HG10022804 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGAAACGAAGAGCCATGAGCCTGACGTATCGAGTATTAGAGGGATGGGTAAGGTTTTCTTCCCCACTCCAGATTTGTCAATAGTATTTTGAACTCTCTTGAAAGTGTGAGAAAAGAGTTAGATATTACATTTTAGATTTGGTGGTTGAGGCAATTTGGTATATTGATCTTTATTACTAATTACTAGATCAAGGTGTTCAATGTTTGAGTCAAGCACTTGAAGGTGGGGATTTGAAGGAGAAAGAGCTAAGGGAAGAAACTTCTTCTCATGAACTTGAACCCTGCACTGCCCAAGCTCTGCATGGGCTTATTACTTTAGTTCACGACCACATGAGTGTTTCTGATCAAATTGAAGCCCTACAATCTAGTTCTACAAATGGTTCTGCAGATGAGGAGAGGATGAAGTTGACTAGTTTACATAGCTTGGAGAACGATCAAGTAGCTAACTTTATTTGGAATTTGGAACCATGTATTCTTCAGAAGGTCCTTCTCACCATGGCGGTGAGTTCTTTTCTCTTCTCTATTACATTTACAAGGTCGAAATTGTTTTTCATTGAAGGCCTGGAGGAAATTAGTTTATTCCAATTAGTGTCTGGTCTAATTAATAAATTGAGGTTTCACATTATTGTAATAGATGCATGAATATATTCCATGGATGTCGAACTATTTTTATTTCTAGTCAGTTACAGATGTGTGGAATTGTTCCTCTTTCTTTGCTTTCCCCTTCCTTTGTTTCTTCCTTAGCTTGTCATCTTATACTACTTTCTTTTCAATCTAGAATAACTTCCCAAGAACTCTAGAGGCTCTTATACTGCACTTGCTTTCACCAGTTGGAGCAGAAGTTCTTACTCGAAAATTTGATCAGATAGATCAACGAAACACCAAGGAGGATCAGTTAATTATATTATTACAGAGAAGTCTTATTTTTTCCTCTTATTCTGGAGGCTCGGGGAGATATCTGACTTTTGGCTTTTATCTCTTCATCTCAGGAAAAGATTCTACGAAGTTTTCTATAGTTCATTTGATGATCAATTTGCTGTGATGGATGCAATTCTAAACAGGAAAGAGTCTTTTGCCCGTCAGGTCATTGTAACTCTATCTGACAGCAATATTTTTATTTTCTTTTTAATTGTTTTATTTATTTATTCTCTATTTTACTTCAATCATGATATCTTCCCTGTTTATCATATTCATAGGATAGCTCTGTGCAATTTGTTTTAAATAATAGGGAGGATATGCCTTCTATCCTCTTTTTCTCTTTTCTCAGAACAAAATACTGAGCACACAAGTAGCTAGTAATTGTAATTGGTCTCGAAGGCAATCTTTGTGTGTGGGATAACAACAAAAGCTCTTCTCACATAGTTCTCGTCCTCCATAAATTTGGCTGGCCACAAATTGTAGAGGACACTCTGCAATTGTGTGCTCAGCTTTTGTTCATGTGAAATATCCACTTCTTTGTAGCTATCAGGCAACCTTGAAAAATGAGAAGCATATTTACTCATCCCAAACCGCCTTTTACTTTGGCAATTAATTTGATTGTAAGTTGACATTGAAAAGATCCTAATGAAATATAATATTATCTGCTTGCCTTTGAGGAACTGCAAATCTGTTTTTGGTTGTTACACTGTTCGGTTTCAAGACGAGAAGCAGTTTATTTATTTATTTTTTAACTTCAGTTTGATCAATTGCCTAAACCAGAGTTCTTTCTCCTCACAACCATAAATATCTCAAATATTTGTTCCCTTCCGTGAATTTGACATCTTTTGATAATTTTGAATCTCAAAGAATGTGCATGCTCTTTACCCATAGTTATCTAGTTTATTTATATTTTTTTTTTTTTTGAAACAACCCATAGTTTTCTAGTTATGCTCTCACTTATGTCTAATTTTTGAAATTTATTACGCCATTTCAGCATCTGTGTTTTGAAGGCAAAATATATTTATTTTCATTCTGCTTTTATTTATTTAAAAATATTATTATGCTCATCGCCATAGAATAGACAACTATTCATTTGTACTTTTTTTTATGCCTTCCCTAATAAAAATGCATGACCAGCGAATATGCTGTTGCAACGCTTTGAAACTTTACTTTTTGATTTTGTTGTGTTATTGTTATTAAACTTTACTTTAATTTCTGCGGCAGGTTTTCAAGAGTGTGCTGGATAGATATGCGGGAGTAAAAACTTAAATGGGCCAAATCCAGGAACTTGAAGAAGTCCTTTAAAGAAATTGGTCCTGCAGATTCTGGAGCATATCGATGCTATCAATTTTCTAAAGCTTTTCCTCAATTGGTACTGTTACGTATAAGTTATCCACAACTATGTAGAATATTAATCTTTACCTACTCTAGGCATTACCTTGTAATTTATTTCAGATCCATTTTATTTTGTAAATTTGTATAGGGAAGGAAATAAAAAGTTGCTTAAAATCAACCCCATTTAAGTTTCAATTTTATACTTTCATACCTCCATTTATCATCTAGTTTTACCCATAAAAACTGCCGAAGTAAATCAATGGTGAATGGACTTTTACATTTATGATTTACCCCATTTCTTCTAGCCAAGGAAATAAAATTCCTTTAGCTATCCTATTAAAAAGAATCCTTTAGTTAATAAGGTTAATGAGCTAAAATATCGTAATTCAGGAGTAATGACGTAAGCAGCAAGTGAGAACCCAAACGCTCCTGCCTGATACTTTAGTCGGTGATTAGATTACCTAGGAGCTTCTATTTATCTACAGATAAGAGTGAAAAGTACATTAGGATCCAGAACCAATGACCCTCTTTTCAACTACTCTCCTACTTTGACCCATTTTACCCCTATGATGTCGTCATTATTCTTCTGGCTGTATGTGAACTGAACTTTGCTAAGATGACGACAAGGATAGGAAACCCATTCTGATAGGCCTAATTAGAACGAATTTGTGGAGGGAGTTAGATGGGGAATGTAATTTGTATTGAATATTCTTTTCTTGTAGAGTGGGGAGTTCCAAGATAGGTTTTAGAAAAAAGGATTGAGGTTAACATAGGGGTCTGCAGTAGAAGGGGGGAAAAAAAAGGAGAGAAAAGCATTGGAAAAGAAGGGTCTGTAAATAAACAAGATTGGAAGGAAGAAAAGAGGGAAAAGAAAAGTTAGTTGAGATGAGATTCCCTGATGGATGATGACATGGGCAGGTAAATTTAATAGAAGAAGAGGGAGGGGAGAGGGAATAGAAGCTTTTTGGTTTTTGTTTGTTTGTGCACCATAGAGGGGAGATAAAAAAAAAAGATGCAGTCTTTTTTACCAGGCAAATGGCATATTGTACCTTAATCCTGCAACTCATGCACATACTTTCTAAAAGCTAGGATATACCATAATGCCCAACCCTCCTTTCATTAATCCCCAGGTTCTTTCTTTCTCTCTCTCTCTCTGTGTTTTTGTCTCTCCCTGCTCTCTCTCTCTTTCTCTGTGAATATCCTTACCTTTTCTTTGGTTAAGTTGATAAGCTTTTACCATTTTTGAAATTTTCTATGTGGTTATTATTATTGTTATTATTTTAAATTCCAAAACCCTTTTATCCAAAGTAAGCTGACTGCATTTTTACACAGTGGCTGCAGGAATCATATAAAGGTAGATGCACCACTTTGCATTATCACCATGGCTTTTTACTCTCTCATCAACTTAGGAGAATATTAAATATATATATACACTAAATTGATTTGACCTCTTATAAATTCCTGTGCTATGTGCTATGTTTTCCTATGTTAATTCGAACATAACTCAACAATTATACATTGATAGGTTGATTGGTTCACATTTCTACCCTTACAATTACACTGCTATATTTTCAAAGTATTTTGTTGGAATTGAAAAGTTTCTAGTCACAGAACATGAGAATGTATCCATATAAAAAGATTAAAAAAAAAAAAAACTCTCCCTTTTTTGTTTTAAAGTAAAGTATATGATTTCTTTTCAAGCATGCTGAAGAATATATATGTTGCTGCACCAATGATTGATTATGATGATCTTATAACAGTAGACTAGACTAAATGAGAAAGTAGAGAAGGACAAGGTTTAAGACAATAATTGGGATGTTATTGCAGGTTAAGCTGCCTACTAAAGGTGTGGGGAATATGCACAGAAATTGATAAAGCCTCTCTTAGCAACAACAACAAAAGAAAAGACTCACCACAGAATTGCAATTCAAACTTCCAGAGCTCTTTGTTGGTATCATTTTCATCCCCGTTGACATTTTTCTTTCCTGTCTTTAATTTTTTTTTTTCTTCTTTTTTCTTTTCTTTTCCTTTTCTTTTCTTTTTCTTCCTTTAGGTTTTAGTTTGCATCAGTACCCAAGTCCCGGACCACCACCACAATCCATCACTCACTGAGGCACAAATTCACATAACTCCATCAACTTAG