HG10022712 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10022712
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Descriptionabasic site processing protein YoqW isoform X4
LocationChr05: 27443390 .. 27446809 (-)
RNA-Seq ExpressionHG10022712
SyntenyHG10022712
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGCCTTATTATCTAGTATCTGCAATGTGCAGTTCAATGCTCGCTCAGAGTCCATATGTGAAAAGGCCTCTTTTCGGCGTCTAGTTCCTAAAAGAAGGTGCCTTGTGGCAGTGGAAGGGTATGTTTTTGGAGAACCTCGAACTTTTATATTTATATGAATGTGTGTTTGTGTTCATCATCTGTCTTTACTCTTGCACAAACACCCTTATATCCTTGGTTCTATGGTAGGTTTTATGAGTGGAAAAAGGATGGATCAAAAAAGCAGCCGTATTATATCCATTTTAAGGATGGGCAGCCACTTGTTCTTGCTGCTTTATATGATTGTTGGGAGAATTCTGAAGGTATGTTTCTTTATGATCAAGCAAAAGATGACTTTTCTTTCTTTTCTTCTTTTTTAGGGATCTTGCCCTAATACTTTGCTTTCACCGTATCAATTTTTTTTTACTTCCTCCATCAAAAAGATAAGTTTTTTTATTTTATTTTCTTGTACTAGTTTCAGTCGATGTACCGGTTTTTTTGAACTTCTGGACTGGATACTAATTTATTGAAGTTCTATTCAATATTTGGTAATTTAGATATCTGATATTATTGACCAGATATTCAATGTACATCCTAGGAAGACCTATAATGTTCTTGATTTATTATTGTTTTTGCAGGAGAATTACTTCACACTTTTACCATTCTTACAACTTCATCATCTCCAGCTTTGGAGTGGTTGCACGGTCAGTCCTATCTTTTCTTATGGCTGTTTTAGATCACGTTTACAATTGGATTTGAACATTGTTAGGGATGTGATGGGACTTCTTGTCAATCTCTGATGTGGTTGCAATAATTTCTATTTTCTAATTGAAAAGATCATAGTATTAATGCCAAATTGTACAAGAGTGAAATTAACCTGAGTCGTGGTTTGAGGATTATAAGGAATTCCTGCTAGCCTTGATTAAAAAAAAAAAACAGAAGAGTGTTAGGACGTAGGTGATAGATTTAAGTATCCTTGAGAAGCAATCATTAGAAGTACATCTATTTCTAGACTTCCAAACATCCCATAATATAGTAGCCATTTTATTTCTCTGCAACTTGTCACATCATATGAAAGGAAGAAGAATCGGACAAAGGAAATACTAAGAGCCGCCTACTTGAAGTTACTGTTAAAGGATATACCAAAACTCTCCCAAAATTTTTGGGTAAAGGGGCAATATATGAATAAATATTCGGGAAATATATGAATAAATATACTATGTTCTCTCCTTTTTGAAAATAACACACATATAGGCTAAGCCACGCTTCTGTGGAGCACATAATTTGTTTAGGTAAGAAACGGTTGTCCATTAGTATTAAAAGAAGTGAATACGATATCCACCCAATCAAGCCACCAGGCCTTATAAAAATTATTCCCGATTGGCATTAATTGATAAAATAATAAACTTTAGATGAGGGAGAATTTGATTGTTTAGTGGCTGATGGGTGATCTGTTTAGATAGGATGCCTGTAATTTTGGGTGACAAAGAACGGATGGATATGTGGTTGAATGATTCTTCATCGTCCAAGTATGATGCTGTCCTTAAACCATATGAGGCTCCTGATTTGGTAAGAACTTTTTGAAAGGAAAAAAGTGACTTATGTTAATAATTCATTAATGTTTAAAATGTAAATGTTAGGTATGGTACCCTGTAACTCCATCCATGGGCAAGCCTTCATTTGATGGGCCAGACTGCATCAAGGAGGTATCTCATCTTGCCCGTTCTTTTTTACTTGGTCGATAGCTTTCCCATCCTGGTTGAAGTTTAAAAGTTATAGCATGTTGCTGGAGAAAATTTGAGTTACATTATTCTCATAGATTATGTGATGATTTAGTTTCTTCAGGACCAATTTATCTGAGGTCATATTTGTTTATTCACGTTTCTCGCCTCCAGTGGAACACTTCACAGCTAGTTTGTTTGTTTGTTTGTTATTTTAAATTTTATTTTGTTTTCTGGTTTATCATGATTGAGGAACGTACATATTATGTATATAGATATGTACTGCCGTGGTGATTGAAGTAGTGGATATAATACATAGATCAAAGTTCATTTTAATGCCTTTGTTCGGGCTTTTGCAAGAAATTATTTCTGCAATGATGTGATTTCTTCTTGTTCTTGATATTAGATAAAATGTTTGTGCGCCAAAGTGACGATTGAGTTTGTTGATAGGGAATGTTCCTGCTCTGATGTGAATATGACGAATGTTGTTTAGTTGATAGGATACATGAAATGGAGTCGTTTGAGAGACAATCTTTGGGCTAAAGACAAAATGTTCTACGGAATGTTCAAATAGCATTATGTTGTTTTCAATTCTGTTTTGGAATAAGATGAAAATGATTGGAATTTATATTTTATTTGTATACTAATTTGTTTGTTTAGACTTGCACGTGTCTTCTTCTTCTGGTGTAGTGACACTTGTAATTTGCTTAATCAATAATGAAAATAACTAGGATTTATGTTCACGTTGAATTCTTGAGTGTAGGCTTACACATTCACCATGGTGATGTGGGATGGGTATTAGAACTTTGACCTTAAGGAAGGTTATAATATCCTTTGTCATTGTGAGACCAGAGAATCATACTCATACTCTACATTAGAGTTCAATATATATAGGCATAAAGTCAAGCTAATAAGCTTCTAAATTTACACATGCTATAACATTTTTAGCTACTGAGCTATGCTGAAATTGGTCACTGTCATTTGTTAGGAAAAAACTGACGATTTTTTTTTATGGGCTTTCATATTTTGGTTAAATGAACACAAAACTCTCTCAAACATCTGTTTTTTTATCTTTTAGGAAATTTGATTAGTAACTTCATTTTCTAAAATATTTGAAAACATGTATTTTGTAGAAGTTATAACGATTTTAGTGTTCTTTAAAAATGATTGCGAATGTAGCATTAATCAATATGCTTTTATTTCACATGATAGTCATAGTCCTCGTTGATTTACATTAACGATTAACCTAATATAGATCAACAAGTAACATTGTTATGTCTTCTTCTGTAGATACAGCTAAAGAATGATGGAAGCAACCTCATCTCCAAATTTTTCTCTGCAAAAGAAATTCAAAAGGAACATTCAGACCCAGAAGAGAAAACTTTCTGTAACACATCTGTGAAGCATGAGGCATCGCCAAGTCTAGAAGAACATAAAAGAGATGTAAATCTTGAAGCTTCATTCGAAGAATCAAAGGATTTTCTTGCAAAGCGTTCATCTGATACTGCACCAACATGTCAAATAAAACGGGACCGTGAAGACATCTCATCTGAGTCCAAAAGTGGCATGGATGACGACAGTAAGGTAGGCAGCAATCCAAAGATAAGGAAGAAGGGAAGCCTAAAGAGTGGCAAGGACAACCAATCAACCCTCCTTTCATACTTTGGGAGGAAATAG

