HG10022712 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGCCTTATTATCTAGTATCTGCAATGTGCAGTTCAATGCTCGCTCAGAGTCCATATGTGAAAAGGCCTCTTTTCGGCGTCTAGTTCCTAAAAGAAGGTGCCTTGTGGCAGTGGAAGGGTATGTTTTTGGAGAACCTCGAACTTTTATATTTATATGAATGTGTGTTTGTGTTCATCATCTGTCTTTACTCTTGCACAAACACCCTTATATCCTTGGTTCTATGGTAGGTTTTATGAGTGGAAAAAGGATGGATCAAAAAAGCAGCCGTATTATATCCATTTTAAGGATGGGCAGCCACTTGTTCTTGCTGCTTTATATGATTGTTGGGAGAATTCTGAAGGTATGTTTCTTTATGATCAAGCAAAAGATGACTTTTCTTTCTTTTCTTCTTTTTTAGGGATCTTGCCCTAATACTTTGCTTTCACCGTATCAATTTTTTTTTACTTCCTCCATCAAAAAGATAAGTTTTTTTATTTTATTTTCTTGTACTAGTTTCAGTCGATGTACCGGTTTTTTTGAACTTCTGGACTGGATACTAATTTATTGAAGTTCTATTCAATATTTGGTAATTTAGATATCTGATATTATTGACCAGATATTCAATGTACATCCTAGGAAGACCTATAATGTTCTTGATTTATTATTGTTTTTGCAGGAGAATTACTTCACACTTTTACCATTCTTACAACTTCATCATCTCCAGCTTTGGAGTGGTTGCACGGTCAGTCCTATCTTTTCTTATGGCTGTTTTAGATCACGTTTACAATTGGATTTGAACATTGTTAGGGATGTGATGGGACTTCTTGTCAATCTCTGATGTGGTTGCAATAATTTCTATTTTCTAATTGAAAAGATCATAGTATTAATGCCAAATTGTACAAGAGTGAAATTAACCTGAGTCGTGGTTTGAGGATTATAAGGAATTCCTGCTAGCCTTGATTAAAAAAAAAAAACAGAAGAGTGTTAGGACGTAGGTGATAGATTTAAGTATCCTTGAGAAGCAATCATTAGAAGTACATCTATTTCTAGACTTCCAAACATCCCATAATATAGTAGCCATTTTATTTCTCTGCAACTTGTCACATCATATGAAAGGAAGAAGAATCGGACAAAGGAAATACTAAGAGCCGCCTACTTGAAGTTACTGTTAAAGGATATACCAAAACTCTCCCAAAATTTTTGGGTAAAGGGGCAATATATGAATAAATATTCGGGAAATATATGAATAAATATACTATGTTCTCTCCTTTTTGAAAATAACACACATATAGGCTAAGCCACGCTTCTGTGGAGCACATAATTTGTTTAGGTAAGAAACGGTTGTCCATTAGTATTAAAAGAAGTGAATACGATATCCACCCAATCAAGCCACCAGGCCTTATAAAAATTATTCCCGATTGGCATTAATTGATAAAATAATAAACTTTAGATGAGGGAGAATTTGATTGTTTAGTGGCTGATGGGTGATCTGTTTAGATAGGATGCCTGTAATTTTGGGTGACAAAGAACGGATGGATATGTGGTTGAATGATTCTTCATCGTCCAAGTATGATGCTGTCCTTAAACCATATGAGGCTCCTGATTTGGTAAGAACTTTTTGAAAGGAAAAAAGTGACTTATGTTAATAATTCATTAATGTTTAAAATGTAAATGTTAGGTATGGTACCCTGTAACTCCATCCATGGGCAAGCCTTCATTTGATGGGCCAGACTGCATCAAGGAGGTATCTCATCTTGCCCGTTCTTTTTTACTTGGTCGATAGCTTTCCCATCCTGGTTGAAGTTTAAAAGTTATAGCATGTTGCTGGAGAAAATTTGAGTTACATTATTCTCATAGATTATGTGATGATTTAGTTTCTTCAGGACCAATTTATCTGAGGTCATATTTGTTTATTCACGTTTCTCGCCTCCAGTGGAACACTTCACAGCTAGTTTGTTTGTTTGTTTGTTATTTTAAATTTTATTTTGTTTTCTGGTTTATCATGATTGAGGAACGTACATATTATGTATATAGATATGTACTGCCGTGGTGATTGAAGTAGTGGATATAATACATAGATCAAAGTTCATTTTAATGCCTTTGTTCGGGCTTTTGCAAGAAATTATTTCTGCAATGATGTGATTTCTTCTTGTTCTTGATATTAGATAAAATGTTTGTGCGCCAAAGTGACGATTGAGTTTGTTGATAGGGAATGTTCCTGCTCTGATGTGAATATGACGAATGTTGTTTAGTTGATAGGATACATGAAATGGAGTCGTTTGAGAGACAATCTTTGGGCTAAAGACAAAATGTTCTACGGAATGTTCAAATAGCATTATGTTGTTTTCAATTCTGTTTTGGAATAAGATGAAAATGATTGGAATTTATATTTTATTTGTATACTAATTTGTTTGTTTAGACTTGCACGTGTCTTCTTCTTCTGGTGTAGTGACACTTGTAATTTGCTTAATCAATAATGAAAATAACTAGGATTTATGTTCACGTTGAATTCTTGAGTGTAGGCTTACACATTCACCATGGTGATGTGGGATGGGTATTAGAACTTTGACCTTAAGGAAGGTTATAATATCCTTTGTCATTGTGAGACCAGAGAATCATACTCATACTCTACATTAGAGTTCAATATATATAGGCATAAAGTCAAGCTAATAAGCTTCTAAATTTACACATGCTATAACATTTTTAGCTACTGAGCTATGCTGAAATTGGTCACTGTCATTTGTTAGGAAAAAACTGACGATTTTTTTTTATGGGCTTTCATATTTTGGTTAAATGAACACAAAACTCTCTCAAACATCTGTTTTTTTATCTTTTAGGAAATTTGATTAGTAACTTCATTTTCTAAAATATTTGAAAACATGTATTTTGTAGAAGTTATAACGATTTTAGTGTTCTTTAAAAATGATTGCGAATGTAGCATTAATCAATATGCTTTTATTTCACATGATAGTCATAGTCCTCGTTGATTTACATTAACGATTAACCTAATATAGATCAACAAGTAACATTGTTATGTCTTCTTCTGTAGATACAGCTAAAGAATGATGGAAGCAACCTCATCTCCAAATTTTTCTCTGCAAAAGAAATTCAAAAGGAACATTCAGACCCAGAAGAGAAAACTTTCTGTAACACATCTGTGAAGCATGAGGCATCGCCAAGTCTAGAAGAACATAAAAGAGATGTAAATCTTGAAGCTTCATTCGAAGAATCAAAGGATTTTCTTGCAAAGCGTTCATCTGATACTGCACCAACATGTCAAATAAAACGGGACCGTGAAGACATCTCATCTGAGTCCAAAAGTGGCATGGATGACGACAGTAAGGTAGGCAGCAATCCAAAGATAAGGAAGAAGGGAAGCCTAAAGAGTGGCAAGGACAACCAATCAACCCTCCTTTCATACTTTGGGAGGAAATAG ATGTTTGCCTTATTATCTAGTATCTGCAATGTGCAGTTCAATGCTCGCTCAGAGTCCATATGTGAAAAGGCCTCTTTTCGGCGTCTAGTTCCTAAAAGAAGGTGCCTTGTGGCAGTGGAAGGGTTTTATGAGTGGAAAAAGGATGGATCAAAAAAGCAGCCGTATTATATCCATTTTAAGGATGGGCAGCCACTTGTTCTTGCTGCTTTATATGATTGTTGGGAGAATTCTGAAGGAGAATTACTTCACACTTTTACCATTCTTACAACTTCATCATCTCCAGCTTTGGAGTGGTTGCACGATAGGATGCCTGTAATTTTGGGTGACAAAGAACGGATGGATATGTGGTTGAATGATTCTTCATCGTCCAAGTATGATGCTGTCCTTAAACCATATGAGGCTCCTGATTTGGTATGGTACCCTGTAACTCCATCCATGGGCAAGCCTTCATTTGATGGGCCAGACTGCATCAAGGAGATACAGCTAAAGAATGATGGAAGCAACCTCATCTCCAAATTTTTCTCTGCAAAAGAAATTCAAAAGGAACATTCAGACCCAGAAGAGAAAACTTTCTGTAACACATCTGTGAAGCATGAGGCATCGCCAAGTCTAGAAGAACATAAAAGAGATGTAAATCTTGAAGCTTCATTCGAAGAATCAAAGGATTTTCTTGCAAAGCGTTCATCTGATACTGCACCAACATGTCAAATAAAACGGGACCGTGAAGACATCTCATCTGAGTCCAAAAGTGGCATGGATGACGACAGTAAGGTAGGCAGCAATCCAAAGATAAGGAAGAAGGGAAGCCTAAAGAGTGGCAAGGACAACCAATCAACCCTCCTTTCATACTTTGGGAGGAAATAG ATGTTTGCCTTATTATCTAGTATCTGCAATGTGCAGTTCAATGCTCGCTCAGAGTCCATATGTGAAAAGGCCTCTTTTCGGCGTCTAGTTCCTAAAAGAAGGTGCCTTGTGGCAGTGGAAGGGTTTTATGAGTGGAAAAAGGATGGATCAAAAAAGCAGCCGTATTATATCCATTTTAAGGATGGGCAGCCACTTGTTCTTGCTGCTTTATATGATTGTTGGGAGAATTCTGAAGGAGAATTACTTCACACTTTTACCATTCTTACAACTTCATCATCTCCAGCTTTGGAGTGGTTGCACGATAGGATGCCTGTAATTTTGGGTGACAAAGAACGGATGGATATGTGGTTGAATGATTCTTCATCGTCCAAGTATGATGCTGTCCTTAAACCATATGAGGCTCCTGATTTGGTATGGTACCCTGTAACTCCATCCATGGGCAAGCCTTCATTTGATGGGCCAGACTGCATCAAGGAGATACAGCTAAAGAATGATGGAAGCAACCTCATCTCCAAATTTTTCTCTGCAAAAGAAATTCAAAAGGAACATTCAGACCCAGAAGAGAAAACTTTCTGTAACACATCTGTGAAGCATGAGGCATCGCCAAGTCTAGAAGAACATAAAAGAGATGTAAATCTTGAAGCTTCATTCGAAGAATCAAAGGATTTTCTTGCAAAGCGTTCATCTGATACTGCACCAACATGTCAAATAAAACGGGACCGTGAAGACATCTCATCTGAGTCCAAAAGTGGCATGGATGACGACAGTAAGGTAGGCAGCAATCCAAAGATAAGGAAGAAGGGAAGCCTAAAGAGTGGCAAGGACAACCAATCAACCCTCCTTTCATACTTTGGGAGGAAATAG