HG10022917 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGCCATCAAATCCCTAATTTTCATACCTCTTCTCGCCCTTCTCTTCTTCTCCGAATACCTAGCCACTTCTGCCGCCGTTCGCGACGGCGCTTCCAATTCTCTTACCGGAATGCTCCGCCGGAACATCCTTCAGACGCCGGCTCATCAAATTGCAGATAACAATGTCGAGTCCTCTTCCGAACGGAAGATGAACGTTCATATCAAAAAAGGTGCAGGAGGCGGCGGCCGTTCATCGTCGACGCGTACATCGCCGACGCGGACGCGACCTGTATGGATTGGCAATCGCTCTGGCGGCCGTACATCGTCGGCGAATCGGAGCCGAGTCGCGTCCTTTGGCGTTGGATTTCTGCTCATTTTTTTGGGACTGTTCATGTGA ATGGCTGCCATCAAATCCCTAATTTTCATACCTCTTCTCGCCCTTCTCTTCTTCTCCGAATACCTAGCCACTTCTGCCGCCGTTCGCGACGGCGCTTCCAATTCTCTTACCGGAATGCTCCGCCGGAACATCCTTCAGACGCCGGCTCATCAAATTGCAGATAACAATGTCGAGTCCTCTTCCGAACGGAAGATGAACGTTCATATCAAAAAAGGTGCAGGAGGCGGCGGCCGTTCATCGTCGACGCGTACATCGCCGACGCGGACGCGACCTGTATGGATTGGCAATCGCTCTGGCGGCCGTACATCGTCGGCGAATCGGAGCCGAGTCGCGTCCTTTGGCGTTGGATTTCTGCTCATTTTTTTGGGACTGTTCATGTGA ATGGCTGCCATCAAATCCCTAATTTTCATACCTCTTCTCGCCCTTCTCTTCTTCTCCGAATACCTAGCCACTTCTGCCGCCGTTCGCGACGGCGCTTCCAATTCTCTTACCGGAATGCTCCGCCGGAACATCCTTCAGACGCCGGCTCATCAAATTGCAGATAACAATGTCGAGTCCTCTTCCGAACGGAAGATGAACGTTCATATCAAAAAAGGTGCAGGAGGCGGCGGCCGTTCATCGTCGACGCGTACATCGCCGACGCGGACGCGACCTGTATGGATTGGCAATCGCTCTGGCGGCCGTACATCGTCGGCGAATCGGAGCCGAGTCGCGTCCTTTGGCGTTGGATTTCTGCTCATTTTTTTGGGACTGTTCATGTGA MAAIKSLIFIPLLALLFFSEYLATSAAVRDGASNSLTGMLRRNILQTPAHQIADNNVESSSERKMNVHIKKGAGGGGRSSSTRTSPTRTRPVWIGNRSGGRTSSANRSRVASFGVGFLLIFLGLFM Homology
BLAST of HG10022917 vs. NCBI nr
Match: KAG6575859.1 (hypothetical protein SDJN03_26498, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014393.1 hypothetical protein SDJN02_24570, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 123.2 bits (308), Expect = 1.5e-24 Identity = 76/126 (60.32%), Postives = 87/126 (69.05%), Query Frame = 0
BLAST of HG10022917 vs. NCBI nr
Match: KAA0068047.1 (protein no-on-transient A-like [Cucumis melo var. makuwa] >TYK18081.1 protein no-on-transient A-like [Cucumis melo var. makuwa]) HSP 1 Score: 118.6 bits (296), Expect = 3.8e-23 Identity = 77/127 (60.63%), Postives = 89/127 (70.08%), Query Frame = 0
BLAST of HG10022917 vs. NCBI nr
Match: KGN44886.1 (hypothetical protein Csa_015765 [Cucumis sativus]) HSP 1 Score: 115.2 bits (287), Expect = 4.2e-22 Identity = 76/126 (60.32%), Postives = 85/126 (67.46%), Query Frame = 0
BLAST of HG10022917 vs. NCBI nr
Match: XP_008451666.1 (PREDICTED: protein no-on-transient A-like [Cucumis melo]) HSP 1 Score: 107.1 bits (266), Expect = 1.1e-19 Identity = 79/142 (55.63%), Postives = 87/142 (61.27%), Query Frame = 0
BLAST of HG10022917 vs. NCBI nr
Match: KAG6593163.1 (hypothetical protein SDJN03_12639, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 83.6 bits (205), Expect = 1.4e-12 Identity = 65/131 (49.62%), Postives = 78/131 (59.54%), Query Frame = 0
BLAST of HG10022917 vs. ExPASy TrEMBL
Match: A0A5A7VLE5 (Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00010 PE=4 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 1.8e-23 Identity = 77/127 (60.63%), Postives = 89/127 (70.08%), Query Frame = 0
BLAST of HG10022917 vs. ExPASy TrEMBL
Match: A0A0A0KAQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394060 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 2.0e-22 Identity = 76/126 (60.32%), Postives = 85/126 (67.46%), Query Frame = 0
BLAST of HG10022917 vs. ExPASy TrEMBL
Match: A0A1S3BRF6 (protein no-on-transient A-like OS=Cucumis melo OX=3656 GN=LOC103492900 PE=4 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 5.6e-20 Identity = 79/142 (55.63%), Postives = 87/142 (61.27%), Query Frame = 0
BLAST of HG10022917 vs. ExPASy TrEMBL
Match: A0A5A7VN87 (Protein no-on-transient A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00030 PE=4 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 6.2e-11 Identity = 48/72 (66.67%), Postives = 54/72 (75.00%), Query Frame = 0
BLAST of HG10022917 vs. ExPASy TrEMBL
Match: A0A5D3D3Y6 (E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001920 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 8.1e-11 Identity = 63/131 (48.09%), Postives = 76/131 (58.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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