mRNA sequence

ATGTTTGCCTTATTATCTAGTATCTGCAATGTGCAGTTCAATGCTCGCTCAGAGTCCATATGTGAAAAGGCCTCTTTTCGGCGTCTAGTTCCTAAAAGAAGGTGCCTTGTGGCAGTGGAAGGGTTTTATGAGTGGAAAAAGGATGGATCAAAAAAGCAGCCGTATTATATCCATTTTAAGGATGGGCAGCCACTTGTTCTTGCTGCTTTATATGATTGTTGGGAGAATTCTGAAGGAGAATTACTTCACACTTTTACCATTCTTACAACTTCATCATCTCCAGCTTTGGAGTGGTTGCACGATAGGATGCCTGTAATTTTGGGTGACAAAGAACGGATGGATATGTGGTTGAATGATTCTTCATCGTCCAAGTATGATGCTGTCCTTAAACCATATGAGGCTCCTGATTTGGTATGGTACCCTGTAACTCCATCCATGGGCAAGCCTTCATTTGATGGGCCAGACTGCATCAAGGAGATACAGCTAAAGAATGATGGAAGCAACCTCATCTCCAAATTTTTCTCTGCAAAAGAAATTCAAAAGGAACATTCAGACCCAGAAGAGAAAACTTTCTGTAACACATCTGTGAAGCATGAGGCATCGCCAAGTCTAGAAGAACATAAAAGAGATGTAAATCTTGAAGCTTCATTCGAAGAATCAAAGGATTTTCTTGCAAAGCGTTCATCTGATACTGCACCAACATGTCAAATAAAACGGGACCGTGAAGACATCTCATCTGAGTCCAAAAGTGGCATGGATGACGACAGTAAGGTAGGCAGCAATCCAAAGATAAGGAAGAAGGGAAGCCTAAAGAGTGGCAAGGACAACCAATCAACCCTCCTTTCATACTTTGGGAGGAAATAG

Coding sequence (CDS)

