HG10023038 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10023038
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RNA helicase family protein
Location	Chr05: 30675118 .. 30679123 (+)
RNA-Seq Expression	HG10023038
Synteny	HG10023038

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGCGGAGAGGAAGAGAAAGGTCAGTTTATTTGATGTGGTGGACGAGACCTCGGTATCCGCGAAGATTAACAAAGCAAACGGTGGAGTAGCGGCGTTGAACAATGGCGGTGGAAATGCGGGCAATAGTCTGATCAACAGGTGGACTGGGAGGCAGTTCTCGCAGAGGTACTATGAGATTTTGGAGAAGAGGAAGACTCTGCCTGTTTGGCATCAGAAAGAGGAGTTTTTCCAGGCTTTAAAGAGCAGTCAGACTTTGATTTTGGTTGGTGAGACTGGTAGTGGTAAAACTACTCAGGTTAGTTGGGGAAAGCCTTCTAAAGTTTGACATATAAATGATTGTTTGTTGTCGAGATTGCAAGTAACTTCAGAATAATTCGTAACTTTCTTTTTCTCTTGGGCGCACGCGGTTGGTTTTTTTCATTTACTTGGATTCTTGGGACAATTATTTTGTTTATTGTGATTATTTAGATTCTGTACTTTGTTTGTCAAGCAATTGTCAGGCTTTATTAGGAGTTCTTTGGTTAGAAGGACCTTTACTCTGTAGTTTGATTGAGGGGTAACGCGTTTTTGGTAAGAATTTACATATTTCATCAATCTAGGCCAAAAATATACCTAAAAATGTAAATCTAAGATGTTGTGGTTTGCTTTTTCTTGTTTAAATGCTCGTGGTATATCCTATTTTAGTCCTGAACTTTCATTTTAACCTGTTTTAGTTATTAATTTGCAAGTATTCTATTGCAACAGAATATTTGGACTTGTCCTCCCATGAGAAGGGAACAAAAAATCGGACGACTTTGAATATTGTACACAAAATTTAATCTAGTTATTGTCTTCAAGAAAAAATCTAGCTGGGAACGGACTATATAGATAGTTGAGCTTCACATGTTGCTAGTTTGTTAAGATTTGTGTTTAAAGCAGTATGGGAAGTTCTCCGATTTCTTCAGTTTAAGCTCTTAGATCCCTTCAGGATGGGGCACAGCGACTCCACGCCCCATACCCATTAGTTTCTAGACAATTTGTTTGCTTTTTAGTTAAACTAATGGGTATTTAGTTTGAGATATTCTCTTTCCTATTCTGATTTCTATTCTGGTGATTATACCTGTTACAGATTCCTCAATTTGTTTTAGAAGCCGTTGACCTGGATAGTCCAGATAAACGTAAGAAGATGATGATTGCATGCACTCAGCCTCGTAGGGTCGCAGCAATGTCAGTTTCTAGACGTGTTGCTGAAGAGATGGATGTAACTATTGGAGAAGAGGTGGGTTACAGCATTCGTTTTGAAGACTGCAGTAGTGCTAGAACAGTTTTGAAGTAAGCTCATTCTTCCTAGTACCTGCTCATCAGTGTTGCAACTATCCTTTCACTCGATGATTTGAAATTTTTTTTCTTTACTTGATTCTAAATTTGTTGTACTTTTTATGGGTGGCAGGTATTTGACTGATGGTATGCTTTTAAGAGAAGCGATGACAGATCCTCTATTAGAAAGGTATAAGGTAATTATTCTTGATGAGGCTCATGAAAGAACATTAGCAACGGATGTTCTTTTTGGGCTTTTGAAAGAAGTATTGAAAAATAGGCCTGACCTAAAGCTGGTGGTCATGAGTGCTACACTCGAGGCTGAAAAGTTCCAGGGTTATTTTTATGGTGCTCCACTTATGAAGGTTCCTGGTAGGCTTCATCCAGTGGAAATATTTTACACACAGGAACCCGAAAGGGACTATCTTGAAGCTGCTATTCGGACAGTTGTACAGATTCATTTGTGTGAACCTCCAGGTGATATACTTGTTTTCCTCACTGGTGAGGAGGAAATTGAAGATGCATGTCGCAAAATAAATAAAGAAATTGCAAACCTTGGCGACCAGGTAGGGCCTGTGAAAGTGGTGCCTTTATATTCAACTCTTCCTCCAGCTATGCAGCAGAAGATATTTGAACCTGCTCCACCTCCAGTAAAAGAGGATGGACCTGCTGGAAGGAAGATTGTGGTCTCCACGAACATTGCAGAGACTTCATTGACCATAGACGGCATTGTTTATGTTATTGACCCTGGCTTTTCAAAACAGAAAGTTTATAACCCTCGAGTACGTGTGGAATCATTATTGGTATCTCCTATATCAAAGGCTAGTGCACATCAGAGATCAGGTCGTGCTGGAAGAACTCAGCCCGGAAAATGTTTTAGACTTTACACAGAAAAGAGTTTCCAAAACGATTTGCAGCCACAGACATATCCTGAAATTTTGAGATCAAACCTTGCAAATACTGTTCTTACCTTGAAAAAATTGGGAATTGACGACCTTGTGCATTTTGATTTTATGGATCCACCTGCTCCTGAGACATTGATGCGAGCTTTAGAAGTTCTGAATTACTTGGGTGCTTTGGATGATGATGGGAACCTGACGAAGCTTGGGGAAATAATGAGTGAATTTCCATTAGATCCGCAGATGTCAAAGATGCTCGTTGTTAGTCCTGAATTCAAATGTTCAAATGAAATATTATCAATTTCTGCCATGCTTTCAGGTACTTCAGCACTCTCATTCTTTTTTTTTTAATTTATTTTTTGAACTTTCCCAATTCTATCGAGTTCTATGTAGTGTGTACGTCAGATGCCCATGGTTGTTAAACAAGGGGCAGGATGCATCAAATGTTTGATGCATTTTTCTTGGCGTGGCATGTTTGCAGTATATCTGCCATGTCTTCTAACTAGTAGACATGACGTGAAATCACGTGCATGTTGTTAGAGCACTATTCTGTCAAACTAGGTTGTCATCAGCAACTATCTTCTCTGGTTCCTTGCCCTCAGATGGCATGCACCATAAGATTTCTCAGTCAGTGCTGATGTAGTTAGTTGCAGTTTCTCAGTATTATCTCATGAAGCAAATGGTCTCGTCTTGCATCTATGCATCTGCTGACCTTCCCTGGGCCTCCTGTGTGTGATTACCAATTTCTTTCTTAGTACCCAATTGCTTTGTCCGGCCTAGGGAGGCTCAAAAGGCTGCCGATGAAGCAAAAGCGAGGTTTGGCCACATTGATGGAGATCATCTAACGCTCTTGAACGTGTACCACGCTTACAAGCAAAACAGTAAGTATTAATGGTTCTCACCTTGACCTTTTCAATTAAGCACATCCAATTTTGATGGATTCCTAAACCAATTATTATGTTACAGATGAGGATCAGTCATGGTGCTACGAAAACTTCATCAATCACAGGGCAATGAAGGCTGCAGATAATGTTAGAGAGCAACTAGTCCGCATCATGTCTAGGTTTAACCTCAAATTATGCAGCACAGATTTCAACAGCCGTGACTACTACGTAAACATAAGAAAAGCTATGCTATCTGGGTATTTCATGCAAGTAGCTCATTTGGAACGGACTGGACACTACTTGACAGTGAAGGATAACCAGGTATGGAATGTTGATCCTTTTGACCTTTTCTTATTTTGCTTTTTGGGTATATGATTTTTCTTGGTGTTTTAGGTCATGCTGTATTCTGCATTTTCAGTGCCCGTATTTGGGATTAACAAATCTGTTCTTCAGGTGGTACACTTGCATCCATCGAATTGCTTGGATCATAAACCAGAGTGGGTCATTTACAATGAGTACGTCCTAACGAGCAGGAATTTCATTCGTACAGTGACAGATATCCGGGGTGAATGGTGAGTTCCTCTTTGGTATAATGTTAAATGTTTGAATCCAGAAACAAGTCTATTTGTATACTTGTGGTCTTATGCATACTTTGCTACACATGATGCAAGGGTTTGTTTCCTTTACTTTCAATAGTAACTAAGTTAATAGCAATAATATTGATCTATTCATCTGAGTAATTGTCATTATTTAGAGGCCTTGATGGATTATCTTGCAAATTTCTTGTCCCAACAGGCTGGTGGACATAGCAGCGCACTATTATGATCTGGAAAACTTCCCTCAATGTGAGGCTAAGCGTGTTCTCGAAAGGCTTTACAAGAAGCGGGAAAAGGATCGTGAAGAAAGCAGGAATAGAAAATGA

