HG10022547 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGTTGATATGATATCTAGTTTAAGCAAAGCCGCTCTATCTGGCATCAATATCAACCACAATGAAATTGTTCATGAAGCTGGATTCCTTGTTTGTTTGGTTGATAGCCTTCCCCTTGATTATCTTGGAATGCCCCTTGGAGATGATCTCAGTTCCTTCTCATTTTGGAATACAATGATAGAAAGAATCTCTTGA ATGTTTGTTGATATGATATCTAGTTTAAGCAAAGCCGCTCTATCTGGCATCAATATCAACCACAATGAAATTGTTCATGAAGCTGGATTCCTTGTTTGTTTGGTTGATAGCCTTCCCCTTGATTATCTTGGAATGCCCCTTGGAGATGATCTCAGTTCCTTCTCATTTTGGAATACAATGATAGAAAGAATCTCTTGA ATGTTTGTTGATATGATATCTAGTTTAAGCAAAGCCGCTCTATCTGGCATCAATATCAACCACAATGAAATTGTTCATGAAGCTGGATTCCTTGTTTGTTTGGTTGATAGCCTTCCCCTTGATTATCTTGGAATGCCCCTTGGAGATGATCTCAGTTCCTTCTCATTTTGGAATACAATGATAGAAAGAATCTCTTGA MFVDMISSLSKAALSGININHNEIVHEAGFLVCLVDSLPLDYLGMPLGDDLSSFSFWNTMIERIS Homology
BLAST of HG10022547 vs. NCBI nr
Match: CAN74466.1 (hypothetical protein VITISV_042969 [Vitis vinifera]) HSP 1 Score: 58.5 bits (140), Expect = 2.4e-05 Identity = 26/58 (44.83%), Postives = 40/58 (68.97%), Query Frame = 0
BLAST of HG10022547 vs. NCBI nr
Match: RVW80770.1 (putative ribonuclease H protein [Vitis vinifera]) HSP 1 Score: 58.2 bits (139), Expect = 3.2e-05 Identity = 26/58 (44.83%), Postives = 40/58 (68.97%), Query Frame = 0
BLAST of HG10022547 vs. NCBI nr
Match: XP_010255174.1 (PREDICTED: uncharacterized protein LOC104595909 [Nelumbo nucifera]) HSP 1 Score: 57.8 bits (138), Expect = 4.1e-05 Identity = 23/56 (41.07%), Postives = 36/56 (64.29%), Query Frame = 0
BLAST of HG10022547 vs. NCBI nr
Match: RVW96880.1 (Transposon TX1 uncharacterized 149 kDa protein [Vitis vinifera]) HSP 1 Score: 57.0 bits (136), Expect = 7.0e-05 Identity = 23/57 (40.35%), Postives = 37/57 (64.91%), Query Frame = 0
BLAST of HG10022547 vs. NCBI nr
Match: RVW35026.1 (hypothetical protein CK203_079805 [Vitis vinifera]) HSP 1 Score: 56.6 bits (135), Expect = 9.2e-05 Identity = 25/58 (43.10%), Postives = 38/58 (65.52%), Query Frame = 0
BLAST of HG10022547 vs. ExPASy TrEMBL
Match: A5BE85 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_042969 PE=4 SV=1) HSP 1 Score: 58.5 bits (140), Expect = 1.2e-05 Identity = 26/58 (44.83%), Postives = 40/58 (68.97%), Query Frame = 0
BLAST of HG10022547 vs. ExPASy TrEMBL
Match: A0A438H891 (Putative ribonuclease H protein OS=Vitis vinifera OX=29760 GN=VvCHDp000001_781 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.5e-05 Identity = 26/58 (44.83%), Postives = 40/58 (68.97%), Query Frame = 0
BLAST of HG10022547 vs. ExPASy TrEMBL
Match: A0A1U7ZSX8 (uncharacterized protein LOC104595909 OS=Nelumbo nucifera OX=4432 GN=LOC104595909 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.0e-05 Identity = 23/56 (41.07%), Postives = 36/56 (64.29%), Query Frame = 0
BLAST of HG10022547 vs. ExPASy TrEMBL
Match: A0A438IJL2 (Transposon TX1 uncharacterized 149 kDa protein OS=Vitis vinifera OX=29760 GN=YTX2_695 PE=4 SV=1) HSP 1 Score: 57.0 bits (136), Expect = 3.4e-05 Identity = 23/57 (40.35%), Postives = 37/57 (64.91%), Query Frame = 0
BLAST of HG10022547 vs. ExPASy TrEMBL
Match: A0A438DI46 (Reverse transcriptase domain-containing protein OS=Vitis vinifera OX=29760 GN=CK203_079805 PE=4 SV=1) HSP 1 Score: 56.6 bits (135), Expect = 4.4e-05 Identity = 25/58 (43.10%), Postives = 38/58 (65.52%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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