ATGTTTGCCTTATTATCTAGTATCTGCAATGTGCAGTTCAATGCTCGCTCAGAGTCCATATGTGAAAAGGCCTCTTTTCGGCGTCTAGTTCCTAAAAGAAGGTGCCTTGTGGCAGTGGAAGGGTTTTATGAGTGGAAAAAGGATGGATCAAAAAAGCAGCCGTATTATATCCATTTTAAGGATGGGCAGCCACTTGTTCTTGCTGCTTTATATGATTGTTGGGAGAATTCTGAAGGAGAATTACTTCACACTTTTACCATTCTTACAACTTCATCATCTCCAGCTTTGGAGTGGTTGCACGATAGGATGCCTGTAATTTTGGGTGACAAAGAACGGATGGATATGTGGTTGAATGATTCTTCATCGTCCAAGTATGATGCTGTCCTTAAACCATATGAGGCTCCTGATTTGGTATGGTACCCTGTAACTCCATCCATGGGCAAGCCTTCATTTGATGGGCCAGACTGCATCAAGGAGATACAGCTAAAGAATGATGGAAGCAACCTCATCTCCAAATTTTTCTCTGCAAAAGAAATTCAAAAGGAACATTCAGACCCAGAAGAGAAAACTTTCTGTAACACATCTGTGAAGCATGAGGCATCGCCAAGTCTAGAAGAACATAAAAGAGATGTAAATCTTGAAGCTTCATTCGAAGAATCAAAGGATTTTCTTGCAAAGCGTTCATCTGATACTGCACCAACATGTCAAATAAAACGGGACCGTGAAGACATCTCATCTGAGTCCAAAAGTGGCATGGATGACGACAGTAAGGTAGGCAGCAATCCAAAGATAAGGAAGAAGGGAAGCCTAAAGAGTGGCAAGGACAACCAATCAACCCTCCTTTCATACTTTGGGAGGAAATAG

Protein sequence

MFALLSSICNVQFNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPLVLAALYDCWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSSSSKYDAVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQKEHSDPEEKTFCNTSVKHEASPSLEEHKRDVNLEASFEESKDFLAKRSSDTAPTCQIKRDREDISSESKSGMDDDSKVGSNPKIRKKGSLKSGKDNQSTLLSYFGRK
Homology
BLAST of HG10022712 vs. NCBI nr
Match: XP_038896829.1 (abasic site processing protein YoqW isoform X1 [Benincasa hispida])

HSP 1 Score: 491.1 bits (1263), Expect = 6.4e-135
Identity = 246/275 (89.45%), Postives = 256/275 (93.09%), Query Frame = 0

Query: 13  FNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPLVLAALYD 72
           FNARSESI EKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDG+PLVLAALYD
Sbjct: 85  FNARSESIREKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGRPLVLAALYD 144

Query: 73  CWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSSSSKYDAVLKPY 132
           CWEN EGELL+TFTILTTS+SPAL WLHDRMPVILGDKERMDMWLNDSSSSKYD VLKPY
Sbjct: 145 CWENPEGELLYTFTILTTSASPALLWLHDRMPVILGDKERMDMWLNDSSSSKYDTVLKPY 204

Query: 133 EAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQKEHSDPEEKTFC 192
           EAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFF AKEI+KEHSD +EKT C
Sbjct: 205 EAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFYAKEIKKEHSDSQEKTSC 264

Query: 193 NTSVKHEASPSLEEHKRDVNLEASFEESKDFLAKRSSDTAPTCQIKRDREDISSESKSGM 252
           NT VK EASPSLEEHK DVNL AS EESKD LAK SS+TAPTCQIKRDREDISS SKSG+
Sbjct: 265 NTYVKPEASPSLEEHKTDVNLRASSEESKDCLAKCSSETAPTCQIKRDREDISSVSKSGV 324

Query: 253 DDDSKVGSNPKIRKKGSLKSGKDNQSTLLSYFGRK 288
           DD SKVGS+PK RKKG+LK+G DNQSTL SYFGRK
Sbjct: 325 DDYSKVGSSPKKRKKGNLKAGNDNQSTLFSYFGRK 359

BLAST of HG10022712 vs. NCBI nr
Match: XP_038896830.1 (abasic site processing protein HMCES isoform X2 [Benincasa hispida])

HSP 1 Score: 482.6 bits (1241), Expect = 2.3e-132
Identity = 244/275 (88.73%), Postives = 254/275 (92.36%), Query Frame = 0

Query: 13  FNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPLVLAALYD 72
           FNARSESI EKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDG+PLVLAALYD
Sbjct: 85  FNARSESIREKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGRPLVLAALYD 144

Query: 73  CWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSSSSKYDAVLKPY 132
           CWEN EGELL+TFTILTTS+SPAL WLHDRMPVILGDKERMDMWLNDSSSSKYD VLKPY
Sbjct: 145 CWENPEGELLYTFTILTTSASPALLWLHDRMPVILGDKERMDMWLNDSSSSKYDTVLKPY 204

Query: 133 EAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQKEHSDPEEKTFC 192
           EAPDLVWYPVTPSMGKPSFDGPDCIKE  LKNDGSNLISKFF AKEI+KEHSD +EKT C
Sbjct: 205 EAPDLVWYPVTPSMGKPSFDGPDCIKE--LKNDGSNLISKFFYAKEIKKEHSDSQEKTSC 264

Query: 193 NTSVKHEASPSLEEHKRDVNLEASFEESKDFLAKRSSDTAPTCQIKRDREDISSESKSGM 252
           NT VK EASPSLEEHK DVNL AS EESKD LAK SS+TAPTCQIKRDREDISS SKSG+
Sbjct: 265 NTYVKPEASPSLEEHKTDVNLRASSEESKDCLAKCSSETAPTCQIKRDREDISSVSKSGV 324

