HG10023067 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10023067
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	tRNA:m(4)X modification enzyme TRM13
Location	Chr05: 30885943 .. 30888289 (+)
RNA-Seq Expression	HG10023067
Synteny	HG10023067

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCCGTTGTCAGTTTTGGCTTCCAAAGAAGAACAGATTCTGTGCAGTTGCTCCCATTAACGATTCCAAGTACCACCGCCAATTCTCATCCACTTCTATTTCTCTGGAATTTAATGGCTATTTCAATCGCTCAGTTCTCTTATAATTTCTCTTTGATTTTCGAAAATTTTGAAGGTTTTGTGGCAATCACAGCTCCAGAGCAGATGGAGAGATGGTTCCATGTCCCGTAGACCCGTCTCAGTAAGTTTAATAGCTTTCTTTCTCATCTGTGTACCTAGTGTTCGTTAACTCTGATATATAGCTTCCAATTTGGTAACAATTCTTAGTCTATTATGTTCTCTATATTCACTTCTCTAGCTCTGTGCTTCGAGAAAATCTTGAAGGGCATGTAAAGAGGTGTCCATTATTGAAACAAACTCGATCCTTGGCTATCCAACCGTTCTATCAAAAGGGCACCAATGCTGGGGAGGAGGATGCGATGTCGTCAGAAGGACTGGATTCGGGTTTGTCAGATTGCATTTCCTCTGAAATGAAGAGGAATATCGTTTATGGTATGTCTGGAGCCGAATTTCATCGCCTTCTCGGAAAGATTAGAGCTCTTCACAGTCTGATATGCAAGGATATTCAAGAGTCTTATAAGATAAAGGAAGCTTGCAATATGTGGATTAAAGGGGAAATAGATAGGTACTTGTGTTGTTTGCAATCAATTGCTTTCATGGGATTTAATGGGTTTTGTAAAATGTGCTCTGTTTTCTTTTGGGTAGGAAAATTCCATTTAAAGAGAAACATGTTCTGCAGCAGGCTTCAATTCTGGGGAACTTGGAGGAATTTGGAGTGCTGAGGAATTATGATGGAGGAGAACAATGTGAGGGTAACAGATCATATGGCAATGAGGCTAATGTTACCCCCGCCGTGGTTGAGTTCGGAGCAGGAAGAGGCTACTTAACTCAAATGCTTGCAGATTGTTATGGTATCAAAAGGGTGTTTCTGGTTGAGCGGAAATCATACAAATTGAAGGTTAAAATTCGCGATTTCGCCCTTATGTACGTCTAGATTTTTAGCAATTTGATCAGTTAAATTTTGGCAGTACTAAACTTTGTTTGGCTTTATATCCTTTAACTTTATGTGTTTTGTTATGCCAATGCAACCACTAGGCTGATCGATCACTGCGACAGAAAGAGAGCTTGATTTTAGAGCGTTTGAGAATCGACAGTAAGGTTTTCTCAAATTTTGTTTAATGTGTTTTCAAAATCACTCTTTTAACAAGCTATAGAAGTACATTATATAATCTTATACCTGCATTCTGAAAATGTTTATTGTGTCCTAATTGCAGCATGGTTAAAGTCTTTCTTGTGTTAATTCAATCTGATTCTTGATCTTGGTGACACAAGTATGTGGTTAAATTCTTTCTTACAGTTGAGGATCTAAACTTGAATGCTGTTGAATCTCTGAGGCATAATCCTTACTTAGCCATTGGTAAACATCTCTGTGGGCCTGCAACAGGTTGTTCAATCATAGTAATGAATATATTGTAAACTTTAATTGTTACCCCAAGTAAAGTTGTCTTAATTCCTATTACCTACTTTATTTCATAGATTTGGCTCTCAGATGTTGCCTTACCAAGCAATCCAATCATGCCGATACTGAACAGTGCGGAGATAAGCCAAAATTGAGTGGTTTGGCAATAGCGACATGTTGTCATCATCTTTGTCAATGGAAGCATTACACAAGTAAGTAATCCTTTTACATCTTGCCAATATATGCTTCAAATGAGGTAGATTTTTCCTTTTCTTTTGTTTAACTTTAGAGAAAAGCGGTACTCAATAGTTGTTTAAAGATGATCTTCCCTGCAGATAAGAGATATTTATTAGAAATGGGAATCACAAAAGAAGAATTTCTTGCTATCACATGGTTCACTAGTTGGGCAGTGGATGCTAATCACAGTGAAGATATTTCAGATATTACCGACTCGAAAACGTATCTTCAATCTAGGTAACCATCAACACGTGATGTGTATAAAAATTTTACTTTTACTATTCATATTGCAACCTCGTGATGGTTGATGGCCATTTTACGTAACCTTCGCCCAATTCTCATATCGTTGCAGTGAAAATGAAAGCGATGGAATGAATGGAAGCACGGTAGACGACATTGTAAAAAGTATGAATCCAGTGGAAAGGGCCGTCCTGGGATTTATGTGCAAGGAGATTATTGATATGGGAAGACTAATGTGGCTGAAGGAATGTGGGTTGGAAACACAGCTTGTTAAGTATGTCCCATCTAGCATTTCCCCTGAAAACCATTTACTAATTGCTAAATGCAGAAATATTTGTGCTACTTAG

mRNA sequence

ATGGCTTCCCGTTGTCAGTTTTGGCTTCCAAAGAAGAACAGATTCTGTGCAGTTGCTCCCATTAACGATTCCAAGTTTTGTGGCAATCACAGCTCCAGAGCAGATGGAGAGATGGTTCCATGTCCCGTAGACCCGTCTCACTCTGTGCTTCGAGAAAATCTTGAAGGGCATGTAAAGAGGTGTCCATTATTGAAACAAACTCGATCCTTGGCTATCCAACCGTTCTATCAAAAGGGCACCAATGCTGGGGAGGAGGATGCGATGTCGTCAGAAGGACTGGATTCGGGTTTGTCAGATTGCATTTCCTCTGAAATGAAGAGGAATATCGTTTATGGTATGTCTGGAGCCGAATTTCATCGCCTTCTCGGAAAGATTAGAGCTCTTCACAGTCTGATATGCAAGGATATTCAAGAGTCTTATAAGATAAAGGAAGCTTGCAATATGTGGATTAAAGGGGAAATAGATAGGAAAATTCCATTTAAAGAGAAACATGTTCTGCAGCAGGCTTCAATTCTGGGGAACTTGGAGGAATTTGGAGTGCTGAGGAATTATGATGGAGGAGAACAATGTGAGGGTAACAGATCATATGGCAATGAGGCTAATGTTACCCCCGCCGTGGTTGAGTTCGGAGCAGGAAGAGGCTACTTAACTCAAATGCTTGCAGATTGTTATGGTATCAAAAGGGTGTTTCTGGTTGAGCGGAAATCATACAAATTGAAGGCTGATCGATCACTGCGACAGAAAGAGAGCTTGATTTTAGAGCGTTTGAGAATCGACATTGAGGATCTAAACTTGAATGCTGTTGAATCTCTGAGGCATAATCCTTACTTAGCCATTGGTAAACATCTCTGTGGGCCTGCAACAGATTTGGCTCTCAGATGTTGCCTTACCAAGCAATCCAATCATGCCGATACTGAACAGTGCGGAGATAAGCCAAAATTGAGTGGTTTGGCAATAGCGACATGTTGTCATCATCTTTGTCAATGGAAGCATTACACAAATAAGAGATATTTATTAGAAATGGGAATCACAAAAGAAGAATTTCTTGCTATCACATGGTTCACTAGTTGGGCAGTGGATGCTAATCACAGTGAAGATATTTCAGATATTACCGACTCGAAAACGTATCTTCAATCTAGTGAAAATGAAAGCGATGGAATGAATGGAAGCACGGTAGACGACATTGTAAAAAGTATGAATCCAGTGGAAAGGGCCGTCCTGGGATTTATGTGCAAGGAGATTATTGATATGGGAAGACTAATGTGGCTGAAGGAATGTGGGTTGGAAACACAGCTTGTTAAGTATGTCCCATCTAGCATTTCCCCTGAAAACCATTTACTAATTGCTAAATGCAGAAATATTTGTGCTACTTAG

Coding sequence (CDS)