mRNA sequence

ATGGGTGCGGAGAGGAAGAGAAAGGTCAGTTTATTTGATGTGGTGGACGAGACCTCGGTATCCGCGAAGATTAACAAAGCAAACGGTGGAGTAGCGGCGTTGAACAATGGCGGTGGAAATGCGGGCAATAGTCTGATCAACAGGTGGACTGGGAGGCAGTTCTCGCAGAGGTACTATGAGATTTTGGAGAAGAGGAAGACTCTGCCTGTTTGGCATCAGAAAGAGGAGTTTTTCCAGGCTTTAAAGAGCAGTCAGACTTTGATTTTGGTTGGTGAGACTGGTAGTGGTAAAACTACTCAGATTCCTCAATTTGTTTTAGAAGCCGTTGACCTGGATAGTCCAGATAAACGTAAGAAGATGATGATTGCATGCACTCAGCCTCGTAGGGTCGCAGCAATGTCAGTTTCTAGACGTGTTGCTGAAGAGATGGATGTAACTATTGGAGAAGAGGTGGGTTACAGCATTCGTTTTGAAGACTGCAGTAGTGCTAGAACAGTTTTGAAGTATTTGACTGATGGTATGCTTTTAAGAGAAGCGATGACAGATCCTCTATTAGAAAGGTATAAGGTAATTATTCTTGATGAGGCTCATGAAAGAACATTAGCAACGGATGTTCTTTTTGGGCTTTTGAAAGAAGTATTGAAAAATAGGCCTGACCTAAAGCTGGTGGTCATGAGTGCTACACTCGAGGCTGAAAAGTTCCAGGGTTATTTTTATGGTGCTCCACTTATGAAGGTTCCTGGTAGGCTTCATCCAGTGGAAATATTTTACACACAGGAACCCGAAAGGGACTATCTTGAAGCTGCTATTCGGACAGTTGTACAGATTCATTTGTGTGAACCTCCAGGTGATATACTTGTTTTCCTCACTGGTGAGGAGGAAATTGAAGATGCATGTCGCAAAATAAATAAAGAAATTGCAAACCTTGGCGACCAGGTAGGGCCTGTGAAAGTGGTGCCTTTATATTCAACTCTTCCTCCAGCTATGCAGCAGAAGATATTTGAACCTGCTCCACCTCCAGTAAAAGAGGATGGACCTGCTGGAAGGAAGATTGTGGTCTCCACGAACATTGCAGAGACTTCATTGACCATAGACGGCATTGTTTATGTTATTGACCCTGGCTTTTCAAAACAGAAAGTTTATAACCCTCGAGTACGTGTGGAATCATTATTGGTATCTCCTATATCAAAGGCTAGTGCACATCAGAGATCAGGTCGTGCTGGAAGAACTCAGCCCGGAAAATGTTTTAGACTTTACACAGAAAAGAGTTTCCAAAACGATTTGCAGCCACAGACATATCCTGAAATTTTGAGATCAAACCTTGCAAATACTGTTCTTACCTTGAAAAAATTGGGAATTGACGACCTTGTGCATTTTGATTTTATGGATCCACCTGCTCCTGAGACATTGATGCGAGCTTTAGAAGTTCTGAATTACTTGGGTGCTTTGGATGATGATGGGAACCTGACGAAGCTTGGGGAAATAATGAGTGAATTTCCATTAGATCCGCAGATGTCAAAGATGCTCGTTGTTAGTCCTGAATTCAAATGTTCAAATGAAATATTATCAATTTCTGCCATGCTTTCAGTACCCAATTGCTTTGTCCGGCCTAGGGAGGCTCAAAAGGCTGCCGATGAAGCAAAAGCGAGGTTTGGCCACATTGATGGAGATCATCTAACGCTCTTGAACGTGTACCACGCTTACAAGCAAAACAATGAGGATCAGTCATGGTGCTACGAAAACTTCATCAATCACAGGGCAATGAAGGCTGCAGATAATGTTAGAGAGCAACTAGTCCGCATCATGTCTAGGTTTAACCTCAAATTATGCAGCACAGATTTCAACAGCCGTGACTACTACGTAAACATAAGAAAAGCTATGCTATCTGGGTATTTCATGCAAGTAGCTCATTTGGAACGGACTGGACACTACTTGACAGTGAAGGATAACCAGGTGGTACACTTGCATCCATCGAATTGCTTGGATCATAAACCAGAGTGGGTCATTTACAATGAGTACGTCCTAACGAGCAGGAATTTCATTCGTACAGTGACAGATATCCGGGGTGAATGGCTGGTGGACATAGCAGCGCACTATTATGATCTGGAAAACTTCCCTCAATGTGAGGCTAAGCGTGTTCTCGAAAGGCTTTACAAGAAGCGGGAAAAGGATCGTGAAGAAAGCAGGAATAGAAAATGA

Coding sequence (CDS)

ATGGGTGCGGAGAGGAAGAGAAAGGTCAGTTTATTTGATGTGGTGGACGAGACCTCGGTATCCGCGAAGATTAACAAAGCAAACGGTGGAGTAGCGGCGTTGAACAATGGCGGTGGAAATGCGGGCAATAGTCTGATCAACAGGTGGACTGGGAGGCAGTTCTCGCAGAGGTACTATGAGATTTTGGAGAAGAGGAAGACTCTGCCTGTTTGGCATCAGAAAGAGGAGTTTTTCCAGGCTTTAAAGAGCAGTCAGACTTTGATTTTGGTTGGTGAGACTGGTAGTGGTAAAACTACTCAGATTCCTCAATTTGTTTTAGAAGCCGTTGACCTGGATAGTCCAGATAAACGTAAGAAGATGATGATTGCATGCACTCAGCCTCGTAGGGTCGCAGCAATGTCAGTTTCTAGACGTGTTGCTGAAGAGATGGATGTAACTATTGGAGAAGAGGTGGGTTACAGCATTCGTTTTGAAGACTGCAGTAGTGCTAGAACAGTTTTGAAGTATTTGACTGATGGTATGCTTTTAAGAGAAGCGATGACAGATCCTCTATTAGAAAGGTATAAGGTAATTATTCTTGATGAGGCTCATGAAAGAACATTAGCAACGGATGTTCTTTTTGGGCTTTTGAAAGAAGTATTGAAAAATAGGCCTGACCTAAAGCTGGTGGTCATGAGTGCTACACTCGAGGCTGAAAAGTTCCAGGGTTATTTTTATGGTGCTCCACTTATGAAGGTTCCTGGTAGGCTTCATCCAGTGGAAATATTTTACACACAGGAACCCGAAAGGGACTATCTTGAAGCTGCTATTCGGACAGTTGTACAGATTCATTTGTGTGAACCTCCAGGTGATATACTTGTTTTCCTCACTGGTGAGGAGGAAATTGAAGATGCATGTCGCAAAATAAATAAAGAAATTGCAAACCTTGGCGACCAGGTAGGGCCTGTGAAAGTGGTGCCTTTATATTCAACTCTTCCTCCAGCTATGCAGCAGAAGATATTTGAACCTGCTCCACCTCCAGTAAAAGAGGATGGACCTGCTGGAAGGAAGATTGTGGTCTCCACGAACATTGCAGAGACTTCATTGACCATAGACGGCATTGTTTATGTTATTGACCCTGGCTTTTCAAAACAGAAAGTTTATAACCCTCGAGTACGTGTGGAATCATTATTGGTATCTCCTATATCAAAGGCTAGTGCACATCAGAGATCAGGTCGTGCTGGAAGAACTCAGCCCGGAAAATGTTTTAGACTTTACACAGAAAAGAGTTTCCAAAACGATTTGCAGCCACAGACATATCCTGAAATTTTGAGATCAAACCTTGCAAATACTGTTCTTACCTTGAAAAAATTGGGAATTGACGACCTTGTGCATTTTGATTTTATGGATCCACCTGCTCCTGAGACATTGATGCGAGCTTTAGAAGTTCTGAATTACTTGGGTGCTTTGGATGATGATGGGAACCTGACGAAGCTTGGGGAAATAATGAGTGAATTTCCATTAGATCCGCAGATGTCAAAGATGCTCGTTGTTAGTCCTGAATTCAAATGTTCAAATGAAATATTATCAATTTCTGCCATGCTTTCAGTACCCAATTGCTTTGTCCGGCCTAGGGAGGCTCAAAAGGCTGCCGATGAAGCAAAAGCGAGGTTTGGCCACATTGATGGAGATCATCTAACGCTCTTGAACGTGTACCACGCTTACAAGCAAAACAATGAGGATCAGTCATGGTGCTACGAAAACTTCATCAATCACAGGGCAATGAAGGCTGCAGATAATGTTAGAGAGCAACTAGTCCGCATCATGTCTAGGTTTAACCTCAAATTATGCAGCACAGATTTCAACAGCCGTGACTACTACGTAAACATAAGAAAAGCTATGCTATCTGGGTATTTCATGCAAGTAGCTCATTTGGAACGGACTGGACACTACTTGACAGTGAAGGATAACCAGGTGGTACACTTGCATCCATCGAATTGCTTGGATCATAAACCAGAGTGGGTCATTTACAATGAGTACGTCCTAACGAGCAGGAATTTCATTCGTACAGTGACAGATATCCGGGGTGAATGGCTGGTGGACATAGCAGCGCACTATTATGATCTGGAAAACTTCCCTCAATGTGAGGCTAAGCGTGTTCTCGAAAGGCTTTACAAGAAGCGGGAAAAGGATCGTGAAGAAAGCAGGAATAGAAAATGA

Protein sequence

MGAERKRKVSLFDVVDETSVSAKINKANGGVAALNNGGGNAGNSLINRWTGRQFSQRYYEILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACRKINKEIANLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVRIMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAAHYYDLENFPQCEAKRVLERLYKKREKDREESRNRK

Homology

[Close]

BLAST of HG10023038 vs. NCBI nr
Match: XP_038899479.1 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1 [Benincasa hispida])

HSP 1 Score: 1451.0 bits (3755), Expect = 0.0e+00
Identity = 730/732 (99.73%), Postives = 731/732 (99.86%), Query Frame = 0


Query: 1   MGAERKRKVSLFDVVDETSVSAKINKANGGVAALNNGGGNAGNSLINRWTGRQFSQRYYE 60
           MGAERKRKVSLFDVVDETSVSAKINKANGGVA+LNNGGGNAGNSLINRWTGRQFSQRYYE
Sbjct: 1   MGAERKRKVSLFDVVDETSVSAKINKANGGVASLNNGGGNAGNSLINRWTGRQFSQRYYE 60

Query: 61  ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM 120
           ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM
Sbjct: 61  ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM 120

Query: 121 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 180
           MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM
Sbjct: 121 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 180

Query: 181 TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 240
           TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYF G
Sbjct: 181 TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFNG 240

Query: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR 300
           APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR
Sbjct: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR 300

Query: 301 KINKEIANLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET 360
           KINKEIANLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET
Sbjct: 301 KINKEIANLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET 360