MFALLSSICNVQFNARSESICEKASFRRLVPKRRCLVAVEGFYEWKKDGSKKQPYYIHFKDGQPLVLAALYDCWENSEGELLHTFTILTTSSSPALEWLHDRMPVILGDKERMDMWLNDSSSSKYDAVLKPYEAPDLVWYPVTPSMGKPSFDGPDCIKEIQLKNDGSNLISKFFSAKEIQKEHSDPEEKTFCNTSVKHEASPSLEEHKRDVNLEASFEESKDFLAKRSSDTAPTCQIKRDREDISSESKSGMDDDSKVGSNPKIRKKGSLKSGKDNQSTLLSYFGRK Homology
BLAST of HG10022712 vs. NCBI nr
Match: XP_038896829.1 (abasic site processing protein YoqW isoform X1 [Benincasa hispida]) HSP 1 Score: 491.1 bits (1263), Expect = 6.4e-135 Identity = 246/275 (89.45%), Postives = 256/275 (93.09%), Query Frame = 0
BLAST of HG10022712 vs. NCBI nr
Match: XP_038896830.1 (abasic site processing protein HMCES isoform X2 [Benincasa hispida]) HSP 1 Score: 482.6 bits (1241), Expect = 2.3e-132 Identity = 244/275 (88.73%), Postives = 254/275 (92.36%), Query Frame = 0
BLAST of HG10022712 vs. NCBI nr
Match: XP_011659220.1 (uncharacterized protein LOC101206083 isoform X1 [Cucumis sativus] >KGN44679.1 hypothetical protein Csa_015996 [Cucumis sativus]) HSP 1 Score: 474.9 bits (1221), Expect = 4.8e-130 Identity = 240/275 (87.27%), Postives = 253/275 (92.00%), Query Frame = 0
BLAST of HG10022712 vs. NCBI nr
Match: XP_011659221.1 (uncharacterized protein LOC101206083 isoform X2 [Cucumis sativus]) HSP 1 Score: 466.5 bits (1199), Expect = 1.7e-127 Identity = 238/275 (86.55%), Postives = 251/275 (91.27%), Query Frame = 0
BLAST of HG10022712 vs. NCBI nr
Match: KAA0057630.1 (embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 461.1 bits (1185), Expect = 7.1e-126 Identity = 234/277 (84.48%), Postives = 249/277 (89.89%), Query Frame = 0
BLAST of HG10022712 vs. ExPASy Swiss-Prot
Match: Q6P7N4 (Abasic site processing protein HMCES OS=Xenopus tropicalis OX=8364 GN=hmces PE=2 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 4.8e-24 Identity = 58/168 (34.52%), Postives = 95/168 (56.55%), Query Frame = 0
BLAST of HG10022712 vs. ExPASy Swiss-Prot
Match: O31916 (Abasic site processing protein YoqW OS=Bacillus subtilis (strain 168) OX=224308 GN=yoqW PE=3 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.1e-23 Identity = 56/148 (37.84%), Postives = 86/148 (58.11%), Query Frame = 0
BLAST of HG10022712 vs. ExPASy Swiss-Prot
Match: O64131 (SOS response-associated protein yoqW OS=Bacillus phage SPbeta OX=66797 GN=yoqW PE=3 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 1.1e-23 Identity = 56/148 (37.84%), Postives = 86/148 (58.11%), Query Frame = 0
BLAST of HG10022712 vs. ExPASy Swiss-Prot
Match: Q6IND6 (Abasic site processing protein HMCES OS=Xenopus laevis OX=8355 GN=hmces PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.8e-23 Identity = 60/168 (35.71%), Postives = 93/168 (55.36%), Query Frame = 0
BLAST of HG10022712 vs. ExPASy Swiss-Prot
Match: O34915 (Abasic site processing protein YobE OS=Bacillus subtilis (strain 168) OX=224308 GN=yobE PE=3 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 9.0e-23 Identity = 55/139 (39.57%), Postives = 81/139 (58.27%), Query Frame = 0
BLAST of HG10022712 vs. ExPASy TrEMBL
Match: A0A0A0K6X8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G371760 PE=3 SV=1) HSP 1 Score: 474.9 bits (1221), Expect = 2.3e-130 Identity = 240/275 (87.27%), Postives = 253/275 (92.00%), Query Frame = 0
BLAST of HG10022712 vs. ExPASy TrEMBL
Match: A0A5A7UR90 (Embryonic stem cell-specific 5-hydroxymethylcytosine-binding protein isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold9829G00070 PE=3 SV=1) HSP 1 Score: 461.1 bits (1185), Expect = 3.5e-126 Identity = 234/277 (84.48%), Postives = 249/277 (89.89%), Query Frame = 0
BLAST of HG10022712 vs. ExPASy TrEMBL
Match: A0A6P4AC51 (uncharacterized protein LOC107426796 OS=Ziziphus jujuba OX=326968 GN=LOC107426796 PE=3 SV=1) HSP 1 Score: 332.0 bits (850), Expect = 2.4e-87 Identity = 178/291 (61.17%), Postives = 215/291 (73.88%), Query Frame = 0
BLAST of HG10022712 vs. ExPASy TrEMBL
Match: A0A1S3C6L7 (putative SOS response-associated peptidase YobE isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497636 PE=3 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 5.4e-87 Identity = 155/171 (90.64%), Postives = 161/171 (94.15%), Query Frame = 0
BLAST of HG10022712 vs. ExPASy TrEMBL
Match: A0A6J1H9B1 (LOW QUALITY PROTEIN: uncharacterized protein LOC111461258 OS=Cucurbita moschata OX=3662 GN=LOC111461258 PE=3 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 4.6e-86 Identity = 155/171 (90.64%), Postives = 161/171 (94.15%), Query Frame = 0
BLAST of HG10022712 vs. TAIR 10
Match: AT2G26470.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF159 (InterPro:IPR003738); Has 3646 Blast hits to 3636 proteins in 1001 species: Archae - 41; Bacteria - 1922; Metazoa - 142; Fungi - 125; Plants - 44; Viruses - 14; Other Eukaryotes - 1358 (source: NCBI BLink). ) HSP 1 Score: 268.9 bits (686), Expect = 4.8e-72 Identity = 126/195 (64.62%), Postives = 157/195 (80.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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