HG10022546 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGGATGTCCTCTTGGCTATAGAAGGATTTGAGGATGGCAGTGATCTTAAGGACATTTTTTCTAGTGACATAAATGGTGGTGGGCTTGCCCTAGCCAACCTCAAAGATTGGCATATAGTCCTTATCAGTTATCACCAAATGGGTCCGGATTCCCCCATGAAAGAGAGTCTATATAGCCATCATTACTGGTAAATCTTGGATTACCCCATGAAAGAGAGTCTATATAGCCTATCATTACTGGTAAGTCTCATGAAAGAGAGTCTATATAGCCTATCATTACCGGTAAATCTGTACGTGCGGAAACTTCAAAGAAACAGCCCTTGAAAATTTGGTGTTAAATGCAAGTCTCTCTTACAGTTTTATTTGGTTTCAAGATTAGCAGTAGCCATCATATTAGCTTCTAGGGAATGACACTTTTTCCTTCTATTTCCCTGCTTTAAGGTAAGAATTCAGAGGTTTGCAATCATCTCTTTCTACCCTGTCAAATTACTCAGTCTTTCGCTTTCCTCTTACCACAATTCAACTTGAATTGGTATCATCCATGTTCCACAGCTCATGCCACTGAGCAGGTCCTTTTGGGCCACCTCTTCTGAAGCAAGGCAAAGGTTCTTGGAAGTGTCTAGTTTCAAGGTGTTTCGTTGGAAACTTAGCTTAGAAAAAGCCACAAAATCTTTCAAGGAAAAATTTGCAACTTTATGAAATTTGGTAGATTAGTTACTCAACATTTTTACTTGGTGTGCTTTTCTATTACTCTCTTTTGTAATTTAAGTCTTTTTATTATTGCCACTGAAAGGAATTTTCTGTATTCTCTTCGACTTATTTGGGTTGATTTCTTGTCATATGCTTTTGTATCTCTTTTCTCTCGTCATTCTCGACCAAATATAATATGACCATTCCAATTATATACCTGTCAGTATGATAGTTCTGTTGGCTGTTGTACAATATTCATCTGCATCAATACATTAGAAATGGAATCTTTCAATCGACTGCATCTACAATTAGATTTTCTTTGACTCAGATTCCCTCCGTAAACGTATTTTCGGGGTTAAAAAAGAGTACGTTCCCACATTTCTTTTCTTATAGTTCCTACTTGGAGTATAATTAACTACTTTATTATCCTAAGATAATTTCATCCCTTCCGTAAAATATAGGTGGCATGCTGTTGCATCATGGACTTGGAATGCCCAAGACGAAACTTGTGGAATCTGTAGGATGGCCTTTGATGGTTGTTGCCCTGATTGCAAGCTCCCTGGGGATGATTGTCCATTGAGTGAGTCAACTAGCCTTGTCATATCCTCAAACTTTTTCTCCTGCTATCAATCATTGCAACTCACAGTTGATTCTTGA ATGAGGGATGTCCTCTTGGCTATAGAAGGATTTGAGGATGGCAGTGATCTTAAGGACATTTTTTCTAGTGACATAAATGGTGGTGGGCTTGCCCTAGCCAACCTCAAAGATTGGCATATAGTCCTTATCAGTTATCACCAAATGGGTCCGGATTCCCCCATGAAAGAGAGTCTATATAGCCATCATTACTGGTGGCATGCTGTTGCATCATGGACTTGGAATGCCCAAGACGAAACTTGTGGAATCTGTAGGATGGCCTTTGATGGTTGTTGCCCTGATTGCAAGCTCCCTGGGGATGATTGTCCATTGAGTGAGTCAACTAGCCTTGTCATATCCTCAAACTTTTTCTCCTGCTATCAATCATTGCAACTCACAGTTGATTCTTGA ATGAGGGATGTCCTCTTGGCTATAGAAGGATTTGAGGATGGCAGTGATCTTAAGGACATTTTTTCTAGTGACATAAATGGTGGTGGGCTTGCCCTAGCCAACCTCAAAGATTGGCATATAGTCCTTATCAGTTATCACCAAATGGGTCCGGATTCCCCCATGAAAGAGAGTCTATATAGCCATCATTACTGGTGGCATGCTGTTGCATCATGGACTTGGAATGCCCAAGACGAAACTTGTGGAATCTGTAGGATGGCCTTTGATGGTTGTTGCCCTGATTGCAAGCTCCCTGGGGATGATTGTCCATTGAGTGAGTCAACTAGCCTTGTCATATCCTCAAACTTTTTCTCCTGCTATCAATCATTGCAACTCACAGTTGATTCTTGA MRDVLLAIEGFEDGSDLKDIFSSDINGGGLALANLKDWHIVLISYHQMGPDSPMKESLYSHHYWWHAVASWTWNAQDETCGICRMAFDGCCPDCKLPGDDCPLSESTSLVISSNFFSCYQSLQLTVDS Homology
BLAST of HG10022546 vs. NCBI nr
Match: KGN44481.1 (hypothetical protein Csa_016037 [Cucumis sativus]) HSP 1 Score: 109.4 bits (272), Expect = 2.4e-20 Identity = 63/140 (45.00%), Postives = 65/140 (46.43%), Query Frame = 0
BLAST of HG10022546 vs. NCBI nr
Match: XP_035547557.1 (anaphase-promoting complex subunit 11 isoform X7 [Juglans regia] >XP_035547558.1 anaphase-promoting complex subunit 11 isoform X7 [Juglans regia] >XP_035547559.1 anaphase-promoting complex subunit 11 isoform X7 [Juglans regia] >XP_035547674.1 anaphase-promoting complex subunit 11 isoform X7 [Juglans regia] >XP_035547675.1 anaphase-promoting complex subunit 11 isoform X7 [Juglans regia] >XP_035547676.1 anaphase-promoting complex subunit 11 isoform X7 [Juglans regia] >XP_040994217.1 anaphase-promoting complex subunit 11 isoform X8 [Juglans microcarpa x Juglans regia] >XP_040994221.1 anaphase-promoting complex subunit 11 isoform X8 [Juglans microcarpa x Juglans regia]) HSP 1 Score: 103.6 bits (257), Expect = 1.3e-18 Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 0
BLAST of HG10022546 vs. NCBI nr
Match: KAF5463602.1 (hypothetical protein F2P56_013763 [Juglans regia] >KAF5464091.1 hypothetical protein F2P56_014198 [Juglans regia]) HSP 1 Score: 103.6 bits (257), Expect = 1.3e-18 Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 0
BLAST of HG10022546 vs. NCBI nr
Match: XP_024926117.1 (anaphase-promoting complex subunit 11-like isoform X1 [Ziziphus jujuba]) HSP 1 Score: 103.2 bits (256), Expect = 1.7e-18 Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0
BLAST of HG10022546 vs. NCBI nr
Match: KAG6742543.1 (hypothetical protein POTOM_053415 [Populus tomentosa]) HSP 1 Score: 103.2 bits (256), Expect = 1.7e-18 Identity = 41/49 (83.67%), Postives = 45/49 (91.84%), Query Frame = 0
BLAST of HG10022546 vs. ExPASy Swiss-Prot
Match: Q9M9L0 (Anaphase-promoting complex subunit 11 OS=Arabidopsis thaliana OX=3702 GN=APC11 PE=1 SV=3) HSP 1 Score: 97.4 bits (241), Expect = 1.2e-19 Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 0
BLAST of HG10022546 vs. ExPASy Swiss-Prot
Match: Q3ZCF6 (Anaphase-promoting complex subunit 11 OS=Bos taurus OX=9913 GN=ANAPC11 PE=3 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 9.0e-15 Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0
BLAST of HG10022546 vs. ExPASy Swiss-Prot
Match: Q9NYG5 (Anaphase-promoting complex subunit 11 OS=Homo sapiens OX=9606 GN=ANAPC11 PE=1 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 9.0e-15 Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0
BLAST of HG10022546 vs. ExPASy Swiss-Prot
Match: Q9CPX9 (Anaphase-promoting complex subunit 11 OS=Mus musculus OX=10090 GN=Anapc11 PE=3 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 9.0e-15 Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0
BLAST of HG10022546 vs. ExPASy Swiss-Prot
Match: Q5R8A2 (Anaphase-promoting complex subunit 11 OS=Pongo abelii OX=9601 GN=ANAPC11 PE=3 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 9.0e-15 Identity = 30/39 (76.92%), Postives = 34/39 (87.18%), Query Frame = 0
BLAST of HG10022546 vs. ExPASy TrEMBL
Match: A0A0A0K9J6 (Anaphase-promoting complex subunit 11 OS=Cucumis sativus OX=3659 GN=Csa_7G306890 PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 1.1e-20 Identity = 63/140 (45.00%), Postives = 65/140 (46.43%), Query Frame = 0
BLAST of HG10022546 vs. ExPASy TrEMBL
Match: A0A2I4HDN9 (Anaphase-promoting complex subunit 11 OS=Juglans regia OX=51240 GN=LOC109016305 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 6.2e-19 Identity = 41/44 (93.18%), Postives = 42/44 (95.45%), Query Frame = 0
BLAST of HG10022546 vs. ExPASy TrEMBL
Match: A0A6P6FVS8 (Anaphase-promoting complex subunit 11 OS=Ziziphus jujuba OX=326968 GN=LOC107411661 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 8.2e-19 Identity = 40/40 (100.00%), Postives = 40/40 (100.00%), Query Frame = 0
BLAST of HG10022546 vs. ExPASy TrEMBL
Match: A0A1R3KV27 (Anaphase-promoting complex subunit 11 OS=Corchorus olitorius OX=93759 GN=COLO4_04114 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 1.4e-18 Identity = 44/65 (67.69%), Postives = 49/65 (75.38%), Query Frame = 0
BLAST of HG10022546 vs. ExPASy TrEMBL
Match: A0A540MMN6 (zf-ANAPC11 domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_014304 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 1.4e-18 Identity = 45/60 (75.00%), Postives = 50/60 (83.33%), Query Frame = 0
BLAST of HG10022546 vs. TAIR 10
Match: AT3G05870.1 (anaphase-promoting complex/cyclosome 11 ) HSP 1 Score: 97.4 bits (241), Expect = 8.6e-21 Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 0
BLAST of HG10022546 vs. TAIR 10
Match: AT3G05870.2 (anaphase-promoting complex/cyclosome 11 ) HSP 1 Score: 97.4 bits (241), Expect = 8.6e-21 Identity = 38/39 (97.44%), Postives = 39/39 (100.00%), Query Frame = 0
BLAST of HG10022546 vs. TAIR 10
Match: AT5G26640.1 (BEST Arabidopsis thaliana protein match is: anaphase-promoting complex/cyclosome 11 (TAIR:AT3G05870.2); Has 293 Blast hits to 293 proteins in 137 species: Archae - 0; Bacteria - 0; Metazoa - 128; Fungi - 102; Plants - 41; Viruses - 0; Other Eukaryotes - 22 (source: NCBI BLink). ) HSP 1 Score: 70.1 bits (170), Expect = 1.5e-12 Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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