ATGGATGAAACGAAGAGCCATGAGCCTGACGTATCGAGTATTAGAGGGATGGATCAAGGTGTTCAATGTTTGAGTCAAGCACTTGAAGGTGGGGATTTGAAGGAGAAAGAGCTAAGGGAAGAAACTTCTTCTCATGAACTTGAACCCTGCACTGCCCAAGCTCTGCATGGGCTTATTACTTTAGTTCACGACCACATGAGTGTTTCTGATCAAATTGAAGCCCTACAATCTAGTTCTACAAATGGTTCTGCAGATGAGGAGAGGATGAAGTTGACTAGTTTACATAGCTTGGAGAACGATCAAGTAGCTAACTTTATTTGGAATTTGGAACCATGTATTCTTCAGAAGGTCCTTCTCACCATGGCGAATAACTTCCCAAGAACTCTAGAGGCTCTTATACTGCACTTGCTTTCACCAGTTGGAGCAGAAGTTCTTACTCGAAAATTTGATCAGATAGATCAACGAAACACCAAGGAGGATCAGAAAAGATTCTACGAAGTTTTCTATAGTTCATTTGATGATCAATTTGCTGTGATGGATGCAATTCTAAACAGGAAAGAGTCTTTTGCCCGTCAGGTTTTAGTTTGCATCAGTACCCAAGTCCCGGACCACCACCACAATCCATCACTCACTGAGGCACAAATTCACATAACTCCATCAACTTAG ATGGATGAAACGAAGAGCCATGAGCCTGACGTATCGAGTATTAGAGGGATGGATCAAGGTGTTCAATGTTTGAGTCAAGCACTTGAAGGTGGGGATTTGAAGGAGAAAGAGCTAAGGGAAGAAACTTCTTCTCATGAACTTGAACCCTGCACTGCCCAAGCTCTGCATGGGCTTATTACTTTAGTTCACGACCACATGAGTGTTTCTGATCAAATTGAAGCCCTACAATCTAGTTCTACAAATGGTTCTGCAGATGAGGAGAGGATGAAGTTGACTAGTTTACATAGCTTGGAGAACGATCAAGTAGCTAACTTTATTTGGAATTTGGAACCATGTATTCTTCAGAAGGTCCTTCTCACCATGGCGAATAACTTCCCAAGAACTCTAGAGGCTCTTATACTGCACTTGCTTTCACCAGTTGGAGCAGAAGTTCTTACTCGAAAATTTGATCAGATAGATCAACGAAACACCAAGGAGGATCAGAAAAGATTCTACGAAGTTTTCTATAGTTCATTTGATGATCAATTTGCTGTGATGGATGCAATTCTAAACAGGAAAGAGTCTTTTGCCCGTCAGGTTTTAGTTTGCATCAGTACCCAAGTCCCGGACCACCACCACAATCCATCACTCACTGAGGCACAAATTCACATAACTCCATCAACTTAG MDETKSHEPDVSSIRGMDQGVQCLSQALEGGDLKEKELREETSSHELEPCTAQALHGLITLVHDHMSVSDQIEALQSSSTNGSADEERMKLTSLHSLENDQVANFIWNLEPCILQKVLLTMANNFPRTLEALILHLLSPVGAEVLTRKFDQIDQRNTKEDQKRFYEVFYSSFDDQFAVMDAILNRKESFARQVLVCISTQVPDHHHNPSLTEAQIHITPST Homology
BLAST of HG10022804 vs. NCBI nr
Match: XP_008451321.1 (PREDICTED: uncharacterized protein LOC103492647 isoform X3 [Cucumis melo] >XP_016901082.1 PREDICTED: uncharacterized protein LOC103492647 isoform X3 [Cucumis melo]) HSP 1 Score: 332.8 bits (852), Expect = 2.3e-87 Identity = 175/202 (86.63%), Postives = 186/202 (92.08%), Query Frame = 0
BLAST of HG10022804 vs. NCBI nr
Match: XP_016901081.1 (PREDICTED: uncharacterized protein LOC103492647 isoform X2 [Cucumis melo]) HSP 1 Score: 332.8 bits (852), Expect = 2.3e-87 Identity = 175/202 (86.63%), Postives = 186/202 (92.08%), Query Frame = 0
BLAST of HG10022804 vs. NCBI nr
Match: XP_008451320.1 (PREDICTED: uncharacterized protein LOC103492647 isoform X1 [Cucumis melo] >XP_016901079.1 PREDICTED: uncharacterized protein LOC103492647 isoform X1 [Cucumis melo] >XP_016901080.1 PREDICTED: uncharacterized protein LOC103492647 isoform X1 [Cucumis melo]) HSP 1 Score: 332.8 bits (852), Expect = 2.3e-87 Identity = 175/202 (86.63%), Postives = 186/202 (92.08%), Query Frame = 0
BLAST of HG10022804 vs. NCBI nr
