HG10022776 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10022776
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionPentatricopeptide repeat-containing protein
LocationChr05: 28160243 .. 28162105 (-)
RNA-Seq ExpressionHG10022776
SyntenyHG10022776
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCGAAGACTGTGGCTTCAGCTTCTTCCAAACCTAACCATTTACTCTCCTCCTCTCTATTTACTCACTACTCTCCAAAAATTCCATTGTCAAATCATCCTAAATGCCAACCCCAACCCCTTGCATCACCGGAAAACTTCAATTCACGGATTTCCTTTCAACACCGGCTTCCGACGTTCTTACAGAATTGCAGAACAGGTAAGATTACTGCAACCCAAGCATTACATTTCTTTGACTTAATGATGCGTTCAAATCCTACCCCTCCCATATCTTCATTCAATCATTTACTTGGTGGACTTGCTAAGATTAACCACTACTCTGAGGTTTTTCAGCTGTATTATAAAATGCACCTAGCTGGAATTTTGCCTAATTTCTTCACGCTCAATATTTTGATGAATTGCCTTTGTAATGTGAATCGTGTTATCGAAGGTCTTGCGGCCATGGCGAGGATTTTCAGGAGTGGTTATATTCCTAATAAAATGACATATACGACCTTGATTAAGGGCTTGTGTGTGGAACATAGGATTAGTGAAGCCACACAGTTATTTATGAGAATGCAAAAGTTAGGTTGTAACCCTAATATGGTTACTTATGGGACTTTAATCAAGGGACTTTGTGGAACAGGGAATACTAACATTGCACTTAAGTTGCATCAACAAATGCTCAATGACACTAGTCAATATGGGATTAATTGTAAGCCTAATGTTATTTGCTATAATATCATTATAGATGGGCTTTGTAAGGATGGACACCAAGACGAGGCAAGAGAACTTTTCGAGGAAATAAAAGCTCGGGGAATGATTCCAGATGCTACTTCTTATACCTCTTTGATTCATGGAGTTTGCTGTGGTGGAAAATGGGAGGAGGCTAAACGTTTGTTAAATGAGATGGTGGATCAAGGTGTTCAACCAAATGTGGTCACATTTAATGTGTTGATTGATATGTTTGGCAAGGCAGGAAAGGTTATCGAGGCTAAGGAGTTGCTAGAGATGATGATTAAAAGAGGTAATGTTCCAGATTTGTTTACTTATAATTCACTGATTGAGGGGTTTTGTTTGGTTGGTGACCTGAATAGTGCCAAGGAGCTATTCGTTAGTATGCCAAGTAAGGGATGTGAACCTAATGTGATTAGCTACAATGTGCTAATAAATGGGTATTGTAAAACTCGGAAGGTGGAAGAAGCAATGAAGCTTTACAATGAAATGCTTCTAGTGGGAAAGAGGCTAGATGTGAAAACATATGGTGCCTTGTTAACCGGGCTTTTTCAGGCAGGTAAGGTTGGTGATGCAAAGAAGCTACTTGGTGTTATGAAAGCTTATGGTATTTCTGAAGATTCATATATATATGGTATTTTTTTAGATGGGTTGTGTAAGAATGGCTGTTTATTTGAAGCGATCGAACTTTTTAATGTGCTGAAATCATGCAACTTGAAATTGAATATTGAAAGCTTTAGTTGTCTAATTGATGGCCTATGCAAAGCAGGGAAACTTGAAACTGCTTGGGAGCTTTTCGAAAAACTATCCCAGGAAGGGCTTCAACCAGATGTTGTGACTTATTCCATTATGATCCATGGGTTTTGTAAAGATGGACAAGTAGATAAGGCAAATATTTTGTTTCAAAAGATGGAAGAAAATGGTTGTACTCCCAACATAATTACTTATAATACCCTTTTGCGTGGTTTATGCGAGAGTAATAAATCAGAGGAGGTGGTTCAACTTCTTCATAGGATGGTTCAGAAGGATGTGTCGCCAGATGCTGACATTTGCACCATAGTCGCAGACATGCTTTGCAAAGATGTAAAATATCAAGAATGTCTTGACTTGGTTCAAGATTTTCCTGCCCAAGAGCGTCGACATTGA

mRNA sequence

ATGGCTTCGAAGACTGTGGCTTCAGCTTCTTCCAAACCTAACCATTTACTCTCCTCCTCTCTATTTACTCACTACTCTCCAAAAATTCCATTGTCAAATCATCCTAAATGCCAACCCCAACCCCTTGCATCACCGGAAAACTTCAATTCACGGATTTCCTTTCAACACCGGCTTCCGACGTTCTTACAGAATTGCAGAACAGGTAAGATTACTGCAACCCAAGCATTACATTTCTTTGACTTAATGATGCGTTCAAATCCTACCCCTCCCATATCTTCATTCAATCATTTACTTGGTGGACTTGCTAAGATTAACCACTACTCTGAGGTTTTTCAGCTGTATTATAAAATGCACCTAGCTGGAATTTTGCCTAATTTCTTCACGCTCAATATTTTGATGAATTGCCTTTGTAATGTGAATCGTGTTATCGAAGGTCTTGCGGCCATGGCGAGGATTTTCAGGAGTGGTTATATTCCTAATAAAATGACATATACGACCTTGATTAAGGGCTTGTATGGGTTGTGTAAGAATGGCTGTTTATTTGAAGCGATCGAACTTTTTAATGTGCTGAAATCATGCAACTTGAAATTGAATATTGAAAGCTTTAGTTGTCTAATTGATGGCCTATGCAAAGCAGGGAAACTTGAAACTGCTTGGGAGCTTTTCGAAAAACTATCCCAGGAAGGGCTTCAACCAGATGTTGTGACTTATTCCATTATGATCCATGGGTTTTGTAAAGATGGACAAGTAGATAAGGCAAATATTTTGTTTCAAAAGATGGAAGAAAATGGTTGTACTCCCAACATAATTACTTATAATACCCTTTTGCGTGGTTTATGCGAGAGTAATAAATCAGAGGAGGTGGTTCAACTTCTTCATAGGATGGTTCAGAAGGATGTGTCGCCAGATGCTGACATTTGCACCATAGTCGCAGACATGCTTTGCAAAGATGTAAAATATCAAGAATGTCTTGACTTGGTTCAAGATTTTCCTGCCCAAGAGCGTCGACATTGA

