HG10022901 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCCGAGTGTATGTTAAGGTTGGAGTTAAAAATCAAAATAATGAAGGTGGTTAGATCATATAAAGTTTGCTTATTTGCTTAATGCAGATTATTGAAGTTGTGATATCATCCATTAAGCTATTGACTCTTCTGTAAAAGGTGCAATAACTATCTCACTACAGTCTCTTCATTTATCACATCGTAAAAAGTAACAATAATTCAACTTTTTAAAAAAAGTCAAATTTTCATATCACATGGCAATTTTTAGTTGGACAACTAATGAGTTACGCAAAGATAAGTGTAGTCCAAACAACACCTAAGTATTAATATATATATATATATATATATATATATATAACTATCGAAGGTTTATATATTTTGTATGACAAAATAGTTACAAGTATAAAAGTAAGGAGACTAAAATTATTATATAATAAAGGCGTAACTAGCTAGTTATAATGTTTGTATTGTTATCCATTTTTATGAATATTAAGAAAAAAATAGAGATCCAAAAAAATGAAATAAATAATTAGAGCCAATGATAAGAAAACAAACACAAATTTTTAAAATCAATAACTAAGGGCTTAGTAAATTGACTATTGTTGAATTATTATTTTTTTACTATGTGATAAATAAAGGGATTGTAGGGAGATAGGTATATATATTACTATTCAGTTATAAAAGTCTATGAGATTGGTTATGGCTCCAACGGTGATCTGCTAAACTTTAGCATGCAAGTGTAAATTAAAGTTTCCTCCCATAATATGTGTGTACTGTTTCTTGATCAACACTACTCCAAACTCCCCCGTCTAACTAACTTAAATCGAACGTTGATGTTTATTTTCATTTTGAAGATAATTATGCTGATGTGAGTATTGTGGTCAGAGATGTCGAGGGTGAAGTTATGATGGCGACGACAAAATTTCTGCATCACGTTGGGTCGACGAGTATGATAGAAGGATTAGCAGTTGTTGAAGTTTTCCATTTGGCTATTGATTTGGGATTTTTTCCACTCGTTTTAGAATCAGACTCTTCTTGTGTGTTTTTCAGCTTCTTATACGTAATAGAGAGGATCTCAGAGTTAGGTATGCAGTTACAGGATCTTAAAAGAAAGATTTTGGATCCTATGTTGTTCAAATTCCAGTTTTGTCGTTTTAAAGGTAATGAGATGGCTCATGGTCTTGCTCAACTAACGTTTGCTAATCGGTGTGACGAAGCCTGGTCAGAGCCTTATCCCATAACTCTTTTGGATGTTGTTTAG ATGATCCGAGTGTATGTTAAGGTTGGAGTTAAAAATCAAAATAATGAAGGTGATAATTATGCTGATGTGAGTATTGTGGTCAGAGATGTCGAGGGTGAAGTTATGATGGCGACGACAAAATTTCTGCATCACGTTGGGTCGACGAGTATGATAGAAGGATTAGCAGTTGTTGAAGTTTTCCATTTGGCTATTGATTTGGGATTTTTTCCACTCGTTTTAGAATCAGACTCTTCTTGTGTGTTTTTCAGCTTCTTATACGTAATAGAGAGGATCTCAGAGTTAGGTATGCAGTTACAGGATCTTAAAAGAAAGATTTTGGATCCTATGTTGTTCAAATTCCAGTTTTGTCGTTTTAAAGGTAATGAGATGGCTCATGGTCTTGCTCAACTAACGTTTGCTAATCGGTGTGACGAAGCCTGGTCAGAGCCTTATCCCATAACTCTTTTGGATGTTGTTTAG ATGATCCGAGTGTATGTTAAGGTTGGAGTTAAAAATCAAAATAATGAAGGTGATAATTATGCTGATGTGAGTATTGTGGTCAGAGATGTCGAGGGTGAAGTTATGATGGCGACGACAAAATTTCTGCATCACGTTGGGTCGACGAGTATGATAGAAGGATTAGCAGTTGTTGAAGTTTTCCATTTGGCTATTGATTTGGGATTTTTTCCACTCGTTTTAGAATCAGACTCTTCTTGTGTGTTTTTCAGCTTCTTATACGTAATAGAGAGGATCTCAGAGTTAGGTATGCAGTTACAGGATCTTAAAAGAAAGATTTTGGATCCTATGTTGTTCAAATTCCAGTTTTGTCGTTTTAAAGGTAATGAGATGGCTCATGGTCTTGCTCAACTAACGTTTGCTAATCGGTGTGACGAAGCCTGGTCAGAGCCTTATCCCATAACTCTTTTGGATGTTGTTTAG MIRVYVKVGVKNQNNEGDNYADVSIVVRDVEGEVMMATTKFLHHVGSTSMIEGLAVVEVFHLAIDLGFFPLVLESDSSCVFFSFLYVIERISELGMQLQDLKRKILDPMLFKFQFCRFKGNEMAHGLAQLTFANRCDEAWSEPYPITLLDVV Homology
BLAST of HG10022901 vs. NCBI nr