Match: XP_008451322.1 (PREDICTED: uncharacterized protein LOC103492647 isoform X4 [Cucumis melo] >XP_016901083.1 PREDICTED: uncharacterized protein LOC103492647 isoform X4 [Cucumis melo]) HSP 1 Score: 330.1 bits (845), Expect = 1.5e-86 Identity = 171/194 (88.14%), Postives = 180/194 (92.78%), Query Frame = 0
BLAST of HG10022804 vs. NCBI nr
Match: TYK26197.1 (jmjC domain-containing protein C isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 329.3 bits (843), Expect = 2.5e-86 Identity = 170/193 (88.08%), Postives = 180/193 (93.26%), Query Frame = 0
BLAST of HG10022804 vs. ExPASy TrEMBL
Match: A0A1S3BR94 (uncharacterized protein LOC103492647 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492647 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 1.1e-87 Identity = 175/202 (86.63%), Postives = 186/202 (92.08%), Query Frame = 0
BLAST of HG10022804 vs. ExPASy TrEMBL
Match: A0A1S3BR69 (uncharacterized protein LOC103492647 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492647 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 1.1e-87 Identity = 175/202 (86.63%), Postives = 186/202 (92.08%), Query Frame = 0
BLAST of HG10022804 vs. ExPASy TrEMBL
Match: A0A1S4DYM1 (uncharacterized protein LOC103492647 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492647 PE=4 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 1.1e-87 Identity = 175/202 (86.63%), Postives = 186/202 (92.08%), Query Frame = 0
BLAST of HG10022804 vs. ExPASy TrEMBL
Match: A0A1S3BS01 (uncharacterized protein LOC103492647 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103492647 PE=4 SV=1) HSP 1 Score: 330.1 bits (845), Expect = 7.1e-87 Identity = 171/194 (88.14%), Postives = 180/194 (92.78%), Query Frame = 0
BLAST of HG10022804 vs. ExPASy TrEMBL
Match: A0A5D3DR79 (JmjC domain-containing protein C isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G001260 PE=4 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 1.2e-86 Identity = 170/193 (88.08%), Postives = 180/193 (93.26%), Query Frame = 0
BLAST of HG10022804 vs. TAIR 10
Match: AT5G19840.2 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 143.7 bits (361), Expect = 1.8e-34 Identity = 82/177 (46.33%), Postives = 115/177 (64.97%), Query Frame = 0
BLAST of HG10022804 vs. TAIR 10
Match: AT5G19840.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein ) HSP 1 Score: 142.1 bits (357), Expect = 5.3e-34 Identity = 76/155 (49.03%), Postives = 102/155 (65.81%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|