Query: 361 SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 420
           SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT
Sbjct: 361 SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 420

Query: 421 EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480
           EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL
Sbjct: 421 EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480

Query: 481 GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA 540
           GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA
Sbjct: 481 GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA 540

Query: 541 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR 600
           QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR
Sbjct: 541 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR 600

Query: 601 IMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660
           IMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC
Sbjct: 601 IMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660

Query: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAAHYYDLENFPQCEAKRVLERLYKK 720
           LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAAHYYDLENFPQCEAKRVLERLYKK
Sbjct: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAAHYYDLENFPQCEAKRVLERLYKK 720

Query: 721 REKDREESRNRK 733
           REKDREESRNRK
Sbjct: 721 REKDREESRNRK 732

[Close]

BLAST of HG10023038 vs. NCBI nr
Match: XP_008451444.1 (PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 [Cucumis melo] >KAA0046711.1 putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 [Cucumis melo var. makuwa] >TYK18247.1 putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 [Cucumis melo var. makuwa])

HSP 1 Score: 1446.8 bits (3744), Expect = 0.0e+00
Identity = 725/732 (99.04%), Postives = 728/732 (99.45%), Query Frame = 0


Query: 1   MGAERKRKVSLFDVVDETSVSAKINKANGGVAALNNGGGNAGNSLINRWTGRQFSQRYYE 60
           MGAERKRKVSLFDVVDETSVSAK+NK NGGVA LNNGGGNAGNSLINRWTGRQFSQRYYE
Sbjct: 1   MGAERKRKVSLFDVVDETSVSAKLNKVNGGVAPLNNGGGNAGNSLINRWTGRQFSQRYYE 60

Query: 61  ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM 120
           ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM
Sbjct: 61  ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM 120

Query: 121 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 180
           M+ACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM
Sbjct: 121 MVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 180

Query: 181 TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 240
           TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG
Sbjct: 181 TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 240

Query: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR 300
           APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR
Sbjct: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR 300

Query: 301 KINKEIANLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET 360
           KINKEI NLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET
Sbjct: 301 KINKEIGNLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET 360

Query: 361 SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 420
           SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT
Sbjct: 361 SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 420

Query: 421 EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480
           EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL
Sbjct: 421 EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480

Query: 481 GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA 540
           GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA
Sbjct: 481 GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA 540

Query: 541 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR 600
           QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR
Sbjct: 541 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR 600

Query: 601 IMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660
           IMSRFNLKLCSTDFNSRDYY NIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC
Sbjct: 601 IMSRFNLKLCSTDFNSRDYYANIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660

Query: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAAHYYDLENFPQCEAKRVLERLYKK 720
           LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIA+HYYDLENFPQCEAKRVLERLYKK
Sbjct: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIASHYYDLENFPQCEAKRVLERLYKK 720

Query: 721 REKDREESRNRK 733
           REKDREESRNRK
Sbjct: 721 REKDREESRNRK 732

[Close]

BLAST of HG10023038 vs. NCBI nr
Match: XP_004135980.1 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 [Cucumis sativus] >KGN45034.1 hypothetical protein Csa_016509 [Cucumis sativus])

HSP 1 Score: 1443.7 bits (3736), Expect = 0.0e+00
Identity = 722/732 (98.63%), Postives = 728/732 (99.45%), Query Frame = 0


Query: 1   MGAERKRKVSLFDVVDETSVSAKINKANGGVAALNNGGGNAGNSLINRWTGRQFSQRYYE 60
           MGAERKRKVSLFDVVDETSVSAK+NK NGGVA LNNGGGNAGNSLINRWTGRQFSQRYYE
Sbjct: 1   MGAERKRKVSLFDVVDETSVSAKLNKVNGGVAPLNNGGGNAGNSLINRWTGRQFSQRYYE 60

Query: 61  ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM 120
           ILEKRKTLPVWHQKEEFFQ LKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM
Sbjct: 61  ILEKRKTLPVWHQKEEFFQVLKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM 120

Query: 121 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 180
           M+ACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM
Sbjct: 121 MVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 180

Query: 181 TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 240
           TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG
Sbjct: 181 TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 240

Query: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR 300
           APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR
Sbjct: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR 300

Query: 301 KINKEIANLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET 360
           KINKEI NLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET
Sbjct: 301 KINKEIGNLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET 360

Query: 361 SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 420
           SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT
Sbjct: 361 SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 420

Query: 421 EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480
           EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL
Sbjct: 421 EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480

Query: 481 GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA 540
           GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILS+SAMLSVPNCFVRPREA
Sbjct: 481 GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSVSAMLSVPNCFVRPREA 540

Query: 541 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR 600
           QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR
Sbjct: 541 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR 600

Query: 601 IMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660
           IMSRFNLKLCSTDFN+R+YYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC
Sbjct: 601 IMSRFNLKLCSTDFNNREYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660

Query: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAAHYYDLENFPQCEAKRVLERLYKK 720
           LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIA+HYYDLENFPQCEAKRVLERLYKK
Sbjct: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIASHYYDLENFPQCEAKRVLERLYKK 720

Query: 721 REKDREESRNRK 733
           REKDREESRNRK
Sbjct: 721 REKDREESRNRK 732

[Close]

BLAST of HG10023038 vs. NCBI nr
Match: XP_022146947.1 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1 [Momordica charantia])

HSP 1 Score: 1439.1 bits (3724), Expect = 0.0e+00
Identity = 721/732 (98.50%), Postives = 728/732 (99.45%), Query Frame = 0


Query: 1   MGAERKRKVSLFDVVDETSVSAKINKANGGVAALNNGGGNAGNSLINRWTGRQFSQRYYE 60
           MGAERKRKVSLFDVVDETSVSAKINK+NGG AALNNGGGNAGNSLINRWTGR FSQRYYE
Sbjct: 1   MGAERKRKVSLFDVVDETSVSAKINKSNGGGAALNNGGGNAGNSLINRWTGRPFSQRYYE 60

Query: 61  ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM 120
           ILEKR+TLPVWHQKEEFFQALK+SQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM
Sbjct: 61  ILEKRETLPVWHQKEEFFQALKASQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM 120

Query: 121 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 180
           M+ACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM
Sbjct: 121 MVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 180

Query: 181 TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 240
           TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYF+G
Sbjct: 181 TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFFG 240

Query: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR 300
           APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR
Sbjct: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR 300

Query: 301 KINKEIANLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET 360
           KINKEI NLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGP GRKIVVSTNIAET
Sbjct: 301 KINKEIGNLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPPGRKIVVSTNIAET 360

Query: 361 SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 420
           SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT
Sbjct: 361 SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 420

Query: 421 EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480
           EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL
Sbjct: 421 EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480

Query: 481 GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA 540
           GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA
Sbjct: 481 GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA 540

Query: 541 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR 600
           QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR
Sbjct: 541 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR 600

Query: 601 IMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660
           IMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC
Sbjct: 601 IMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660

Query: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAAHYYDLENFPQCEAKRVLERLYKK 720
           LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIA+HYYDL+NFPQCEAKRVLERLYKK
Sbjct: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIASHYYDLDNFPQCEAKRVLERLYKK 720

Query: 721 REKDREESRNRK 733
           REKDREESRNRK
Sbjct: 721 REKDREESRNRK 732

[Close]

BLAST of HG10023038 vs. NCBI nr
Match: XP_022953686.1 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 1420.2 bits (3675), Expect = 0.0e+00
Identity = 711/732 (97.13%), Postives = 725/732 (99.04%), Query Frame = 0


Query: 1   MGAERKRKVSLFDVVDETSVSAKINKANGGVAALNNGGGNAGNSLINRWTGRQFSQRYYE 60
           MGAERKRKVSLFDVVD+TSVS KI+K+NGG AALNNGGGNAGNSLINRWTGRQ+SQRY+E
Sbjct: 1   MGAERKRKVSLFDVVDDTSVSPKIHKSNGGGAALNNGGGNAGNSLINRWTGRQYSQRYFE 60

Query: 61  ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM 120
           ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM
Sbjct: 61  ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM 120

Query: 121 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 180
           M+ACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM
Sbjct: 121 MVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 180

Query: 181 TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 240
           TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYF G
Sbjct: 181 TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFNG 240

Query: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR 300
           APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEP GDILVFLTGEEEIEDACR
Sbjct: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPIGDILVFLTGEEEIEDACR 300

Query: 301 KINKEIANLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET 360
           KINKEI+NLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGP GRKIVVSTNIAET
Sbjct: 301 KINKEISNLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPPGRKIVVSTNIAET 360

Query: 361 SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 420
           SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT
Sbjct: 361 SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 420

Query: 421 EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480
           E+SFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL
Sbjct: 421 ERSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480

Query: 481 GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA 540
           GALDD+GNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA
Sbjct: 481 GALDDEGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA 540

Query: 541 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR 600
           QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMK+ADNVREQLVR
Sbjct: 541 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKSADNVREQLVR 600

Query: 601 IMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660
           IM+RFNLKLCSTDFNSR+YYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC
Sbjct: 601 IMARFNLKLCSTDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660

Query: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAAHYYDLENFPQCEAKRVLERLYKK 720
           LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVD+AAHYYDL NFP CEAKRVLE+LYKK
Sbjct: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVAAHYYDLANFPLCEAKRVLEKLYKK 720

Query: 721 REKDREESRNRK 733
           REKDREESRNRK
Sbjct: 721 REKDREESRNRK 732

[Close]

BLAST of HG10023038 vs. ExPASy Swiss-Prot
Match: Q9LZQ9 (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 OS=Arabidopsis thaliana OX=3702 GN=At3g62310 PE=2 SV=1)

HSP 1 Score: 1298.1 bits (3358), Expect = 0.0e+00
Identity = 643/733 (87.72%), Postives = 691/733 (94.27%), Query Frame = 0