Query: 253 DDDSKVGSNPKIRKKGSLKSGKDNQSTLLSYFGRK 288
           DD SKVGS+PK RKKG+LK+G DNQSTL SYFGRK
Sbjct: 325 DDYSKVGSSPKKRKKGNLKAGNDNQSTLFSYFGRK 357

BLAST of HG10022712 vs. NCBI nr
Match: XP_011659220.1 (uncharacterized protein LOC101206083 isoform X1 [Cucumis sativus] >KGN44679.1 hypothetical protein Csa_015996 [Cucumis sativus])

HSP 1 Score: 474.9 bits (1221), Expect = 4.8e-130
Identity = 240/275 (87.27%), Postives = 253/275 (92.00%), Query Frame = 0

Query: 13  FNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPLVLAALYD 72
           FNARSESI EKASF RLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPL LAALYD
Sbjct: 85  FNARSESIHEKASFHRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPLALAALYD 144

Query: 73  CWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSSSSKYDAVLKPY 132
           CWEN EGELL+TFTILTTSSSPAL+WLHDRMPVILGDKERMDMWLNDSSSSKYD+VLKPY
Sbjct: 145 CWENLEGELLYTFTILTTSSSPALKWLHDRMPVILGDKERMDMWLNDSSSSKYDSVLKPY 204

Query: 133 EAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQKEHSDPEEKTFC 192
           EAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKE +KE+S  +EKT  
Sbjct: 205 EAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKETKKEYSVSQEKTCS 264

Query: 193 NTSVKHEASPSLEEHKRDVNLEASFEESKDFLAKRSSDTAPTCQIKRDREDISSESKSGM 252
           NTSVK EASPSLEEHKR+VN  AS EESKD LAK SSDT+ T QIKRDREDISS+ KSGM
Sbjct: 265 NTSVKPEASPSLEEHKREVNRGASSEESKDCLAKCSSDTSLTYQIKRDREDISSDLKSGM 324

Query: 253 DDDSKVGSNPKIRKKGSLKSGKDNQSTLLSYFGRK 288
           DD SKVGS+PKIRKKG+LK+G DNQ TL SYFG+K
Sbjct: 325 DDYSKVGSSPKIRKKGNLKTGNDNQLTLFSYFGKK 359

BLAST of HG10022712 vs. NCBI nr
Match: XP_011659221.1 (uncharacterized protein LOC101206083 isoform X2 [Cucumis sativus])

HSP 1 Score: 466.5 bits (1199), Expect = 1.7e-127
Identity = 238/275 (86.55%), Postives = 251/275 (91.27%), Query Frame = 0

Query: 13  FNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPLVLAALYD 72
           FNARSESI EKASF RLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPL LAALYD
Sbjct: 85  FNARSESIHEKASFHRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPLALAALYD 144

Query: 73  CWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSSSSKYDAVLKPY 132
           CWEN EGELL+TFTILTTSSSPAL+WLHDRMPVILGDKERMDMWLNDSSSSKYD+VLKPY
Sbjct: 145 CWENLEGELLYTFTILTTSSSPALKWLHDRMPVILGDKERMDMWLNDSSSSKYDSVLKPY 204

Query: 133 EAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQKEHSDPEEKTFC 192
           EAPDLVWYPVTPSMGKPSFDGPDCIKE  LKNDGSNLISKFFSAKE +KE+S  +EKT  
Sbjct: 205 EAPDLVWYPVTPSMGKPSFDGPDCIKE--LKNDGSNLISKFFSAKETKKEYSVSQEKTCS 264

Query: 193 NTSVKHEASPSLEEHKRDVNLEASFEESKDFLAKRSSDTAPTCQIKRDREDISSESKSGM 252
           NTSVK EASPSLEEHKR+VN  AS EESKD LAK SSDT+ T QIKRDREDISS+ KSGM
Sbjct: 265 NTSVKPEASPSLEEHKREVNRGASSEESKDCLAKCSSDTSLTYQIKRDREDISSDLKSGM 324

Query: 253 DDDSKVGSNPKIRKKGSLKSGKDNQSTLLSYFGRK 288
           DD SKVGS+PKIRKKG+LK+G DNQ TL SYFG+K
Sbjct: 325 DDYSKVGSSPKIRKKGNLKTGNDNQLTLFSYFGKK 357

BLAST of HG10022712 vs. NCBI nr
Match: KAA0057630.1 (embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 461.1 bits (1185), Expect = 7.1e-126
Identity = 234/277 (84.48%), Postives = 249/277 (89.89%), Query Frame = 0

Query: 12  QFNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPLVLAALY 71
           +FNARSESI EK SF RLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDG+PL LAALY
Sbjct: 132 EFNARSESIHEKPSFHRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGKPLALAALY 191

Query: 72  DCWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSSSSKYDAVLKP 131
           DCWEN EGELL+TFTILTTS SPAL+WLHDRMPVILGDKERMDMWL+DSSSSKYD V KP
Sbjct: 192 DCWENLEGELLYTFTILTTSPSPALKWLHDRMPVILGDKERMDMWLDDSSSSKYDTVFKP 251