Match: XP_022140628.1 (uncharacterized protein LOC111011237 [Momordica charantia]) HSP 1 Score: 77.8 bits (190), Expect = 9.0e-11 Identity = 47/146 (32.19%), Postives = 74/146 (50.68%), Query Frame = 0
BLAST of HG10022901 vs. NCBI nr
Match: TXG48983.1 (hypothetical protein EZV62_024858 [Acer yangbiense]) HSP 1 Score: 74.3 bits (181), Expect = 1.0e-09 Identity = 43/135 (31.85%), Postives = 72/135 (53.33%), Query Frame = 0
BLAST of HG10022901 vs. NCBI nr
Match: TXG47194.1 (hypothetical protein EZV62_026488 [Acer yangbiense]) HSP 1 Score: 70.1 bits (170), Expect = 1.9e-08 Identity = 46/146 (31.51%), Postives = 73/146 (50.00%), Query Frame = 0
BLAST of HG10022901 vs. NCBI nr
Match: XP_022139684.1 (uncharacterized protein LOC111010533 [Momordica charantia]) HSP 1 Score: 65.5 bits (158), Expect = 4.6e-07 Identity = 35/105 (33.33%), Postives = 60/105 (57.14%), Query Frame = 0
BLAST of HG10022901 vs. NCBI nr
Match: XP_024957833.1 (uncharacterized protein LOC112499264 [Citrus sinensis]) HSP 1 Score: 65.1 bits (157), Expect = 6.0e-07 Identity = 41/146 (28.08%), Postives = 68/146 (46.58%), Query Frame = 0
BLAST of HG10022901 vs. ExPASy TrEMBL
Match: A0A6J1CIF1 (uncharacterized protein LOC111011237 OS=Momordica charantia OX=3673 GN=LOC111011237 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 4.4e-11 Identity = 47/146 (32.19%), Postives = 74/146 (50.68%), Query Frame = 0
BLAST of HG10022901 vs. ExPASy TrEMBL
Match: A0A5C7GW84 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_024858 PE=4 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 4.8e-10 Identity = 43/135 (31.85%), Postives = 72/135 (53.33%), Query Frame = 0
BLAST of HG10022901 vs. ExPASy TrEMBL
Match: A0A5C7GQX3 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_026488 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 9.1e-09 Identity = 46/146 (31.51%), Postives = 73/146 (50.00%), Query Frame = 0
BLAST of HG10022901 vs. ExPASy TrEMBL
Match: A0A6J1CDQ4 (uncharacterized protein LOC111010533 OS=Momordica charantia OX=3673 GN=LOC111010533 PE=4 SV=1) HSP 1 Score: 65.5 bits (158), Expect = 2.2e-07 Identity = 35/105 (33.33%), Postives = 60/105 (57.14%), Query Frame = 0
BLAST of HG10022901 vs. ExPASy TrEMBL
Match: A0A6J5XRI2 (RNase H domain-containing protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS42313 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 6.5e-07 Identity = 49/152 (32.24%), Postives = 72/152 (47.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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