ATGGCTTCCCGTTGTCAGTTTTGGCTTCCAAAGAAGAACAGATTCTGTGCAGTTGCTCCCATTAACGATTCCAAGTTTTGTGGCAATCACAGCTCCAGAGCAGATGGAGAGATGGTTCCATGTCCCGTAGACCCGTCTCACTCTGTGCTTCGAGAAAATCTTGAAGGGCATGTAAAGAGGTGTCCATTATTGAAACAAACTCGATCCTTGGCTATCCAACCGTTCTATCAAAAGGGCACCAATGCTGGGGAGGAGGATGCGATGTCGTCAGAAGGACTGGATTCGGGTTTGTCAGATTGCATTTCCTCTGAAATGAAGAGGAATATCGTTTATGGTATGTCTGGAGCCGAATTTCATCGCCTTCTCGGAAAGATTAGAGCTCTTCACAGTCTGATATGCAAGGATATTCAAGAGTCTTATAAGATAAAGGAAGCTTGCAATATGTGGATTAAAGGGGAAATAGATAGGAAAATTCCATTTAAAGAGAAACATGTTCTGCAGCAGGCTTCAATTCTGGGGAACTTGGAGGAATTTGGAGTGCTGAGGAATTATGATGGAGGAGAACAATGTGAGGGTAACAGATCATATGGCAATGAGGCTAATGTTACCCCCGCCGTGGTTGAGTTCGGAGCAGGAAGAGGCTACTTAACTCAAATGCTTGCAGATTGTTATGGTATCAAAAGGGTGTTTCTGGTTGAGCGGAAATCATACAAATTGAAGGCTGATCGATCACTGCGACAGAAAGAGAGCTTGATTTTAGAGCGTTTGAGAATCGACATTGAGGATCTAAACTTGAATGCTGTTGAATCTCTGAGGCATAATCCTTACTTAGCCATTGGTAAACATCTCTGTGGGCCTGCAACAGATTTGGCTCTCAGATGTTGCCTTACCAAGCAATCCAATCATGCCGATACTGAACAGTGCGGAGATAAGCCAAAATTGAGTGGTTTGGCAATAGCGACATGTTGTCATCATCTTTGTCAATGGAAGCATTACACAAATAAGAGATATTTATTAGAAATGGGAATCACAAAAGAAGAATTTCTTGCTATCACATGGTTCACTAGTTGGGCAGTGGATGCTAATCACAGTGAAGATATTTCAGATATTACCGACTCGAAAACGTATCTTCAATCTAGTGAAAATGAAAGCGATGGAATGAATGGAAGCACGGTAGACGACATTGTAAAAAGTATGAATCCAGTGGAAAGGGCCGTCCTGGGATTTATGTGCAAGGAGATTATTGATATGGGAAGACTAATGTGGCTGAAGGAATGTGGGTTGGAAACACAGCTTGTTAAGTATGTCCCATCTAGCATTTCCCCTGAAAACCATTTACTAATTGCTAAATGCAGAAATATTTGTGCTACTTAG

Protein sequence

MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGEMVPCPVDPSHSVLRENLEGHVKRCPLLKQTRSLAIQPFYQKGTNAGEEDAMSSEGLDSGLSDCISSEMKRNIVYGMSGAEFHRLLGKIRALHSLICKDIQESYKIKEACNMWIKGEIDRKIPFKEKHVLQQASILGNLEEFGVLRNYDGGEQCEGNRSYGNEANVTPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLKADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQSNHADTEQCGDKPKLSGLAIATCCHHLCQWKHYTNKRYLLEMGITKEEFLAITWFTSWAVDANHSEDISDITDSKTYLQSSENESDGMNGSTVDDIVKSMNPVERAVLGFMCKEIIDMGRLMWLKECGLETQLVKYVPSSISPENHLLIAKCRNICAT

Homology

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BLAST of HG10023067 vs. NCBI nr
Match: XP_008461388.1 (PREDICTED: tRNA:m(4)X modification enzyme TRM13 homolog isoform X1 [Cucumis melo])

HSP 1 Score: 879.4 bits (2271), Expect = 1.3e-251
Identity = 424/457 (92.78%), Postives = 441/457 (96.50%), Query Frame = 0


Query: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGEMVPCPVDPSHSVLRENLEGHVKR 60
           MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADG+MVPCPVDPSHSVLRENL+GHVKR
Sbjct: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKR 60

Query: 61  CPLLKQTRSLAIQPFYQKGTNAGEEDAMSSEGLDSGLSDCISSEMKRNIVYGMSGAEFHR 120
           CPLLKQT+SLA QPFYQKG NAGEED+MS+ G DSGLSD ISSEMKRNIVYGMSG +FHR
Sbjct: 61  CPLLKQTQSLAGQPFYQKGINAGEEDSMSANGPDSGLSDSISSEMKRNIVYGMSGDQFHR 120

Query: 121 LLGKIRALHSLICKDIQESYKIKEACNMWIKGEIDRKIPFKEKHVLQQASILGNLEEFGV 180
           LLGKIRALH LICKDIQ+SY+IKEACNMWIKGEIDRKIPF+EKHVLQQASILGNL+EFGV
Sbjct: 121 LLGKIRALHDLICKDIQDSYQIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNLDEFGV 180

Query: 181 LRNYDGGEQCEGNRSYGNEANVTPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK 240
           LRNYDGG+Q EGNRSYGN+ANV PAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK
Sbjct: 181 LRNYDGGQQREGNRSYGNDANVVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK 240

Query: 241 ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQS 300
           ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQ 
Sbjct: 241 ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQP 300

Query: 301 NHADTEQCGDKPKLSGLAIATCCHHLCQWKHYTNKRYLLEMGITKEEFLAITWFTSWAVD 360
           N ADTEQC DK KL GLAIATCCHHLCQWKHYTNKRYLLE+GITKEEFLAITWFTSWAVD
Sbjct: 301 NQADTEQCRDKSKLRGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVD 360

Query: 361 ANHSEDISDITDSKTYLQSSENESDGMNGSTVDDIVKSMNPVERAVLGFMCKEIIDMGRL 420
           ANHSEDISD+TDSKT+LQSSENESDGM G TVD+IVKSMNPVERAVLGFMCKEIIDMGRL
Sbjct: 361 ANHSEDISDVTDSKTFLQSSENESDGMIGCTVDEIVKSMNPVERAVLGFMCKEIIDMGRL 420

Query: 421 MWLKECGLETQLVKYVPSSISPENHLLIAKCRNICAT 458
           MWLKECGLETQLVKYVPS+ISPENHLLIAKCRNICAT
Sbjct: 421 MWLKECGLETQLVKYVPSTISPENHLLIAKCRNICAT 457

[Close]

BLAST of HG10023067 vs. NCBI nr
Match: TYK10359.1 (tRNA:m(4)X modification enzyme TRM13-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 878.6 bits (2269), Expect = 2.3e-251
Identity = 424/457 (92.78%), Postives = 440/457 (96.28%), Query Frame = 0


Query: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGEMVPCPVDPSHSVLRENLEGHVKR 60
           MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADG+MVPCPVDPSHSVLRENL+GHVKR
Sbjct: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKR 60

Query: 61  CPLLKQTRSLAIQPFYQKGTNAGEEDAMSSEGLDSGLSDCISSEMKRNIVYGMSGAEFHR 120
           CPLLKQT+SLA QPFYQKG NAGEED MS+ G DSGLSD ISSEMKRNIVYGMSG +FHR
Sbjct: 61  CPLLKQTQSLAGQPFYQKGINAGEEDLMSANGPDSGLSDSISSEMKRNIVYGMSGDQFHR 120

Query: 121 LLGKIRALHSLICKDIQESYKIKEACNMWIKGEIDRKIPFKEKHVLQQASILGNLEEFGV 180
           LLGKIRALH LICKDIQ+SY+IKEACNMWIKGEIDRKIPF+EKHVLQQASILGNL+EFGV
Sbjct: 121 LLGKIRALHDLICKDIQDSYQIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNLDEFGV 180

Query: 181 LRNYDGGEQCEGNRSYGNEANVTPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK 240
           LRNYDGG+Q EGNRSYGN+ANV PAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK
Sbjct: 181 LRNYDGGQQREGNRSYGNDANVVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK 240

Query: 241 ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQS 300
           ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQ 
Sbjct: 241 ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQP 300

