HG10022945 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10022945
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	rapid alkalinization factor-like
Location	Chr05: 29846705 .. 29847061 (+)
RNA-Seq Expression	HG10022945
Synteny	HG10022945

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCCCAAGGTTTCTTCTCCCCTGCTATTTTTCTTTATCGCTACAATCCTGACGGTCTCCTCCACCGCGGTATTGACCACCAGCACCAAGACCCCGAGCTGGGTCCTGGATGGAGCTCGAGCTCACTGTCATGGCTCCATGGCAGAGTGCATGATGGATGATATTGAATTTGAGATGAACTCCGATATCAATAGACGCATATTGGCAGATTTAAACTACATAAGCTATGACGCACTCAAGGCCAACACGGTGCCATGCTCACGCAGAGGAGCATCTTACTACAATTGCCAGCCAGGTGCCGAGGCAAACCCCTACAACCGTGGCTGCAATGCTATTTCTCGTTGCCGAAGCTAA

mRNA sequence

ATGGCGCCCAAGGTTTCTTCTCCCCTGCTATTTTTCTTTATCGCTACAATCCTGACGGTCTCCTCCACCGCGGTATTGACCACCAGCACCAAGACCCCGAGCTGGGTCCTGGATGGAGCTCGAGCTCACTGTCATGGCTCCATGGCAGAGTGCATGATGGATGATATTGAATTTGAGATGAACTCCGATATCAATAGACGCATATTGGCAGATTTAAACTACATAAGCTATGACGCACTCAAGGCCAACACGGTGCCATGCTCACGCAGAGGAGCATCTTACTACAATTGCCAGCCAGGTGCCGAGGCAAACCCCTACAACCGTGGCTGCAATGCTATTTCTCGTTGCCGAAGCTAA

Coding sequence (CDS)

ATGGCGCCCAAGGTTTCTTCTCCCCTGCTATTTTTCTTTATCGCTACAATCCTGACGGTCTCCTCCACCGCGGTATTGACCACCAGCACCAAGACCCCGAGCTGGGTCCTGGATGGAGCTCGAGCTCACTGTCATGGCTCCATGGCAGAGTGCATGATGGATGATATTGAATTTGAGATGAACTCCGATATCAATAGACGCATATTGGCAGATTTAAACTACATAAGCTATGACGCACTCAAGGCCAACACGGTGCCATGCTCACGCAGAGGAGCATCTTACTACAATTGCCAGCCAGGTGCCGAGGCAAACCCCTACAACCGTGGCTGCAATGCTATTTCTCGTTGCCGAAGCTAA

Protein sequence

MAPKVSSPLLFFFIATILTVSSTAVLTTSTKTPSWVLDGARAHCHGSMAECMMDDIEFEMNSDINRRILADLNYISYDALKANTVPCSRRGASYYNCQPGAEANPYNRGCNAISRCRS

Homology

[Close]

BLAST of HG10022945 vs. NCBI nr
Match: XP_038896330.1 (protein RALF-like 33 [Benincasa hispida])

HSP 1 Score: 215.3 bits (547), Expect = 2.8e-52
Identity = 108/118 (91.53%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 1   MAPKVSSPLLFFFIATILTVSSTAVLTTSTKTPSWVLDGARAHCHGSMAECMMDDIEFEM 60
           MA KVS  L FF +A ILTVSSTAVLTTSTKTPSWVLDGARA CHGSMAECMM DIEFEM
Sbjct: 1   MAAKVSFLLPFFLVAAILTVSSTAVLTTSTKTPSWVLDGARARCHGSMAECMMGDIEFEM 60

Query: 61  NSDINRRILADLNYISYDALKANTVPCSRRGASYYNCQPGAEANPYNRGCNAISRCRS 119
           NSDINRRILADLNYISYDALKANTVPCSRRGASYYNCQPGAEANPY+RGCNAISRCRS
Sbjct: 61  NSDINRRILADLNYISYDALKANTVPCSRRGASYYNCQPGAEANPYDRGCNAISRCRS 118

[Close]

BLAST of HG10022945 vs. NCBI nr
Match: XP_022153599.1 (protein RALF-like 33 [Momordica charantia])

HSP 1 Score: 191.0 bits (484), Expect = 5.7e-45
Identity = 95/118 (80.51%), Postives = 104/118 (88.14%), Query Frame = 0