Coding sequence (CDS)

ATGGCTTCGAAGACTGTGGCTTCAGCTTCTTCCAAACCTAACCATTTACTCTCCTCCTCTCTATTTACTCACTACTCTCCAAAAATTCCATTGTCAAATCATCCTAAATGCCAACCCCAACCCCTTGCATCACCGGAAAACTTCAATTCACGGATTTCCTTTCAACACCGGCTTCCGACGTTCTTACAGAATTGCAGAACAGGTAAGATTACTGCAACCCAAGCATTACATTTCTTTGACTTAATGATGCGTTCAAATCCTACCCCTCCCATATCTTCATTCAATCATTTACTTGGTGGACTTGCTAAGATTAACCACTACTCTGAGGTTTTTCAGCTGTATTATAAAATGCACCTAGCTGGAATTTTGCCTAATTTCTTCACGCTCAATATTTTGATGAATTGCCTTTGTAATGTGAATCGTGTTATCGAAGGTCTTGCGGCCATGGCGAGGATTTTCAGGAGTGGTTATATTCCTAATAAAATGACATATACGACCTTGATTAAGGGCTTGTATGGGTTGTGTAAGAATGGCTGTTTATTTGAAGCGATCGAACTTTTTAATGTGCTGAAATCATGCAACTTGAAATTGAATATTGAAAGCTTTAGTTGTCTAATTGATGGCCTATGCAAAGCAGGGAAACTTGAAACTGCTTGGGAGCTTTTCGAAAAACTATCCCAGGAAGGGCTTCAACCAGATGTTGTGACTTATTCCATTATGATCCATGGGTTTTGTAAAGATGGACAAGTAGATAAGGCAAATATTTTGTTTCAAAAGATGGAAGAAAATGGTTGTACTCCCAACATAATTACTTATAATACCCTTTTGCGTGGTTTATGCGAGAGTAATAAATCAGAGGAGGTGGTTCAACTTCTTCATAGGATGGTTCAGAAGGATGTGTCGCCAGATGCTGACATTTGCACCATAGTCGCAGACATGCTTTGCAAAGATGTAAAATATCAAGAATGTCTTGACTTGGTTCAAGATTTTCCTGCCCAAGAGCGTCGACATTGA

Protein sequence

MASKTVASASSKPNHLLSSSLFTHYSPKIPLSNHPKCQPQPLASPENFNSRISFQHRLPTFLQNCRTGKITATQALHFFDLMMRSNPTPPISSFNHLLGGLAKINHYSEVFQLYYKMHLAGILPNFFTLNILMNCLCNVNRVIEGLAAMARIFRSGYIPNKMTYTTLIKGLYGLCKNGCLFEAIELFNVLKSCNLKLNIESFSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYSIMIHGFCKDGQVDKANILFQKMEENGCTPNIITYNTLLRGLCESNKSEEVVQLLHRMVQKDVSPDADICTIVADMLCKDVKYQECLDLVQDFPAQERRH
Homology
BLAST of HG10022776 vs. NCBI nr
Match: XP_038877920.1 (pentatricopeptide repeat-containing protein At1g63330-like isoform X1 [Benincasa hispida])

HSP 1 Score: 428.7 bits (1101), Expect = 4.6e-116
Identity = 278/627 (44.34%), Postives = 297/627 (47.37%), Query Frame = 0

Query: 1   MASKTVASASS----KPNHLLSSSLFTHYSPKIPLSNHPKCQPQPLASPE----NFNSRI 60
           MASK+VASASS         LSSSLFT  SP IP SNHPKC PQPLASPE    NFN+ +
Sbjct: 19  MASKSVASASSIVSVSSKGKLSSSLFTR-SPTIPSSNHPKCPPQPLASPEISPQNFNTGL 78

Query: 61  SFQHRLPTFLQNCRTGKITATQALHFFDLMMRSNPTPPISSFNHLLGGLAKINHYSEVFQ 120
            FQ RL TFLQNCRTGKIT T+ALHFFDLMM S+PTPP+SSFN LLGGLAKI HYS+VFQ
Sbjct: 79  LFQRRLHTFLQNCRTGKITPTEALHFFDLMMHSSPTPPMSSFNLLLGGLAKIKHYSQVFQ 138

Query: 121 LYYKMHLAGILPNFFTLNILMNCLCNVNRVIEGLAAMARIFRSGYIPNKMTYTTLIKGLY 180
           LYYKMHLAG  PNFFTLNILMNCLCNVNRV EGLAAMARIFR GY+PNKMTYTTLIKGL 
Sbjct: 139 LYYKMHLAGFFPNFFTLNILMNCLCNVNRVSEGLAAMARIFRCGYVPNKMTYTTLIKGLC 198

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 199 MELRINEATRLFMRMQKLGCMPDVVTYGTLIKELCRTGNVNIALKLHQEMLNDTGQYGIN 258

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 259 CKPNVICYHIIIDGLCKDGREDEAKELLDKMKAQGMVPNVFPYNSLIHSFCCSGNWKEAK 318

Query: 301 ------------------------------------------------------------ 337
                                                                       
Sbjct: 319 RLLNEMVDQGVQPNVVTFNVLIDMFCKAGKVIKAKELLEIMTHRGTLPDLFTYNSLIEGF 378

BLAST of HG10022776 vs. NCBI nr
Match: XP_038896203.1 (pentatricopeptide repeat-containing protein At1g63330-like [Benincasa hispida])

HSP 1 Score: 386.7 bits (992), Expect = 2.0e-103
Identity = 256/628 (40.76%), Postives = 283/628 (45.06%), Query Frame = 0

Query: 1   MASKTVASASSK---PNHLLSSSLFTHYSPKIPL-------SNHPKCQPQPLASPENFNS 60
           MASKT+ SASS     +    SSLFTH SP IP        SNHPK  PQPL SP+NF +
Sbjct: 8   MASKTLPSASSTVSISSQPKLSSLFTH-SPTIPSSIPQISPSNHPKSPPQPLPSPQNFIT 67

Query: 61  RISFQHRLPTFLQNCRTGKITATQALHFFDLMMRSNPTPPISSFNHLLGGLAKINHYSEV 120
           RIS QHRLPTFLQNCR GKITAT+ALHFFDLM+RSNPTPP  SFN LLGGLA+I HYS+V
Sbjct: 68  RISSQHRLPTFLQNCRIGKITATEALHFFDLMLRSNPTPPTYSFNLLLGGLAQIKHYSQV 127