Query: 301 NHADTEQCGDKPKLSGLAIATCCHHLCQWKHYTNKRYLLEMGITKEEFLAITWFTSWAVD 360
           N ADTEQC DK KL GLAIATCCHHLCQWKHYTNKRYLLE+GITKEEFLAITWFTSWAVD
Sbjct: 301 NQADTEQCRDKSKLRGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVD 360

Query: 361 ANHSEDISDITDSKTYLQSSENESDGMNGSTVDDIVKSMNPVERAVLGFMCKEIIDMGRL 420
           ANHSEDISD+TDSKT+LQSSENESDGM G TVD+IVKSMNPVERAVLGFMCKEIIDMGRL
Sbjct: 361 ANHSEDISDVTDSKTFLQSSENESDGMIGCTVDEIVKSMNPVERAVLGFMCKEIIDMGRL 420

Query: 421 MWLKECGLETQLVKYVPSSISPENHLLIAKCRNICAT 458
           MWLKECGLETQLVKYVPS+ISPENHLLIAKCRNICAT
Sbjct: 421 MWLKECGLETQLVKYVPSTISPENHLLIAKCRNICAT 457

[Close]

BLAST of HG10023067 vs. NCBI nr
Match: KAA0058561.1 (tRNA:m(4)X modification enzyme TRM13-like protein isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 874.0 bits (2257), Expect = 5.6e-250
Identity = 424/458 (92.58%), Postives = 440/458 (96.07%), Query Frame = 0


Query: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGEMVPCPVDPSHSVLRENLEGHVKR 60
           MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADG+MVPCPVDPSHSVLRENL+GHVKR
Sbjct: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKR 60

Query: 61  CPLLKQTRSLAIQPFYQKGTNAGEEDAMSSEGLDSGLSDCISSEMKRNIVYGMSGAEFHR 120
           CPLLKQT+SLA QPFYQKG NAGEED MS+ G DSGLSD ISSEMKRNIVYGMSG +FHR
Sbjct: 61  CPLLKQTQSLAGQPFYQKGINAGEEDLMSANGPDSGLSDSISSEMKRNIVYGMSGDQFHR 120

Query: 121 LLGKIRALHSLICKDIQESYKIKEACNMWIKGEID-RKIPFKEKHVLQQASILGNLEEFG 180
           LLGKIRALH LICKDIQ+SY+IKEACNMWIKGEID RKIPF+EKHVLQQASILGNL+EFG
Sbjct: 121 LLGKIRALHDLICKDIQDSYQIKEACNMWIKGEIDSRKIPFQEKHVLQQASILGNLDEFG 180

Query: 181 VLRNYDGGEQCEGNRSYGNEANVTPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKL 240
           VLRNYDGG+Q EGNRSYGN+ANV PAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKL
Sbjct: 181 VLRNYDGGQQREGNRSYGNDANVVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKL 240

Query: 241 KADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQ 300
           KADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQ
Sbjct: 241 KADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQ 300

Query: 301 SNHADTEQCGDKPKLSGLAIATCCHHLCQWKHYTNKRYLLEMGITKEEFLAITWFTSWAV 360
            N ADTEQC DK KL GLAIATCCHHLCQWKHYTNKRYLLE+GITKEEFLAITWFTSWAV
Sbjct: 301 PNQADTEQCRDKSKLRGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAV 360

Query: 361 DANHSEDISDITDSKTYLQSSENESDGMNGSTVDDIVKSMNPVERAVLGFMCKEIIDMGR 420
           DANHSEDISD+TDSKT+LQSSENESDGM G TVD+IVKSMNPVERAVLGFMCKEIIDMGR
Sbjct: 361 DANHSEDISDVTDSKTFLQSSENESDGMIGCTVDEIVKSMNPVERAVLGFMCKEIIDMGR 420

Query: 421 LMWLKECGLETQLVKYVPSSISPENHLLIAKCRNICAT 458
           LMWLKECGLETQLVKYVPS+ISPENHLLIAKCRNICAT
Sbjct: 421 LMWLKECGLETQLVKYVPSTISPENHLLIAKCRNICAT 458

[Close]

BLAST of HG10023067 vs. NCBI nr
Match: XP_022991622.1 (tRNA:m(4)X modification enzyme TRM13 homolog [Cucurbita maxima])

HSP 1 Score: 872.8 bits (2254), Expect = 1.3e-249
Identity = 416/456 (91.23%), Postives = 437/456 (95.83%), Query Frame = 0


Query: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGEMVPCPVDPSHSVLRENLEGHVKR 60
           MASRCQFWLPKKNRFCA +PINDSKFCGNHSSRAD + VPCPVDPSHSVLRENLE HVKR
Sbjct: 1   MASRCQFWLPKKNRFCANSPINDSKFCGNHSSRADTQWVPCPVDPSHSVLRENLEWHVKR 60

Query: 61  CPLLKQTRSLAIQPFYQKGTNAGEEDAMSSEGLDSGLSDCISSEMKRNIVYGMSGAEFHR 120
           CPLLKQT+SLA+QPFYQKG NAGEED++SS+ L SGLSD ISSEMKRN+VYGMSGAEFHR
Sbjct: 61  CPLLKQTQSLAVQPFYQKGINAGEEDSISSDELASGLSDSISSEMKRNVVYGMSGAEFHR 120

Query: 121 LLGKIRALHSLICKDIQESYKIKEACNMWIKGEIDRKIPFKEKHVLQQASILGNLEEFGV 180
           LL KIRALH LICKDIQ+SY+IKEACNMWIKGEIDRKIPF+EKHVLQQASILGN+EEFGV
Sbjct: 121 LLAKIRALHGLICKDIQDSYRIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNMEEFGV 180

Query: 181 LRNYDGGEQCEGNRSYGNEANVTPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK 240
           LRNYDGGEQCEGNRS GNEANV PAV+EFGAGRGYLTQMLADCYGIKRV LVERKSYKLK
Sbjct: 181 LRNYDGGEQCEGNRSCGNEANVAPAVIEFGAGRGYLTQMLADCYGIKRVLLVERKSYKLK 240

Query: 241 ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQS 300
           ADRSLRQKESL+LERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQS
Sbjct: 241 ADRSLRQKESLVLERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQS 300

Query: 301 NHADTEQCGDKPKLSGLAIATCCHHLCQWKHYTNKRYLLEMGITKEEFLAITWFTSWAVD 360
           NH +TEQCGD+PKL GLAIATCCHHLCQWKHYTNKRYLLE+GITKEEFLAITWFTSWAVD
Sbjct: 301 NHVNTEQCGDRPKLRGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVD 360

Query: 361 ANHSEDISDITDSKTYLQSSENESDGMNGSTVDDIVKSMNPVERAVLGFMCKEIIDMGRL 420
           ANHSEDISD+ DSKT+LQSSENE DGMNGSTV+DI + MNPVERAVLGFMCKEIIDMGRL
Sbjct: 361 ANHSEDISDVADSKTFLQSSENEGDGMNGSTVEDIARHMNPVERAVLGFMCKEIIDMGRL 420

Query: 421 MWLKECGLETQLVKYVPSSISPENHLLIAKCRNICA 457
           MWLKECGLETQLVKYVPSSISPENHLLIAKCRNICA
Sbjct: 421 MWLKECGLETQLVKYVPSSISPENHLLIAKCRNICA 456

[Close]

BLAST of HG10023067 vs. NCBI nr
Match: KAG7014284.1 (tRNA:m(4)X modification enzyme TRM13-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 872.1 bits (2252), Expect = 2.1e-249
Identity = 417/456 (91.45%), Postives = 438/456 (96.05%), Query Frame = 0


Query: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGEMVPCPVDPSHSVLRENLEGHVKR 60
           MASRCQFWLPKKNRFCA +PINDSKFCGNHSSRAD + VPCPVDPSHSVLRENLE HVKR
Sbjct: 14  MASRCQFWLPKKNRFCANSPINDSKFCGNHSSRADTQWVPCPVDPSHSVLRENLEWHVKR 73

Query: 61  CPLLKQTRSLAIQPFYQKGTNAGEEDAMSSEGLDSGLSDCISSEMKRNIVYGMSGAEFHR 120
           CPLLKQT+SLA+QPFYQKG NAGEED++SS+ L SGLSD ISSEMKRNIVYGMSGAEFHR
Sbjct: 74  CPLLKQTQSLAVQPFYQKGINAGEEDSISSDELASGLSDGISSEMKRNIVYGMSGAEFHR 133