Query: 1   MAPKVSSPLLFFFIATILTVSSTAVLTTSTKTPSWVLDGARAHCHGSMAECMMDDIEFEM 60
           MA KVS  L F  I  ILTVSSTAV   ST++PSWVLDGARA CHGSMAECMMD+IE+EM
Sbjct: 1   MAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEM 60

Query: 61  NSDINRRILADLNYISYDALKANTVPCSRRGASYYNCQPGAEANPYNRGCNAISRCRS 119
           NS+INRRILA  NYISY+ALKANTVPCSRRGASYYNCQPGAEANPY+RGC+AI+RCRS
Sbjct: 61  NSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 118

[Close]

BLAST of HG10022945 vs. NCBI nr
Match: KAG7014377.1 (Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 185.3 bits (469), Expect = 3.1e-43
Identity = 92/118 (77.97%), Postives = 103/118 (87.29%), Query Frame = 0


Query: 1   MAPKVSSPLLFFFIATILTVSSTAVLTTSTKTPSWVLDGARAHCHGSMAECMMDDIEFEM 60
           MA K+S  L F FIA  LTV ST VL T+TK PSWVLD A A CHGSMA+CMMDDIEF+M
Sbjct: 1   MAAKLSFLLPFCFIAAFLTVFSTVVLATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60

Query: 61  NSDINRRILADLNYISYDALKANTVPCSRRGASYYNCQPGAEANPYNRGCNAISRCRS 119
           +S+INRRILAD+NYISYDAL+AN VPCSRRGASYYNCQPGAEANPY+RGC+AI+RCRS
Sbjct: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 118

[Close]

BLAST of HG10022945 vs. NCBI nr
Match: XP_011659776.1 (rapid alkalinization factor [Cucumis sativus])

HSP 1 Score: 184.9 bits (468), Expect = 4.1e-43
Identity = 93/118 (78.81%), Postives = 101/118 (85.59%), Query Frame = 0


Query: 1   MAPKVSSPLLFFFIATILTVSSTAVLTTSTKTPSWVLDGARAHCHGSMAECMMDDIEFEM 60
           MA  VS  L  F +  ILTVSSTA      KTPSWVLDGA A CHGSMAECMM+DIEF+M
Sbjct: 1   MATTVSFLLPIFLLVAILTVSSTA------KTPSWVLDGAHARCHGSMAECMMEDIEFQM 60

Query: 61  NSDINRRILADLNYISYDALKANTVPCSRRGASYYNCQPGAEANPYNRGCNAISRCRS 119
           +S+INRRILADLNYISYDALKAN+VPCSR+GASYYNCQPGAEANPY+RGCNAISRCRS
Sbjct: 61  DSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]

BLAST of HG10022945 vs. NCBI nr
Match: XP_022953165.1 (rapid alkalinization factor-like [Cucurbita moschata])

HSP 1 Score: 184.5 bits (467), Expect = 5.3e-43
Identity = 92/118 (77.97%), Postives = 103/118 (87.29%), Query Frame = 0


Query: 1   MAPKVSSPLLFFFIATILTVSSTAVLTTSTKTPSWVLDGARAHCHGSMAECMMDDIEFEM 60
           MA K+S  L F FIA  LTV STAV  T+TK PSWVLD A A CHGSMA+CMMDDIEF+M
Sbjct: 1   MAAKLSFLLPFCFIAAFLTVFSTAVSATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60

Query: 61  NSDINRRILADLNYISYDALKANTVPCSRRGASYYNCQPGAEANPYNRGCNAISRCRS 119
           +S+INRRILAD+NYISYDAL+AN VPCSRRGASYYNCQPGAEANPY+RGC+AI+RCRS
Sbjct: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 118

[Close]

BLAST of HG10022945 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.8e-25
Identity = 53/85 (62.35%), Postives = 69/85 (81.18%), Query Frame = 0


Query: 35  WVLDG-ARAHCHGSMAECMMDDIEFEMNSDINRRILADLNYISYDALKANTVPCSRRGAS 94
           WV+   +   C GS+ EC+ ++ EFE++S+ NRRILA   YISY AL+ N+VPCSRRGAS
Sbjct: 31  WVMPARSGGGCKGSIGECIAEEEEFELDSESNRRILATKKYISYGALQKNSVPCSRRGAS 90