Query: 121 FQLYYKMHLAGILPNFFTLNILMNCLCNVNRVIEGLAAMARIFRSGYIPNKMTYTTLIKG 180
           F LY KM LAG+ PNFFTLNIL+NCLCNVNRV EG AAMA I R GYIP+K+TY+TLIKG
Sbjct: 128 FSLYNKMCLAGLFPNFFTLNILINCLCNVNRVSEGFAAMAGILRRGYIPDKITYSTLIKG 187

Query: 181 LY---------------------------------------------------------- 240
           L                                                           
Sbjct: 188 LCMEYRISEATRLFMRMQKLGCRPDVVTYGTLIKGLCRTGNINIALKLHQEMLNETGQYG 247

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 248 INCKPNVICYSSIIDGLCKDRREDEASELFEEMKTRGMIPDVISYTSLIHGFCWGGKWEE 307

Query: 301 ------------------------------------------------------------ 336
                                                                       
Sbjct: 308 AKRLFNEMVDQGVQPDMVTFNVLIDMLCKEGKVIEAKKLLDVMIQRGIVPNLVTYNSLIE 367

BLAST of HG10022776 vs. NCBI nr
Match: XP_011659000.1 (pentatricopeptide repeat-containing protein At1g62720 isoform X2 [Cucumis sativus] >KAE8646074.1 hypothetical protein Csa_015569 [Cucumis sativus])

HSP 1 Score: 343.2 bits (879), Expect = 2.5e-90
Identity = 213/434 (49.08%), Postives = 251/434 (57.83%), Query Frame = 0

Query: 3   SKTVASASS----KPNHLLSSSLFTH------YSPKIPLSNHPKCQPQPLASPENFNSRI 62
           + TVASASS         L SSLFTH       +P+I  +N+PK      ASPE    RI
Sbjct: 5   TNTVASASSAVAISSEVKLLSSLFTHSPAVLSSNPQISSANNPKSLH---ASPE----RI 64

Query: 63  SFQHRLPTFLQNCRTGKITATQALHFFDLMMRSNPTPPISSFNHLLGGLAKINHYSEVFQ 122
           SFQH +P FL  C+TG I+ TQA  FFDLMMRS     I SFN LL GLAKI HYS+VF 
Sbjct: 65  SFQHGIPMFLHKCKTGSISVTQAHQFFDLMMRS-----IFSFNRLLAGLAKIEHYSQVFS 124

Query: 123 LYYKMHLAGILPNFFTLNILMNCLCNVNRVIEGLAAMARIFRSGYIPNKMTYTTLIKGLY 182
           LY +MHLAG+ P+  TLNIL+NCLCNVNR+ EGLAAMA I R GYIP+ +T+TTLIKGL 
Sbjct: 125 LYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLC 184

Query: 183 ------------------------------------------------------------ 242
                                                                       
Sbjct: 185 VEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFN 244

Query: 243 -------------GLCKNGCLFEAIELFNVLKSCNLKLNIESFSCLIDGLCK-------- 302
                        GLCK G   EAI LFN +    ++ N+ +FS LID LCK        
Sbjct: 245 CRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAK 304

Query: 303 --------AGKLETAWELFEKLSQEGLQPDVVTYSIMIHGFCKDGQVDKANILFQKMEEN 338
                    GKLETAWELFEKL +EG+QPD + YS MIHGFCK GQVDKANILFQKMEEN
Sbjct: 305 KLLEMMIQIGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEEN 364

BLAST of HG10022776 vs. NCBI nr
Match: XP_011659273.2 (pentatricopeptide repeat-containing protein At3g22470, mitochondrial [Cucumis sativus] >KAE8646303.1 hypothetical protein Csa_016074 [Cucumis sativus])

HSP 1 Score: 339.0 bits (868), Expect = 4.8e-89
Identity = 238/624 (38.14%), Postives = 267/624 (42.79%), Query Frame = 0

Query: 1   MASKT-VASASSKPNHLLSSSLFTHYS------PKIPLSNHPKCQPQPLASPENFN-SRI 60
           M SKT + S S KPN    S L TH S      P+   ++H    P P+  P  FN   I
Sbjct: 1   MPSKTLLPSPSFKPN---LSPLSTHSSTIPSSIPQTSSTHH----PNPIL-PAAFNREEI 60

Query: 61  SFQHRLPTFLQNCRTGKITATQALHFFDLMMRSNPTPPISSFNHLLGGLAKINHYSEVFQ 120
           SF H L  FL+NC+TG ITA QA HFFDLMMRS+P PPISSFN LLGGLAKINHYS++F 
Sbjct: 61  SFHHPLSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFS 120

Query: 121 LYYKMHLAGILPNFFTLNILMNCLCNVNRVIEGLAAMARIFRSGYIPNKMTYTTLIKGLY 180
           LY +M LAG+ P+ FTL+IL NCLCNVNRV E LAAMA I R GYIPN +TYTTLIKGL 
Sbjct: 121 LYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLC 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 MEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVN 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 CKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSK 300

Query: 301 ------------------------------------------------------------ 334
                                                                       
Sbjct: 301 HLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGF 360

BLAST of HG10022776 vs. NCBI nr
Match: KGN45331.2 (hypothetical protein Csa_015776 [Cucumis sativus])

HSP 1 Score: 338.6 bits (867), Expect = 6.3e-89
Identity = 237/624 (37.98%), Postives = 267/624 (42.79%), Query Frame = 0

Query: 1   MASKT-VASASSKPN---HLLSSSLFTHYSPKIPLSNHPKCQPQPLASPENFNSR-ISFQ 60
           M SKT + SAS KPN       SS      P+   +NHP         P  FN + ISF 
Sbjct: 1   MHSKTLLPSASFKPNLSPLCTLSSTIPSSIPQTSSTNHPN-----TVLPAAFNRKGISFH 60

Query: 61  HRLPTFLQNCRTGKITATQALHFFDLMMRSNPTPPISSFNHLLGGLAKINHYSEVFQLYY 120
           H L  FL+NC+TG ITATQA HFFDLM+RS P PPISSFN LLGGLAKINHYS++F LY 
Sbjct: 61  HPLSLFLRNCKTGNITATQAFHFFDLMLRSYPIPPISSFNCLLGGLAKINHYSQLFSLYN 120

