.1	3.9e-59	81.06	hypothetical protein SDJN02_12155, partial [Cucurbita argyrosperma subsp. argyro...	[more]

BLAST of HG10023133 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10023133 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UVD3	2.5e-72	85.33	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CEC7	2.5e-72	85.33	uncharacterized protein LOC103499914 OS=Cucumis melo OX=3656 GN=LOC103499914 PE=...	[more]
A0A0A0K8C8	7.4e-72	84.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G428270 PE=4 SV=1	[more]
A0A6J1H664	1.3e-68	82.76	uncharacterized protein LOC111460822 OS=Cucurbita moschata OX=3662 GN=LOC1114608...	[more]
A0A6J1KV96	1.9e-67	82.07	uncharacterized protein LOC111497902 OS=Cucurbita maxima OX=3661 GN=LOC111497902...	[more]

BLAST of HG10023133 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35106:SF4	OS09G0485800 PROTEIN	coord: 20..149
None	No IPR available	PANTHER	PTHR35106	BNAA07G25190D PROTEIN	coord: 20..149

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10023133.1	HG10023133.1	mRNA