Query: 1   MGAERKRKVSLFDVVDETSVSAKINKANGGVAALNNGGGNAGNSLINRWTGRQFSQRYYE 60
           MG ERKRK+SLFDV+D+ S  AK  K +G    L +GG    NSLIN+W G+ +SQRYY+
Sbjct: 1   MGTERKRKISLFDVMDDPSAPAKNAKTSG----LPDGG---INSLINKWNGKPYSQRYYD 60

Query: 61  ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM 120
           ILEKR+TLPVW QKEEF + L ++QTLILVGETGSGKTTQIPQFV++AVD ++ DKR+K 
Sbjct: 61  ILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKW 120

Query: 121 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 180
           ++ CTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSS RTVLKYLTDGMLLREAM
Sbjct: 121 LVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAM 180

Query: 181 TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 240
            DPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQ YF G
Sbjct: 181 ADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSG 240

Query: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR 300
           APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH+CEPPGDILVFLTGEEEIEDACR
Sbjct: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACR 300

Query: 301 KINKEIANLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET 360
           KINKE+ NLGDQVGP+KVVPLYSTLPPAMQQKIF+PAP PV E GP GRKIVVSTNIAET
Sbjct: 301 KINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAET 360

Query: 361 SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 420
           SLTIDGIVYVIDPGF+KQKVYNPR+RVESLLVSPISKASAHQRSGRAGRT+PGKCFRLYT
Sbjct: 361 SLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYT 420

Query: 421 EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480
           EKSF NDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL
Sbjct: 421 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480

Query: 481 GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA 540
           GALDDDGNLTK GEIMSEFPLDPQM+KML+VSPEF CSNEILS+SAMLSVPNCF+RPREA
Sbjct: 481 GALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCFIRPREA 540

Query: 541 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR 600
           QKAADEAKARFGHI+GDHLTLLNVYHA+KQNNED +WCYENFIN+RAMK+ADNVR+QLVR
Sbjct: 541 QKAADEAKARFGHIEGDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSADNVRQQLVR 600

Query: 601 IMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660
           IMSRFNLK+CSTDFNSRDYY+NIRKAML+GYFMQVAHLERTGHYLTVKDNQVVHLHPSNC
Sbjct: 601 IMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660

Query: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAAHYYDLENFPQCEAKRVLERLYKK 720
           LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVD+A+HYYDL NFP CEAKRV+E+LYKK
Sbjct: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVASHYYDLSNFPNCEAKRVIEKLYKK 720

Query: 721 REKDREES-RNRK 733
           RE+++EES +NRK
Sbjct: 721 REREKEESKKNRK 726

[Close]

BLAST of HG10023038 vs. ExPASy Swiss-Prot
Match: O22899 (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 OS=Arabidopsis thaliana OX=3702 GN=At2g47250 PE=2 SV=1)

HSP 1 Score: 1293.9 bits (3347), Expect = 0.0e+00
Identity = 639/733 (87.18%), Postives = 691/733 (94.27%), Query Frame = 0


Query: 1   MGAERKRKVSLFDVVDETSVSAKINKANG-GVAALNNGGGNAGNSLINRWTGRQFSQRYY 60
           MG ERKRKVSLFDV+++ S+S+K  K+NG G+AA   GG N    LIN+W G+ +SQRY+
Sbjct: 1   MGTERKRKVSLFDVMEDPSLSSKNTKSNGLGLAAAAGGGSN----LINKWNGKAYSQRYF 60

Query: 61  EILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKK 120
           EILEKR+ LPVW QK++F   L S+QTLILVGETGSGKTTQIPQFVL+AV  D+ DK +K
Sbjct: 61  EILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRK 120

Query: 121 MMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREA 180
            ++ CTQPRRVAAMSVSRRVA+EMDV+IGEEVGYSIRFEDC+S+RT+LKYLTDGMLLREA
Sbjct: 121 WLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREA 180

Query: 181 MTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY 240
           M DPLLERYKVIILDEAHERTLATDVLFGLLKEVL+NRPDLKLVVMSATLEAEKFQ YF 
Sbjct: 181 MADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFS 240

Query: 241 GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDAC 300
           GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH+CEPPGDILVFLTGEEEIEDAC
Sbjct: 241 GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDAC 300

Query: 301 RKINKEIANLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAE 360
           RKINKE++NLGDQVGPVKVVPLYSTLPPAMQQKIF+PAP P+ E GPAGRKIVVSTNIAE
Sbjct: 301 RKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAE 360

Query: 361 TSLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLY 420
           TSLTIDGIVYVIDPGF+KQKVYNPR+RVESLLVSPISKASAHQRSGRAGRT+PGKCFRLY
Sbjct: 361 TSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLY 420

Query: 421 TEKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 480
           TEKSF NDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY
Sbjct: 421 TEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 480

Query: 481 LGALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPRE 540
           LGALDD+GNLTK GEIMSEFPLDPQMSKML+VSPEF CSNEILS+SAMLSVPNCFVRPRE
Sbjct: 481 LGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFVRPRE 540

Query: 541 AQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLV 600
           AQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNED +WC+ENF+N+RAMK+ADNVR+QLV
Sbjct: 541 AQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQLV 600

Query: 601 RIMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSN 660
           RIMSRFNLK+CSTDFNSRDYYVNIRKAML+GYFMQVAHLERTGHYLTVKDNQVVHLHPSN
Sbjct: 601 RIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSN 660

Query: 661 CLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAAHYYDLENFPQCEAKRVLERLYK 720
           CLDHKPEWVIYNEYVLT+RNFIRTVTDIRGEWLVD+A HYYDL NFP CEAKR LE+LYK
Sbjct: 661 CLDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSNFPNCEAKRALEKLYK 720

Query: 721 KREKDREESRNRK 733
           KRE+++ ES+NRK
Sbjct: 721 KREREKNESKNRK 729

[Close]

BLAST of HG10023038 vs. ExPASy Swiss-Prot
Match: O35286 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Mus musculus OX=10090 GN=Dhx15 PE=1 SV=2)

HSP 1 Score: 1000.0 bits (2584), Expect = 1.4e-290
Identity = 484/677 (71.49%), Postives = 581/677 (85.82%), Query Frame = 0


Query: 46  INRWTGRQFSQRYYEILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFV 105
           IN +T    + RYY+IL+KR  LPVW  K+ F   L   Q+ +LVGETGSGKTTQIPQ+ 
Sbjct: 115 INPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWC 174

Query: 106 LEAV-DLDSPDKRKKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSAR 165
           +E +  L  P    K  +ACTQPRRVAAMSV++RVA+EMDV +G+EVGYSIRFEDCSSA+
Sbjct: 175 VEYMRSLPGP----KRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAK 234

Query: 166 TVLKYLTDGMLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVV 225
           T+LKY+TDGMLLREAM DPLLERY VIILDEAHERTLATD+L G+LKEV++ R DLK++V
Sbjct: 235 TILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIV 294

Query: 226 MSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLC-EPPG 285
           MSATL+A KFQ YF   PL+ +PGR HPVEIFYT EPERDYLEAAIRTV+QIH+C E  G
Sbjct: 295 MSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEG 354

Query: 286 DILVFLTGEEEIEDACRKINKEIANLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKE 345
           D+L+FLTG+EEI++AC++I +E+ +LG +VG +K++PLYSTLPP  QQ+IFEP PPP K+
Sbjct: 355 DLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEP-PPPKKQ 414

Query: 346 DGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQR 405
           +G  GRK+VVSTNIAETSLTIDG+V+VIDPGF+KQKVYNPR+RVESLLV+ ISKASA QR
Sbjct: 415 NGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQR 474

Query: 406 SGRAGRTQPGKCFRLYTEKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMD 465
           +GRAGRT+PGKCFRLYTEK+++ ++Q  TYPEILRSNL + VL LKKLGIDDLVHFDFMD
Sbjct: 475 AGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMD 534

Query: 466 PPAPETLMRALEVLNYLGALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILS 525
           PPAPETLMRALE+LNYL AL+DDG+LT+LG +M+EFPLDPQ++KM++ S ++ CSNE+LS
Sbjct: 535 PPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLS 594

Query: 526 ISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFI 585
           I+AMLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVYHA+KQN+E   WCY+NFI
Sbjct: 595 ITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFI 654

Query: 586 NHRAMKAADNVREQLVRIMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGH 645
           N+R++ +ADNVR+QL RIM RFNL   STDF SRDYY+NIRKA+++GYFMQVAHLERTGH
Sbjct: 655 NYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGH 714

Query: 646 YLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAAHYYDLE 705
           YLTVKDNQVV LHPS  LDHKPEWV+YNE+VLT++N+IRT TDI+ EWLV IA  YYD+ 
Sbjct: 715 YLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMS 774

Query: 706 NFPQCEAKRVLERLYKK 721
           NFPQCEAKR L+R+  K
Sbjct: 775 NFPQCEAKRQLDRIIAK 786

[Close]

BLAST of HG10023038 vs. ExPASy Swiss-Prot
Match: O43143 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Homo sapiens OX=9606 GN=DHX15 PE=1 SV=2)

HSP 1 Score: 998.8 bits (2581), Expect = 3.2e-290
Identity = 488/695 (70.22%), Postives = 590/695 (84.89%), Query Frame = 0


Query: 32  AALNNGGGNAGNS----LINRWTGRQFSQRYYEILEKRKTLPVWHQKEEFFQALKSSQTL 91
           +A +   G+AG++     IN +T    + RYY+IL+KR  LPVW  K+ F   L   Q+ 
Sbjct: 97  SAHSTHAGHAGHTSLPQCINPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSF 156

Query: 92  ILVGETGSGKTTQIPQFVLEAV-DLDSPDKRKKMMIACTQPRRVAAMSVSRRVAEEMDVT 151
           +LVGETGSGKTTQIPQ+ +E +  L  P    K  +ACTQPRRVAAMSV++RVA+EMDV 
Sbjct: 157 VLVGETGSGKTTQIPQWCVEYMRSLPGP----KRGVACTQPRRVAAMSVAQRVADEMDVM 216

Query: 152 IGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIILDEAHERTLATDVL 211
           +G+EVGYSIRFEDCSSA+T+LKY+TDGMLLREAM DPLLERY VIILDEAHERTLATD+L
Sbjct: 217 LGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTLATDIL 276

Query: 212 FGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYL 271
            G+LKEV++ R DLK++VMSATL+A KFQ YF   PL+ +PGR HPVEIFYT EPERDYL
Sbjct: 277 MGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTPEPERDYL 336

Query: 272 EAAIRTVVQIHLC-EPPGDILVFLTGEEEIEDACRKINKEIANLGDQVGPVKVVPLYSTL 331
           EAAIRTV+QIH+C E  GD+L+FLTG+EEI++AC++I +E+ +LG +VG +K++PLYSTL
Sbjct: 337 EAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTL 396

Query: 332 PPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRV 391
           PP  QQ+IFEP PPP K++G  GRK+VVSTNIAETSLTIDG+V+VIDPGF+KQKVYNPR+
Sbjct: 397 PPQQQQRIFEP-PPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRI 456

Query: 392 RVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFQNDLQPQTYPEILRSNLANTV 451
           RVESLLV+ ISKASA QR+GRAGRT+PGKCFRLYTEK+++ ++Q  TYPEILRSNL + V
Sbjct: 457 RVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVV 516

Query: 452 LTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTKLGEIMSEFPLDPQM 511
           L LKKLGIDDLVHFDFMDPPAPETLMRALE+LNYL AL+DDG+LT+LG +M+EFPLDPQ+
Sbjct: 517 LQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQL 576

Query: 512 SKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDHLTLLNVY 571
           +KM++ S ++ CSNE+LSI+AMLSVP CFVRP EA+KAADEAK RF HIDGDHLTLLNVY
Sbjct: 577 AKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDHLTLLNVY 636

Query: 572 HAYKQNNEDQSWCYENFINHRAMKAADNVREQLVRIMSRFNLKLCSTDFNSRDYYVNIRK 631
           HA+KQN+E   WCY+NFIN+R++ +ADNVR+QL RIM RFNL   STDF SRDYY+NIRK
Sbjct: 637 HAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRK 696

Query: 632 AMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSRNFIRTVT 691
           A+++GYFMQVAHLERTGHYLTVKDNQVV LHPS  LDHKPEWV+YNE+VLT++N+IRT T
Sbjct: 697 ALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCT 756

Query: 692 DIRGEWLVDIAAHYYDLENFPQCEAKRVLERLYKK 721
           DI+ EWLV IA  YYD+ NFPQCEAKR L+R+  K
Sbjct: 757 DIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAK 786

[Close]

BLAST of HG10023038 vs. ExPASy Swiss-Prot
Match: Q5RAZ4 (Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Pongo abelii OX=9601 GN=DHX15 PE=2 SV=2)

HSP 1 Score: 998.0 bits (2579), Expect = 5.4e-290
Identity = 489/702 (69.66%), Postives = 593/702 (84.47%), Query Frame = 0


Query: 25  NKANGGVAALNNGGGNAGNS----LINRWTGRQFSQRYYEILEKRKTLPVWHQKEEFFQA 84
           + A+   +A +   G+AG++     IN +T    + RYY+IL+KR  LPVW  K+ F   
Sbjct: 90  HSAHSTHSAHSTHAGHAGHTSLPQCINPFTNLPHTPRYYDILKKRLQLPVWEYKDRFTDI 149

Query: 85  LKSSQTLILVGETGSGKTTQIPQFVLEAV-DLDSPDKRKKMMIACTQPRRVAAMSVSRRV 144
           L   Q+ +LVGETGSGKTTQIPQ+ +E +  L  P    K  +ACTQPRRVAAMSV++RV
Sbjct: 150 LVRHQSFVLVGETGSGKTTQIPQWCVEYMRSLPGP----KRGVACTQPRRVAAMSVAQRV 209

Query: 145 AEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAMTDPLLERYKVIILDEAHER 204
           A+EMDV +G+EVGYSIRFEDCSSA+T+LKY+TDGMLLREAM DPLLERY VIILDEAHER
Sbjct: 210 ADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHER 269

Query: 205 TLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYGAPLMKVPGRLHPVEIFYTQ 264
           TLATD+L G+LKEV++ R DLK++VMSATL+A KFQ YF   PL+ +PGR HPVEIFYT 
Sbjct: 270 TLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQIYFDNCPLLTIPGRTHPVEIFYTP 329

Query: 265 EPERDYLEAAIRTVVQIHLC-EPPGDILVFLTGEEEIEDACRKINKEIANLGDQVGPVKV 324
           EPERDYLEAAIRTV+QIH+C E  GD+L+FLTG+EEI++AC++I +E+ +LG +VG +K+
Sbjct: 330 EPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKI 389

Query: 325 VPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFSKQ 384
           +PLYSTLPP  QQ+IFEP PPP K++G  GRK+VVSTNIAETSLTIDG+V+VIDPGF+KQ
Sbjct: 390 IPLYSTLPPQQQQRIFEP-PPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQ 449

Query: 385 KVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYTEKSFQNDLQPQTYPEILR 444
           KVYNPR+RVESLLV+ ISKASA QR+GRAGRT+PGKCFRLYTEK+++ ++Q  TYPEILR
Sbjct: 450 KVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILR 509

Query: 445 SNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYLGALDDDGNLTKLGEIMSE 504
           SNL + VL LKKLGIDDLVHFDFMDPPAPETLMRALE+LNYL AL+DDG+LT+LG +M+E
Sbjct: 510 SNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAE 569

Query: 505 FPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREAQKAADEAKARFGHIDGDH 564
           FPLDPQ++KM++ S ++ CSNE+LSI+AMLSVP CFVRP EA+KAADEAK RF HIDGDH
Sbjct: 570 FPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCFVRPTEAKKAADEAKMRFAHIDGDH 629

Query: 565 LTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVRIMSRFNLKLCSTDFNSRD 624
           LTLLNVYHA+KQN+E   WCY+NFIN+R++ +ADNVR+QL RIM RFNL   STDF SRD
Sbjct: 630 LTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRD 689

Query: 625 YYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNCLDHKPEWVIYNEYVLTSR 684
           YY+NIRKA+++GYFMQVAHLERTGHYLTVKDNQVV LHPS  LDHKPEWV+YNE+VLT++
Sbjct: 690 YYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTK 749

Query: 685 NFIRTVTDIRGEWLVDIAAHYYDLENFPQCEAKRVLERLYKK 721
           N+IRT TDI+ EWLV IA  YYD+ NFPQCEAKR L+R+  K
Sbjct: 750 NYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQLDRIIAK 786

[Close]

BLAST of HG10023038 vs. ExPASy TrEMBL
Match: A0A5A7TZE6 (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001880 PE=4 SV=1)

HSP 1 Score: 1446.8 bits (3744), Expect = 0.0e+00
Identity = 725/732 (99.04%), Postives = 728/732 (99.45%), Query Frame = 0


Query: 1   MGAERKRKVSLFDVVDETSVSAKINKANGGVAALNNGGGNAGNSLINRWTGRQFSQRYYE 60
           MGAERKRKVSLFDVVDETSVSAK+NK NGGVA LNNGGGNAGNSLINRWTGRQFSQRYYE
Sbjct: 1   MGAERKRKVSLFDVVDETSVSAKLNKVNGGVAPLNNGGGNAGNSLINRWTGRQFSQRYYE 60

Query: 61  ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM 120
           ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM
Sbjct: 61  ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM 120

Query: 121 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 180
           M+ACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM
Sbjct: 121 MVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 180

Query: 181 TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 240
           TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG
Sbjct: 181 TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 240

Query: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR 300
           APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR
Sbjct: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR 300

Query: 301 KINKEIANLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET 360
           KINKEI NLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET
Sbjct: 301 KINKEIGNLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET 360

Query: 361 SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 420
           SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT
Sbjct: 361 SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 420

Query: 421 EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480
           EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL
Sbjct: 421 EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480

Query: 481 GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA 540
           GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA
Sbjct: 481 GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA 540

Query: 541 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR 600
           QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR
Sbjct: 541 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR 600

Query: 601 IMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660
           IMSRFNLKLCSTDFNSRDYY NIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC
Sbjct: 601 IMSRFNLKLCSTDFNSRDYYANIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660

Query: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAAHYYDLENFPQCEAKRVLERLYKK 720
           LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIA+HYYDLENFPQCEAKRVLERLYKK
Sbjct: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIASHYYDLENFPQCEAKRVLERLYKK 720

Query: 721 REKDREESRNRK 733
           REKDREESRNRK
Sbjct: 721 REKDREESRNRK 732

[Close]

BLAST of HG10023038 vs. ExPASy TrEMBL
Match: A0A1S3BRH8 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 OS=Cucumis melo OX=3656 GN=LOC103492738 PE=4 SV=1)

HSP 1 Score: 1446.8 bits (3744), Expect = 0.0e+00
Identity = 725/732 (99.04%), Postives = 728/732 (99.45%), Query Frame = 0


Query: 1   MGAERKRKVSLFDVVDETSVSAKINKANGGVAALNNGGGNAGNSLINRWTGRQFSQRYYE 60
           MGAERKRKVSLFDVVDETSVSAK+NK NGGVA LNNGGGNAGNSLINRWTGRQFSQRYYE
Sbjct: 1   MGAERKRKVSLFDVVDETSVSAKLNKVNGGVAPLNNGGGNAGNSLINRWTGRQFSQRYYE 60

Query: 61  ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM 120
           ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM
Sbjct: 61  ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM 120

Query: 121 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 180
           M+ACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM
Sbjct: 121 MVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 180

Query: 181 TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 240
           TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG
Sbjct: 181 TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 240

Query: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR 300
           APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR
Sbjct: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR 300