Query: 121 KMHLAGILPNFFTLNILMNCLCNVNRVIEGLAAMARIFRSGYIPNKMTYTTLIKGLY--- 180
           KM LAG+ P+ FTL+IL NCLCNVNRV E LAAMA I R GYIPN +TY TLIKGL    
Sbjct: 121 KMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYNTLIKGLCMEH 180

Query: 181 ------------------------------------------------------------ 240
                                                                       
Sbjct: 181 RISEATRFFLRMQKLGCTPNVVTYGTLIKGLCRTGNINMALKLYQEMLNYASHYGINCKP 240

Query: 241 ------------------------------------------------------------ 300
                                                                       
Sbjct: 241 DVITYSIIIDGLCKVGRDDEAKELFEKMKAQGMIPNVISYSSLIHGLCCAGKWEESKRLF 300

Query: 301 ------------------------------------------------------------ 337
                                                                       
Sbjct: 301 DEMWDEGVQPDKVTFNVLIHTLSKEGKVSEAKKLLEVMIQRGIVPDLVTYNSVIHAFCKV 360

BLAST of HG10022776 vs. ExPASy Swiss-Prot
Match: Q0WKV3 (Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12300 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 2.8e-39
Identity = 98/311 (31.51%), Postives = 157/311 (50.48%), Query Frame = 0

Query: 53  SFQHRLPTFLQNCRTG--KITATQALHFFDLMMRSNPTPPISSFNHLLGGLAKINHYSEV 112
           +F  R  ++ +  R+G   I A  A+  F  M+ S P P +  F+ L   +AK   Y  V
Sbjct: 48  AFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLV 107

Query: 113 FQLYYKMHLAGILPNFFTLNILMNCLCNVNRVIEGLAAMARIFRSGYIPNKMTYTTLIKG 172
             L  +M L GI  N +TL+I++NC C   ++    +AM +I + GY PN +T++TLI  
Sbjct: 108 LALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLIN- 167

Query: 173 LYGLCKNGCLFEAIELFNVLKSCNLKLNIESFSCLIDGLCKAGKLETAWELFEKLSQEGL 232
             GLC  G + EA+EL + +     K ++ + + L++GLC +GK   A  L +K+ + G 
Sbjct: 168 --GLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGC 227

Query: 233 QPDVVT-----------------------------------YSIMIHGFCKDGQVDKANI 292
           QP+ VT                                   YSI+I G CK G +D A  
Sbjct: 228 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 287

Query: 293 LFQKMEENGCTPNIITYNTLLRGLCESNKSEEVVQLLHRMVQKDVSPDADICTIVADMLC 327
           LF +ME  G T NIITYN L+ G C + + ++  +LL  M+++ ++P+    +++ D   
Sbjct: 288 LFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFV 347

BLAST of HG10022776 vs. ExPASy Swiss-Prot
Match: P0C7Q7 (Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12700 PE=3 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 8.1e-39
Identity = 82/281 (29.18%), Postives = 154/281 (54.80%), Query Frame = 0

Query: 49  NSRISFQHRLPTFLQNCRTGKITATQALHFFDLMMRSNPTPPISSFNHLLGGLAKINHYS 108
           N  + F+ RL + + +     I    A+  F  M+RS P P +  F+     +A+   ++
Sbjct: 51  NGNVCFRERLRSGIVD-----IKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFN 110

Query: 109 EVFQLYYKMHLAGILPNFFTLNILMNCLCNVNRVIEGLAAMARIFRSGYIPNKMTYTTLI 168
            V     ++ L GI  N +TLNI++NC C   +     + + ++ + GY P+  T+ TLI
Sbjct: 111 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI 170

Query: 169 KGLYGLCKNGCLFEAIELFNVLKSCNLKLNIESFSCLIDGLCKAGKLETAWELFEKLSQE 228
           KGL+     G + EA+ L + +     + ++ +++ +++G+C++G    A +L  K+ + 
Sbjct: 171 KGLF---LEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER 230

Query: 229 GLQPDVVTYSIMIHGFCKDGQVDKANILFQKMEENGCTPNIITYNTLLRGLCESNKSEEV 288
            ++ DV TYS +I   C+DG +D A  LF++ME  G   +++TYN+L+RGLC++ K  + 
Sbjct: 231 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDG 290

Query: 289 VQLLHRMVQKDVSPDADICTIVADMLCKDVKYQECLDLVQD 330
             LL  MV +++ P+     ++ D+  K+ K QE  +L ++
Sbjct: 291 ALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323

BLAST of HG10022776 vs. ExPASy Swiss-Prot
Match: Q9ASZ8 (Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX=3702 GN=At1g12620 PE=2 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 3.4e-37
Identity = 93/322 (28.88%), Postives = 159/322 (49.38%), Query Frame = 0

Query: 37  CQPQPLASPENFNSRISFQHRLPTFLQNCRTGKITATQALHFFDLMMRSNPTPPISSFNH 96
           C  +  +S  +   ++S++ RL + + +     I    A+  F  M RS P P +  F+ 
Sbjct: 23  CYGRVFSSVSDGKGKVSYRERLRSGIVD-----IKEDDAVDLFQEMTRSRPRPRLIDFSR 82

Query: 97  LLGGLAKINHYSEVFQLYYKMHLAGILPNFFTLNILMNCLCNVNRVIEGLAAMARIFRSG 156
           L   +A+   Y  V  L  +M L GI  N +TL+I++NC C   ++    +AM +I + G
Sbjct: 83  LFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLG 142

Query: 157 YIPNKMTYTTLIKGL--------------------------------YGLCKNGCLFEAI 216
           Y P+ +T++TLI GL                                 GLC NG + +A+
Sbjct: 143 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV 202

Query: 217 ELFNVLKSCNLKLNIESFSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYSIMIHGF 276
            L + +     + N  ++  ++  +CK+G+   A EL  K+ +  ++ D V YSI+I G 
Sbjct: 203 LLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 262

Query: 277 CKDGQVDKANILFQKMEENGCTPNIITYNTLLRGLCESNKSEEVVQLLHRMVQKDVSPDA 327
           CKDG +D A  LF +ME  G   +II Y TL+RG C + + ++  +LL  M+++ ++PD 
Sbjct: 263 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 322

BLAST of HG10022776 vs. ExPASy Swiss-Prot
Match: Q9LPX2 (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 7.6e-37
Identity = 86/292 (29.45%), Postives = 147/292 (50.34%), Query Frame = 0

Query: 70  ITATQALHFFDLMMRSNPTPPISSFNHLLGGLAKINHYSEVFQLYYKMHLAGILPNFFTL 129
           I A  A+  F  M++S P P +  FN L   +AK   Y  V  L  +M   GI  + +TL
Sbjct: 67  IKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTL 126

Query: 130 NILMNCLCNVNRVIEGLAAMARIFRSGYIPNKMTYTTLIKGL------------------ 189
           +I++NC C   ++    + M +I + GY P+ + + TL+ GL                  
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186

Query: 190 --------------YGLCKNGCLFEAIELFNVLKSCNLKLNIESFSCLIDGLCKAGKLET 249
                          GLC NG + +A+ L + +     + N  ++  +++ +CK+G+   
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246

Query: 250 AWELFEKLSQEGLQPDVVTYSIMIHGFCKDGQVDKANILFQKMEENGCTPNIITYNTLLR 309
           A EL  K+ +  ++ D V YSI+I G CKDG +D A  LF +ME  G   +IITYNTL+ 
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306

Query: 310 GLCESNKSEEVVQLLHRMVQKDVSPDADICTIVADMLCKDVKYQECLDLVQD 330
           G C + + ++  +LL  M+++ +SP+    +++ D   K+ K +E   L+++
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358

BLAST of HG10022776 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 8.4e-36
Identity = 80/268 (29.85%), Postives = 145/268 (54.10%), Query Frame = 0

Query: 65  CRTGKITATQALHFFDLMMRSNPTPPISSFNHLLGGLAKINHYSEVFQLYYKMHLAGILP 124
           C+ G+I   +A H   LM     TP + S++ ++ G  +     +V++L   M   G+ P
Sbjct: 257 CQLGRI--KEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKP 316

Query: 125 NFFTLNILMNCLCNVNRVIEGLAAMARIFRSGYIPNKMTYTTLIKGLYGLCKNGCLFEAI 184
           N +    ++  LC + ++ E   A + + R G +P+ + YTTLI    G CK G +  A 
Sbjct: 317 NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID---GFCKRGDIRAAS 376

Query: 185 ELFNVLKSCNLKLNIESFSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYSIMIHGF 244
           + F  + S ++  ++ +++ +I G C+ G +  A +LF ++  +GL+PD VT++ +I+G+
Sbjct: 377 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 436

Query: 245 CKDGQVDKANILFQKMEENGCTPNIITYNTLLRGLCESNKSEEVVQLLHRMVQKDVSPDA 304
           CK G +  A  +   M + GC+PN++TY TL+ GLC+    +   +LLH M +  + P+ 
Sbjct: 437 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 496

Query: 305 DICTIVADMLCKDVKYQECLDLVQDFPA 333
                + + LCK    +E + LV +F A
Sbjct: 497 FTYNSIVNGLCKSGNIEEAVKLVGEFEA 519

BLAST of HG10022776 vs. ExPASy TrEMBL
Match: A0A0A0K5M0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G387770 PE=4 SV=1)

HSP 1 Score: 414.5 bits (1064), Expect = 4.4e-112
Identity = 226/373 (60.59%), Postives = 260/373 (69.71%), Query Frame = 0

Query: 1   MASKT-VASASSKPN---HLLSSSLFTHYSPKIPLSNHPKCQPQPLASPENFNSR-ISFQ 60
           M SKT + SAS KPN       SS      P+   +NHP         P  FN + ISF 
Sbjct: 1   MHSKTLLPSASFKPNLSPLCTLSSTIPSSIPQTSSTNHPN-----TVLPAAFNRKGISFH 60

Query: 61  HRLPTFLQNCRTGKITATQALHFFDLMMRSNPTPPISSFNHLLGGLAKINHYSEVFQLYY 120
           H L  FL+NC+TG ITATQA HFFDLM+RS P PPISSFN LLGGLAKINHYS++F LY 
Sbjct: 61  HPLSLFLRNCKTGNITATQAFHFFDLMLRSYPIPPISSFNCLLGGLAKINHYSQLFSLYN 120

Query: 121 KMHLAGILPNFFTLNILMNCLCNVNRVIEGLAAMARIFRSGYIPNKMTYTTLIKGLY--- 180
           KM LAG+ P+ FTL+IL NCLCNVNRV E +     + + G  PN  TY TL+ GL+   
Sbjct: 121 KMRLAGLSPDLFTLSILANCLCNVNRVEEAMNLYNEMLQVGKRPNATTYGTLLTGLFQTG 180

Query: 181 -----------------------------GLCKNGCLFEAIELFNVLKSCNLKLNIESFS 240
                                        GLCKNGCL+EA+E FN LKS N+KL+IES++
Sbjct: 181 KVGDAKKLFRVLKTYGISADSCIYRIFLDGLCKNGCLYEAMEHFNQLKSYNIKLDIESYN 240

Query: 241 CLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYSIMIHGFCKDGQVDKANILFQKMEEN 300
           CLIDGLCKAGKLETAWELFEKL QEGLQ DVVTY+IMIHGFCK GQVDKANILF+KMEEN
Sbjct: 241 CLIDGLCKAGKLETAWELFEKLYQEGLQSDVVTYNIMIHGFCKVGQVDKANILFEKMEEN 300

Query: 301 GCTPNIITYNTLLRGLCESNKSEEVVQLLHRMVQKDVSPDADICTIVADMLCKDVKYQEC 337
           GCTP+IITYNTLL G C+SNKS+EVV+LLH+M+Q+D+SPDA  C IV DML KD KYQEC
Sbjct: 301 GCTPDIITYNTLLCGFCQSNKSDEVVKLLHKMIQRDMSPDAISCNIVIDMLRKDEKYQEC 360

BLAST of HG10022776 vs. ExPASy TrEMBL
Match: A0A0A0K784 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G380110 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 1.3e-111
Identity = 226/373 (60.59%), Postives = 259/373 (69.44%), Query Frame = 0

Query: 1   MASKT-VASASSKPNHLLSSSLFTHYS------PKIPLSNHPKCQPQPLASPENFN-SRI 60
           M SKT + S S KPN    S L TH S      P+   ++H    P P+  P  FN   I
Sbjct: 1   MPSKTLLPSPSFKPN---LSPLSTHSSTIPSSIPQTSSTHH----PNPIL-PAAFNREEI 60

Query: 61  SFQHRLPTFLQNCRTGKITATQALHFFDLMMRSNPTPPISSFNHLLGGLAKINHYSEVFQ 120
           SF H L  FL+NC+TG ITA QA HFFDLMMRS+P PPISSFN LLGGLAKINHYS++F 
Sbjct: 61  SFHHPLSLFLRNCKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFS 120

Query: 121 LYYKMHLAGILPNFFTLNILMNCLCNVNRVIEGLAAMARIFRSGYIPNKMTYTTLIKGLY 180
           LY +M LAG+ P+ FTL+IL NCLCNVNRV E +     + + G  PN  TY TL+ GL+
Sbjct: 121 LYNEMRLAGLSPDLFTLSILANCLCNVNRVKEAMNLYNEMLQVGKRPNATTYGTLLTGLF 180

Query: 181 --------------------------------GLCKNGCLFEAIELFNVLKSCNLKLNIE 240
                                           GLCKN CLFEA+ELFN LKS N KLNIE
Sbjct: 181 QTGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIE 240

Query: 241 SFSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYSIMIHGFCKDGQVDKANILFQKM 300
           ++SCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTY+IMIHGFCK GQVD ANILF+KM
Sbjct: 241 NYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKM 300

Query: 301 EENGCTPNIITYNTLLRGLCESNKSEEVVQLLHRMVQKDVSPDADICTIVADMLCKDVKY 334
           EENGCTP+II YNTLL G CE NK EEV++LLH+MVQKDVSP+A  CTIV DMLCKD KY
Sbjct: 301 EENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKY 360

BLAST of HG10022776 vs. ExPASy TrEMBL
Match: A0A6J1DSW3 (pentatricopeptide repeat-containing protein At1g63330-like OS=Momordica charantia OX=3673 GN=LOC111022854 PE=4 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 1.3e-87
Identity = 238/636 (37.42%), Postives = 266/636 (41.82%), Query Frame = 0

Query: 2   ASKTVASASSKPNHLLSSSLFTHYSPKIP-----------------LSNHPKCQPQPLAS 61
           AS  VA +SS P     SSLFT  SP+I                  LS  PK    P  S
Sbjct: 9   ASSVVAVSSSAPAKGKLSSLFTQ-SPRIRSSNPQVSPGSSSKRPPLLSRPPKPTVSPEDS 68

Query: 62  PENFNSRISFQHRLPTFLQNCRTGKITATQALHFFDLMMRSNPTPPISSFNHLLGGLAKI 121
           PE   + ISFQ R  TFLQNC+TG +TA +AL FFDLM+R+ PTP +SSFN LLGGLAKI
Sbjct: 69  PEELTTGISFQDRHRTFLQNCKTGNVTAAEALQFFDLMLRTKPTPAMSSFNLLLGGLAKI 128

Query: 122 NHYSEVFQLYYKMHLAGILPNFFTLNILMNCLCNVNRVIEGLAAMARIFRSGYIPNKMTY 181
            HYSEV  LY +M LAGILPN+ TLNIL+NCLCNVNRV EGLAAMA I R GYIPN +TY
Sbjct: 129 KHYSEVLSLYDRMSLAGILPNYITLNILLNCLCNVNRVSEGLAAMAGIIRRGYIPNIVTY 188

Query: 182 TTLIKGLY---------------------------------------------------- 241
           T+LIKGL                                                     
Sbjct: 189 TSLIKGLCMEHRISEATRLFMRMQKLGCTPNVITYGTLIKGLCQTGNTNIALKLHEEMLN 248

Query: 242 ------------------------------------------------------------ 301
                                                                       
Sbjct: 249 GTGRYGITCKPNVICYSTIIDGLCKDGLEDKARELFEEMKAQGMLPDVISYSSLIHGFCY 308

Query: 302 ------------------------------------------------------------ 337
                                                                       
Sbjct: 309 GGKWEEAKSLFNEMVDHGVQPNVVTFNVLMDMLCKAGKVIEAKELLELMVQGGNNAPDLF 368

BLAST of HG10022776 vs. ExPASy TrEMBL
Match: A0A5A7TFD7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G001070 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 4.5e-85
Identity = 226/586 (38.57%), Postives = 259/586 (44.20%), Query Frame = 0

Query: 3   SKTVASASS----KPNHLLSSSLFTHYSPKIPLSNHPKCQPQPLASPENFNSRISFQHRL 62
           + TVASASS         + SSLFTH SP IP SN          S    + R+S QH L
Sbjct: 5   TNTVASASSIVAISSKAKILSSLFTH-SPSIPSSNPQIFSANHPKSLHALSERMSLQHGL 64

Query: 63  PTFLQNCRTGKITATQALHFFDLMMRSNPTPPISSFNHLLGGLAKINHYSEVFQLYYKMH 122
           P F+ NC+ G ITATQAL FF LMMRS     I SFN LLG LAKI HYS+VF LY KMH
Sbjct: 65  PMFIHNCKKGNITATQALQFFHLMMRS-----IISFNLLLGALAKIKHYSQVFSLYKKMH 124

Query: 123 LAGILPNFFTLNILMNCLCNVNRVIEGLAAMARIFRSGYIPNKMTYTTLIKGLY------ 182
           LAG+ PNFFTL+IL+NCLCNVNRV E L+AMA I R GYIP+ +TYT+LIKGL       
Sbjct: 125 LAGLSPNFFTLSILINCLCNVNRVREALSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRIS 184

Query: 183 ------------------------------------------------------------ 242
                                                                       
Sbjct: 185 EATKLFMRMPKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIV 244

Query: 243 ------------------------------------------------------------ 302
                                                                       
Sbjct: 245 SYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDMLCKEGMVIEAKKFLETM 304

Query: 303 ------------------------------------------------------------ 337
                                                                       
Sbjct: 305 MLRGIVPDLFTYTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTLNM 364

BLAST of HG10022776 vs. ExPASy TrEMBL
Match: A0A5A7UUW8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold111G00730 PE=4 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 1.3e-84
Identity = 212/562 (37.72%), Postives = 239/562 (42.53%), Query Frame = 0

Query: 57  RLPTFLQNCRTGKITATQALHFFDLMMRSNPTPPISSFNHLLGGLAKINHYSEVFQLYYK 116
           ++P FL+NC+TG ITA QA HFFDLM+RS P  PISSFN LLGGLAKINHYS++F LY K
Sbjct: 6   QIPIFLRNCKTGNITAIQAFHFFDLMVRSYPISPISSFNRLLGGLAKINHYSQLFSLYNK 65