Query: 121 LLGKIRALHSLICKDIQESYKIKEACNMWIKGEIDRKIPFKEKHVLQQASILGNLEEFGV 180
           LL KIRALH LICKDIQ+SY+IKEACNMWIKGEIDRKIPF+EKHVLQQASILGN+EEFGV
Sbjct: 134 LLAKIRALHGLICKDIQDSYRIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNMEEFGV 193

Query: 181 LRNYDGGEQCEGNRSYGNEANVTPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK 240
           LRNYDGGEQCEGNRS GNEANV PAV+EFGAGRGYLTQMLADCYGIKRV LVERKSYKLK
Sbjct: 194 LRNYDGGEQCEGNRSCGNEANVAPAVIEFGAGRGYLTQMLADCYGIKRVLLVERKSYKLK 253

Query: 241 ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQS 300
           ADRSLRQKESL+LERLRIDIEDLNLNAVESLRH+PYLAIGKHLCGPATDLALRCCLTKQS
Sbjct: 254 ADRSLRQKESLVLERLRIDIEDLNLNAVESLRHDPYLAIGKHLCGPATDLALRCCLTKQS 313

Query: 301 NHADTEQCGDKPKLSGLAIATCCHHLCQWKHYTNKRYLLEMGITKEEFLAITWFTSWAVD 360
           NH +TEQCGD+PKL GLAIATCCHHLCQWKHYTNKRYLLE+GITKEEFLAITWFTSWAVD
Sbjct: 314 NHVNTEQCGDRPKLRGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVD 373

Query: 361 ANHSEDISDITDSKTYLQSSENESDGMNGSTVDDIVKSMNPVERAVLGFMCKEIIDMGRL 420
           ANHSEDISD++DSKT+LQSSENE DGMNGSTV+DI K MNPVERAVLGFMCKEIIDMGRL
Sbjct: 374 ANHSEDISDVSDSKTFLQSSENEGDGMNGSTVEDIAKHMNPVERAVLGFMCKEIIDMGRL 433

Query: 421 MWLKECGLETQLVKYVPSSISPENHLLIAKCRNICA 457
           MWLKECGLETQLVKYVPSSISPENHLLIAKCRNICA
Sbjct: 434 MWLKECGLETQLVKYVPSSISPENHLLIAKCRNICA 469

[Close]

BLAST of HG10023067 vs. ExPASy Swiss-Prot
Match: Q10B19 (tRNA:m(4)X modification enzyme TRM13 OS=Oryza sativa subsp. japonica OX=39947 GN=TRM13 PE=1 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.9e-62
Identity = 123/244 (50.41%), Postives = 161/244 (65.98%), Query Frame = 0


Query: 4   RCQFWLPKKNRFCAVAPINDSKFCGNH--SSRADG-----EMVPCPVDPSHSVLRENLEG 63
           RC FWLP K R CA  P+  S++CGNH   S +D       +VPCPVDPSH+VL ENLE 
Sbjct: 21  RCHFWLPNKRRHCANTPLPTSQYCGNHLPDSASDAGAPFRRLVPCPVDPSHTVLEENLEA 80

Query: 64  HVKRCPLLKQTRSLAIQPFYQKGTNAGEEDAMSSEGLDSGLSDCISSEMKRNIVYGMSGA 123
           HV +CPL KQ  +LA QPFY KG N+G       EG        ++S  KR +V+ ++  
Sbjct: 81  HVGKCPLKKQAAALAAQPFYSKGINSG-----GGEG-----GGGVTSAAKRALVHKLTKD 140

Query: 124 EFHRLLGKIRALHSLICKDIQESYKIKEACNMWIKGEIDRKIPFKEKHVLQQASILGNLE 183
           E   L+ KI+  H+     +++S+ + +AC+ W++ ++DRK+P++EKHV QQASI+GN+E
Sbjct: 141 ELRALIEKIKLAHASAAMAMRDSFLVTDACDNWMRNQVDRKVPYQEKHVTQQASIIGNME 200

Query: 184 EFGVLRNYDGGEQCEGNRSYGNEANVTPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKS 241
            FG+L+   GGE  E      N     PAVVEFGAGRGYLTQMLADCYGI+ VFLVER+S
Sbjct: 201 AFGLLQK--GGEVAE-----ENGVKNAPAVVEFGAGRGYLTQMLADCYGIRNVFLVERRS 247

[Close]

BLAST of HG10023067 vs. ExPASy Swiss-Prot
Match: Q8BYH3 (tRNA:m(4)X modification enzyme TRM13 homolog OS=Mus musculus OX=10090 GN=Trmt13 PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.4e-49
Identity = 155/497 (31.19%), Postives = 225/497 (45.27%), Query Frame = 0


Query: 4   RCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGE----MVPCPVDPSHSVLRENLEGHVK 63
           RC +++ KK RFC +      +FCG H+  A+ E     + CP+DP H+V  + L  H+K
Sbjct: 18  RCNYFVEKKKRFCRMVAAAGKRFCGEHAGSAEEENTRKRILCPLDPKHTVYEDQLAKHLK 77

Query: 64  RCPLLKQTRSLAIQPFYQKGTNAGEEDAMSSEGLDSGLSDCISSEMKRNIV--YGMSGAE 123
           +C     +R      F+ +  NAG +D                +E+   +V    +S  +
Sbjct: 78  KC----NSREKPKPDFFIQDINAGLKD---------------ETEIPEQLVPFSSLSEEQ 137

Query: 124 FHRLLGKIR----ALHSLICKDIQESYKIKEACNMWIKGEIDRKIPFKEKHVLQQASILG 183
              L+ K+R     L+S     I     + +A N    G+         KH+ QQASILG
Sbjct: 138 LENLIKKLRKASEGLNSTHEDHIMSHPALHDALNDPRNGDC------AVKHLKQQASILG 197

Query: 184 NLEEFGVLRNYDGGEQCEGNRSYGNEANVTPAVVEFGAGRGYLTQ----MLADCYGIKRV 243
           N+E+  +L    G  +C                VEFGAG+G L+      L D   +   
Sbjct: 198 NIEKLKLL----GPRRC---------------FVEFGAGKGKLSHWVDIALKDAENV-HF 257

Query: 244 FLVERKSYKLKADRSLRQKESLILERLRIDIEDLNLNAVESLRHN--PYLAIGKHLCGPA 303
            LVER + + K D   R+K+S + ERL+IDI+ L LN V  LR    P + IGKHLCG A
Sbjct: 258 ILVERVTTRFKVDGKHRKKDS-VFERLQIDIQHLCLNRVPVLREGRLPVVGIGKHLCGVA 317

Query: 304 TDLALRCC---------------LTKQSNHADTEQCG----------DKPK----LSGLA 363
           TD+ALRC                L K+  +  TE+            D P+    ++G+ 
Sbjct: 318 TDVALRCLVETYAASFEEKDEEPLAKRIKNDKTEKESNTLAKEGSEKDVPETWTPVAGIV 377

Query: 364 IATCCHHLCQWKHYTNKRYLLEMGITKEEFLAITWFTSWAV-DANHSEDISDITDSKTYL 423
           IA CCHH C W+HY  K Y   +G+   EF      +SWA      S + SD+T  +   
Sbjct: 378 IALCCHHRCDWRHYVGKEYFKALGLGAVEFYYFQRMSSWATCGMRTSLEGSDVTPERKDA 437

Query: 424 QSSENE-----SDGMNGSTVDDIVKSMNPVERAVLGFMCKEIIDMGRLMWLKECGLETQL 450
           Q  ENE      D +     D +   +   E+  +G +CK +ID GRL +L++ G    L
Sbjct: 438 QRDENEEHDDGGDRLTDGNTDSLPGILTVEEKKKIGHLCKLLIDQGRLQYLQQKGFSPAL 468

[Close]

BLAST of HG10023067 vs. ExPASy Swiss-Prot
Match: Q9NUP7 (tRNA:m(4)X modification enzyme TRM13 homolog OS=Homo sapiens OX=9606 GN=TRMT13 PE=1 SV=2)

HSP 1 Score: 189.1 bits (479), Expect = 1.1e-46
Identity = 148/501 (29.54%), Postives = 225/501 (44.91%), Query Frame = 0