Query: 132 YEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEI-QKEHSDPEEKT 191
           YEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKE  +KEHSD ++KT
Sbjct: 252 YEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKETKKKEHSDSQDKT 311

Query: 192 FCNTSVKHEASPSLEEHKRDVNLEASFEESKDFLAKRSSDTAPTCQIKRDREDISSESKS 251
             NTSVK EASPSLEEHKR+ NL AS EES+D LAK SS T+ T QIKRDREDISS SKS
Sbjct: 312 SSNTSVKPEASPSLEEHKREANLGASSEESEDCLAKCSSVTSLTYQIKRDREDISSGSKS 371

Query: 252 GMDDDSKVGSNPKIRKKGSLKSGKDNQSTLLSYFGRK 288
           G+DD SK GS PKIRKKG+LK+G DNQ TL+SYFGRK
Sbjct: 372 GVDDYSKAGSRPKIRKKGNLKTGNDNQLTLVSYFGRK 408

BLAST of HG10022712 vs. ExPASy Swiss-Prot
Match: Q6P7N4 (Abasic site processing protein HMCES OS=Xenopus tropicalis OX=8364 GN=hmces PE=2 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 4.8e-24
Identity = 58/168 (34.52%), Postives = 95/168 (56.55%), Query Frame = 0

Query: 14  NARSESICEKASFR-RLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFK------------ 73
           N RS+++ EKA ++  L   +RC+V  +GFYEW++  S+KQPYYI+F             
Sbjct: 98  NCRSDTMTEKALYKASLFKGKRCVVLADGFYEWQRQNSEKQPYYIYFPQIKAEKSPAEQD 157

Query: 74  ----DGQPLV-LAALYDCWE-NSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMD 133
               +GQ L+ +A L+DCWE  + GE L+++T++T  SS  + W+HDRMP IL   E + 
Sbjct: 158 ITDWNGQRLLTMAGLFDCWEPPNGGETLYSYTVITVDSSKTMNWIHDRMPAILDGDEAVR 217

Query: 134 MWLNDSSSSKYDAVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQL 163
            WL+       DA+   +   ++ ++PV+  +     + P+C+  I L
Sbjct: 218 KWLDFGEVPTKDALKLIHPIENITYHPVSTVVNNSRNNTPECMAAIIL 265

BLAST of HG10022712 vs. ExPASy Swiss-Prot
Match: O31916 (Abasic site processing protein YoqW OS=Bacillus subtilis (strain 168) OX=224308 GN=yoqW PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.1e-23
Identity = 56/148 (37.84%), Postives = 86/148 (58.11%), Query Frame = 0

Query: 14  NARSESICEKASFRRLVPKRRCLVAVEGFYEWKK-DGSKKQPYYIHFKDGQPLVLAALYD 73
           NAR+E++ EK SFR+ +  +RC++  + FYEWK+ D   K P  I  K       A LY+
Sbjct: 76  NARAETLSEKPSFRKPLVSKRCIIPADSFYEWKRLDPKTKIPMRIKLKSSNLFAFAGLYE 135

Query: 74  CWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSSSSK--YDAVLK 133
            W   EG  L+T TI+TT  +  +E +HDRMPVIL D+   + WLN  ++      ++L+
Sbjct: 136 KWNTPEGNPLYTCTIITTKPNELMEDIHDRMPVILTDENEKE-WLNPKNTDPDYLQSLLQ 195

Query: 134 PYEAPDLVWYPVTPSMGKPSFDGPDCIK 159
           PY+A D+  Y V+  +  P  + P+ I+
Sbjct: 196 PYDADDMEAYQVSSLVNSPKNNSPELIE 222

BLAST of HG10022712 vs. ExPASy Swiss-Prot
Match: O64131 (SOS response-associated protein yoqW OS=Bacillus phage SPbeta OX=66797 GN=yoqW PE=3 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.1e-23
Identity = 56/148 (37.84%), Postives = 86/148 (58.11%), Query Frame = 0

Query: 14  NARSESICEKASFRRLVPKRRCLVAVEGFYEWKK-DGSKKQPYYIHFKDGQPLVLAALYD 73
           NAR+E++ EK SFR+ +  +RC++  + FYEWK+ D   K P  I  K       A LY+
Sbjct: 76  NARAETLSEKPSFRKPLVSKRCIIPADSFYEWKRLDPKTKIPMRIKLKSSNLFAFAGLYE 135

Query: 74  CWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSSSSK--YDAVLK 133
            W   EG  L+T TI+TT  +  +E +HDRMPVIL D+   + WLN  ++      ++L+
Sbjct: 136 KWNTPEGNPLYTCTIITTKPNELMEDIHDRMPVILTDENEKE-WLNPKNTDPDYLQSLLQ 195

Query: 134 PYEAPDLVWYPVTPSMGKPSFDGPDCIK 159
           PY+A D+  Y V+  +  P  + P+ I+
Sbjct: 196 PYDADDMEAYQVSSLVNSPKNNSPELIE 222

BLAST of HG10022712 vs. ExPASy Swiss-Prot
Match: Q6IND6 (Abasic site processing protein HMCES OS=Xenopus laevis OX=8355 GN=hmces PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.8e-23
Identity = 60/168 (35.71%), Postives = 93/168 (55.36%), Query Frame = 0

Query: 14  NARSESICEKASFRR-LVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFK------------ 73
           N RS++I EKA ++  L   RRC+V  +GFYEWK+   +KQPYYI+F             
Sbjct: 98  NCRSDTITEKALYKAPLFKGRRCVVLADGFYEWKRQDGEKQPYYIYFPQIKSEKFPEEQD 157

Query: 74  ----DGQPLV-LAALYDCWE-NSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMD 133
               +GQ L+ +A L+DCWE  S GE L+++T++T  SS  +  +HDRMP IL   E + 
Sbjct: 158 MMDWNGQRLLTMAGLFDCWEPPSGGEPLYSYTVITVDSSKTMNCIHDRMPAILDGDEAIR 217

Query: 134 MWLNDSSSSKYDAVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQL 163
            WL+    S  DA+   +   ++ ++PV+  +     +  +CI  + L
Sbjct: 218 KWLDFGEVSTQDALKLIHPIENITYHPVSTVVNNSRNNSTECIAAVIL 265

BLAST of HG10022712 vs. ExPASy Swiss-Prot
Match: O34915 (Abasic site processing protein YobE OS=Bacillus subtilis (strain 168) OX=224308 GN=yobE PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 9.0e-23
Identity = 55/139 (39.57%), Postives = 81/139 (58.27%), Query Frame = 0

Query: 14  NARSESICEKASFRRLVPKRRCLVAVEGFYEWKK-DGSKKQPYYIHFKDGQPLVLAALYD 73
           NAR+E++ EK SFR+ +  +RC++  + FYEWK+ D   K P  I  K       A LY+
Sbjct: 76  NARAETLAEKPSFRKPLGSKRCIIPADSFYEWKRLDPKTKIPMRIKLKSSNLFAFAGLYE 135

Query: 74  CWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSSSSK--YDAVLK 133
            W   EG LL+T TI+T   S  +E +HDRMPVIL D+ + + WLN  ++      ++L 
Sbjct: 136 KWNTLEGNLLYTCTIITIKPSELMEDIHDRMPVILTDENKKE-WLNPKNTDPDYLQSLLL 195

Query: 134 PYEAPDLVWYPVTPSMGKP 150
           PY+A D+  Y V+  +  P
Sbjct: 196 PYDADDMEAYQVSSLVNSP 213

BLAST of HG10022712 vs. ExPASy TrEMBL
Match: A0A0A0K6X8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G371760 PE=3 SV=1)

HSP 1 Score: 474.9 bits (1221), Expect = 2.3e-130
Identity = 240/275 (87.27%), Postives = 253/275 (92.00%), Query Frame = 0

Query: 13  FNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPLVLAALYD 72
           FNARSESI EKASF RLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPL LAALYD
Sbjct: 85  FNARSESIHEKASFHRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPLALAALYD 144

Query: 73  CWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSSSSKYDAVLKPY 132
           CWEN EGELL+TFTILTTSSSPAL+WLHDRMPVILGDKERMDMWLNDSSSSKYD+VLKPY
Sbjct: 145 CWENLEGELLYTFTILTTSSSPALKWLHDRMPVILGDKERMDMWLNDSSSSKYDSVLKPY 204

Query: 133 EAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQKEHSDPEEKTFC 192
           EAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKE +KE+S  +EKT  
Sbjct: 205 EAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKETKKEYSVSQEKTCS 264

Query: 193 NTSVKHEASPSLEEHKRDVNLEASFEESKDFLAKRSSDTAPTCQIKRDREDISSESKSGM 252
           NTSVK EASPSLEEHKR+VN  AS EESKD LAK SSDT+ T QIKRDREDISS+ KSGM
Sbjct: 265 NTSVKPEASPSLEEHKREVNRGASSEESKDCLAKCSSDTSLTYQIKRDREDISSDLKSGM 324

Query: 253 DDDSKVGSNPKIRKKGSLKSGKDNQSTLLSYFGRK 288
           DD SKVGS+PKIRKKG+LK+G DNQ TL SYFG+K
Sbjct: 325 DDYSKVGSSPKIRKKGNLKTGNDNQLTLFSYFGKK 359

BLAST of HG10022712 vs. ExPASy TrEMBL
Match: A0A5A7UR90 (Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold9829G00070 PE=3 SV=1)

HSP 1 Score: 461.1 bits (1185), Expect = 3.5e-126
Identity = 234/277 (84.48%), Postives = 249/277 (89.89%), Query Frame = 0

Query: 12  QFNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPLVLAALY 71
           +FNARSESI EK SF RLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDG+PL LAALY
Sbjct: 132 EFNARSESIHEKPSFHRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGKPLALAALY 191

Query: 72  DCWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSSSSKYDAVLKP 131
           DCWEN EGELL+TFTILTTS SPAL+WLHDRMPVILGDKERMDMWL+DSSSSKYD V KP
Sbjct: 192 DCWENLEGELLYTFTILTTSPSPALKWLHDRMPVILGDKERMDMWLDDSSSSKYDTVFKP 251

Query: 132 YEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEI-QKEHSDPEEKT 191
           YEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKE  +KEHSD ++KT
Sbjct: 252 YEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKETKKKEHSDSQDKT 311

Query: 192 FCNTSVKHEASPSLEEHKRDVNLEASFEESKDFLAKRSSDTAPTCQIKRDREDISSESKS 251
             NTSVK EASPSLEEHKR+ NL AS EES+D LAK SS T+ T QIKRDREDISS SKS
Sbjct: 312 SSNTSVKPEASPSLEEHKREANLGASSEESEDCLAKCSSVTSLTYQIKRDREDISSGSKS 371

Query: 252 GMDDDSKVGSNPKIRKKGSLKSGKDNQSTLLSYFGRK 288
           G+DD SK GS PKIRKKG+LK+G DNQ TL+SYFGRK
Sbjct: 372 GVDDYSKAGSRPKIRKKGNLKTGNDNQLTLVSYFGRK 408

BLAST of HG10022712 vs. ExPASy TrEMBL
Match: A0A6P4AC51 (uncharacterized protein LOC107426796 OS=Ziziphus jujuba OX=326968 GN=LOC107426796 PE=3 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 2.4e-87
Identity = 178/291 (61.17%), Postives = 215/291 (73.88%), Query Frame = 0

Query: 13  FNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPLVLAALYD 72
           FNARSESI EKASFRRLVP+ RCLVAVEGFYEWKKDGSKKQPYYIHFKDG+PLV AALYD
Sbjct: 87  FNARSESIGEKASFRRLVPRSRCLVAVEGFYEWKKDGSKKQPYYIHFKDGRPLVFAALYD 146

Query: 73  CWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSSSSKYDAVLKPY 132
            WENSEGE+ +TFTILTTSSS AL+WLHDRMPVILGDKE  D WL  SS++K+D +LKPY
Sbjct: 147 SWENSEGEMFYTFTILTTSSSSALKWLHDRMPVILGDKESSDKWLTGSSATKFDTLLKPY 206

Query: 133 EAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQKEHS-DPEEKTF 192
           E  DLVWYPVTP+MGKPSFDGP+CIKEI+LK +GSNL+SKFFS K I+KE     E+++ 
Sbjct: 207 ENSDLVWYPVTPAMGKPSFDGPECIKEIKLKTEGSNLLSKFFSPKGIKKESELKSEKEST 266

Query: 193 CNTSVKHEASPSLEEHKRD---------------VNLEASFEESKDFLAKRSSDTAPTCQ 252
            + SVK +   SL+E  ++                N E  F+ S+  L K   D A  CQ
Sbjct: 267 SDISVKSDLPKSLKEEPKEEPEPRESNEGQSSLTENEEQDFKSSEPTLPK---DDAGKCQ 326

Query: 253 IKRDREDISSESKSGMDDDSKVGSNPKIRKKGSLKSGKDN-QSTLLSYFGR 287
            KR  E++S++S+   D+  K+ ++P  +KKG+LKS  DN Q TL SYFG+
Sbjct: 327 TKRAYEELSADSELATDETEKLITSP-AKKKGNLKSAGDNKQPTLFSYFGK 373

BLAST of HG10022712 vs. ExPASy TrEMBL
Match: A0A1S3C6L7 (putative SOS response-associated peptidase YobE isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497636 PE=3 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 5.4e-87
Identity = 155/171 (90.64%), Postives = 161/171 (94.15%), Query Frame = 0

Query: 13  FNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPLVLAALYD 72
           FNARSESI EK SF RLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDG+PL LAALYD
Sbjct: 85  FNARSESIHEKPSFHRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGKPLALAALYD 144

Query: 73  CWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSSSSKYDAVLKPY 132
           CWEN EGELL+TFTILTTS SPAL+WLHDRMPVILGDKERMDMWL+DSSSSKYD V KPY
Sbjct: 145 CWENLEGELLYTFTILTTSPSPALKWLHDRMPVILGDKERMDMWLDDSSSSKYDTVFKPY 204

Query: 133 EAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQKEH 184
           EAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKE +K +
Sbjct: 205 EAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKETKKRN 255

BLAST of HG10022712 vs. ExPASy TrEMBL
Match: A0A6J1H9B1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111461258 OS=Cucurbita moschata OX=3662 GN=LOC111461258 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 4.6e-86
Identity = 155/171 (90.64%), Postives = 161/171 (94.15%), Query Frame = 0

Query: 13  FNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPLVLAALYD 72
           FNARSES+ EKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPLV AALYD
Sbjct: 85  FNARSESMSEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPLVFAALYD 144

Query: 73  CWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSSSSKYDAVLKPY 132
            WEN EGELL+TFTILTTSSSPALEWLHDRMPVILGDKER+DMWLNDSSSSKYD VLKPY
Sbjct: 145 SWENPEGELLYTFTILTTSSSPALEWLHDRMPVILGDKERIDMWLNDSSSSKYDNVLKPY 204

Query: 133 EAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQKEH 184
           EAPDLVWYPVTP+MGK SFDGPDCIKEIQLK DG+NLISKFFSAKE  K +
Sbjct: 205 EAPDLVWYPVTPAMGKLSFDGPDCIKEIQLKTDGNNLISKFFSAKETXKRN 255

BLAST of HG10022712 vs. TAIR 10
Match: AT2G26470.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF159 (InterPro:IPR003738); Has 3646 Blast hits to 3636 proteins in 1001 species: Archae - 41; Bacteria - 1922; Metazoa - 142; Fungi - 125; Plants - 44; Viruses - 14; Other Eukaryotes - 1358 (source: NCBI BLink). )

HSP 1 Score: 268.9 bits (686), Expect = 4.8e-72
Identity = 126/195 (64.62%), Postives = 157/195 (80.51%), Query Frame = 0

Query: 13  FNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPLVLAALYD 72
           FNARSES+ EKASFRRL+PK RCLVAV+GFYEWKK+GSKKQPYYIHF+DG+PLV AAL+D
Sbjct: 86  FNARSESVAEKASFRRLLPKNRCLVAVDGFYEWKKEGSKKQPYYIHFEDGRPLVFAALFD 145

Query: 73  CWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSSSSKYDAVLKPY 132
            W+NS GE L+TFTILTT+SS AL+WLHDRMPVILGDK+ +D WL+D S++K   +L PY
Sbjct: 146 TWQNSGGETLYTFTILTTASSSALQWLHDRMPVILGDKDSIDTWLDDPSTTKLQPLLSPY 205

Query: 133 EAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQKEHSDPEEK-TF 192
           E  DLVWYPVT ++GKP+FDGP+CI++I LK   ++LISKFFS K+ + +  D E K T 
Sbjct: 206 EKSDLVWYPVTSAIGKPTFDGPECIQQIPLKTSQNSLISKFFSTKQPKTDEGDKETKSTD 265

Query: 193 CNTSVKHEASPSLEE 207
            N  V  +  P+ E+
Sbjct: 266 ANIIVDLKKEPTAEK 280

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038896829.16.4e-13589.45abasic site processing protein YoqW isoform X1 [Benincasa hispida][more]
XP_038896830.12.3e-13288.73abasic site processing protein HMCES isoform X2 [Benincasa hispida][more]
XP_011659220.14.8e-13087.27uncharacterized protein LOC101206083 isoform X1 [Cucumis sativus] >KGN44679.1 hy... [more]
XP_011659221.11.7e-12786.55uncharacterized protein LOC101206083 isoform X2 [Cucumis sativus][more]
KAA0057630.17.1e-12684.48embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein isoform X2 ... [more]
Match NameE-valueIdentityDescription
Q6P7N44.8e-2434.52Abasic site processing protein HMCES OS=Xenopus tropicalis OX=8364 GN=hmces PE=2... [more]
O319161.1e-2337.84Abasic site processing protein YoqW OS=Bacillus subtilis (strain 168) OX=224308 ... [more]
O641311.1e-2337.84SOS response-associated protein yoqW OS=Bacillus phage SPbeta OX=66797 GN=yoqW P... [more]
Q6IND61.8e-2335.71Abasic site processing protein HMCES OS=Xenopus laevis OX=8355 GN=hmces PE=2 SV=... [more]
O349159.0e-2339.57Abasic site processing protein YobE OS=Bacillus subtilis (strain 168) OX=224308 ... [more]
Match NameE-valueIdentityDescription
A0A0A0K6X82.3e-13087.27Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G371760 PE=3 SV=1[more]
A0A5A7UR903.5e-12684.48Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein isoform X2 ... [more]
A0A6P4AC512.4e-8761.17uncharacterized protein LOC107426796 OS=Ziziphus jujuba OX=326968 GN=LOC10742679... [more]
A0A1S3C6L75.4e-8790.64putative SOS response-associated peptidase YobE isoform X1 OS=Cucumis melo OX=36... [more]
A0A6J1H9B14.6e-8690.64LOW QUALITY PROTEIN: uncharacterized protein LOC111461258 OS=Cucurbita moschata ... [more]
Match NameE-valueIdentityDescription
AT2G26470.14.8e-7264.62unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF159 ... [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036590SOS response associated peptidase-likeGENE3D3.90.1680.10coord: 6..167
e-value: 3.1E-60
score: 205.4
IPR036590SOS response associated peptidase-likeSUPERFAMILY143081BB1717-likecoord: 11..160
IPR003738SOS response associated peptidase (SRAP)PFAMPF02586SRAPcoord: 12..148
e-value: 6.1E-51
score: 173.1
IPR003738SOS response associated peptidase (SRAP)PANTHERPTHR13604DC12-RELATEDcoord: 13..187
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 273..287
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 233..272

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10022712.1HG10022712.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006974 cellular response to DNA damage stimulus
biological_process GO:0018142 protein-DNA covalent cross-linking
biological_process GO:0006508 proteolysis
molecular_function GO:0008233 peptidase activity
molecular_function GO:0003697 single-stranded DNA binding