Query: 95  YYNCQPGAEANPYNRGCNAISRCRS 119
           YYNC+PGA+ANPY+RGC+AI+RCRS
Sbjct: 91  YYNCKPGAQANPYSRGCSAITRCRS 115

[Close]

BLAST of HG10022945 vs. ExPASy Swiss-Prot
Match: Q9SRY3 (Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.0e-24
Identity = 55/86 (63.95%), Postives = 68/86 (79.07%), Query Frame = 0


Query: 34  SWVLDGAR-AHCHGSMAECMMDDIEFEMNSDINRRILADLNYISYDALKANTVPCSRRGA 93
           +W   G   + CHGS+AEC+  + E EM+S+INRRILA   YISY +LK N+VPCSRRGA
Sbjct: 36  AWATTGDNGSGCHGSIAECIGAE-EEEMDSEINRRILATTKYISYQSLKRNSVPCSRRGA 95

Query: 94  SYYNCQPGAEANPYNRGCNAISRCRS 119
           SYYNCQ GA+ANPY+RGC+ I+RCRS
Sbjct: 96  SYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of HG10022945 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.0e-24
Identity = 60/106 (56.60%), Postives = 76/106 (71.70%), Query Frame = 0


Query: 14  IATILTVSSTAVLTTSTKTPSWVLDGARAHCHGSMAECMMD--DIEFEMNSDINRRILAD 73
           I  ILTV       TS  +  +V     + C+G++AEC +   + EFEM+S+INRRILA 
Sbjct: 12  IIAILTVHFLFAAVTSQSSGDFV--PIESKCNGTIAECSLSTAEEEFEMDSEINRRILAT 71

Query: 74  LNYISYDALKANTVPCSRRGASYYNCQPGAEANPYNRGCNAISRCR 118
             YISY AL+ NTVPCSRRGASYYNC+ GA+ANPY+RGC+AI+RCR
Sbjct: 72  TKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of HG10022945 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 4.8e-23
Identity = 59/113 (52.21%), Postives = 77/113 (68.14%), Query Frame = 0


Query: 12  FFIATILTVSSTAVLTTSTKTPSWVLDGARA-------HCHGSMAECMMDDIEFEMNSDI 71
           + +  IL +  +AV +T     S  LD  RA        C GS+AEC+ ++ E E +SDI
Sbjct: 8   YAVIAILAIVISAVESTGDFGDS--LDFVRAGSSSLFSGCTGSIAECIAEEEEMEFDSDI 67

Query: 72  NRRILADLNYISYDALKANTVPCSRRGASYYNCQPGAEANPYNRGCNAISRCR 118
           +RRILA   YISY A++ N+VPCSRRGASYYNCQ GA+ANPY+RGC+ I+RCR
Sbjct: 68  SRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 118

[Close]

BLAST of HG10022945 vs. ExPASy Swiss-Prot
Match: Q9LUS7 (Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.2e-21
Identity = 61/129 (47.29%), Postives = 78/129 (60.47%), Query Frame = 0


Query: 6   SSPLLFFFIATILTVSSTAVLTTSTKTP-SWVLDGARAHCHGSMAECMMD-------DI- 65
           S     F I  IL V + +V  +S  T  +         C G++AEC +        D+ 
Sbjct: 8   SGAAAIFAILLILAVHNWSVAVSSQSTEFAGDFPPFETECRGTIAECSVSAALGDGGDLF 67

Query: 66  --------EFEMNSDINRRILADLNYISYDALKANTVPCSRRGASYYNCQPGAEANPYNR 118
                   EFEM+S+INRRILA   YISY AL+ NT+PCSRRGASYYNC+ GA+ANPY+R
Sbjct: 68  YGGGEMGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSR 127

[Close]

BLAST of HG10022945 vs. ExPASy TrEMBL
Match: A0A6J1DJJ4 (protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111021064 PE=3 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.7e-45
Identity = 95/118 (80.51%), Postives = 104/118 (88.14%), Query Frame = 0


Query: 1   MAPKVSSPLLFFFIATILTVSSTAVLTTSTKTPSWVLDGARAHCHGSMAECMMDDIEFEM 60
           MA KVS  L F  I  ILTVSSTAV   ST++PSWVLDGARA CHGSMAECMMD+IE+EM
Sbjct: 1   MAAKVSFLLPFCLITAILTVSSTAVFAPSTESPSWVLDGARARCHGSMAECMMDEIEYEM 60

