HG10022507 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10022507
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	40S ribosomal protein S4
Location	Chr05: 24942395 .. 24948151 (-)
RNA-Seq Expression	HG10022507
Synteny	HG10022507

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTGAAGACGATTTCAGTTTCCCCACCGCCTTAGAGCCTTTCAGCCGTGGCGGGATCGATTCGCCGCCGCTCTGGCATCTCTCTCCGGTCGCATCCCCGATTTCCTACCGTCAACAAACAGCCTGCGATTGGAATTTCAGAGACACGGGGGTGGACGGTGGGAAGAGCGATCGGTTACCGTCGGGGAGATTTACGGCGTCGTTGCAGAGGAGGAGAAGATTTTCGAGCGATGCGGAGGAGGAGGAGGTGGCAGCGGCGGAGAAGATGGACGTGCTTTGGGAGAATTTCAACGAGGAGTTGTCGAGGAGTCGGAGATCCAGGTTGATGAAATCGGCGGAATTGGAGGAGATTGAGGTTGTGAAGACGCGGCGGCGGATGGGGGAATTAAATCTATCGGAGACGTCCGGCGCGGTGGCGACGACGAGGAAGGCGACGGGGAAGACGGCGTTTGTTAAGGTTTTGAAGAAGCTTTTCTTGATGCATAACAACAATTCCCGCCGGAATCTGCAAACTCAAACACGGTGATAACTAAAATACGGAGGATTTTTTTTTCTTTGGGCAAAGAAAATGTATAAATTAATAACAATTAATTACATGGTTTTTTCTTTCCCTTCTAACATTGGAAATATTTCAAAATTTTCACTCCAAATTATTGTTCTTCATTTCTTGTAAAAGGGGTAAATGTTCACATGAACATTTGATATTTTGTATGAATTGGGGCGGTTCTATAATTTATGTTTTTGCTAGGTAGATTTAGAAAAGTGAAATTACAATAAATATAAAAAAAAATATCAAACTATTTACAAATATAAAAAAAGTTCATTGTAGATTGCGATAGAATTCTAGATAGATTTTGTTGTCTCATACAATAGAATTCTATCGCGTCTATCCCCGATAAAAATGACATTTTCCTATATTTGTAAATAAGTTACTCATTTTTCCATATTTGAAAATAGTTCTTTAGAAAAGATATAATAATTTCATAATTGTTAAAATAACATTTTGGTACTTAAAGGTTTTGTTACAAATATAGCATAATTTCTAATGTATATAAAAATGAATAAATAAAGTCTAGTAACCCTTTAGGCCTTCTTTTATCACTATTCAATTTTTATGGTTTTGTTTGATAACTATTTGATTTTTGGTTATTAGATTTTAAAATTAAGGTCTTGTTTTATAATTTTTCCATTTTTTATATTTGGTTTTTTGAAAATGAAGTATAATTTTCTTCCCCTAGTTTGCATCTTTTTAAGTACGATAGTTAATTATTAGCCCAATTCTAAAAACAAAAGCAAGTTTTTAAAAACTATTTTTTTAGTTTTTAAAATTTGGCTTGATTTTTTAAAACATTGGTAAAAAGTAGAAAAGAAAGTCAGACATATAGGGGTAAGAAGAGTGCTTGTAGGCCCAAATTTCAAGAATTAAAAACAAAAAACCAAATAGTTATCAAATGACCCAAGTCATTCAATTTTAACTCTAAATTTATTGATTTGTTCTCTACTTTTTACTGCCAAAAGTTGAAAACTAAGGAAAAGTAGTTTTTAAAAAACCTGTTTTGGTTTTACATAGTAAAGAATCGAGAGAAAATACACTTTATTTTCAAAAATAAAAAACAAAAAGTAAAATAGTTAACAAATAGAGAGCCTAATTTATCCTTAACAAACTACTAACTATACACCTTATTGATATTTTTAGGAGCGTTTTTCAAAATCCAAACTGAAATTTAAAAACTTAGAAAAATAGATGTTAAAACTCTCTTTTAACAAAAAAAATGGTTAACAATTCATGTTTCCTTAGTAAAAATGAAAGTTATCTGAGAAAATGTGAGAATATAAACCTAAAATTTTAAAATGAAACAAAACTCAAATTTCAAGAATAATATTGTAACATTGTGAAACGAGAGACTAAATTAAAACTAGACTCAAACTTAAGTATTAATTGTGTGACATTTTAAAACTTAAAAGACCAAATAGGAATTAGACTTTGTATTTTTTTCCTAGGATTGTTTTTAAATATAGCAAAATGAACCAAAATATTTACAAATATAGCAAATTGTAAATGTCCATTAGTGATAGACATTCAAATAAATATTATTAATAAATATAGCAAAAATATTAGTTTTGCCATTTAAATTAATTTCCCCATAGTTTTAGACTTTTAGTATATGACATTATTTAAAAAATAAAGGTTAAATTATAAGAAATGCCCCTTAACTATGACATTTGTGTCAAAAATGTCCCTGAACTTTCAAAAGTTTCAAAAATATCCCTAAACTTTCAAAAAGAGTTCAAAAATACCTCTACCGTTAGTTTTGGATGGAAACCGTTAAAGTTTTGTTTAAAAAATACCCCTGAACTTTTTAAAAGTTTCAAAAATACCCTTAACTAAAAAAAAGTTCAAAAATACCTTTGCCGTAAGTATATGAATACAAACCATTAATATCTCGTTTAAAAAATAACTTTAAAATTAAAAAAAAAAATTATAATTGCTCCTAACATTGATATAGTGATCAATTTGTTTGAAGTTTTATTATATTTTAAAATAATGAATTTTAAAACAAATTATATGTATTCTCATTTTTTTTCATATAGATACTCTTATTTTCTCTTAATTTTTCAATTCTTAAGTTACACTAATTTTCTCACCAACCAAAATTTTAAGTTAAAACATAAAATCTCATAAAATCTCACAAAATTCTAAAATCAAAATCTCCCCTTAAACATACCAAAACGATAAAAAAAAAACGTTAGTAGTTGGGTGTGTATTAATAACCGAACACCTTTCTTTATTTGACTATTTCTCCTTTTGATATGTTTAAGGGAAGATTTTGATTTTAGAATTTTGTGAGATTTTATGTTTTAACTTAAAAAAATTAGTGTAGGGTGAAAATTAAAAAATTAAGAAGAAAATGAGAATATATATATGGAAAAAATAAAGACACTTTTATAATTTGTTTTAAAGTTTATTTTTTTCGAACTTACGAAAACTTCCAACAAATTGATGAGCAATTTTAAACCCTTTTTTAATTTCAAAGTTATTTTTGGAACGGGATATTAACGTTGATGTTCACAAACTTACGGTGAAGGTATTTTTTAACTTTTTTTAGTTAAGGGTATTTTTGAAACTTTTGAAAAGTTCAGGGGTATTTTTGAAACAAAACTTTAACGGTTTCCATCTAAAACTAACGGCATGAGTATTTTTGAACTATTTTTGAAAGTTCATGTATATTTTTGACACAAATTGCATAGTTGATGGGCATTTTTTTAATAATTTAACCAAAAATAAATTAGTATATGACATAATAATAGTGAACCACGTGTGAGGCACGTGTTTGAGAATTACTTAAATAGAAAAATTCCTCTCCTCCACTCCCTCTCCGAGAGAACCCTAGCTGCCGACTCCAGTTTAGCTGCCGACTCCAGTTTAGCTCGAAAATATGGTCAGTGATCTCTTTTTTAACTCTTTCTTCCTTTCTTTCATTTGTGCATTCTGTTTTTCTTTCTATCCTTGTAGAATTTTAGACTTCTGTATCTGTTTTGGGTATTTTGTTCGTCTTCAGATGGATCACTCTGTGATGTGATTACGCCTTCGTTTTGTTATTTTTCTGAGACAATTTGATGGGCACAACAATGTGAACATTTTCATCAATGGGTTTCATTCTATTTAAGTAATAATTGATGTATGTGTTCTTGTATGGGACTCTATGGGACTGTATTCTTCACGCAAGATGAGTATATATGTGTGACGTTATAGTTTTTGGATGATGTTCATCAGCACAGTTTTGTCCACTGTTATTTATTTTTCCTTATGATCTCTGGATTTCTGAGTACATGATTGTGTTTTGGTGTTCTAAATAGGATACATTTTTCTTTGAAATTAATGCTTATGGCTATGACAGGCAAGGGGACTGAAGAAGCATTTAAAGAGGCTCAATGCTCCGAAGCATTGGATGCTTGACAAACTTGGTGGTGCATTTGTGAGTCAAATTTTGTAGTTTTGTTTATTTTGCTTTTCCTCTCGAGTTTATGCATCACACTTATTTCTGACAGTTAGTTCTACCTCTCAAATCACTTTGTAGGCCCCCAAACCTTCATCTGGACCCCATAAGTCAAGGGAATGCCTCCCATTGATCCTTATATTGAGGAACCGACTGAAATATGCTCTCACATATCGTGAGGTAATTGCAATTTTAATGCAACGACATGTTTTGGTTGATGGGAAGGTCAGGACAGACAAGACTTTCCCTGCTGGTTTCATGGGTATGTTTTTCTTAAACTTTGTAACTATACTATTGTTTGAGTTCCTATATTTACTGACCTTTTTACATAAGTACCACTATAGGTGTTGTTGGAATAGCTTGCTAAATTAGTTTTTTTATTCCTGGAATTGGCTGTTGATTTATGAACTGAATTAGAGAAGTAATGGAGTGTTTACTCATCATTTCAATCCTTCCATATTGATATTGTCTTCCTTTGGTAATAATGCTCCCCCTACCCTTTATGCTATGACTAATGGCTGGTGGGGTCCTTATTGTAAGTTGTATATTATGTATTTTTTTCCGATGAGTGTTAGTTCTACCATTGTTTTGTTTTAGCATTGGCATTTAAATCTGTTCTTTTCCTACTAAAAATATTGTTTGGGAATGGGTCAAATCATAGGGAATGCAAGCCAAATTATCATCTCCAAACCAGATAATATTATTGATGATATTTTCCAGTTATATGATTGTCAACTCATAAACATTCCTTGCTTGGAACTTCTTTGAATTGTTTCTTCATTTTTGGTCTGTTTATTACTTTTGTATGTACATTTTAAGCCCAACACTATTTTTTTTTTCTTTTTTGTCTCTCCCTCCTTTTAGATGTTGTGTCAATTCCCAAGACAAATGAGAATTTCCGGCTTCTTTATGACACAAAAGGTCGATTCCGTCTACATTCAGTGAGGGATGAAGAGGCTAAGGTTAGCTACTATCCTTTTGATATTAAACTTTGACCTTCTATTTGTTACAATCTTGTTGTATAAAGTGTACTAGTTTCAAAGGAAAATAGATGCAAGTACAAAGTTGTTGGCATTAATAGTTCATGAATTATATGGGAGAGGTTTAGTACTTGTCCAGTTGGAATGTCGTATTCTAAAACCATTATGCAGTTTTCAGTGTGATATCTTCGAGTTAGCTGTTCTTTCAGATTATTATCATGTGATGTTCGTGTAGGAAAATAAATCAATATCCTATAACCCTCTGGAGTAACAGGCTGGACACTGTTTCTTTGTTCATGATATAATTAGATGATTCATGATTGACTTTTATATTTGCAGTATAAGCTGTGCAAAGTTCGCTCGGTGCAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACTTACGATGGGCGCACAATCCGTTATCCTGACCCTCTGATTAAGGCGAATGACACCATCAAGCTGGACCTTGACTCCAACAAGATTGCTGATTTCATCAAGTTTGATGTAGGAAATGTTGTGATGGTGACTGGTGGAAGAAACAGAGGCAGGGTTGGAGTGATAAAGAACAGGGAAAAGCATAAGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACTGGGCACGAATTTGCGACTCGGCTGGGCAATGTGTTCACAATTGGCAAAGGGACTAAACCATGGGTGTCCCTACCCAAGGGGAAGGGTATTAAATTATCCATCATCGAAGAAGCCAGGAAGAGGCTGGCAAGCCAAGCTGCAGTTACTGCTTAA

mRNA sequence

ATGGCGGTTGAAGACGATTTCAGTTTCCCCACCGCCTTAGAGCCTTTCAGCCGTGGCGGGATCGATTCGCCGCCGCTCTGGCATCTCTCTCCGGTCGCATCCCCGATTTCCTACCGTCAACAAACAGCCTGCGATTGGAATTTCAGAGACACGGGGGTGGACGGTGGGAAGAGCGATCGGTTACCGTCGGGGAGATTTACGGCGTCGTTGCAGAGGAGGAGAAGATTTTCGAGCGATGCGGAGGAGGAGGAGGTGGCAGCGGCGGAGAAGATGGACGTGCTTTGGGAGAATTTCAACGAGGAGTTGTCGAGGAGTCGGAGATCCAGGTTGATGAAATCGGCGGAATTGGAGGAGATTGAGGTTGTGAAGACGCGGCGGCGGATGGGGGAATTAAATCTATCGGAGACGTCCGGCGCGGTGGCGACGACGAGGAAGGCGACGGGGAAGACGGCGTTTGTTAAGGCAAGGGGACTGAAGAAGCATTTAAAGAGGCTCAATGCTCCGAAGCATTGGATGCTTGACAAACTTGGTGGTGCATTTGCCCCCAAACCTTCATCTGGACCCCATAAGTCAAGGGAATGCCTCCCATTGATCCTTATATTGAGGAACCGACTGAAATATGCTCTCACATATCGTGAGGTAATTGCAATTTTAATGCAACGACATGTTTTGGTTGATGGGAAGGTCAGGACAGACAAGACTTTCCCTGCTGGTTTCATGGATGTTGTGTCAATTCCCAAGACAAATGAGAATTTCCGGCTTCTTTATGACACAAAAGGTCGATTCCGTCTACATTCAGTGAGGGATGAAGAGGCTAAGTATAAGCTGTGCAAAGTTCGCTCGGTGCAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACTTACGATGGGCGCACAATCCGTTATCCTGACCCTCTGATTAAGGCGAATGACACCATCAAGCTGGACCTTGACTCCAACAAGATTGCTGATTTCATCAAGTTTGATGTAGGAAATGTTGTGATGGTGACTGGTGGAAGAAACAGAGGCAGGGTTGGAGTGATAAAGAACAGGGAAAAGCATAAGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACTGGGCACGAATTTGCGACTCGGCTGGGCAATGTGTTCACAATTGGCAAAGGGACTAAACCATGGGTGTCCCTACCCAAGGGGAAGGGTATTAAATTATCCATCATCGAAGAAGCCAGGAAGAGGCTGGCAAGCCAAGCTGCAGTTACTGCTTAA

Coding sequence (CDS)

ATGGCGGTTGAAGACGATTTCAGTTTCCCCACCGCCTTAGAGCCTTTCAGCCGTGGCGGGATCGATTCGCCGCCGCTCTGGCATCTCTCTCCGGTCGCATCCCCGATTTCCTACCGTCAACAAACAGCCTGCGATTGGAATTTCAGAGACACGGGGGTGGACGGTGGGAAGAGCGATCGGTTACCGTCGGGGAGATTTACGGCGTCGTTGCAGAGGAGGAGAAGATTTTCGAGCGATGCGGAGGAGGAGGAGGTGGCAGCGGCGGAGAAGATGGACGTGCTTTGGGAGAATTTCAACGAGGAGTTGTCGAGGAGTCGGAGATCCAGGTTGATGAAATCGGCGGAATTGGAGGAGATTGAGGTTGTGAAGACGCGGCGGCGGATGGGGGAATTAAATCTATCGGAGACGTCCGGCGCGGTGGCGACGACGAGGAAGGCGACGGGGAAGACGGCGTTTGTTAAGGCAAGGGGACTGAAGAAGCATTTAAAGAGGCTCAATGCTCCGAAGCATTGGATGCTTGACAAACTTGGTGGTGCATTTGCCCCCAAACCTTCATCTGGACCCCATAAGTCAAGGGAATGCCTCCCATTGATCCTTATATTGAGGAACCGACTGAAATATGCTCTCACATATCGTGAGGTAATTGCAATTTTAATGCAACGACATGTTTTGGTTGATGGGAAGGTCAGGACAGACAAGACTTTCCCTGCTGGTTTCATGGATGTTGTGTCAATTCCCAAGACAAATGAGAATTTCCGGCTTCTTTATGACACAAAAGGTCGATTCCGTCTACATTCAGTGAGGGATGAAGAGGCTAAGTATAAGCTGTGCAAAGTTCGCTCGGTGCAGTTTGGGCAAAAGGGCATCCCTTATCTGAACACTTACGATGGGCGCACAATCCGTTATCCTGACCCTCTGATTAAGGCGAATGACACCATCAAGCTGGACCTTGACTCCAACAAGATTGCTGATTTCATCAAGTTTGATGTAGGAAATGTTGTGATGGTGACTGGTGGAAGAAACAGAGGCAGGGTTGGAGTGATAAAGAACAGGGAAAAGCATAAGGGAAGCTTTGAAACAATCCACATTCAGGATGCAACTGGGCACGAATTTGCGACTCGGCTGGGCAATGTGTTCACAATTGGCAAAGGGACTAAACCATGGGTGTCCCTACCCAAGGGGAAGGGTATTAAATTATCCATCATCGAAGAAGCCAGGAAGAGGCTGGCAAGCCAAGCTGCAGTTACTGCTTAA

Protein sequence

MAVEDDFSFPTALEPFSRGGIDSPPLWHLSPVASPISYRQQTACDWNFRDTGVDGGKSDRLPSGRFTASLQRRRRFSSDAEEEEVAAAEKMDVLWENFNEELSRSRRSRLMKSAELEEIEVVKTRRRMGELNLSETSGAVATTRKATGKTAFVKARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLASQAAVTA

Homology

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BLAST of HG10022507 vs. NCBI nr
Match: XP_038899765.1 (40S ribosomal protein S4-3-like [Benincasa hispida])

HSP 1 Score: 530.8 bits (1366), Expect = 1.1e-146
Identity = 263/263 (100.00%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 155 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 214
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 215 IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 274
           IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 275 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 334
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 181

Query: 335 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 394
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 395 KGIKLSIIEEARKRLASQAAVTA 418
           KGIKLSIIEEARKRLASQAAVTA
Sbjct: 242 KGIKLSIIEEARKRLASQAAVTA 264

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BLAST of HG10022507 vs. NCBI nr
Match: XP_022132117.1 (40S ribosomal protein S4-3 [Momordica charantia])

HSP 1 Score: 529.6 bits (1363), Expect = 2.4e-146
Identity = 262/263 (99.62%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 155 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 214
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 215 IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 274
           IAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 275 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 334
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 181

Query: 335 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 394
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 395 KGIKLSIIEEARKRLASQAAVTA 418
           KGIKLSIIEEARKRLASQAAVTA
Sbjct: 242 KGIKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of HG10022507 vs. NCBI nr
Match: XP_038900121.1 (40S ribosomal protein S4-3 [Benincasa hispida])

HSP 1 Score: 529.3 bits (1362), Expect = 3.1e-146
Identity = 262/263 (99.62%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 155 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 214
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 215 IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 274
           IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 275 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 334
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 181

Query: 335 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 394
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 395 KGIKLSIIEEARKRLASQAAVTA 418
           KGIKLSIIEEARKRLASQAAVTA
Sbjct: 242 KGIKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of HG10022507 vs. NCBI nr
Match: XP_004150395.3 (40S ribosomal protein S4-3 [Cucumis sativus] >KAE8646159.1 hypothetical protein Csa_016358 [Cucumis sativus])

HSP 1 Score: 527.7 bits (1358), Expect = 9.0e-146
Identity = 261/263 (99.24%), Postives = 262/263 (99.62%), Query Frame = 0


Query: 155 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 214
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 215 IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 274
           IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 275 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 334
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 181

Query: 335 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 394
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 395 KGIKLSIIEEARKRLASQAAVTA 418
           KGIKLSIIEEARKRLASQA VTA
Sbjct: 242 KGIKLSIIEEARKRLASQATVTA 264

[Close]

BLAST of HG10022507 vs. NCBI nr
Match: KAA0061270.1 (40S ribosomal protein S4-3-like [Cucumis melo var. makuwa] >TYK09850.1 40S ribosomal protein S4-3-like [Cucumis melo var. makuwa])

HSP 1 Score: 527.3 bits (1357), Expect = 1.2e-145
Identity = 261/263 (99.24%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 155 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 214
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 16  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 75

Query: 215 IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 274
           IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 76  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAKY 135

Query: 275 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 334
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVV
Sbjct: 136 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 195

Query: 335 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 394
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 196 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 255

Query: 395 KGIKLSIIEEARKRLASQAAVTA 418
           KGIKLSIIEEARKRLASQAAVTA
Sbjct: 256 KGIKLSIIEEARKRLASQAAVTA 278

[Close]

BLAST of HG10022507 vs. ExPASy Swiss-Prot
Match: Q8VYK6 (40S ribosomal protein S4-3 OS=Arabidopsis thaliana OX=3702 GN=RPS4D PE=2 SV=2)

HSP 1 Score: 503.4 bits (1295), Expect = 2.4e-141
Identity = 241/260 (92.69%), Postives = 256/260 (98.46%), Query Frame = 0


Query: 155 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 214
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 215 IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 274
           I+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 275 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 334
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL++NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVV 181

Query: 335 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 394
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 395 KGIKLSIIEEARKRLASQAA 415
           KGIKL+IIEEARKRLASQ A
Sbjct: 242 KGIKLTIIEEARKRLASQQA 261

[Close]

BLAST of HG10022507 vs. ExPASy Swiss-Prot
Match: P49204 (40S ribosomal protein S4-2 OS=Arabidopsis thaliana OX=3702 GN=RPS4B PE=2 SV=4)

HSP 1 Score: 503.1 bits (1294), Expect = 3.1e-141
Identity = 241/260 (92.69%), Postives = 255/260 (98.08%), Query Frame = 0


Query: 155 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 214
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 215 IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 274
           I+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 275 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 334
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVV 181

Query: 335 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 394
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 395 KGIKLSIIEEARKRLASQAA 415
           KGIKL+IIEEARKRLASQ A
Sbjct: 242 KGIKLTIIEEARKRLASQQA 261

[Close]

BLAST of HG10022507 vs. ExPASy Swiss-Prot
Match: P46300 (40S ribosomal protein S4 OS=Solanum tuberosum OX=4113 GN=RPS4 PE=2 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 5.3e-141
Identity = 241/263 (91.63%), Postives = 258/263 (98.10%), Query Frame = 0


Query: 155 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 214
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL++I+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVIIMRNRLKYALTYREV 61

Query: 215 IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 274
           I+ILMQR V+VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS+RDEE+K+
Sbjct: 62  ISILMQRQVMVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSLRDEESKF 121

Query: 275 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 334
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKI DFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVV 181

Query: 335 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 394
           MVTGGRNRGRVGVIKNREKHKGSFET+HIQD+ GHEFATRLGNVFT+GKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETLHIQDSQGHEFATRLGNVFTLGKGTKPWVSLPKG 241

Query: 395 KGIKLSIIEEARKRLASQAAVTA 418
           KGIKL+IIE+ARKRLA+Q+A  A
Sbjct: 242 KGIKLTIIEDARKRLAAQSATPA 264

[Close]

BLAST of HG10022507 vs. ExPASy Swiss-Prot
Match: Q93VH9 (40S ribosomal protein S4-1 OS=Arabidopsis thaliana OX=3702 GN=RPS4A PE=2 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 1.5e-140
Identity = 239/260 (91.92%), Postives = 255/260 (98.08%), Query Frame = 0


Query: 155 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 214
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 215 IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 274
           I+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 275 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 334
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVV 181

Query: 335 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 394
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 395 KGIKLSIIEEARKRLASQAA 415
           KGIKL+IIEEARKRL++Q A
Sbjct: 242 KGIKLTIIEEARKRLSAQQA 261

[Close]

BLAST of HG10022507 vs. ExPASy Swiss-Prot
Match: P46299 (40S ribosomal protein S4 OS=Gossypium hirsutum OX=3635 GN=RPS4 PE=2 SV=1)

HSP 1 Score: 495.4 bits (1274), Expect = 6.5e-139
Identity = 241/260 (92.69%), Postives = 252/260 (96.92%), Query Frame = 0


Query: 155 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 214
           ARGLKKHLKRLNAP+HWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPRHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 215 IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 274
           IAILMQRHV+VDGKVRTDKT+PAGFMDVVSIPKTNE+FRLLYDTKGRF LH++  +E K+
Sbjct: 62  IAILMQRHVMVDGKVRTDKTYPAGFMDVVSIPKTNEDFRLLYDTKGRFCLHAITGDETKF 121

Query: 275 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 334
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKI DFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIVDFIKFDVGNVV 181

Query: 335 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 394
           MVTGGRNRGRVGVIKNREKHKGSFETIH+QDA GHEFATRLGNVFTIGKGTKPWVSLPK 
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHVQDAAGHEFATRLGNVFTIGKGTKPWVSLPKR 241

Query: 395 KGIKLSIIEEARKRLASQAA 415
           KGIKLSIIEEARKRLA+Q A
Sbjct: 242 KGIKLSIIEEARKRLAAQNA 261

[Close]

BLAST of HG10022507 vs. ExPASy TrEMBL
Match: A0A6J1BSY6 (40S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111005064 PE=3 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 1.1e-146
Identity = 262/263 (99.62%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 155 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 214
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 215 IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 274
           IAILMQRHVLVDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 275 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 334
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 181

Query: 335 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 394
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 395 KGIKLSIIEEARKRLASQAAVTA 418
           KGIKLSIIEEARKRLASQAAVTA
Sbjct: 242 KGIKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of HG10022507 vs. ExPASy TrEMBL
Match: A0A5A7V1R9 (40S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold39G00160 PE=3 SV=1)

HSP 1 Score: 527.3 bits (1357), Expect = 5.7e-146
Identity = 261/263 (99.24%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 155 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 214
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 16  ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 75

Query: 215 IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 274
           IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 76  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAKY 135

Query: 275 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 334
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVV
Sbjct: 136 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 195

Query: 335 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 394
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 196 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 255

Query: 395 KGIKLSIIEEARKRLASQAAVTA 418
           KGIKLSIIEEARKRLASQAAVTA
Sbjct: 256 KGIKLSIIEEARKRLASQAAVTA 278

[Close]

BLAST of HG10022507 vs. ExPASy TrEMBL
Match: A0A0A0K4K7 (40S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_7G282410 PE=3 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 7.5e-146
Identity = 260/263 (98.86%), Postives = 263/263 (100.00%), Query Frame = 0


Query: 155 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 214
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 215 IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 274
           IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKT+ENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 62  IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTSENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 275 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 334
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDL+SNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLESNKIADFIKFDVGNVV 181

Query: 335 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 394
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFT+GKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTVGKGTKPWVSLPKG 241

Query: 395 KGIKLSIIEEARKRLASQAAVTA 418
           KGIKLSIIEEARKRLASQAAVTA
Sbjct: 242 KGIKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of HG10022507 vs. ExPASy TrEMBL
Match: A0A6J1D0L7 (40S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111015952 PE=3 SV=1)

HSP 1 Score: 526.9 bits (1356), Expect = 7.5e-146
Identity = 260/263 (98.86%), Postives = 262/263 (99.62%), Query Frame = 0


Query: 155 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 214
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 61

Query: 215 IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 274
           IAILMQRHVLVD KVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY
Sbjct: 62  IAILMQRHVLVDAKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 121

Query: 275 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 334
           KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV
Sbjct: 122 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 181

Query: 335 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 394
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 241

Query: 395 KGIKLSIIEEARKRLASQAAVTA 418
           KG+KLSIIEEARKRLASQAAVTA
Sbjct: 242 KGVKLSIIEEARKRLASQAAVTA 264

[Close]

BLAST of HG10022507 vs. ExPASy TrEMBL
Match: A0A5D3BXA6 (40S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold675G00330 PE=3 SV=1)

HSP 1 Score: 526.6 bits (1355), Expect = 9.7e-146
Identity = 260/269 (96.65%), Postives = 265/269 (98.51%), Query Frame = 0


Query: 149 KTAFVKARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYA 208
           +T    ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYA
Sbjct: 6   QTLSPSARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYA 65

Query: 209 LTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVR 268
           LTYREVIAILMQRHVLVDGKVRTDKTFPAGFMD++SIPKTNENFRLLYDTKGRFRLHSVR
Sbjct: 66  LTYREVIAILMQRHVLVDGKVRTDKTFPAGFMDILSIPKTNENFRLLYDTKGRFRLHSVR 125

Query: 269 DEEAKYKLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKF 328
           DEEAKYKLCKVRSVQFGQKGIPYLNT+DGRTIRYPDPLIKANDTIKLDL+SNKIADFIKF
Sbjct: 126 DEEAKYKLCKVRSVQFGQKGIPYLNTFDGRTIRYPDPLIKANDTIKLDLESNKIADFIKF 185

Query: 329 DVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPW 388
           DVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPW
Sbjct: 186 DVGNVVMVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPW 245

Query: 389 VSLPKGKGIKLSIIEEARKRLASQAAVTA 418
           VSLPKGKGIKLSIIEEARKRLASQAAVTA
Sbjct: 246 VSLPKGKGIKLSIIEEARKRLASQAAVTA 274

[Close]

BLAST of HG10022507 vs. TAIR 10
Match: AT5G58420.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 503.4 bits (1295), Expect = 1.7e-142
Identity = 241/260 (92.69%), Postives = 256/260 (98.46%), Query Frame = 0


Query: 155 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 214
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 215 IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 274
           I+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 275 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 334
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL++NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEANKIVEFIKFDVGNVV 181

Query: 335 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 394
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 395 KGIKLSIIEEARKRLASQAA 415
           KGIKL+IIEEARKRLASQ A
Sbjct: 242 KGIKLTIIEEARKRLASQQA 261

[Close]

BLAST of HG10022507 vs. TAIR 10
Match: AT5G07090.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 503.1 bits (1294), Expect = 2.2e-142
Identity = 241/260 (92.69%), Postives = 255/260 (98.08%), Query Frame = 0


Query: 155 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 214
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 215 IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 274
           I+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 275 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 334
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVV 181

Query: 335 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 394
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 395 KGIKLSIIEEARKRLASQAA 415
           KGIKL+IIEEARKRLASQ A
Sbjct: 242 KGIKLTIIEEARKRLASQQA 261

[Close]

BLAST of HG10022507 vs. TAIR 10
Match: AT2G17360.1 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 500.7 bits (1288), Expect = 1.1e-141
Identity = 239/260 (91.92%), Postives = 255/260 (98.08%), Query Frame = 0


Query: 155 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 214
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 215 IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 274
           I+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 275 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 334
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVV
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVV 181

Query: 335 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKG 394
           MVTGGRNRGRVGVIKNREKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKG
Sbjct: 182 MVTGGRNRGRVGVIKNREKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKG 241

Query: 395 KGIKLSIIEEARKRLASQAA 415
           KGIKL+IIEEARKRL++Q A
Sbjct: 242 KGIKLTIIEEARKRLSAQQA 261

[Close]

BLAST of HG10022507 vs. TAIR 10
Match: AT5G07090.2 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 467.2 bits (1201), Expect = 1.3e-131
Identity = 224/243 (92.18%), Postives = 238/243 (97.94%), Query Frame = 0


Query: 172 MLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREVIAILMQRHVLVDGKVRT 231
           MLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREVI+ILMQRH+ VDGKVRT
Sbjct: 1   MLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREVISILMQRHIQVDGKVRT 60

Query: 232 DKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKYKLCKVRSVQFGQKGIPY 291
           DKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK+KLCKVRS+QFGQKGIPY
Sbjct: 61  DKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKFKLCKVRSIQFGQKGIPY 120

Query: 292 LNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVVMVTGGRNRGRVGVIKNR 351
           LNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVGNVVMVTGGRNRGRVGVIKNR
Sbjct: 121 LNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGNVVMVTGGRNRGRVGVIKNR 180

Query: 352 EKHKGSFETIHIQDATGHEFATRLGNVFTIGKGTKPWVSLPKGKGIKLSIIEEARKRLAS 411
           EKHKGSFETIHIQD+TGHEFATRLGNV+TIGKGTKPWVSLPKGKGIKL+IIEEARKRLAS
Sbjct: 181 EKHKGSFETIHIQDSTGHEFATRLGNVYTIGKGTKPWVSLPKGKGIKLTIIEEARKRLAS 240

Query: 412 QAA 415
           Q A
Sbjct: 241 QQA 243

[Close]

BLAST of HG10022507 vs. TAIR 10
Match: AT2G17360.2 (Ribosomal protein S4 (RPS4A) family protein )

HSP 1 Score: 346.7 bits (888), Expect = 2.7e-95
Identity = 163/180 (90.56%), Postives = 174/180 (96.67%), Query Frame = 0


Query: 155 ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLILILRNRLKYALTYREV 214
           ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPL+LI+RNRLKYALTYREV
Sbjct: 2   ARGLKKHLKRLNAPKHWMLDKLGGAFAPKPSSGPHKSRECLPLVLIIRNRLKYALTYREV 61

Query: 215 IAILMQRHVLVDGKVRTDKTFPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSVRDEEAKY 274
           I+ILMQRH+ VDGKVRTDKT+PAGFMDVVSIPKTNENFRLLYDTKGRFRLHS++DEEAK+
Sbjct: 62  ISILMQRHIQVDGKVRTDKTYPAGFMDVVSIPKTNENFRLLYDTKGRFRLHSIKDEEAKF 121

Query: 275 KLCKVRSVQFGQKGIPYLNTYDGRTIRYPDPLIKANDTIKLDLDSNKIADFIKFDVGNVV 334
           KLCKVRS+QFGQKGIPYLNTYDGRTIRYPDPLIK NDTIKLDL+ NKI +FIKFDVG  V
Sbjct: 122 KLCKVRSIQFGQKGIPYLNTYDGRTIRYPDPLIKPNDTIKLDLEENKIVEFIKFDVGKCV 181

The following BLAST results are available for this feature:

BLAST of HG10022507 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038899765.1	1.1e-146	100.00	40S ribosomal protein S4-3-like [Benincasa hispida]	[more]
XP_022132117.1	2.4e-146	99.62	40S ribosomal protein S4-3 [Momordica charantia]	[more]
XP_038900121.1	3.1e-146	99.62	40S ribosomal protein S4-3 [Benincasa hispida]	[more]
XP_004150395.3	9.0e-146	99.24	40S ribosomal protein S4-3 [Cucumis sativus] >KAE8646159.1 hypothetical protein ...	[more]
KAA0061270.1	1.2e-145	99.24	40S ribosomal protein S4-3-like [Cucumis melo var. makuwa] >TYK09850.1 40S ribos...	[more]

BLAST of HG10022507 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8VYK6	2.4e-141	92.69	40S ribosomal protein S4-3 OS=Arabidopsis thaliana OX=3702 GN=RPS4D PE=2 SV=2	[more]
P49204	3.1e-141	92.69	40S ribosomal protein S4-2 OS=Arabidopsis thaliana OX=3702 GN=RPS4B PE=2 SV=4	[more]
P46300	5.3e-141	91.63	40S ribosomal protein S4 OS=Solanum tuberosum OX=4113 GN=RPS4 PE=2 SV=1	[more]
Q93VH9	1.5e-140	91.92	40S ribosomal protein S4-1 OS=Arabidopsis thaliana OX=3702 GN=RPS4A PE=2 SV=1	[more]
P46299	6.5e-139	92.69	40S ribosomal protein S4 OS=Gossypium hirsutum OX=3635 GN=RPS4 PE=2 SV=1	[more]

BLAST of HG10022507 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BSY6	1.1e-146	99.62	40S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111005064 PE=3 SV=...	[more]
A0A5A7V1R9	5.7e-146	99.24	40S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A0A0K4K7	7.5e-146	98.86	40S ribosomal protein S4 OS=Cucumis sativus OX=3659 GN=Csa_7G282410 PE=3 SV=1	[more]
A0A6J1D0L7	7.5e-146	98.86	40S ribosomal protein S4 OS=Momordica charantia OX=3673 GN=LOC111015952 PE=3 SV=...	[more]
A0A5D3BXA6	9.7e-146	96.65	40S ribosomal protein S4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of HG10022507 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58420.1	1.7e-142	92.69	Ribosomal protein S4 (RPS4A) family protein	[more]
AT5G07090.1	2.2e-142	92.69	Ribosomal protein S4 (RPS4A) family protein	[more]
AT2G17360.1	1.1e-141	91.92	Ribosomal protein S4 (RPS4A) family protein	[more]
AT5G07090.2	1.3e-131	92.18	Ribosomal protein S4 (RPS4A) family protein	[more]
AT2G17360.2	2.7e-95	90.56	Ribosomal protein S4 (RPS4A) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002942	RNA-binding S4 domain	SMART	SM00363	s4_6	coord: 195..259 e-value: 7.9E-5 score: 32.0
IPR002942	RNA-binding S4 domain	PFAM	PF01479	S4	coord: 200..243 e-value: 1.6E-6 score: 27.7
IPR002942	RNA-binding S4 domain	CDD	cd00165	S4	coord: 204..265 e-value: 5.23548E-6 score: 41.8514
IPR005824	KOW	SMART	SM00739	kow_9	coord: 327..354 e-value: 7.7E-4 score: 28.8
IPR005824	KOW	PFAM	PF00467	KOW	coord: 330..363 e-value: 2.5E-6 score: 27.2
IPR032277	40S ribosomal protein S4, C-terminal domain	PFAM	PF16121	40S_S4_C	coord: 365..411 e-value: 1.3E-25 score: 88.8
IPR013843	Ribosomal protein S4e, N-terminal	PFAM	PF08071	RS4NT	coord: 156..192 e-value: 7.8E-19 score: 67.5
IPR038237	Ribosomal protein S4e, central domain superfamily	GENE3D	2.40.50.740		coord: 275..325 e-value: 2.2E-30 score: 106.2
IPR013845	Ribosomal protein S4e, central region	PFAM	PF00900	Ribosomal_S4e	coord: 248..322 e-value: 3.2E-35 score: 119.9
IPR036986	RNA-binding S4 domain superfamily	GENE3D	3.10.290.10		coord: 154..270 e-value: 3.3E-60 score: 203.2
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 328..398 e-value: 3.8E-39 score: 134.4
IPR000876	Ribosomal protein S4e	PANTHER	PTHR11581	30S/40S RIBOSOMAL PROTEIN S4	coord: 374..417 coord: 149..373
IPR000876	Ribosomal protein S4e	HAMAP	MF_00485	Ribosomal_S4e	coord: 160..391 score: 36.615967
None	No IPR available	PANTHER	PTHR11581:SF33	40S RIBOSOMAL PROTEIN S4	coord: 374..417
None	No IPR available	PANTHER	PTHR11581:SF33	40S RIBOSOMAL PROTEIN S4	coord: 149..373
None	No IPR available	PROSITE	PS50889	S4	coord: 195..257 score: 9.046091
IPR018199	Ribosomal protein S4e, N-terminal, conserved site	PROSITE	PS00528	RIBOSOMAL_S4E	coord: 161..175
IPR041982	Ribosomal protein S4, KOW domain	CDD	cd06087	KOW_RPS4	coord: 328..382 e-value: 1.14683E-30 score: 109.913

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10022507.1	HG10022507.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding