HG10022994 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10022994
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Unknown protein
Location	Chr05: 30310205 .. 30310354 (-)
RNA-Seq Expression	HG10022994
Synteny	HG10022994

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGGAGGAAAAACAGACCTTTAAAGAGTCTGATGATGGTGGACGCCAGGCTGGCCTAGAAGGCCCTATACCGTACGATCTGCCTCCACGTGGGACCCCTCCACCACTCCTAATTATCATACGCCGTGCTGAGCTGTACTTCCTCTAG

mRNA sequence

ATGCAGGAGGAAAAACAGACCTTTAAAGAGTCTGATGATGGTGGACGCCAGGCTGGCCTAGAAGGCCCTATACCGTACGATCTGCCTCCACGTGGGACCCCTCCACCACTCCTAATTATCATACGCCGTGCTGAGCTGTACTTCCTCTAG

Coding sequence (CDS)

ATGCAGGAGGAAAAACAGACCTTTAAAGAGTCTGATGATGGTGGACGCCAGGCTGGCCTAGAAGGCCCTATACCGTACGATCTGCCTCCACGTGGGACCCCTCCACCACTCCTAATTATCATACGCCGTGCTGAGCTGTACTTCCTCTAG

Protein sequence

MQEEKQTFKESDDGGRQAGLEGPIPYDLPPRGTPPPLLIIIRRAELYFL

Homology

The following BLAST results are available for this feature:

BLAST of HG10022994 vs.


Match Name	E-value	Identity	Description

BLAST of HG10022994 vs.


Match Name	E-value	Identity	Description

BLAST of HG10022994 vs.


Match Name	E-value	Identity	Description

BLAST of HG10022994 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10022994.1	HG10022994.1	mRNA