Query: 61  NSDINRRILADLNYISYDALKANTVPCSRRGASYYNCQPGAEANPYNRGCNAISRCRS 119
           NS+INRRILA  NYISY+ALKANTVPCSRRGASYYNCQPGAEANPY+RGC+AI+RCRS
Sbjct: 61  NSEINRRILATSNYISYEALKANTVPCSRRGASYYNCQPGAEANPYDRGCSAITRCRS 118

[Close]

BLAST of HG10022945 vs. ExPASy TrEMBL
Match: A0A0A0K607 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396340 PE=3 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 2.0e-43
Identity = 93/118 (78.81%), Postives = 101/118 (85.59%), Query Frame = 0


Query: 1   MAPKVSSPLLFFFIATILTVSSTAVLTTSTKTPSWVLDGARAHCHGSMAECMMDDIEFEM 60
           MA  VS  L  F +  ILTVSSTA      KTPSWVLDGA A CHGSMAECMM+DIEF+M
Sbjct: 1   MATTVSFLLPIFLLVAILTVSSTA------KTPSWVLDGAHARCHGSMAECMMEDIEFQM 60

Query: 61  NSDINRRILADLNYISYDALKANTVPCSRRGASYYNCQPGAEANPYNRGCNAISRCRS 119
           +S+INRRILADLNYISYDALKAN+VPCSR+GASYYNCQPGAEANPY+RGCNAISRCRS
Sbjct: 61  DSEINRRILADLNYISYDALKANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]

BLAST of HG10022945 vs. ExPASy TrEMBL
Match: A0A6J1GNW5 (rapid alkalinization factor-like OS=Cucurbita moschata OX=3662 GN=LOC111455786 PE=3 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.6e-43
Identity = 92/118 (77.97%), Postives = 103/118 (87.29%), Query Frame = 0


Query: 1   MAPKVSSPLLFFFIATILTVSSTAVLTTSTKTPSWVLDGARAHCHGSMAECMMDDIEFEM 60
           MA K+S  L F FIA  LTV STAV  T+TK PSWVLD A A CHGSMA+CMMDDIEF+M
Sbjct: 1   MAAKLSFLLPFCFIAAFLTVFSTAVSATTTKGPSWVLDRALATCHGSMADCMMDDIEFQM 60

Query: 61  NSDINRRILADLNYISYDALKANTVPCSRRGASYYNCQPGAEANPYNRGCNAISRCRS 119
           +S+INRRILAD+NYISYDAL+AN VPCSRRGASYYNCQPGAEANPY+RGC+AI+RCRS
Sbjct: 61  DSEINRRILADVNYISYDALRANKVPCSRRGASYYNCQPGAEANPYDRGCSAIARCRS 118

[Close]

BLAST of HG10022945 vs. ExPASy TrEMBL
Match: A0A5A7VLB3 (Rapid alkalinization factor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00450 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 6.3e-42
Identity = 91/118 (77.12%), Postives = 99/118 (83.90%), Query Frame = 0


Query: 1   MAPKVSSPLLFFFIATILTVSSTAVLTTSTKTPSWVLDGARAHCHGSMAECMMDDIEFEM 60
           MA KVS  L  F +  ILTVSSTA       TPSWVL GA A CHGSMAECM +DIEFEM
Sbjct: 1   MAAKVSFLLPIFLLVAILTVSSTAT------TPSWVLGGAHARCHGSMAECMKEDIEFEM 60

Query: 61  NSDINRRILADLNYISYDALKANTVPCSRRGASYYNCQPGAEANPYNRGCNAISRCRS 119
           +S+INRRILADLNYISYDAL+AN+VPCSR+GASYYNCQPGAEANPY+RGCNAISRCRS
Sbjct: 61  DSEINRRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]

BLAST of HG10022945 vs. ExPASy TrEMBL
Match: A0A1S3BRF1 (rapid alkalinization factor-like OS=Cucumis melo OX=3656 GN=LOC103492893 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 6.3e-42
Identity = 91/118 (77.12%), Postives = 99/118 (83.90%), Query Frame = 0


Query: 1   MAPKVSSPLLFFFIATILTVSSTAVLTTSTKTPSWVLDGARAHCHGSMAECMMDDIEFEM 60
           MA KVS  L  F +  ILTVSSTA       TPSWVL GA A CHGSMAECM +DIEFEM
Sbjct: 1   MAAKVSFLLPIFLLVAILTVSSTAT------TPSWVLGGAHARCHGSMAECMKEDIEFEM 60

Query: 61  NSDINRRILADLNYISYDALKANTVPCSRRGASYYNCQPGAEANPYNRGCNAISRCRS 119
           +S+INRRILADLNYISYDAL+AN+VPCSR+GASYYNCQPGAEANPY+RGCNAISRCRS
Sbjct: 61  DSEINRRILADLNYISYDALRANSVPCSRKGASYYNCQPGAEANPYDRGCNAISRCRS 112

[Close]

BLAST of HG10022945 vs. TAIR 10
Match: AT1G02900.1 (rapid alkalinization factor 1 )

HSP 1 Score: 113.2 bits (282), Expect = 1.4e-25
Identity = 55/86 (63.95%), Postives = 68/86 (79.07%), Query Frame = 0


Query: 34  SWVLDGAR-AHCHGSMAECMMDDIEFEMNSDINRRILADLNYISYDALKANTVPCSRRGA 93
           +W   G   + CHGS+AEC+  + E EM+S+INRRILA   YISY +LK N+VPCSRRGA
Sbjct: 36  AWATTGDNGSGCHGSIAECIGAE-EEEMDSEINRRILATTKYISYQSLKRNSVPCSRRGA 95

Query: 94  SYYNCQPGAEANPYNRGCNAISRCRS 119
           SYYNCQ GA+ANPY+RGC+ I+RCRS
Sbjct: 96  SYYNCQNGAQANPYSRGCSKIARCRS 120

[Close]

BLAST of HG10022945 vs. TAIR 10
Match: AT4G15800.1 (ralf-like 33 )

HSP 1 Score: 113.2 bits (282), Expect = 1.4e-25
Identity = 60/106 (56.60%), Postives = 76/106 (71.70%), Query Frame = 0


Query: 14  IATILTVSSTAVLTTSTKTPSWVLDGARAHCHGSMAECMMD--DIEFEMNSDINRRILAD 73
           I  ILTV       TS  +  +V     + C+G++AEC +   + EFEM+S+INRRILA 
Sbjct: 12  IIAILTVHFLFAAVTSQSSGDFV--PIESKCNGTIAECSLSTAEEEFEMDSEINRRILAT 71

Query: 74  LNYISYDALKANTVPCSRRGASYYNCQPGAEANPYNRGCNAISRCR 118
             YISY AL+ NTVPCSRRGASYYNC+ GA+ANPY+RGC+AI+RCR
Sbjct: 72  TKYISYGALRRNTVPCSRRGASYYNCRRGAQANPYSRGCSAITRCR 115

[Close]

BLAST of HG10022945 vs. TAIR 10
Match: AT3G05490.1 (ralf-like 22 )

HSP 1 Score: 108.6 bits (270), Expect = 3.4e-24
Identity = 59/113 (52.21%), Postives = 77/113 (68.14%), Query Frame = 0


Query: 12  FFIATILTVSSTAVLTTSTKTPSWVLDGARA-------HCHGSMAECMMDDIEFEMNSDI 71
           + +  IL +  +AV +T     S  LD  RA        C GS+AEC+ ++ E E +SDI
Sbjct: 8   YAVIAILAIVISAVESTGDFGDS--LDFVRAGSSSLFSGCTGSIAECIAEEEEMEFDSDI 67

Query: 72  NRRILADLNYISYDALKANTVPCSRRGASYYNCQPGAEANPYNRGCNAISRCR 118
           +RRILA   YISY A++ N+VPCSRRGASYYNCQ GA+ANPY+RGC+ I+RCR
Sbjct: 68  SRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQRGAQANPYSRGCSTITRCR 118

[Close]

BLAST of HG10022945 vs. TAIR 10
Match: AT3G16570.1 (rapid alkalinization factor 23 )

HSP 1 Score: 104.0 bits (258), Expect = 8.5e-23
Identity = 61/129 (47.29%), Postives = 78/129 (60.47%), Query Frame = 0


Query: 6   SSPLLFFFIATILTVSSTAVLTTSTKTP-SWVLDGARAHCHGSMAECMMD-------DI- 65
           S     F I  IL V + +V  +S  T  +         C G++AEC +        D+ 
Sbjct: 8   SGAAAIFAILLILAVHNWSVAVSSQSTEFAGDFPPFETECRGTIAECSVSAALGDGGDLF 67

Query: 66  --------EFEMNSDINRRILADLNYISYDALKANTVPCSRRGASYYNCQPGAEANPYNR 118
                   EFEM+S+INRRILA   YISY AL+ NT+PCSRRGASYYNC+ GA+ANPY+R
Sbjct: 68  YGGGEMGEEFEMDSEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRRGAQANPYSR 127

[Close]

BLAST of HG10022945 vs. TAIR 10
Match: AT1G28270.1 (ralf-like 4 )

HSP 1 Score: 76.6 bits (187), Expect = 1.5e-14
Identity = 37/64 (57.81%), Postives = 45/64 (70.31%), Query Frame = 0


Query: 54  DDIEFEMNSDINRRILA-DLNYISYDALKANTVPCSRRGASYYNCQPGAEANPYNRGCNA 113
           D++E  M+S+ NRR LA    YI YDALK N VPCSRRG SYY+C+     NPY RGC+A
Sbjct: 42  DELESLMDSETNRRQLARGRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRNNPYRRGCSA 101

Query: 114 ISRC 117
           I+ C
Sbjct: 102 ITHC 105

The following BLAST results are available for this feature:

BLAST of HG10022945 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896330.1	2.8e-52	91.53	protein RALF-like 33 [Benincasa hispida]	[more]
XP_022153599.1	5.7e-45	80.51	protein RALF-like 33 [Momordica charantia]	[more]
KAG7014377.1	3.1e-43	77.97	Protein RALF-like 33, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_011659776.1	4.1e-43	78.81	rapid alkalinization factor [Cucumis sativus]	[more]
XP_022953165.1	5.3e-43	77.97	rapid alkalinization factor-like [Cucurbita moschata]	[more]

BLAST of HG10022945 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q945T0	1.8e-25	62.35	Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1	[more]
Q9SRY3	2.0e-24	63.95	Protein RALF-like 1 OS=Arabidopsis thaliana OX=3702 GN=RALF1 PE=1 SV=1	[more]
Q8L9P8	2.0e-24	56.60	Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1	[more]
Q9MA62	4.8e-23	52.21	Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1	[more]
Q9LUS7	1.2e-21	47.29	Rapid alkalinization factor 23 OS=Arabidopsis thaliana OX=3702 GN=RALF23 PE=1 SV...	[more]

BLAST of HG10022945 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DJJ4	2.7e-45	80.51	protein RALF-like 33 OS=Momordica charantia OX=3673 GN=LOC111021064 PE=3 SV=1	[more]
A0A0A0K607	2.0e-43	78.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396340 PE=3 SV=1	[more]
A0A6J1GNW5	2.6e-43	77.97	rapid alkalinization factor-like OS=Cucurbita moschata OX=3662 GN=LOC111455786 P...	[more]
A0A5A7VLB3	6.3e-42	77.12	Rapid alkalinization factor-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A1S3BRF1	6.3e-42	77.12	rapid alkalinization factor-like OS=Cucumis melo OX=3656 GN=LOC103492893 PE=3 SV...	[more]

BLAST of HG10022945 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G02900.1	1.4e-25	63.95	rapid alkalinization factor 1	[more]
AT4G15800.1	1.4e-25	56.60	ralf-like 33	[more]
AT3G05490.1	3.4e-24	52.21	ralf-like 22	[more]
AT3G16570.1	8.5e-23	47.29	rapid alkalinization factor 23	[more]
AT1G28270.1	1.5e-14	57.81	ralf-like 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008801	Rapid ALkalinization Factor	PFAM	PF05498	RALF	coord: 57..117 e-value: 3.4E-27 score: 95.2
None	No IPR available	PANTHER	PTHR33136	RAPID ALKALINIZATION FACTOR-LIKE	coord: 11..118
None	No IPR available	PANTHER	PTHR33136:SF50	PROTEIN RALF-LIKE 33	coord: 11..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10022945.1	HG10022945.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019722	calcium-mediated signaling
cellular_component	GO:0005576	extracellular region
cellular_component	GO:0016020	membrane