Query: 301 KINKEIANLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET 360
           KINKEI NLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET
Sbjct: 301 KINKEIGNLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET 360

Query: 361 SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 420
           SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT
Sbjct: 361 SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 420

Query: 421 EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480
           EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL
Sbjct: 421 EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480

Query: 481 GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA 540
           GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA
Sbjct: 481 GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA 540

Query: 541 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR 600
           QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR
Sbjct: 541 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR 600

Query: 601 IMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660
           IMSRFNLKLCSTDFNSRDYY NIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC
Sbjct: 601 IMSRFNLKLCSTDFNSRDYYANIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660

Query: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAAHYYDLENFPQCEAKRVLERLYKK 720
           LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIA+HYYDLENFPQCEAKRVLERLYKK
Sbjct: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIASHYYDLENFPQCEAKRVLERLYKK 720

Query: 721 REKDREESRNRK 733
           REKDREESRNRK
Sbjct: 721 REKDREESRNRK 732

[Close]

BLAST of HG10023038 vs. ExPASy TrEMBL
Match: A0A0A0K843 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G412850 PE=4 SV=1)

HSP 1 Score: 1443.7 bits (3736), Expect = 0.0e+00
Identity = 722/732 (98.63%), Postives = 728/732 (99.45%), Query Frame = 0


Query: 1   MGAERKRKVSLFDVVDETSVSAKINKANGGVAALNNGGGNAGNSLINRWTGRQFSQRYYE 60
           MGAERKRKVSLFDVVDETSVSAK+NK NGGVA LNNGGGNAGNSLINRWTGRQFSQRYYE
Sbjct: 1   MGAERKRKVSLFDVVDETSVSAKLNKVNGGVAPLNNGGGNAGNSLINRWTGRQFSQRYYE 60

Query: 61  ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM 120
           ILEKRKTLPVWHQKEEFFQ LKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM
Sbjct: 61  ILEKRKTLPVWHQKEEFFQVLKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM 120

Query: 121 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 180
           M+ACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM
Sbjct: 121 MVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 180

Query: 181 TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 240
           TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG
Sbjct: 181 TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 240

Query: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR 300
           APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR
Sbjct: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR 300

Query: 301 KINKEIANLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET 360
           KINKEI NLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET
Sbjct: 301 KINKEIGNLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET 360

Query: 361 SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 420
           SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT
Sbjct: 361 SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 420

Query: 421 EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480
           EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL
Sbjct: 421 EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480

Query: 481 GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA 540
           GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILS+SAMLSVPNCFVRPREA
Sbjct: 481 GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSVSAMLSVPNCFVRPREA 540

Query: 541 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR 600
           QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR
Sbjct: 541 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR 600

Query: 601 IMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660
           IMSRFNLKLCSTDFN+R+YYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC
Sbjct: 601 IMSRFNLKLCSTDFNNREYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660

Query: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAAHYYDLENFPQCEAKRVLERLYKK 720
           LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIA+HYYDLENFPQCEAKRVLERLYKK
Sbjct: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIASHYYDLENFPQCEAKRVLERLYKK 720

Query: 721 REKDREESRNRK 733
           REKDREESRNRK
Sbjct: 721 REKDREESRNRK 732

[Close]

BLAST of HG10023038 vs. ExPASy TrEMBL
Match: A0A6J1D104 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016020 PE=4 SV=1)

HSP 1 Score: 1439.1 bits (3724), Expect = 0.0e+00
Identity = 721/732 (98.50%), Postives = 728/732 (99.45%), Query Frame = 0


Query: 1   MGAERKRKVSLFDVVDETSVSAKINKANGGVAALNNGGGNAGNSLINRWTGRQFSQRYYE 60
           MGAERKRKVSLFDVVDETSVSAKINK+NGG AALNNGGGNAGNSLINRWTGR FSQRYYE
Sbjct: 1   MGAERKRKVSLFDVVDETSVSAKINKSNGGGAALNNGGGNAGNSLINRWTGRPFSQRYYE 60

Query: 61  ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM 120
           ILEKR+TLPVWHQKEEFFQALK+SQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM
Sbjct: 61  ILEKRETLPVWHQKEEFFQALKASQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM 120

Query: 121 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 180
           M+ACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM
Sbjct: 121 MVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 180

Query: 181 TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 240
           TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYF+G
Sbjct: 181 TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFFG 240

Query: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR 300
           APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR
Sbjct: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR 300

Query: 301 KINKEIANLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET 360
           KINKEI NLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGP GRKIVVSTNIAET
Sbjct: 301 KINKEIGNLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPPGRKIVVSTNIAET 360

Query: 361 SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 420
           SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT
Sbjct: 361 SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 420

Query: 421 EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480
           EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL
Sbjct: 421 EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480

Query: 481 GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA 540
           GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA
Sbjct: 481 GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA 540

Query: 541 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR 600
           QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR
Sbjct: 541 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR 600

Query: 601 IMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660
           IMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC
Sbjct: 601 IMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660

Query: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAAHYYDLENFPQCEAKRVLERLYKK 720
           LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIA+HYYDL+NFPQCEAKRVLERLYKK
Sbjct: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIASHYYDLDNFPQCEAKRVLERLYKK 720

Query: 721 REKDREESRNRK 733
           REKDREESRNRK
Sbjct: 721 REKDREESRNRK 732

[Close]

BLAST of HG10023038 vs. ExPASy TrEMBL
Match: A0A6J1GNR7 (probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456141 PE=4 SV=1)

HSP 1 Score: 1420.2 bits (3675), Expect = 0.0e+00
Identity = 711/732 (97.13%), Postives = 725/732 (99.04%), Query Frame = 0


Query: 1   MGAERKRKVSLFDVVDETSVSAKINKANGGVAALNNGGGNAGNSLINRWTGRQFSQRYYE 60
           MGAERKRKVSLFDVVD+TSVS KI+K+NGG AALNNGGGNAGNSLINRWTGRQ+SQRY+E
Sbjct: 1   MGAERKRKVSLFDVVDDTSVSPKIHKSNGGGAALNNGGGNAGNSLINRWTGRQYSQRYFE 60

Query: 61  ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM 120
           ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM
Sbjct: 61  ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM 120

Query: 121 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 180
           M+ACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM
Sbjct: 121 MVACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 180

Query: 181 TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 240
           TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYF G
Sbjct: 181 TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFNG 240

Query: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR 300
           APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEP GDILVFLTGEEEIEDACR
Sbjct: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPIGDILVFLTGEEEIEDACR 300

Query: 301 KINKEIANLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET 360
           KINKEI+NLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGP GRKIVVSTNIAET
Sbjct: 301 KINKEISNLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPPGRKIVVSTNIAET 360

Query: 361 SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 420
           SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT
Sbjct: 361 SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 420

Query: 421 EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480
           E+SFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL
Sbjct: 421 ERSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480

Query: 481 GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA 540
           GALDD+GNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA
Sbjct: 481 GALDDEGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA 540

Query: 541 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR 600
           QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMK+ADNVREQLVR
Sbjct: 541 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKSADNVREQLVR 600

Query: 601 IMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660
           IM+RFNLKLCSTDFNSR+YYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC
Sbjct: 601 IMARFNLKLCSTDFNSREYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660

Query: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAAHYYDLENFPQCEAKRVLERLYKK 720
           LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVD+AAHYYDL NFP CEAKRVLE+LYKK
Sbjct: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVAAHYYDLANFPLCEAKRVLEKLYKK 720

Query: 721 REKDREESRNRK 733
           REKDREESRNRK
Sbjct: 721 REKDREESRNRK 732

[Close]

BLAST of HG10023038 vs. TAIR 10
Match: AT3G62310.1 (RNA helicase family protein )

HSP 1 Score: 1298.1 bits (3358), Expect = 0.0e+00
Identity = 643/733 (87.72%), Postives = 691/733 (94.27%), Query Frame = 0


Query: 1   MGAERKRKVSLFDVVDETSVSAKINKANGGVAALNNGGGNAGNSLINRWTGRQFSQRYYE 60
           MG ERKRK+SLFDV+D+ S  AK  K +G    L +GG    NSLIN+W G+ +SQRYY+
Sbjct: 1   MGTERKRKISLFDVMDDPSAPAKNAKTSG----LPDGG---INSLINKWNGKPYSQRYYD 60

Query: 61  ILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKKM 120
           ILEKR+TLPVW QKEEF + L ++QTLILVGETGSGKTTQIPQFV++AVD ++ DKR+K 
Sbjct: 61  ILEKRRTLPVWLQKEEFLKTLNNNQTLILVGETGSGKTTQIPQFVIDAVDAETSDKRRKW 120

Query: 121 MIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 180
           ++ CTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSS RTVLKYLTDGMLLREAM
Sbjct: 121 LVGCTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSPRTVLKYLTDGMLLREAM 180

Query: 181 TDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFYG 240
            DPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQ YF G
Sbjct: 181 ADPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQDYFSG 240

Query: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDACR 300
           APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH+CEPPGDILVFLTGEEEIEDACR
Sbjct: 241 APLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDACR 300

Query: 301 KINKEIANLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAET 360
           KINKE+ NLGDQVGP+KVVPLYSTLPPAMQQKIF+PAP PV E GP GRKIVVSTNIAET
Sbjct: 301 KINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPVTEGGPPGRKIVVSTNIAET 360

Query: 361 SLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLYT 420
           SLTIDGIVYVIDPGF+KQKVYNPR+RVESLLVSPISKASAHQRSGRAGRT+PGKCFRLYT
Sbjct: 361 SLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLYT 420

Query: 421 EKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480
           EKSF NDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL
Sbjct: 421 EKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNYL 480

Query: 481 GALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPREA 540
           GALDDDGNLTK GEIMSEFPLDPQM+KML+VSPEF CSNEILS+SAMLSVPNCF+RPREA
Sbjct: 481 GALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCSNEILSVSAMLSVPNCFIRPREA 540

Query: 541 QKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLVR 600
           QKAADEAKARFGHI+GDHLTLLNVYHA+KQNNED +WCYENFIN+RAMK+ADNVR+QLVR
Sbjct: 541 QKAADEAKARFGHIEGDHLTLLNVYHAFKQNNEDPNWCYENFINNRAMKSADNVRQQLVR 600

Query: 601 IMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660
           IMSRFNLK+CSTDFNSRDYY+NIRKAML+GYFMQVAHLERTGHYLTVKDNQVVHLHPSNC
Sbjct: 601 IMSRFNLKMCSTDFNSRDYYINIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSNC 660

Query: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAAHYYDLENFPQCEAKRVLERLYKK 720
           LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVD+A+HYYDL NFP CEAKRV+E+LYKK
Sbjct: 661 LDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDVASHYYDLSNFPNCEAKRVIEKLYKK 720

Query: 721 REKDREES-RNRK 733
           RE+++EES +NRK
Sbjct: 721 REREKEESKKNRK 726

[Close]

BLAST of HG10023038 vs. TAIR 10
Match: AT2G47250.1 (RNA helicase family protein )

HSP 1 Score: 1293.9 bits (3347), Expect = 0.0e+00
Identity = 639/733 (87.18%), Postives = 691/733 (94.27%), Query Frame = 0


Query: 1   MGAERKRKVSLFDVVDETSVSAKINKANG-GVAALNNGGGNAGNSLINRWTGRQFSQRYY 60
           MG ERKRKVSLFDV+++ S+S+K  K+NG G+AA   GG N    LIN+W G+ +SQRY+
Sbjct: 1   MGTERKRKVSLFDVMEDPSLSSKNTKSNGLGLAAAAGGGSN----LINKWNGKAYSQRYF 60

Query: 61  EILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKK 120
           EILEKR+ LPVW QK++F   L S+QTLILVGETGSGKTTQIPQFVL+AV  D+ DK +K
Sbjct: 61  EILEKRRDLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRK 120

Query: 121 MMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREA 180
            ++ CTQPRRVAAMSVSRRVA+EMDV+IGEEVGYSIRFEDC+S+RT+LKYLTDGMLLREA
Sbjct: 121 WLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREA 180

Query: 181 MTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY 240
           M DPLLERYKVIILDEAHERTLATDVLFGLLKEVL+NRPDLKLVVMSATLEAEKFQ YF 
Sbjct: 181 MADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNRPDLKLVVMSATLEAEKFQEYFS 240

Query: 241 GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDAC 300
           GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIH+CEPPGDILVFLTGEEEIEDAC
Sbjct: 241 GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHMCEPPGDILVFLTGEEEIEDAC 300

Query: 301 RKINKEIANLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAE 360
           RKINKE++NLGDQVGPVKVVPLYSTLPPAMQQKIF+PAP P+ E GPAGRKIVVSTNIAE
Sbjct: 301 RKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPLTEGGPAGRKIVVSTNIAE 360

Query: 361 TSLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLY 420
           TSLTIDGIVYVIDPGF+KQKVYNPR+RVESLLVSPISKASAHQRSGRAGRT+PGKCFRLY
Sbjct: 361 TSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAHQRSGRAGRTRPGKCFRLY 420

Query: 421 TEKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 480
           TEKSF NDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY
Sbjct: 421 TEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 480

Query: 481 LGALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPNCFVRPRE 540
           LGALDD+GNLTK GEIMSEFPLDPQMSKML+VSPEF CSNEILS+SAMLSVPNCFVRPRE
Sbjct: 481 LGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCSNEILSVSAMLSVPNCFVRPRE 540

Query: 541 AQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVREQLV 600
           AQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNED +WC+ENF+N+RAMK+ADNVR+QLV
Sbjct: 541 AQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDPNWCFENFVNNRAMKSADNVRQQLV 600

Query: 601 RIMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLHPSN 660
           RIMSRFNLK+CSTDFNSRDYYVNIRKAML+GYFMQVAHLERTGHYLTVKDNQVVHLHPSN
Sbjct: 601 RIMSRFNLKMCSTDFNSRDYYVNIRKAMLAGYFMQVAHLERTGHYLTVKDNQVVHLHPSN 660

Query: 661 CLDHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAAHYYDLENFPQCEAKRVLERLYK 720
           CLDHKPEWVIYNEYVLT+RNFIRTVTDIRGEWLVD+A HYYDL NFP CEAKR LE+LYK
Sbjct: 661 CLDHKPEWVIYNEYVLTTRNFIRTVTDIRGEWLVDVAQHYYDLSNFPNCEAKRALEKLYK 720

Query: 721 KREKDREESRNRK 733
           KRE+++ ES+NRK
Sbjct: 721 KREREKNESKNRK 729

[Close]

BLAST of HG10023038 vs. TAIR 10
Match: AT1G32490.1 (RNA helicase family protein )

HSP 1 Score: 689.5 bits (1778), Expect = 2.9e-198
Identity = 346/658 (52.58%), Postives = 480/658 (72.95%), Query Frame = 0


Query: 60   EILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKK 119
            E+ E R++LP++  +++  +A++  Q L++VG+TGSGKTTQIPQ++ EA         K+
Sbjct: 396  ELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEA------GYTKR 455

Query: 120  MMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREA 179
              + CTQPRRVAAMSV+ RVA+EM V +G EVGYSIRFEDC+S +TVLKY+TDGMLLRE 
Sbjct: 456  GKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREL 515

Query: 180  MTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY 239
            + +P L  Y V+I+DEAHERTL+TD+LFGL+K++ + RPDLKL++ SAT++AEKF  YF 
Sbjct: 516  LGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFD 575

Query: 240  GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDAC 299
             AP+   PGR +PVEI YT  PE DY++AAI T++ IH+ EP GDILVF TG+EEIE A 
Sbjct: 576  TAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAE 635

Query: 300  RKINKEIANLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAE 359
              +   I  LG ++  + + P+Y+ LP  +Q KIFEP P          RK+V++TNIAE
Sbjct: 636  EILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTP-------EGARKVVLATNIAE 695

Query: 360  TSLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLY 419
            TSLTIDGI YV+DPGFSK K YNPR  +ESLL++PISKASA QR+GRAGRT PGKC+RLY
Sbjct: 696  TSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLY 755

Query: 420  TEKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 479
            T  ++ NDL+  T PE+ R+NLA+ VL LK LGI DL++FDFMDPP  E L+++LE+L  
Sbjct: 756  TAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFA 815

Query: 480  LGALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSV-PNCFVRPR 539
            LGAL+  G LTK G  M+EFPLDP +SKM+VVS ++KCS+EI+SI+AMLS+  + F RP+
Sbjct: 816  LGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPK 875

Query: 540  EAQKAADEAKARF--GHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVRE 599
            + Q  AD A+  F  G++ GDH+ LL VY ++K+ N    WCYEN+I  R+MK A ++R+
Sbjct: 876  DKQVHADNARMNFHTGNV-GDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRD 935

Query: 600  QLVRIMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLH 659
            QL  ++ R  + + S++ N  D   ++RK++++G+F   A L++ G Y TVK  Q VH+H
Sbjct: 936  QLEGLLERVEIDI-SSNLNELD---SVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIH 995

Query: 660  PSNCLDH-KPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAAHYYDLENFPQCEAKRV 714
            P++ L    P WV+Y+E VLTS+ ++R VT+++ EWL+++A HYY L++     +K++
Sbjct: 996  PNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKKM 1035

[Close]

BLAST of HG10023038 vs. TAIR 10
Match: AT1G32490.2 (RNA helicase family protein )

HSP 1 Score: 689.5 bits (1778), Expect = 2.9e-198
Identity = 346/658 (52.58%), Postives = 480/658 (72.95%), Query Frame = 0


Query: 60   EILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLDSPDKRKK 119
            E+ E R++LP++  +++  +A++  Q L++VG+TGSGKTTQIPQ++ EA         K+
Sbjct: 386  ELQEVRRSLPIYTYRDQLLKAVEEHQVLVIVGDTGSGKTTQIPQYLHEA------GYTKR 445

Query: 120  MMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREA 179
              + CTQPRRVAAMSV+ RVA+EM V +G EVGYSIRFEDC+S +TVLKY+TDGMLLRE 
Sbjct: 446  GKVGCTQPRRVAAMSVAARVAQEMGVKLGHEVGYSIRFEDCTSDKTVLKYMTDGMLLREL 505

Query: 180  MTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAEKFQGYFY 239
            + +P L  Y V+I+DEAHERTL+TD+LFGL+K++ + RPDLKL++ SAT++AEKF  YF 
Sbjct: 506  LGEPDLASYSVVIVDEAHERTLSTDILFGLVKDIARFRPDLKLLISSATMDAEKFSDYFD 565

Query: 240  GAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGEEEIEDAC 299
             AP+   PGR +PVEI YT  PE DY++AAI T++ IH+ EP GDILVF TG+EEIE A 
Sbjct: 566  TAPIFSFPGRRYPVEINYTSAPEADYMDAAIVTILTIHVREPLGDILVFFTGQEEIETAE 625

Query: 300  RKINKEIANLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIVVSTNIAE 359
              +   I  LG ++  + + P+Y+ LP  +Q KIFEP P          RK+V++TNIAE
Sbjct: 626  EILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTP-------EGARKVVLATNIAE 685

Query: 360  TSLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQPGKCFRLY 419
            TSLTIDGI YV+DPGFSK K YNPR  +ESLL++PISKASA QR+GRAGRT PGKC+RLY
Sbjct: 686  TSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGRTSPGKCYRLY 745

Query: 420  TEKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMRALEVLNY 479
            T  ++ NDL+  T PE+ R+NLA+ VL LK LGI DL++FDFMDPP  E L+++LE+L  
Sbjct: 746  TAFNYNNDLEENTVPEVQRTNLASVVLALKSLGIHDLINFDFMDPPPAEALVKSLELLFA 805

Query: 480  LGALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSV-PNCFVRPR 539
            LGAL+  G LTK G  M+EFPLDP +SKM+VVS ++KCS+EI+SI+AMLS+  + F RP+
Sbjct: 806  LGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPK 865

Query: 540  EAQKAADEAKARF--GHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAADNVRE 599
            + Q  AD A+  F  G++ GDH+ LL VY ++K+ N    WCYEN+I  R+MK A ++R+
Sbjct: 866  DKQVHADNARMNFHTGNV-GDHIALLKVYSSWKETNFSTQWCYENYIQVRSMKRARDIRD 925

Query: 600  QLVRIMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQVVHLH 659
            QL  ++ R  + + S++ N  D   ++RK++++G+F   A L++ G Y TVK  Q VH+H
Sbjct: 926  QLEGLLERVEIDI-SSNLNELD---SVRKSIVAGFFPHTAKLQKNGSYRTVKHPQTVHIH 985

Query: 660  PSNCLDH-KPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAAHYYDLENFPQCEAKRV 714
            P++ L    P WV+Y+E VLTS+ ++R VT+++ EWL+++A HYY L++     +K++
Sbjct: 986  PNSGLSQVLPRWVVYHELVLTSKEYMRQVTELKPEWLIELAPHYYQLKDVEDAASKKM 1025

[Close]

BLAST of HG10023038 vs. TAIR 10
Match: AT3G26560.1 (ATP-dependent RNA helicase, putative )

HSP 1 Score: 687.6 bits (1773), Expect = 1.1e-197
Identity = 347/666 (52.10%), Postives = 480/666 (72.07%), Query Frame = 0


Query: 54   FSQR-YYEILEKRKTLPVWHQKEEFFQALKSSQTLILVGETGSGKTTQIPQFVLEAVDLD 113
            F QR    I E+R++LP++  K+E  QA+  +Q L+++GETGSGKTTQ+ Q++ EA    
Sbjct: 500  FGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEA---- 559

Query: 114  SPDKRKKMMIACTQPRRVAAMSVSRRVAEEMDVTIGEEVGYSIRFEDCSSARTVLKYLTD 173
                  K  I CTQPRRVAAMSV++RVAEE    +GEEVGY+IRFEDC+   TV+KY+TD
Sbjct: 560  --GYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTD 619

Query: 174  GMLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATLEAE 233
            GMLLRE + D  L +Y VI+LDEAHERT+ TDVLFGLLK+++K R DL+L+V SATL+AE
Sbjct: 620  GMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRLDLRLIVTSATLDAE 679

Query: 234  KFQGYFYGAPLMKVPGRLHPVEIFYTQEPERDYLEAAIRTVVQIHLCEPPGDILVFLTGE 293
            KF GYF+   +  +PGR  PVEI YT++PE DYL+AA+ TV+QIHL EP GDILVFLTG+
Sbjct: 680  KFSGYFFNCNIFTIPGRTFPVEILYTKQPETDYLDAALITVLQIHLTEPEGDILVFLTGQ 739

Query: 294  EEIEDACRKINKEIANLGDQVGPVKVVPLYSTLPPAMQQKIFEPAPPPVKEDGPAGRKIV 353
            EEI+ AC+ + + +  LG  V  + ++P+YS LP  MQ +IF+P PPP K      RK+V
Sbjct: 740  EEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDP-PPPGK------RKVV 799

Query: 354  VSTNIAETSLTIDGIVYVIDPGFSKQKVYNPRVRVESLLVSPISKASAHQRSGRAGRTQP 413
            V+TNIAE SLTIDGI YV+DPGF+KQ VYNP+  +ESL+++PIS+ASA QR+GRAGRT P
Sbjct: 800  VATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGP 859

Query: 414  GKCFRLYTEKSFQNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFDFMDPPAPETLMR 473
            GKC+RLYTE +++N++ P + PEI R NL  T LT+K +GI+DL+ FDFMDPP P+ L+ 
Sbjct: 860  GKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSFDFMDPPQPQALIS 919

Query: 474  ALEVLNYLGALDDDGNLTKLGEIMSEFPLDPQMSKMLVVSPEFKCSNEILSISAMLSVPN 533
            A+E L  LGALD++G LTKLG  M+EFPL+P +SKML+ S +  CS+EIL++ AM+   N
Sbjct: 920  AMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQTGN 979

Query: 534  CFVRPREAQKAADEAKARFGHIDGDHLTLLNVYHAYKQNNEDQSWCYENFINHRAMKAAD 593
             F RPRE Q  AD+ +A+F   +GDHLTLL VY A+K  N    WC+ENFI  R+++ A 
Sbjct: 980  IFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFIQSRSLRRAQ 1039

Query: 594  NVREQLVRIMSRFNLKLCSTDFNSRDYYVNIRKAMLSGYFMQVAHLERTGHYLTVKDNQV 653
            +VR+QL+ IM ++ L + +   N    +  IRKA+ +G+F   A  +    Y T+ +NQ 
Sbjct: 1040 DVRKQLLSIMDKYKLDVVTAGKN----FTKIRKAITAGFFFHGARKDPQEGYRTLVENQP 1099

Query: 654  VHLHPSNCL-DHKPEWVIYNEYVLTSRNFIRTVTDIRGEWLVDIAAHYYDLENFPQCEAK 713
            V++HPS+ L   +P+WVIY++ V+T++ ++R VT I  +WLV++A  ++ + +  +   +
Sbjct: 1100 VYIHPSSALFQRQPDWVIYHDLVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKR 1148

Query: 714  RVLERL 718
            +  ER+
Sbjct: 1160 KRQERI 1148

The following BLAST results are available for this feature:

BLAST of HG10023038 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899479.1	0.0e+00	99.73	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1 [B...	[more]
XP_008451444.1	0.0e+00	99.04	PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 [C...	[more]
XP_004135980.1	0.0e+00	98.63	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 [Cucumis sati...	[more]
XP_022146947.1	0.0e+00	98.50	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1 [M...	[more]
XP_022953686.1	0.0e+00	97.13	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1 [C...	[more]

BLAST of HG10023038 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LZQ9	0.0e+00	87.72	Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 OS=Arabidopsi...	[more]
O22899	0.0e+00	87.18	Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 OS=Arabidopsi...	[more]
O35286	1.4e-290	71.49	Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Mus musculus OX=100...	[more]
O43143	3.2e-290	70.22	Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Homo sapiens OX=960...	[more]
Q5RAZ4	5.4e-290	69.66	Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 OS=Pongo abelii OX=960...	[more]

BLAST of HG10023038 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TZE6	0.0e+00	99.04	Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 OS=Cucumis me...	[more]
A0A1S3BRH8	0.0e+00	99.04	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 OS=Cucumis me...	[more]
A0A0A0K843	0.0e+00	98.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G412850 PE=4 SV=1	[more]
A0A6J1D104	0.0e+00	98.50	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1 OS...	[more]
A0A6J1GNR7	0.0e+00	97.13	probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 isoform X1 OS...	[more]

BLAST of HG10023038 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62310.1	0.0e+00	87.72	RNA helicase family protein	[more]
AT2G47250.1	0.0e+00	87.18	RNA helicase family protein	[more]
AT1G32490.1	2.9e-198	52.58	RNA helicase family protein	[more]
AT1G32490.2	2.9e-198	52.58	RNA helicase family protein	[more]
AT3G26560.1	1.1e-197	52.10	ATP-dependent RNA helicase, putative	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 711..731
None	No IPR available	COILS	Coil	Coil	coord: 292..312
None	No IPR available	GENE3D	1.20.120.1080		coord: 456..565 e-value: 7.0E-34 score: 118.0
None	No IPR available	PANTHER	PTHR18934:SF217	PRE-MRNA-SPLICING FACTOR ATP-DEPENDENT RNA HELICASE DEAH3-RELATED	coord: 1..732
None	No IPR available	PANTHER	PTHR18934	ATP-DEPENDENT RNA HELICASE	coord: 1..732
None	No IPR available	CDD	cd18791	SF2_C_RHA	coord: 251..419 e-value: 1.41321E-85 score: 265.551
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 293..411 e-value: 3.2E-17 score: 73.2
IPR001650	Helicase, C-terminal	PFAM	PF00271	Helicase_C	coord: 274..410 e-value: 1.1E-10 score: 41.8
IPR001650	Helicase, C-terminal	PROSITE	PS51194	HELICASE_CTER	coord: 272..452 score: 16.768036
IPR007502	Helicase-associated domain	SMART	SM00847	ha2_5	coord: 472..562 e-value: 1.6E-35 score: 134.0
IPR007502	Helicase-associated domain	PFAM	PF04408	HA2	coord: 473..561 e-value: 4.4E-24 score: 84.9
IPR014001	Helicase superfamily 1/2, ATP-binding domain	SMART	SM00487	ultradead3	coord: 65..256 e-value: 3.1E-33 score: 126.4
IPR014001	Helicase superfamily 1/2, ATP-binding domain	PROSITE	PS51192	HELICASE_ATP_BIND_1	coord: 78..247 score: 21.229099
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 250..432 e-value: 1.3E-75 score: 255.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 30..249 e-value: 1.9E-90 score: 304.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 55..613
IPR011709	Domain of unknown function DUF1605	PFAM	PF07717	OB_NTP_bind	coord: 623..698 e-value: 1.0E-18 score: 67.4
IPR011545	DEAD/DEAH box helicase domain	PFAM	PF00270	DEAD	coord: 76..232 e-value: 1.9E-7 score: 31.0
IPR044756	DHX15, DEXH-box helicase domain	CDD	cd17973	DEXHc_DHX15	coord: 56..246 e-value: 4.03443E-123 score: 363.577

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10023038.1	HG10023038.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008380	RNA splicing
cellular_component	GO:0005681	spliceosomal complex
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003724	RNA helicase activity
molecular_function	GO:0004386	helicase activity
molecular_function	GO:0003676	nucleic acid binding