Query: 117 MHLAGILPNFFTLNILMNCLCNVNRVIEGLAAMARIFRSGYIPNKMTYTTLIKGLY---- 176
           M LAG+ P+  TLNIL+NCLCNVNRV E LAA+A I R GYIP+ +TY TLIKGL     
Sbjct: 66  MCLAGLSPSVVTLNILVNCLCNVNRVSEALAALAGILRRGYIPDIVTYNTLIKGLCMEHR 125

Query: 177 ------------------------------------------------------------ 236
                                                                       
Sbjct: 126 ISEATRLFLRMQKLGCTPNVVTYGTLIKGLCQTGNVNIALKLHQEMLNDTSQYGINCKPN 185

Query: 237 ------------------------------------------------------------ 296
                                                                       
Sbjct: 186 VISYSIIIDGLCKVGREDEAKETFEEMKAQGMVPNVISYSSLIHGFCCAGKWDESKQLFD 245

Query: 297 ------------------------------------------------------------ 336
                                                                       
Sbjct: 246 EMVDQGVQPNKVTFSVLIDTLCKEGKVIEAKKLLELMIESGIVPNVFTYNSLLKGFCMVG 305

BLAST of HG10022776 vs. TAIR 10
Match: AT1G12300.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 164.1 bits (414), Expect = 2.0e-40
Identity = 98/311 (31.51%), Postives = 157/311 (50.48%), Query Frame = 0

Query: 53  SFQHRLPTFLQNCRTG--KITATQALHFFDLMMRSNPTPPISSFNHLLGGLAKINHYSEV 112
           +F  R  ++ +  R+G   I A  A+  F  M+ S P P +  F+ L   +AK   Y  V
Sbjct: 48  AFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLV 107

Query: 113 FQLYYKMHLAGILPNFFTLNILMNCLCNVNRVIEGLAAMARIFRSGYIPNKMTYTTLIKG 172
             L  +M L GI  N +TL+I++NC C   ++    +AM +I + GY PN +T++TLI  
Sbjct: 108 LALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLIN- 167

Query: 173 LYGLCKNGCLFEAIELFNVLKSCNLKLNIESFSCLIDGLCKAGKLETAWELFEKLSQEGL 232
             GLC  G + EA+EL + +     K ++ + + L++GLC +GK   A  L +K+ + G 
Sbjct: 168 --GLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGC 227

Query: 233 QPDVVT-----------------------------------YSIMIHGFCKDGQVDKANI 292
           QP+ VT                                   YSI+I G CK G +D A  
Sbjct: 228 QPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFN 287

Query: 293 LFQKMEENGCTPNIITYNTLLRGLCESNKSEEVVQLLHRMVQKDVSPDADICTIVADMLC 327
           LF +ME  G T NIITYN L+ G C + + ++  +LL  M+++ ++P+    +++ D   
Sbjct: 288 LFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFV 347

BLAST of HG10022776 vs. TAIR 10
Match: AT1G12700.1 (ATP binding;nucleic acid binding;helicases )

HSP 1 Score: 162.5 bits (410), Expect = 5.7e-40
Identity = 82/281 (29.18%), Postives = 154/281 (54.80%), Query Frame = 0

Query: 49  NSRISFQHRLPTFLQNCRTGKITATQALHFFDLMMRSNPTPPISSFNHLLGGLAKINHYS 108
           N  + F+ RL + + +     I    A+  F  M+RS P P +  F+     +A+   ++
Sbjct: 51  NGNVCFRERLRSGIVD-----IKKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFN 110

Query: 109 EVFQLYYKMHLAGILPNFFTLNILMNCLCNVNRVIEGLAAMARIFRSGYIPNKMTYTTLI 168
            V     ++ L GI  N +TLNI++NC C   +     + + ++ + GY P+  T+ TLI
Sbjct: 111 LVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLI 170

Query: 169 KGLYGLCKNGCLFEAIELFNVLKSCNLKLNIESFSCLIDGLCKAGKLETAWELFEKLSQE 228
           KGL+     G + EA+ L + +     + ++ +++ +++G+C++G    A +L  K+ + 
Sbjct: 171 KGLF---LEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEER 230

Query: 229 GLQPDVVTYSIMIHGFCKDGQVDKANILFQKMEENGCTPNIITYNTLLRGLCESNKSEEV 288
            ++ DV TYS +I   C+DG +D A  LF++ME  G   +++TYN+L+RGLC++ K  + 
Sbjct: 231 NVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDG 290

Query: 289 VQLLHRMVQKDVSPDADICTIVADMLCKDVKYQECLDLVQD 330
             LL  MV +++ P+     ++ D+  K+ K QE  +L ++
Sbjct: 291 ALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKE 323

BLAST of HG10022776 vs. TAIR 10
Match: AT1G12620.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 157.1 bits (396), Expect = 2.4e-38
Identity = 93/322 (28.88%), Postives = 159/322 (49.38%), Query Frame = 0

Query: 37  CQPQPLASPENFNSRISFQHRLPTFLQNCRTGKITATQALHFFDLMMRSNPTPPISSFNH 96
           C  +  +S  +   ++S++ RL + + +     I    A+  F  M RS P P +  F+ 
Sbjct: 23  CYGRVFSSVSDGKGKVSYRERLRSGIVD-----IKEDDAVDLFQEMTRSRPRPRLIDFSR 82

Query: 97  LLGGLAKINHYSEVFQLYYKMHLAGILPNFFTLNILMNCLCNVNRVIEGLAAMARIFRSG 156
           L   +A+   Y  V  L  +M L GI  N +TL+I++NC C   ++    +AM +I + G
Sbjct: 83  LFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLG 142

Query: 157 YIPNKMTYTTLIKGL--------------------------------YGLCKNGCLFEAI 216
           Y P+ +T++TLI GL                                 GLC NG + +A+
Sbjct: 143 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV 202

Query: 217 ELFNVLKSCNLKLNIESFSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYSIMIHGF 276
            L + +     + N  ++  ++  +CK+G+   A EL  K+ +  ++ D V YSI+I G 
Sbjct: 203 LLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 262

Query: 277 CKDGQVDKANILFQKMEENGCTPNIITYNTLLRGLCESNKSEEVVQLLHRMVQKDVSPDA 327
           CKDG +D A  LF +ME  G   +II Y TL+RG C + + ++  +LL  M+++ ++PD 
Sbjct: 263 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 322