Query: 4   RCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGE----MVPCPVDPSHSVLRENLEGHVK 63
           RC +++ KK RFC +      +FCG H+  A+ E     + CP+DP H+V  + L  H+K
Sbjct: 18  RCGYYVEKKKRFCRMVVAAGKRFCGEHAGAAEEEDARKRILCPLDPKHTVYEDQLAKHLK 77

Query: 64  RCPLLKQTRSLAIQPFYQKGTNAGEEDAMSSEGLDSGLSDCISSEMKRNIV--YGMSGAE 123
           +C     +R      FY +  NAG  D                +E+   +V    +S  +
Sbjct: 78  KC----NSREKPKPDFYIQDINAGLRD---------------ETEIPEQLVPISSLSEEQ 137

Query: 124 FHRLLGKIR----ALHSLICKDIQESYKIKEACNMWIKGEIDRKIPFKEKHVLQQASILG 183
             +L+ K+R     L+S +   I     + +A N    G+         KH+ QQASILG
Sbjct: 138 LEKLIKKLRKASEGLNSTLKDHIMSHPALHDALNDPKNGD------SATKHLKQQASILG 197

Query: 184 NLEEFGVLRNYDGGEQCEGNRSYGNEANVTPAVVEFGAGRGYLTQ----MLADCYGIKRV 243
           N+E   +L    G  +C                VEFGAG+G L+      L D   +   
Sbjct: 198 NIENLKLL----GPRRC---------------FVEFGAGKGKLSHWVDIALKDAEKV-HF 257

Query: 244 FLVERKSYKLKADRSLRQKESLILERLRIDIEDLNLNAVESLRHN--PYLAIGKHLCGPA 303
            LVE+ + + K D   R+K S + ERL+IDI+ L LN +  LR    P + IGKHLCG A
Sbjct: 258 ILVEKVTTRFKVDGKHRKKNS-VFERLQIDIQHLCLNKIPVLREEKLPVVGIGKHLCGMA 317

Query: 304 TDLALRCCLTKQSNHADTEQCGDKP-------------------------------KLSG 363
           TDLALRC +  ++  A  E+  ++P                                ++G
Sbjct: 318 TDLALRCLV--ETYAASFEERNEEPLAKRIKNDKTEKEIYTLAKEGNEKNVPEKWNPVAG 377

Query: 364 LAIATCCHHLCQWKHYTNKRYLLEMGITKEEFLAITWFTSWAVDANHSEDISDITDSKTY 423
           + IA CCHH C W+HY  K Y   +G+   EF      +SWA        + + ++S T 
Sbjct: 378 IVIALCCHHRCDWRHYVGKEYFRALGLGAVEFHYFQRMSSWATCGMRKTSL-ETSNSTTK 437

Query: 424 LQSSENE-----SDG---MNGSTVDDIVKSMNPVERAVLGFMCKEIIDMGRLMWLKECGL 450
            Q ++N+      DG   +     D +   ++  E+  +G +CK +ID GR+ +L++ G 
Sbjct: 438 RQDNQNDDSEEHDDGGYRITDDGADCLPGLLSVEEKKKIGHLCKLLIDQGRIQYLQQKGF 469

[Close]

BLAST of HG10023067 vs. ExPASy Swiss-Prot
Match: Q12383 (tRNA:m(4)X modification enzyme TRM13 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRM13 PE=1 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 5.1e-36
Identity = 129/503 (25.65%), Postives = 218/503 (43.34%), Query Frame = 0


Query: 4   RCQFWLPKKNRFCAVAPINDSKFCGNH------------------SSRADGEMVPCPVDP 63
           +C++++ KK R C +   + + +C  H                   +  + E VPCP+DP
Sbjct: 20  QCEYFMEKKKRRCGMTRSSQNLYCSEHLNLMKKAANSQVHNKNGSEAEKERERVPCPLDP 79

Query: 64  SHSVLRENLEGHVKRCPLLKQTRSLAIQPFYQKGTNAGEEDAMSSEGLDSGLSDCISSEM 123
           +H+V  + L+ H+K+C   K +     +P+Y+ G N              G +  +SS +
Sbjct: 80  NHTVWADQLKKHLKKCNKTKLSHLNDDKPYYEPGYN--------------GENGLLSSSV 139

Query: 124 KRNIVYGMSGAEFHRLLGKIRALHSLICKDIQESYKIKEACNMWIKGEIDRKIPFKEKHV 183
           K +I           L+  I  L+ +   +  +   +++  N  +  +   ++P   KH 
Sbjct: 140 KIDIT-------AEHLVQSIELLYKVFEGESMDELPLRQLNNKLMSLKRFPQLPSNTKHA 199

Query: 184 LQQASILGNLEEFGVLRNYDGGEQCEGNRSYGNEANVTPAVVEFGAGRG----------- 243
           +QQ+S++ NL + G                   E   +   +EFG GR            
Sbjct: 200 VQQSSLIENLVDAGAF-----------------ERPESLNFIEFGCGRAEFSRYVSLYLL 259

Query: 244 -YLTQMLADCYG--IKRVFLVERKSYKLKADRSLRQKESLI-------------LERLRI 303
             LT + A+  G       L++R + ++K D+ ++   S I             ++R++I
Sbjct: 260 TQLTSLPAEHSGSNSNEFVLIDRATNRMKFDKKIKDDFSEIKSNSPSKPISCPSIKRIKI 319

Query: 304 DIEDLNLNAVESLRHNP-----YLAIGKHLCGPATDLALRCCLTKQSNHADTEQCGDKPK 363
           DI DL ++ +  L+  P     Y+ I KHLCG ATDL LRC       H D +  G  PK
Sbjct: 320 DIRDLKMDPI--LKSTPGDDIQYVCISKHLCGVATDLTLRCIGNSSILHGD-DNNGCNPK 379

Query: 364 LSGLAIATCCHHLCQWKHYTNKRYLLEMG---------ITKEEFL-AITWFTSWAVDANH 423
           L  + IA CC H+C +  Y N+ Y+  +          +T E F   +T   SW      
Sbjct: 380 LKAICIAMCCRHVCDYGDYVNRSYVTSLVEKYRAHGSILTYETFFRVLTKLCSWGTCGR- 439

Query: 424 SEDISDITDSKTYLQSSENESDGMNGSTVDDIVKSMNPVERAVLGFMCKEIIDMGRLMWL 445
            +  + ITD    ++S E    G    T+   +K     ER  +G M + +ID GRL+++
Sbjct: 440 -KPGTAITDIVNVVESFE----GAEPYTI--TIK-----ERENIGLMARRVIDEGRLVYV 468

[Close]

BLAST of HG10023067 vs. ExPASy Swiss-Prot
Match: Q6CP50 (tRNA:m(4)X modification enzyme TRM13 OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) OX=284590 GN=TRM13 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 3.1e-33
Identity = 128/468 (27.35%), Postives = 209/468 (44.66%), Query Frame = 0


Query: 4   RCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGEMVPCPVDPSHSVLRENLEGHVKRCPL 63
           +C+F+L KK R C +     S+FC  HS+  D + VPCP+DPSH+V    +  H+++C  
Sbjct: 19  QCEFFLVKKKRQCGMTRRAGSQFCSEHST--DSDRVPCPLDPSHTVCLSKMRVHMRKCNK 78

Query: 64  LKQTRSLAIQ----PFYQKGTNAGEEDAMSSEGLDSGLSDCISSEMKRNIVYGMSGAEFH 123
            +   S   +    P++++G N+       S+  D  L   +S  + + I     G E  
Sbjct: 79  FRHDVSYQAKQREIPWFKEGLNSISNGKSDSKPADETLVKSVS--LIQKIFQNEFGDEPP 138

Query: 124 RLLGKIRALHSLICKDIQESYKIKEACNMWIKGEIDRKIPFKEKHVLQQASILGNLEEFG 183
             L             I++  ++ E    +       K     KH  QQ+S++ +L+E  
Sbjct: 139 LPL-------------IEKQNELLERTERY-------KTLVNRKHARQQSSLIQHLKE-- 198

Query: 184 VLRNYDGGEQCEGNRSYGNEANVTPAVVEFGAGRGYLTQMLADCYGIKR----------- 243
             + +   E C  N+        T   +E G GR   ++ +     + +           
Sbjct: 199 -SKLWPSLESCAVNK--------TLEYIELGCGRAEFSRYVNIATNLDQKEHSHEKPEYK 258

Query: 244 -----VFLVERKSYKLKADRSLRQK--ESLILERLRIDIEDLNLNAVESLRHNPYLAIGK 303
                  L++R S +L+ D          + + R +IDI+DL L+AV     + Y+AI K
Sbjct: 259 AVAPSFTLIDRASQRLRFDNKFSSDIGTEVQIRREKIDIKDLRLDAVLH-DASQYVAISK 318

Query: 304 HLCGPATDLALRCCLTKQSNHADTEQCGDKPKLSGLAIATCCHHLCQWKHYTNKRYLLEM 363
           HLCG ATDL+LRC L       ++++C  K  L G+ IA CC H+CQ   Y N+ Y+   
Sbjct: 319 HLCGVATDLSLRCLL-------NSDKC--KANLRGILIAMCCRHVCQSSEYVNQEYI--K 378

Query: 364 GITKEEFLAITWFTSWAVDANHSEDISDITDSKTYLQSSENESDGMNGSTVDDIVKSMNP 423
           G+ K +       T  ++   +SE    +    +Y           N  + D I K +  
Sbjct: 379 GLLKRQ-------TDGSM--AYSEFFQCLKKFCSYCTCGLRPDMDPNSGSEDHITK-LTH 429

Query: 424 VERAVLGFMCKEIIDMGRLMWLKECGLETQLVKYVPSSISPENHLLIA 450
            ER  +G M + IID GR  +L+  G ET L KY  S+++ E+  L+A
Sbjct: 439 NERQRIGHMARRIIDEGRAQFLQSKGFETVLFKYTDSAVTLEDTALLA 429

[Close]

BLAST of HG10023067 vs. ExPASy TrEMBL
Match: A0A1S3CF14 (tRNA:m(4)X modification enzyme TRM13 OS=Cucumis melo OX=3656 GN=LOC103499984 PE=3 SV=1)

HSP 1 Score: 879.4 bits (2271), Expect = 6.5e-252
Identity = 424/457 (92.78%), Postives = 441/457 (96.50%), Query Frame = 0


Query: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGEMVPCPVDPSHSVLRENLEGHVKR 60
           MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADG+MVPCPVDPSHSVLRENL+GHVKR
Sbjct: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKR 60

Query: 61  CPLLKQTRSLAIQPFYQKGTNAGEEDAMSSEGLDSGLSDCISSEMKRNIVYGMSGAEFHR 120
           CPLLKQT+SLA QPFYQKG NAGEED+MS+ G DSGLSD ISSEMKRNIVYGMSG +FHR
Sbjct: 61  CPLLKQTQSLAGQPFYQKGINAGEEDSMSANGPDSGLSDSISSEMKRNIVYGMSGDQFHR 120

Query: 121 LLGKIRALHSLICKDIQESYKIKEACNMWIKGEIDRKIPFKEKHVLQQASILGNLEEFGV 180
           LLGKIRALH LICKDIQ+SY+IKEACNMWIKGEIDRKIPF+EKHVLQQASILGNL+EFGV
Sbjct: 121 LLGKIRALHDLICKDIQDSYQIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNLDEFGV 180

Query: 181 LRNYDGGEQCEGNRSYGNEANVTPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK 240
           LRNYDGG+Q EGNRSYGN+ANV PAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK
Sbjct: 181 LRNYDGGQQREGNRSYGNDANVVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK 240

Query: 241 ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQS 300
           ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQ 
Sbjct: 241 ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQP 300

Query: 301 NHADTEQCGDKPKLSGLAIATCCHHLCQWKHYTNKRYLLEMGITKEEFLAITWFTSWAVD 360
           N ADTEQC DK KL GLAIATCCHHLCQWKHYTNKRYLLE+GITKEEFLAITWFTSWAVD
Sbjct: 301 NQADTEQCRDKSKLRGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVD 360

Query: 361 ANHSEDISDITDSKTYLQSSENESDGMNGSTVDDIVKSMNPVERAVLGFMCKEIIDMGRL 420
           ANHSEDISD+TDSKT+LQSSENESDGM G TVD+IVKSMNPVERAVLGFMCKEIIDMGRL
Sbjct: 361 ANHSEDISDVTDSKTFLQSSENESDGMIGCTVDEIVKSMNPVERAVLGFMCKEIIDMGRL 420

Query: 421 MWLKECGLETQLVKYVPSSISPENHLLIAKCRNICAT 458
           MWLKECGLETQLVKYVPS+ISPENHLLIAKCRNICAT
Sbjct: 421 MWLKECGLETQLVKYVPSTISPENHLLIAKCRNICAT 457

[Close]

BLAST of HG10023067 vs. ExPASy TrEMBL
Match: A0A5D3CJH7 (tRNA:m(4)X modification enzyme TRM13 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00010 PE=3 SV=1)

HSP 1 Score: 878.6 bits (2269), Expect = 1.1e-251
Identity = 424/457 (92.78%), Postives = 440/457 (96.28%), Query Frame = 0


Query: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGEMVPCPVDPSHSVLRENLEGHVKR 60
           MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADG+MVPCPVDPSHSVLRENL+GHVKR
Sbjct: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKR 60

Query: 61  CPLLKQTRSLAIQPFYQKGTNAGEEDAMSSEGLDSGLSDCISSEMKRNIVYGMSGAEFHR 120
           CPLLKQT+SLA QPFYQKG NAGEED MS+ G DSGLSD ISSEMKRNIVYGMSG +FHR
Sbjct: 61  CPLLKQTQSLAGQPFYQKGINAGEEDLMSANGPDSGLSDSISSEMKRNIVYGMSGDQFHR 120

Query: 121 LLGKIRALHSLICKDIQESYKIKEACNMWIKGEIDRKIPFKEKHVLQQASILGNLEEFGV 180
           LLGKIRALH LICKDIQ+SY+IKEACNMWIKGEIDRKIPF+EKHVLQQASILGNL+EFGV
Sbjct: 121 LLGKIRALHDLICKDIQDSYQIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNLDEFGV 180

Query: 181 LRNYDGGEQCEGNRSYGNEANVTPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK 240
           LRNYDGG+Q EGNRSYGN+ANV PAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK
Sbjct: 181 LRNYDGGQQREGNRSYGNDANVVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK 240

Query: 241 ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQS 300
           ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQ 
Sbjct: 241 ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQP 300

Query: 301 NHADTEQCGDKPKLSGLAIATCCHHLCQWKHYTNKRYLLEMGITKEEFLAITWFTSWAVD 360
           N ADTEQC DK KL GLAIATCCHHLCQWKHYTNKRYLLE+GITKEEFLAITWFTSWAVD
Sbjct: 301 NQADTEQCRDKSKLRGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVD 360

Query: 361 ANHSEDISDITDSKTYLQSSENESDGMNGSTVDDIVKSMNPVERAVLGFMCKEIIDMGRL 420
           ANHSEDISD+TDSKT+LQSSENESDGM G TVD+IVKSMNPVERAVLGFMCKEIIDMGRL
Sbjct: 361 ANHSEDISDVTDSKTFLQSSENESDGMIGCTVDEIVKSMNPVERAVLGFMCKEIIDMGRL 420

Query: 421 MWLKECGLETQLVKYVPSSISPENHLLIAKCRNICAT 458
           MWLKECGLETQLVKYVPS+ISPENHLLIAKCRNICAT
Sbjct: 421 MWLKECGLETQLVKYVPSTISPENHLLIAKCRNICAT 457

[Close]

BLAST of HG10023067 vs. ExPASy TrEMBL
Match: A0A5A7UYK4 (tRNA:m(4)X modification enzyme TRM13 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G00280 PE=3 SV=1)

HSP 1 Score: 874.0 bits (2257), Expect = 2.7e-250
Identity = 424/458 (92.58%), Postives = 440/458 (96.07%), Query Frame = 0


Query: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGEMVPCPVDPSHSVLRENLEGHVKR 60
           MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADG+MVPCPVDPSHSVLRENL+GHVKR
Sbjct: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGDMVPCPVDPSHSVLRENLQGHVKR 60

Query: 61  CPLLKQTRSLAIQPFYQKGTNAGEEDAMSSEGLDSGLSDCISSEMKRNIVYGMSGAEFHR 120
           CPLLKQT+SLA QPFYQKG NAGEED MS+ G DSGLSD ISSEMKRNIVYGMSG +FHR
Sbjct: 61  CPLLKQTQSLAGQPFYQKGINAGEEDLMSANGPDSGLSDSISSEMKRNIVYGMSGDQFHR 120

Query: 121 LLGKIRALHSLICKDIQESYKIKEACNMWIKGEID-RKIPFKEKHVLQQASILGNLEEFG 180
           LLGKIRALH LICKDIQ+SY+IKEACNMWIKGEID RKIPF+EKHVLQQASILGNL+EFG
Sbjct: 121 LLGKIRALHDLICKDIQDSYQIKEACNMWIKGEIDSRKIPFQEKHVLQQASILGNLDEFG 180

Query: 181 VLRNYDGGEQCEGNRSYGNEANVTPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKL 240
           VLRNYDGG+Q EGNRSYGN+ANV PAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKL
Sbjct: 181 VLRNYDGGQQREGNRSYGNDANVVPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKL 240

Query: 241 KADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQ 300
           KADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQ
Sbjct: 241 KADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQ 300

Query: 301 SNHADTEQCGDKPKLSGLAIATCCHHLCQWKHYTNKRYLLEMGITKEEFLAITWFTSWAV 360
            N ADTEQC DK KL GLAIATCCHHLCQWKHYTNKRYLLE+GITKEEFLAITWFTSWAV
Sbjct: 301 PNQADTEQCRDKSKLRGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAV 360

Query: 361 DANHSEDISDITDSKTYLQSSENESDGMNGSTVDDIVKSMNPVERAVLGFMCKEIIDMGR 420
           DANHSEDISD+TDSKT+LQSSENESDGM G TVD+IVKSMNPVERAVLGFMCKEIIDMGR
Sbjct: 361 DANHSEDISDVTDSKTFLQSSENESDGMIGCTVDEIVKSMNPVERAVLGFMCKEIIDMGR 420

Query: 421 LMWLKECGLETQLVKYVPSSISPENHLLIAKCRNICAT 458
           LMWLKECGLETQLVKYVPS+ISPENHLLIAKCRNICAT
Sbjct: 421 LMWLKECGLETQLVKYVPSTISPENHLLIAKCRNICAT 458

[Close]

BLAST of HG10023067 vs. ExPASy TrEMBL
Match: A0A6J1JMC6 (tRNA:m(4)X modification enzyme TRM13 OS=Cucurbita maxima OX=3661 GN=LOC111488184 PE=3 SV=1)

HSP 1 Score: 872.8 bits (2254), Expect = 6.1e-250
Identity = 416/456 (91.23%), Postives = 437/456 (95.83%), Query Frame = 0


Query: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGEMVPCPVDPSHSVLRENLEGHVKR 60
           MASRCQFWLPKKNRFCA +PINDSKFCGNHSSRAD + VPCPVDPSHSVLRENLE HVKR
Sbjct: 1   MASRCQFWLPKKNRFCANSPINDSKFCGNHSSRADTQWVPCPVDPSHSVLRENLEWHVKR 60

Query: 61  CPLLKQTRSLAIQPFYQKGTNAGEEDAMSSEGLDSGLSDCISSEMKRNIVYGMSGAEFHR 120
           CPLLKQT+SLA+QPFYQKG NAGEED++SS+ L SGLSD ISSEMKRN+VYGMSGAEFHR
Sbjct: 61  CPLLKQTQSLAVQPFYQKGINAGEEDSISSDELASGLSDSISSEMKRNVVYGMSGAEFHR 120

Query: 121 LLGKIRALHSLICKDIQESYKIKEACNMWIKGEIDRKIPFKEKHVLQQASILGNLEEFGV 180
           LL KIRALH LICKDIQ+SY+IKEACNMWIKGEIDRKIPF+EKHVLQQASILGN+EEFGV
Sbjct: 121 LLAKIRALHGLICKDIQDSYRIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNMEEFGV 180

Query: 181 LRNYDGGEQCEGNRSYGNEANVTPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK 240
           LRNYDGGEQCEGNRS GNEANV PAV+EFGAGRGYLTQMLADCYGIKRV LVERKSYKLK
Sbjct: 181 LRNYDGGEQCEGNRSCGNEANVAPAVIEFGAGRGYLTQMLADCYGIKRVLLVERKSYKLK 240

Query: 241 ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQS 300
           ADRSLRQKESL+LERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQS
Sbjct: 241 ADRSLRQKESLVLERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQS 300

Query: 301 NHADTEQCGDKPKLSGLAIATCCHHLCQWKHYTNKRYLLEMGITKEEFLAITWFTSWAVD 360
           NH +TEQCGD+PKL GLAIATCCHHLCQWKHYTNKRYLLE+GITKEEFLAITWFTSWAVD
Sbjct: 301 NHVNTEQCGDRPKLRGLAIATCCHHLCQWKHYTNKRYLLELGITKEEFLAITWFTSWAVD 360

Query: 361 ANHSEDISDITDSKTYLQSSENESDGMNGSTVDDIVKSMNPVERAVLGFMCKEIIDMGRL 420
           ANHSEDISD+ DSKT+LQSSENE DGMNGSTV+DI + MNPVERAVLGFMCKEIIDMGRL
Sbjct: 361 ANHSEDISDVADSKTFLQSSENEGDGMNGSTVEDIARHMNPVERAVLGFMCKEIIDMGRL 420

Query: 421 MWLKECGLETQLVKYVPSSISPENHLLIAKCRNICA 457
           MWLKECGLETQLVKYVPSSISPENHLLIAKCRNICA
Sbjct: 421 MWLKECGLETQLVKYVPSSISPENHLLIAKCRNICA 456

[Close]

BLAST of HG10023067 vs. ExPASy TrEMBL
Match: A0A6J1GSU8 (tRNA:m(4)X modification enzyme TRM13 OS=Cucurbita moschata OX=3662 GN=LOC111456639 PE=3 SV=1)

HSP 1 Score: 868.6 bits (2243), Expect = 1.1e-248
Identity = 414/456 (90.79%), Postives = 437/456 (95.83%), Query Frame = 0


Query: 1   MASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGEMVPCPVDPSHSVLRENLEGHVKR 60
           MASRCQFWLPKKNRFCA +PINDSKFCGNHSSRAD + VPCPVDPSHSVLRENLE HVKR
Sbjct: 1   MASRCQFWLPKKNRFCANSPINDSKFCGNHSSRADTQWVPCPVDPSHSVLRENLEWHVKR 60

Query: 61  CPLLKQTRSLAIQPFYQKGTNAGEEDAMSSEGLDSGLSDCISSEMKRNIVYGMSGAEFHR 120
           CPLLKQT+SLA+QPFYQKG NAGEED++SS+ L SGLSD ISSEMKRNIVYGMSGAEFHR
Sbjct: 61  CPLLKQTQSLAVQPFYQKGINAGEEDSISSDELASGLSDSISSEMKRNIVYGMSGAEFHR 120

Query: 121 LLGKIRALHSLICKDIQESYKIKEACNMWIKGEIDRKIPFKEKHVLQQASILGNLEEFGV 180
           LL KIRALH LICKDIQ+SY+IKEACNMWIKGEIDRKIPF+EKHVLQQASILGN+EEFGV
Sbjct: 121 LLAKIRALHGLICKDIQDSYRIKEACNMWIKGEIDRKIPFQEKHVLQQASILGNMEEFGV 180

Query: 181 LRNYDGGEQCEGNRSYGNEANVTPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLK 240
           LRNYDGGEQCEGNRS GNEANV PAV+EFGAGRGYLTQMLADCYGIKRV LVERKSYKLK
Sbjct: 181 LRNYDGGEQCEGNRSCGNEANVAPAVIEFGAGRGYLTQMLADCYGIKRVLLVERKSYKLK 240

Query: 241 ADRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQS 300
           ADRSLRQKESL+LERLRIDIEDLNLNAVESLRH+PYLAIGKHLCGPATDLALRCCLTKQS
Sbjct: 241 ADRSLRQKESLVLERLRIDIEDLNLNAVESLRHDPYLAIGKHLCGPATDLALRCCLTKQS 300

Query: 301 NHADTEQCGDKPKLSGLAIATCCHHLCQWKHYTNKRYLLEMGITKEEFLAITWFTSWAVD 360
           NH +TEQCGD+PKL GLAIATCCHHLCQWKHYTNK+YLLE+GI KEEFLAITWFTSWAVD
Sbjct: 301 NHVNTEQCGDRPKLRGLAIATCCHHLCQWKHYTNKKYLLELGIAKEEFLAITWFTSWAVD 360

Query: 361 ANHSEDISDITDSKTYLQSSENESDGMNGSTVDDIVKSMNPVERAVLGFMCKEIIDMGRL 420
           ANHSEDISD++DSKT+LQSSENE DGMNGSTV+DI + MNPVERAVLGFMCKEIIDMGRL
Sbjct: 361 ANHSEDISDVSDSKTFLQSSENEGDGMNGSTVEDIARHMNPVERAVLGFMCKEIIDMGRL 420

Query: 421 MWLKECGLETQLVKYVPSSISPENHLLIAKCRNICA 457
           MWLKECGLETQLVKYVPSSISPENHLLIAKCRNICA
Sbjct: 421 MWLKECGLETQLVKYVPSSISPENHLLIAKCRNICA 456

[Close]

BLAST of HG10023067 vs. TAIR 10
Match: AT4G01880.1 (methyltransferases )

HSP 1 Score: 555.1 bits (1429), Expect = 5.4e-158
Identity = 273/452 (60.40%), Postives = 338/452 (74.78%), Query Frame = 0


Query: 2   ASRCQFWLPKKNRFCAVAPINDSKFCGNHSSRADGEMVPCPVDPSHSVLRENLEGHVKRC 61
           ++RC FWLPKK R CA   I  S FCGNHS R +G+ +PCP+DPSHSVL+ENLE HVKRC
Sbjct: 6   SNRCSFWLPKKKRSCANTRIESSMFCGNHSQRLEGQWIPCPIDPSHSVLQENLEWHVKRC 65

Query: 62  PLLKQTRSLAIQPFYQKGTNAGEEDAMSSEGLDSGLSDCISSEMKRNIVYGMSGAEFHRL 121
           PLLKQT  L+ Q FYQKG NAG ++    E    G    ++SEMKRN++Y MS ++FH+L
Sbjct: 66  PLLKQTVELSGQRFYQKGINAGNDE----EEEKMGSCSLVTSEMKRNLLYSMSVSKFHQL 125

Query: 122 LGKIRALHSLICKDIQESYKIKEACNMWIKGEIDRKIPFKEKHVLQQASILGNLEEFGVL 181
           + KI  +H  ICKDI++SY   EACN+W   EIDRK+PF+EKHVLQQ SILGNLEE GVL
Sbjct: 126 IKKIEDVHGGICKDIEDSYLSPEACNIWFNKEIDRKLPFQEKHVLQQGSILGNLEEIGVL 185

Query: 182 RNYDGGEQCEGNRSYGNEANVTPAVVEFGAGRGYLTQMLADCYGIKRVFLVERKSYKLKA 241
           +  +   +C  +     + N  PAVVEFGAGRGYLTQMLADCYGIK+V+LVERKSYKLKA
Sbjct: 186 KRCNINVECCESDLEEKDDNTAPAVVEFGAGRGYLTQMLADCYGIKKVYLVERKSYKLKA 245

Query: 242 DRSLRQKESLILERLRIDIEDLNLNAVESLRHNPYLAIGKHLCGPATDLALRCCLTKQSN 301
           DRSLRQKESL+LER+RIDIEDLNLNAVESL   PY+A+GKHLCGPATDL+LRCCL++Q  
Sbjct: 246 DRSLRQKESLVLERMRIDIEDLNLNAVESLHGVPYVAVGKHLCGPATDLSLRCCLSRQD- 305

Query: 302 HADTEQCGDKPKLSGLAIATCCHHLCQWKHYTNKRYLLEMGITKEEFLAITWFTSWAVDA 361
                  G+ P L GLAIATCCHHL QWK Y NK Y+L +GI+K+EF  +T FTSWAVD 
Sbjct: 306 -------GESPVLRGLAIATCCHHLSQWKSYINKEYILSLGISKDEFHIMTSFTSWAVDD 365

Query: 362 NHSEDISDITDSKTYLQSSENESDG----MNGSTVDDIVKSMNPVERAVLGFMCKEIIDM 421
           +H   +  + D      +++ E +G     +  +V+++VK M P+ERAVLGF CK+IID 
Sbjct: 366 DHGSKLPGVDDIDLLDSNAKEEEEGEVRDASLISVEEVVKKMKPMERAVLGFKCKQIIDA 425

Query: 422 GRLMWLKECGLETQLVKYVPSSISPENHLLIA 450
           GR+ W+K+ GL ++LVKY+P+SISPEN LLIA
Sbjct: 426 GRMKWVKKHGLNSKLVKYIPASISPENTLLIA 445

The following BLAST results are available for this feature:

BLAST of HG10023067 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008461388.1	1.3e-251	92.78	PREDICTED: tRNA:m(4)X modification enzyme TRM13 homolog isoform X1 [Cucumis melo...	[more]
TYK10359.1	2.3e-251	92.78	tRNA:m(4)X modification enzyme TRM13-like protein isoform X1 [Cucumis melo var. ...	[more]
KAA0058561.1	5.6e-250	92.58	tRNA:m(4)X modification enzyme TRM13-like protein isoform X1 [Cucumis melo var. ...	[more]
XP_022991622.1	1.3e-249	91.23	tRNA:m(4)X modification enzyme TRM13 homolog [Cucurbita maxima]	[more]
KAG7014284.1	2.1e-249	91.45	tRNA:m(4)X modification enzyme TRM13-like protein [Cucurbita argyrosperma subsp....	[more]

BLAST of HG10023067 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q10B19	1.9e-62	50.41	tRNA:m(4)X modification enzyme TRM13 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q8BYH3	1.4e-49	31.19	tRNA:m(4)X modification enzyme TRM13 homolog OS=Mus musculus OX=10090 GN=Trmt13 ...	[more]
Q9NUP7	1.1e-46	29.54	tRNA:m(4)X modification enzyme TRM13 homolog OS=Homo sapiens OX=9606 GN=TRMT13 P...	[more]
Q12383	5.1e-36	25.65	tRNA:m(4)X modification enzyme TRM13 OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]
Q6CP50	3.1e-33	27.35	tRNA:m(4)X modification enzyme TRM13 OS=Kluyveromyces lactis (strain ATCC 8585 /...	[more]

BLAST of HG10023067 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CF14	6.5e-252	92.78	tRNA:m(4)X modification enzyme TRM13 OS=Cucumis melo OX=3656 GN=LOC103499984 PE=...	[more]
A0A5D3CJH7	1.1e-251	92.78	tRNA:m(4)X modification enzyme TRM13 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5A7UYK4	2.7e-250	92.58	tRNA:m(4)X modification enzyme TRM13 OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1JMC6	6.1e-250	91.23	tRNA:m(4)X modification enzyme TRM13 OS=Cucurbita maxima OX=3661 GN=LOC111488184...	[more]
A0A6J1GSU8	1.1e-248	90.79	tRNA:m(4)X modification enzyme TRM13 OS=Cucurbita moschata OX=3662 GN=LOC1114566...	[more]

BLAST of HG10023067 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G01880.1	5.4e-158	60.40	methyltransferases	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021721	Zinc finger, CCCH-type, TRM13	PFAM	PF11722	zf-TRM13_CCCH	coord: 4..30 e-value: 4.1E-12 score: 45.6
IPR022776	TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain	PFAM	PF05253	zf-U11-48K	coord: 38..62 e-value: 2.7E-8 score: 33.5
IPR022776	TRM13/UPF0224 family, U11-48K-like CHHC zinc finger domain	PROSITE	PS51800	ZF_CHHC_U11_48K	coord: 38..65 score: 14.421654
IPR007871	Methyltransferase TRM13	PFAM	PF05206	TRM13	coord: 167..450 e-value: 4.1E-87 score: 292.1
None	No IPR available	PANTHER	PTHR12998:SF0	TRNA:M(4)X MODIFICATION ENZYME TRM13 HOMOLOG	coord: 3..452
IPR039044	tRNA:m(4)X modification enzyme Trm13	PANTHER	PTHR12998	UNCHARACTERIZED	coord: 3..452
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 205..267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10023067.1	HG10023067.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030488	tRNA methylation
biological_process	GO:0008033	tRNA processing
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0106050	tRNA 2'-O-methyltransferase activity
molecular_function	GO:0008168	methyltransferase activity