BLAST of HG10022776 vs. TAIR 10
Match: AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 156.0 bits (393), Expect = 5.4e-38
Identity = 86/292 (29.45%), Postives = 147/292 (50.34%), Query Frame = 0

Query: 70  ITATQALHFFDLMMRSNPTPPISSFNHLLGGLAKINHYSEVFQLYYKMHLAGILPNFFTL 129
           I A  A+  F  M++S P P +  FN L   +AK   Y  V  L  +M   GI  + +TL
Sbjct: 67  IKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTL 126

Query: 130 NILMNCLCNVNRVIEGLAAMARIFRSGYIPNKMTYTTLIKGL------------------ 189
           +I++NC C   ++    + M +I + GY P+ + + TL+ GL                  
Sbjct: 127 SIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVE 186

Query: 190 --------------YGLCKNGCLFEAIELFNVLKSCNLKLNIESFSCLIDGLCKAGKLET 249
                          GLC NG + +A+ L + +     + N  ++  +++ +CK+G+   
Sbjct: 187 MGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246

Query: 250 AWELFEKLSQEGLQPDVVTYSIMIHGFCKDGQVDKANILFQKMEENGCTPNIITYNTLLR 309
           A EL  K+ +  ++ D V YSI+I G CKDG +D A  LF +ME  G   +IITYNTL+ 
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306

Query: 310 GLCESNKSEEVVQLLHRMVQKDVSPDADICTIVADMLCKDVKYQECLDLVQD 330
           G C + + ++  +LL  M+++ +SP+    +++ D   K+ K +E   L+++
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358

BLAST of HG10022776 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 152.5 bits (384), Expect = 5.9e-37
Identity = 80/268 (29.85%), Postives = 145/268 (54.10%), Query Frame = 0

Query: 65  CRTGKITATQALHFFDLMMRSNPTPPISSFNHLLGGLAKINHYSEVFQLYYKMHLAGILP 124
           C+ G+I   +A H   LM     TP + S++ ++ G  +     +V++L   M   G+ P
Sbjct: 257 CQLGRI--KEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKP 316

Query: 125 NFFTLNILMNCLCNVNRVIEGLAAMARIFRSGYIPNKMTYTTLIKGLYGLCKNGCLFEAI 184
           N +    ++  LC + ++ E   A + + R G +P+ + YTTLI    G CK G +  A 
Sbjct: 317 NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID---GFCKRGDIRAAS 376

Query: 185 ELFNVLKSCNLKLNIESFSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYSIMIHGF 244
           + F  + S ++  ++ +++ +I G C+ G +  A +LF ++  +GL+PD VT++ +I+G+
Sbjct: 377 KFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGY 436

Query: 245 CKDGQVDKANILFQKMEENGCTPNIITYNTLLRGLCESNKSEEVVQLLHRMVQKDVSPDA 304
           CK G +  A  +   M + GC+PN++TY TL+ GLC+    +   +LLH M +  + P+ 
Sbjct: 437 CKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNI 496

Query: 305 DICTIVADMLCKDVKYQECLDLVQDFPA 333
                + + LCK    +E + LV +F A
Sbjct: 497 FTYNSIVNGLCKSGNIEEAVKLVGEFEA 519

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038877920.14.6e-11644.34pentatricopeptide repeat-containing protein At1g63330-like isoform X1 [Benincasa... [more]
XP_038896203.12.0e-10340.76pentatricopeptide repeat-containing protein At1g63330-like [Benincasa hispida][more]
XP_011659000.12.5e-9049.08pentatricopeptide repeat-containing protein At1g62720 isoform X2 [Cucumis sativu... [more]
XP_011659273.24.8e-8938.14pentatricopeptide repeat-containing protein At3g22470, mitochondrial [Cucumis sa... [more]
KGN45331.26.3e-8937.98hypothetical protein Csa_015776 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Q0WKV32.8e-3931.51Pentatricopeptide repeat-containing protein At1g12300, mitochondrial OS=Arabidop... [more]
P0C7Q78.1e-3929.18Putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial OS... [more]
Q9ASZ83.4e-3728.88Pentatricopeptide repeat-containing protein At1g12620 OS=Arabidopsis thaliana OX... [more]
Q9LPX27.6e-3729.45Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop... [more]
Q0WVK78.4e-3629.85Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0K5M04.4e-11260.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G387770 PE=4 SV=1[more]
A0A0A0K7841.3e-11160.59Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G380110 PE=4 SV=1[more]
A0A6J1DSW31.3e-8737.42pentatricopeptide repeat-containing protein At1g63330-like OS=Momordica charanti... [more]
A0A5A7TFD74.5e-8538.57Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
A0A5A7UUW81.3e-8437.72Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
Match NameE-valueIdentityDescription
AT1G12300.12.0e-4031.51Tetratricopeptide repeat (TPR)-like superfamily protein [more]
AT1G12700.15.7e-4029.18ATP binding;nucleic acid binding;helicases [more]
AT1G12620.12.4e-3828.88Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G12775.15.4e-3829.45Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G05670.15.9e-3729.85Pentatricopeptide repeat (PPR-like) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 201..234
e-value: 3.2E-9
score: 34.4
coord: 235..269
e-value: 1.8E-10
score: 38.3
coord: 270..304
e-value: 3.4E-9
score: 34.3
coord: 93..125
e-value: 6.0E-5
score: 21.0
coord: 171..198
e-value: 0.003
score: 15.6
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 156..188
e-value: 6.5E-6
score: 25.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 91..138
e-value: 1.3E-9
score: 38.1
coord: 267..316
e-value: 1.6E-11
score: 44.2
coord: 198..246
e-value: 2.5E-17
score: 62.8
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 198..232
score: 13.044004
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 268..302
score: 12.539784
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 125..159
score: 8.758137
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 233..267
score: 14.260709
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 90..124
score: 8.911594
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 173..336
e-value: 7.8E-46
score: 158.8
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 58..172
e-value: 4.1E-19
score: 70.6
NoneNo IPR availablePANTHERPTHR47938RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATEDcoord: 42..171
NoneNo IPR availablePANTHERPTHR47938RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATEDcoord: 172..317
NoneNo IPR availablePANTHERPTHR47938:SF12PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 5, MITOCHONDRIALcoord: 42..171
NoneNo IPR availablePANTHERPTHR47938:SF12PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 5, MITOCHONDRIALcoord: 172..317

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10022776.1HG10022776.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding