HG10022461 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10022461
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
Location	Chr05: 24580468 .. 24581373 (+)
RNA-Seq Expression	HG10022461
Synteny	HG10022461

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGATCTCTCTCAATCTTCTTCAACTTCAAGCAAATCCAGCACTGCCCAAGTTCTTCAAATGGAACCCGGTCCGACCGGCGGTGTATTTCAGAGCTCCGACGAGGTCAACCATCGTCATGTCGCAGATCACTCCGTCGTACTGGGCGGCCATAAATGAAGATATTGAGGATCATCTCCGGCGGGTCATTCCGGCGAAGGACCCGCCGGCGGTATACGAGCCGTTGGGTCATTTCATCTTCTCAGCCCCACGAAATTCCGCTCCTGCACTGTGTATTGCCGCCTGCGAGCTCGTCGGCGGCCACCGGGACCAGGCCATGGCGGCAGCTATTGCACTCCAACTTATCCACGCGGCGGCGTACACTCACGAATACCCTCCACTGACGGCGCGTGCAATATCACGCGCCGCCGTTGTCGACCGTGTTTATGGCCGCAACATCCAGCTGCTGACTGGCGATGGAATAGCTCCGATTGTGTTCGAGATCCTAGCGGGATCTTGCGACTGGAGCGTGAGCGGGTCGGAGCGGGTTCGGCGTGTGATGGTGGAAATGGCACGGGCGATGGGGACGGAAGGGTGGATTGGGGGGCAATTTCGGGGATTGGAGGAGTCGGCAACGGCGGAGGAAGTGATCGAGAAGACGGAAGGTGGGCTACACGCGCGTGGGAGCGCGTGTGGGGCAATATTGGGAGGTGGAAGTGAAGAGGAAATAGAGAAAATGAGGAAATATGGGAAATTGGTGGGAATGGTAAAGGGAATGTCAAAAAATGTGTTTGGAGGGAAAGAAAATGAGAGAAAGAAAGAGAAAATTGGTGAGTTGAAGGTTTTGGCTTTCAAGGAATTGGAAGATTTCAAAGGAGAAAAAGTTCATGAGATCTATGGATTTCTTGATTTTGAGGGACTTTAG

mRNA sequence

ATGGCGATCTCTCTCAATCTTCTTCAACTTCAAGCAAATCCAGCACTGCCCAAGTTCTTCAAATGGAACCCGGTCCGACCGGCGGTGTATTTCAGAGCTCCGACGAGGTCAACCATCGTCATGTCGCAGATCACTCCGTCGTACTGGGCGGCCATAAATGAAGATATTGAGGATCATCTCCGGCGGGTCATTCCGGCGAAGGACCCGCCGGCGGTATACGAGCCGTTGGGTCATTTCATCTTCTCAGCCCCACGAAATTCCGCTCCTGCACTGTGTATTGCCGCCTGCGAGCTCGTCGGCGGCCACCGGGACCAGGCCATGGCGGCAGCTATTGCACTCCAACTTATCCACGCGGCGGCGTACACTCACGAATACCCTCCACTGACGGCGCGTGCAATATCACGCGCCGCCGTTGTCGACCGTGTTTATGGCCGCAACATCCAGCTGCTGACTGGCGATGGAATAGCTCCGATTGTGTTCGAGATCCTAGCGGGATCTTGCGACTGGAGCGTGAGCGGGTCGGAGCGGGTTCGGCGTGTGATGGTGGAAATGGCACGGGCGATGGGGACGGAAGGGTGGATTGGGGGGCAATTTCGGGGATTGGAGGAGTCGGCAACGGCGGAGGAAGTGATCGAGAAGACGGAAGGTGGGCTACACGCGCGTGGGAGCGCGTGTGGGGCAATATTGGGAGGTGGAAGTGAAGAGGAAATAGAGAAAATGAGGAAATATGGGAAATTGGTGGGAATGGTAAAGGGAATGTCAAAAAATGTGTTTGGAGGGAAAGAAAATGAGAGAAAGAAAGAGAAAATTGGTGAGTTGAAGGTTTTGGCTTTCAAGGAATTGGAAGATTTCAAAGGAGAAAAAGTTCATGAGATCTATGGATTTCTTGATTTTGAGGGACTTTAG

Coding sequence (CDS)

ATGGCGATCTCTCTCAATCTTCTTCAACTTCAAGCAAATCCAGCACTGCCCAAGTTCTTCAAATGGAACCCGGTCCGACCGGCGGTGTATTTCAGAGCTCCGACGAGGTCAACCATCGTCATGTCGCAGATCACTCCGTCGTACTGGGCGGCCATAAATGAAGATATTGAGGATCATCTCCGGCGGGTCATTCCGGCGAAGGACCCGCCGGCGGTATACGAGCCGTTGGGTCATTTCATCTTCTCAGCCCCACGAAATTCCGCTCCTGCACTGTGTATTGCCGCCTGCGAGCTCGTCGGCGGCCACCGGGACCAGGCCATGGCGGCAGCTATTGCACTCCAACTTATCCACGCGGCGGCGTACACTCACGAATACCCTCCACTGACGGCGCGTGCAATATCACGCGCCGCCGTTGTCGACCGTGTTTATGGCCGCAACATCCAGCTGCTGACTGGCGATGGAATAGCTCCGATTGTGTTCGAGATCCTAGCGGGATCTTGCGACTGGAGCGTGAGCGGGTCGGAGCGGGTTCGGCGTGTGATGGTGGAAATGGCACGGGCGATGGGGACGGAAGGGTGGATTGGGGGGCAATTTCGGGGATTGGAGGAGTCGGCAACGGCGGAGGAAGTGATCGAGAAGACGGAAGGTGGGCTACACGCGCGTGGGAGCGCGTGTGGGGCAATATTGGGAGGTGGAAGTGAAGAGGAAATAGAGAAAATGAGGAAATATGGGAAATTGGTGGGAATGGTAAAGGGAATGTCAAAAAATGTGTTTGGAGGGAAAGAAAATGAGAGAAAGAAAGAGAAAATTGGTGAGTTGAAGGTTTTGGCTTTCAAGGAATTGGAAGATTTCAAAGGAGAAAAAGTTCATGAGATCTATGGATTTCTTGATTTTGAGGGACTTTAG

Protein sequence

MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAYTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRGLEESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIGELKVLAFKELEDFKGEKVHEIYGFLDFEGL

Homology

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BLAST of HG10022461 vs. NCBI nr
Match: XP_038896497.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 539.7 bits (1389), Expect = 1.7e-149
Identity = 271/301 (90.03%), Postives = 280/301 (93.02%), Query Frame = 0


Query: 1   MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHL 60
           MAISLNLLQLQANPA PKF KWNPVRPAVYFRAP RST+VMSQITPSYWA INEDIEDHL
Sbjct: 1   MAISLNLLQLQANPARPKFLKWNPVRPAVYFRAPARSTVVMSQITPSYWATINEDIEDHL 60

Query: 61  RRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAA 120
           R+VIPAKDPPAV+EPLGHFIFSAPRNSAPALCIAACELVGG RD+AMAAA ALQLIHAA 
Sbjct: 61  RQVIPAKDPPAVFEPLGHFIFSAPRNSAPALCIAACELVGGRRDKAMAAATALQLIHAAT 120

Query: 121 YTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRV 180
           YT EYPPLTAR ISRAAVVDR+YG NIQLLTGD IAPIVFEILAGSCDWS SGSERV+ V
Sbjct: 121 YTREYPPLTAREISRAAVVDRIYGANIQLLTGDAIAPIVFEILAGSCDWSESGSERVQHV 180

Query: 181 MVEMARAMGTEGWIGGQFRGLEESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKM 240
           MVEMARAMGTEGW+GGQFRGLEE ATAEEV EKTEGGLHA G ACGAILGGGSEEEIEKM
Sbjct: 181 MVEMARAMGTEGWVGGQFRGLEEEATAEEVSEKTEGGLHACGGACGAILGGGSEEEIEKM 240

Query: 241 RKYGKLVGMVKGMSKNVFGGKENERKKEKIGELKVLAFKELEDFKGEKVHEIYGFLDFEG 300
           RKYGKLVGMVKG+SKNVFGGKENERK+EKI E KVLAFK LE FKGEKVHEIYGFLDFEG
Sbjct: 241 RKYGKLVGMVKGLSKNVFGGKENERKREKIEEFKVLAFKVLEGFKGEKVHEIYGFLDFEG 300

Query: 301 L 302
           L
Sbjct: 301 L 301

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BLAST of HG10022461 vs. NCBI nr
Match: XP_023536167.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 487.3 bits (1253), Expect = 9.8e-134
Identity = 250/301 (83.06%), Postives = 267/301 (88.70%), Query Frame = 0


Query: 1   MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHL 60
           MAISLNLLQL  NP+LPKF   N +RPAVYFRAP R+T+VMSQITPSYWAAINEDI+DHL
Sbjct: 1   MAISLNLLQLHGNPSLPKFPNSNWLRPAVYFRAPARATVVMSQITPSYWAAINEDIDDHL 60

Query: 61  RRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAA 120
           RRVI AKDPPAVYEPLGHF+FSAPRNSA A+CIAACELVGGHRDQAMAAA ALQLI+AA 
Sbjct: 61  RRVIIAKDPPAVYEPLGHFVFSAPRNSAAAMCIAACELVGGHRDQAMAAATALQLIYAAT 120

Query: 121 YTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRV 180
           YT EYPPLTAR IS AAVVDRVYG NIQLLTG GIAPI FEILAGSCD S SGSERVRRV
Sbjct: 121 YTREYPPLTARGISNAAVVDRVYGPNIQLLTGVGIAPIGFEILAGSCDLSESGSERVRRV 180

Query: 181 MVEMARAMGTEGWIGGQFRGLEESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKM 240
           MVEMARAMG+EGWIGGQF+ LEE   AEEVIE TEG LHARG ACGAILGGGSEEEIEKM
Sbjct: 181 MVEMARAMGSEGWIGGQFKELEEVTAAEEVIEMTEGELHARGGACGAILGGGSEEEIEKM 240

Query: 241 RKYGKLVGMVKGMSKNVFGGKENERKKEKIGELKVLAFKELEDFKGEKVHEIYGFLDFEG 300
           RKYG++VGMVKG+SK VFGGKENERK+EKI ELK LAFKELE FKG+KV ++  F DFEG
Sbjct: 241 RKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGQKVDQMCNFFDFEG 300

Query: 301 L 302
           L
Sbjct: 301 L 301

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BLAST of HG10022461 vs. NCBI nr
Match: KAA0031902.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Cucumis melo var. makuwa])

HSP 1 Score: 479.6 bits (1233), Expect = 2.0e-131
Identity = 247/301 (82.06%), Postives = 264/301 (87.71%), Query Frame = 0


Query: 1   MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHL 60
           MAISLNLLQLQ N A PKFF+ N V PA Y R P RST+ MSQITPSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNLVPPAPYVRPPPRSTVFMSQITPSYWAAINEDIEDHL 60

Query: 61  RRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAA 120
           RRVIP KDP AVYEPLGHFI SAPRNSA ALCIAACELVGGHRDQAMAAA A+QLIHAA 
Sbjct: 61  RRVIPVKDPLAVYEPLGHFILSAPRNSASALCIAACELVGGHRDQAMAAATAIQLIHAAT 120

Query: 121 YTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRV 180
            THEYPPLTA   +RAAVV+RVY  +IQL+TGDGIAP+ FEILA SCDWS  GSERVRRV
Sbjct: 121 CTHEYPPLTASG-TRAAVVERVYRPSIQLMTGDGIAPMGFEILAESCDWSERGSERVRRV 180

Query: 181 MVEMARAMGTEGWIGGQFRGLEESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKM 240
           MVE++RAMGTEGWIGGQFRGL+E AT EEVIEK EGGLHA G ACGAI+GGG+EEEIEKM
Sbjct: 181 MVEVSRAMGTEGWIGGQFRGLDEEATVEEVIEKREGGLHACGGACGAIMGGGNEEEIEKM 240

Query: 241 RKYGKLVGMVKGMSKNVFGGKENERKKEKIGELKVLAFKELEDFKGEKVHEIYGFLDFEG 300
           RKYGKLVGMVKG++KNVFGGKENE+K+EKI ELKVLAFKELE F GE VHEIYGFLDF G
Sbjct: 241 RKYGKLVGMVKGLTKNVFGGKENEKKREKIEELKVLAFKELEGFNGEMVHEIYGFLDFVG 300

Query: 301 L 302
           L
Sbjct: 301 L 300

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BLAST of HG10022461 vs. NCBI nr
Match: XP_004139865.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic [Cucumis sativus] >KGN44166.1 hypothetical protein Csa_016347 [Cucumis sativus])

HSP 1 Score: 476.1 bits (1224), Expect = 2.2e-130
Identity = 244/298 (81.88%), Postives = 261/298 (87.58%), Query Frame = 0


Query: 1   MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHL 60
           MAISLNLLQLQ N A PKFF+ N + P  Y R P RS  VMSQITPSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL 60

Query: 61  RRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAA 120
           RRVIP KDP AVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAA A+QLI+AA 
Sbjct: 61  RRVIPVKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT 120

Query: 121 YTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRV 180
            THEYPPLTAR   RA+VVDRVYG N+QL+TGDGI P+ FEILA SCDWS  GSERVRRV
Sbjct: 121 CTHEYPPLTARG-KRASVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRV 180

Query: 181 MVEMARAMGTEGWIGGQFRGLEESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKM 240
           MVE+ARAMGTEGWIGGQFRGLEE AT EEVIEKTEGGLHA G ACGAI+GGG+EEEIEKM
Sbjct: 181 MVEVARAMGTEGWIGGQFRGLEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKM 240

Query: 241 RKYGKLVGMVKGMSKNVFGGKENERKKEKIGELKVLAFKELEDFKGEKVHEIYGFLDF 299
           RKYGKLVG+VKG+++ VFGGKENERK+EKI ELKVLAFKELE F GE V +IYGFLDF
Sbjct: 241 RKYGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDF 297

[Close]

BLAST of HG10022461 vs. NCBI nr
Match: XP_022975728.1 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 471.5 bits (1212), Expect = 5.5e-129
Identity = 244/304 (80.26%), Postives = 264/304 (86.84%), Query Frame = 0


Query: 1   MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHL 60
           MAISLNLLQL  NP+LPKF   N +RPAVYFRAP R+T+VMSQITPSYWAAINEDIE+HL
Sbjct: 1   MAISLNLLQLHGNPSLPKFPNSNWLRPAVYFRAPMRATVVMSQITPSYWAAINEDIEEHL 60

Query: 61  RRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAA 120
           RR+I AKDPP VYEPLGHF+FSAPRNSA A+CIAACE VGGHRDQAMAAA ALQLI+AA 
Sbjct: 61  RRIIIAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAMAAATALQLIYAAT 120

Query: 121 YTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRV 180
           YT EYPPLTAR  S AA+VDRVY  NIQLLTG GIAPI FEILAGSCD S SGS+RVRRV
Sbjct: 121 YTREYPPLTARGSSNAAMVDRVYAPNIQLLTGVGIAPIGFEILAGSCDLSESGSDRVRRV 180

Query: 181 MVEMARAMGTEGWIGGQFRGLEE---SATAEEVIEKTEGGLHARGSACGAILGGGSEEEI 240
           M EMARAMG+EGWIGGQF+ LEE   +A AEEVIEKTEG LHARG ACGAILG GSEEEI
Sbjct: 181 MGEMARAMGSEGWIGGQFKELEEVTAAAEAEEVIEKTEGELHARGGACGAILGSGSEEEI 240

Query: 241 EKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIGELKVLAFKELEDFKGEKVHEIYGFLD 300
           EKMRKYG++VGMVKG+SK VFGGKENERK+EKI ELK LAFKELE FKGEKV ++  F D
Sbjct: 241 EKMRKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGEKVDQMCNFFD 300

Query: 301 FEGL 302
           FEGL
Sbjct: 301 FEGL 304

[Close]

BLAST of HG10022461 vs. ExPASy Swiss-Prot
Match: Q39108 (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGR PE=1 SV=2)

HSP 1 Score: 123.6 bits (309), Expect = 3.7e-27
Identity = 80/268 (29.85%), Postives = 134/268 (50.00%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFS-APRNSAPALCIAACELVGGHRDQ 106
           +YW  +  +I   L   IP K P  +YE + + + +   + + P +C+AACEL GG R  
Sbjct: 49  TYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLA 108

Query: 107 AMAAAIALQLIHAAAYTH-EYPPLTARAISRAAVVDR-VYGRNIQLLTGDGIAPIVFEIL 166
           A   A AL+++HAA+  H + P +    + R    +  VYG  + +L GD + P+ F+ +
Sbjct: 109 AFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHI 168

Query: 167 AGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRGLEESA-TAEEVIEKTEGGLHARG 226
                  +     + R++ E+AR +G+ G   GQ+  LE        V EK  G +    
Sbjct: 169 VSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGECS 228

Query: 227 SACGAILGGGSEEEIEKMRKYGKLVGMVKGM-------SKNVFGGKENERKKEKIGELKV 286
           + CG +LGG +E+E++ +R+YG+ VGM+  +        K  + G   +   E   ELK 
Sbjct: 229 AVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGGAEKGMMEMAEELKE 288

Query: 287 LAFKELEDFK-----GEKVHEIYGFLDF 299
            A KEL+ F      G+ +  +Y F+D+
Sbjct: 289 KAKKELQVFDNKYGGGDTLVPLYTFVDY 316

[Close]

BLAST of HG10022461 vs. ExPASy Swiss-Prot
Match: Q94ID7 (Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=3981 GN=GGPS PE=1 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.5e-25
Identity = 73/214 (34.11%), Postives = 119/214 (55.61%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQA 106
           SY       I   L   IP ++P  ++E + + + +  +   PALC+AACELVGG+   A
Sbjct: 81  SYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPALCLAACELVGGNDSMA 140

Query: 107 MAAAIALQLIHAAAYTH-EYPPLTARAISRAAVVDR-VYGRNIQLLTGDGIAPIVFEILA 166
           M AA A+++IH  +  H + P +    + R    +  V+G ++ +L GD +    FE +A
Sbjct: 141 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVFGEDVAVLAGDALLAFAFEHIA 200

Query: 167 GSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRGLEESATAEEVIEKTEGGLHARGSA 226
            S   +VS S R+ R + E+A+A+G EG + GQ   +    ++E  +EK E  +H   +A
Sbjct: 201 VS-TLNVS-SARIVRAVGELAKAIGAEGLVAGQVVDINSEGSSEVDLEKLE-FIHIHKTA 260

Query: 227 --------CGAILGGGSEEEIEKMRKYGKLVGMV 251
                    GAILGGG++EE+EK+RKY + +G++
Sbjct: 261 KLLEGAVVLGAILGGGTDEEVEKLRKYARDIGLL 291

[Close]

BLAST of HG10022461 vs. ExPASy Swiss-Prot
Match: Q9LHR4 (Geranylgeranyl pyrophosphate synthase 12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At3g32040 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 6.6e-24
Identity = 80/245 (32.65%), Postives = 129/245 (52.65%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQA 106
           SY     E +   L   +P +DP A+ E + + + +  +   P LCIAACELVGG    A
Sbjct: 68  SYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATA 127

Query: 107 MAAAIALQLIHAAAYTHEYPPLTARAISRAA--VVDRVYGRNIQLLTGDGIAPIVFEILA 166
           M+AA A+++IH ++  H+  P    A  R       +V+G ++ +L GD +  + FE + 
Sbjct: 128 MSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAFEHMT 187

Query: 167 GSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQF-----RGLEESATAEEVIE-----KT 226
                 V+  ER+ R + E+A+A+GT+G + GQ      +GL       E +E     KT
Sbjct: 188 VVSSGLVA-PERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHLHKT 247

Query: 227 EGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIGELK 280
              L A  +  GAI+GGG+EEEI+K+RKYG+ +G++  +  ++    E+  +  K     
Sbjct: 248 AALLEA-AAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAGKD 307

[Close]

BLAST of HG10022461 vs. ExPASy Swiss-Prot
Match: P34802 (Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GGPPS1 PE=1 SV=2)

HSP 1 Score: 111.3 bits (277), Expect = 1.9e-23
Identity = 75/245 (30.61%), Postives = 129/245 (52.65%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQA 106
           SY     E +   L   +P ++P  ++E + + + +  +   P LCIAACELVGG    A
Sbjct: 78  SYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTA 137

Query: 107 MAAAIALQLIHAAAYTH-EYPPLTARAISRAAVVD-RVYGRNIQLLTGDGIAPIVFEILA 166
           M AA A+++IH  +  H + P +    + R    + +V+G ++ +L GD +    FE LA
Sbjct: 138 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLA 197

Query: 167 GSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQF-----RGLEESATAEEVIE-----KT 226
            +    V    RV R + E+A+A+GTEG + GQ       GL+ +    E +E     KT
Sbjct: 198 SATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKT 257

Query: 227 EGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIGELK 280
              L A  +  GAI+GGGS++EIE++RK+ + +G++  +  ++    ++ ++  K     
Sbjct: 258 AALLEA-SAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKD 317

[Close]

BLAST of HG10022461 vs. ExPASy Swiss-Prot
Match: Q43133 (Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis alba OX=3728 GN=GGPS1 PE=1 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 4.3e-23
Identity = 71/216 (32.87%), Postives = 117/216 (54.17%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQA 106
           SY     + +   L   +P ++P  ++E + + + +  +   P LCIAACELVGG    A
Sbjct: 74  SYIIRKADSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESLA 133

Query: 107 MAAAIALQLIHAAAYTH-EYPPLTARAISRAAVVD-RVYGRNIQLLTGDGIAPIVFEILA 166
           M A  A+++IH  +  H + P +    + R    + +VYG ++ +L GD +    FE LA
Sbjct: 134 MPARCAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLA 193

Query: 167 GSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQF-----RGLEESATAEEVIE-----KT 226
            +    VS + RV R + E+A+A+GTEG + GQ       GL+ +    E ++     KT
Sbjct: 194 SATSSEVSPA-RVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHLHKT 253

Query: 227 EGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMV 251
              L A  +  G I+GGGS+EEIE++RK+ + +G++
Sbjct: 254 AALLEA-SAVLGGIIGGGSDEEIERLRKFARCIGLL 287

[Close]

BLAST of HG10022461 vs. ExPASy TrEMBL
Match: A0A5A7SLD5 (Heterodimeric geranylgeranyl pyrophosphate synthase small subunit OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold29549G00010 PE=4 SV=1)

HSP 1 Score: 479.6 bits (1233), Expect = 9.9e-132
Identity = 247/301 (82.06%), Postives = 264/301 (87.71%), Query Frame = 0


Query: 1   MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHL 60
           MAISLNLLQLQ N A PKFF+ N V PA Y R P RST+ MSQITPSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNLVPPAPYVRPPPRSTVFMSQITPSYWAAINEDIEDHL 60

Query: 61  RRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAA 120
           RRVIP KDP AVYEPLGHFI SAPRNSA ALCIAACELVGGHRDQAMAAA A+QLIHAA 
Sbjct: 61  RRVIPVKDPLAVYEPLGHFILSAPRNSASALCIAACELVGGHRDQAMAAATAIQLIHAAT 120

Query: 121 YTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRV 180
            THEYPPLTA   +RAAVV+RVY  +IQL+TGDGIAP+ FEILA SCDWS  GSERVRRV
Sbjct: 121 CTHEYPPLTASG-TRAAVVERVYRPSIQLMTGDGIAPMGFEILAESCDWSERGSERVRRV 180

Query: 181 MVEMARAMGTEGWIGGQFRGLEESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKM 240
           MVE++RAMGTEGWIGGQFRGL+E AT EEVIEK EGGLHA G ACGAI+GGG+EEEIEKM
Sbjct: 181 MVEVSRAMGTEGWIGGQFRGLDEEATVEEVIEKREGGLHACGGACGAIMGGGNEEEIEKM 240

Query: 241 RKYGKLVGMVKGMSKNVFGGKENERKKEKIGELKVLAFKELEDFKGEKVHEIYGFLDFEG 300
           RKYGKLVGMVKG++KNVFGGKENE+K+EKI ELKVLAFKELE F GE VHEIYGFLDF G
Sbjct: 241 RKYGKLVGMVKGLTKNVFGGKENEKKREKIEELKVLAFKELEGFNGEMVHEIYGFLDFVG 300

Query: 301 L 302
           L
Sbjct: 301 L 300

[Close]

BLAST of HG10022461 vs. ExPASy TrEMBL
Match: A0A0A0K8P9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G211090 PE=4 SV=1)

HSP 1 Score: 476.1 bits (1224), Expect = 1.1e-130
Identity = 244/298 (81.88%), Postives = 261/298 (87.58%), Query Frame = 0


Query: 1   MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHL 60
           MAISLNLLQLQ N A PKFF+ N + P  Y R P RS  VMSQITPSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNSLPPMPYVRLPPRSAAVMSQITPSYWAAINEDIEDHL 60

Query: 61  RRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAA 120
           RRVIP KDP AVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAA A+QLI+AA 
Sbjct: 61  RRVIPVKDPVAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAATAIQLIYAAT 120

Query: 121 YTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRV 180
            THEYPPLTAR   RA+VVDRVYG N+QL+TGDGI P+ FEILA SCDWS  GSERVRRV
Sbjct: 121 CTHEYPPLTARG-KRASVVDRVYGSNVQLMTGDGITPMGFEILAESCDWSERGSERVRRV 180

Query: 181 MVEMARAMGTEGWIGGQFRGLEESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKM 240
           MVE+ARAMGTEGWIGGQFRGLEE AT EEVIEKTEGGLHA G ACGAI+GGG+EEEIEKM
Sbjct: 181 MVEVARAMGTEGWIGGQFRGLEEEATVEEVIEKTEGGLHACGGACGAIMGGGNEEEIEKM 240

Query: 241 RKYGKLVGMVKGMSKNVFGGKENERKKEKIGELKVLAFKELEDFKGEKVHEIYGFLDF 299
           RKYGKLVG+VKG+++ VFGGKENERK+EKI ELKVLAFKELE F GE V +IYGFLDF
Sbjct: 241 RKYGKLVGIVKGLTQIVFGGKENERKREKIEELKVLAFKELEGFNGEMVPQIYGFLDF 297

[Close]

BLAST of HG10022461 vs. ExPASy TrEMBL
Match: A0A6J1IK44 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111475905 PE=4 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 2.7e-129
Identity = 244/304 (80.26%), Postives = 264/304 (86.84%), Query Frame = 0


Query: 1   MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHL 60
           MAISLNLLQL  NP+LPKF   N +RPAVYFRAP R+T+VMSQITPSYWAAINEDIE+HL
Sbjct: 1   MAISLNLLQLHGNPSLPKFPNSNWLRPAVYFRAPMRATVVMSQITPSYWAAINEDIEEHL 60

Query: 61  RRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAA 120
           RR+I AKDPP VYEPLGHF+FSAPRNSA A+CIAACE VGGHRDQAMAAA ALQLI+AA 
Sbjct: 61  RRIIIAKDPPVVYEPLGHFVFSAPRNSAAAMCIAACEFVGGHRDQAMAAATALQLIYAAT 120

Query: 121 YTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRV 180
           YT EYPPLTAR  S AA+VDRVY  NIQLLTG GIAPI FEILAGSCD S SGS+RVRRV
Sbjct: 121 YTREYPPLTARGSSNAAMVDRVYAPNIQLLTGVGIAPIGFEILAGSCDLSESGSDRVRRV 180

Query: 181 MVEMARAMGTEGWIGGQFRGLEE---SATAEEVIEKTEGGLHARGSACGAILGGGSEEEI 240
           M EMARAMG+EGWIGGQF+ LEE   +A AEEVIEKTEG LHARG ACGAILG GSEEEI
Sbjct: 181 MGEMARAMGSEGWIGGQFKELEEVTAAAEAEEVIEKTEGELHARGGACGAILGSGSEEEI 240

Query: 241 EKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIGELKVLAFKELEDFKGEKVHEIYGFLD 300
           EKMRKYG++VGMVKG+SK VFGGKENERK+EKI ELK LAFKELE FKGEKV ++  F D
Sbjct: 241 EKMRKYGRIVGMVKGLSKKVFGGKENERKREKIKELKALAFKELEGFKGEKVDQMCNFFD 300

Query: 301 FEGL 302
           FEGL
Sbjct: 301 FEGL 304

[Close]

BLAST of HG10022461 vs. ExPASy TrEMBL
Match: A0A1S4DWU7 (heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC107990910 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 1.2e-105
Identity = 205/268 (76.49%), Postives = 223/268 (83.21%), Query Frame = 0


Query: 1   MAISLNLLQLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHL 60
           MAISLNLLQLQ N A PKFF+ N V PA Y R P RST+ MSQITPSYWAAINEDIEDHL
Sbjct: 1   MAISLNLLQLQPNLARPKFFQTNLVPPAPYVRPPPRSTVFMSQITPSYWAAINEDIEDHL 60

Query: 61  RRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAA 120
           RRVIP KDP AVYEPLGHFI SAPRNSA ALCIAACELVGGHRDQAMAAA A+QLIHAA 
Sbjct: 61  RRVIPVKDPLAVYEPLGHFILSAPRNSASALCIAACELVGGHRDQAMAAATAIQLIHAAT 120

Query: 121 YTHEYPPLTARAISRAAVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRV 180
            THEYPPLTA   +RAAVV+RVY  +IQL+TGDGIAP+ FEILA SCDWS  GSERVRRV
Sbjct: 121 CTHEYPPLTASG-TRAAVVERVYKPSIQLMTGDGIAPMGFEILAESCDWSERGSERVRRV 180

Query: 181 MVEMARAMGTEGWIGGQFRGLEESATAEEVIEKTEGGLHARGSACGAILGGGSEEEIEKM 240
           MVE++RAMGTEGWIGGQFRGL+E AT EEVIEK EGGLHA G ACGAI+GGG+EEEIEKM
Sbjct: 181 MVEVSRAMGTEGWIGGQFRGLDEEATVEEVIEKREGGLHACGGACGAIMGGGNEEEIEKM 240

Query: 241 RKYGKLVGMVKGMSKNVFGGKENERKKE 269
           RKYGKL+       +  +  +  ER+KE
Sbjct: 241 RKYGKLI------EERRWRNRRQERRKE 261

[Close]

BLAST of HG10022461 vs. ExPASy TrEMBL
Match: A0A2N9F8D7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11152 PE=3 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 2.2e-67
Identity = 145/300 (48.33%), Postives = 201/300 (67.00%), Query Frame = 0


Query: 9   QLQANPALPKFFKWNPVRPAVYFRAPTRSTIVMSQITPSYWAAINEDIEDHLRRVIPAKD 68
           +L  N       + + VRP++    P RS ++      SYWA++N +IE HL++ IP + 
Sbjct: 7   RLNGNQTFHILSRSSAVRPSL----PHRSMMITMSQNQSYWASVNSEIEAHLKQAIPLRP 66

Query: 69  PPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAYTHEYPPL 128
           P  V+EP+ H +F+AP+N+APALC+AACELVGGHRDQAMAAA AL L+HAA++THE+ PL
Sbjct: 67  PLQVFEPMHHLVFAAPQNTAPALCLAACELVGGHRDQAMAAASALHLMHAASFTHEHLPL 126

Query: 129 TARAISRA-AVVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRRVMVEMARA 188
           T R   ++  V+   YG NI+LL GD I P  FE+LA S D + + S+R+ RV +E+ RA
Sbjct: 127 TDRPRPKSRPVIHHAYGPNIELLLGDAIIPFGFELLARSDDPAQNNSDRILRVTIEITRA 186

Query: 189 MGTEGWIGGQFRGLE----------ESATAEEVIEKTEGGLHARGSACGAILGGGSEEEI 248
           MG++G + GQ+  LE          +    E+V +K EGGLHA G+ACGAILGGGSEEEI
Sbjct: 187 MGSQGMVEGQYYELECPQSDGEELCDVGWIEQVCKKKEGGLHACGAACGAILGGGSEEEI 246

Query: 249 EKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIGELKVLAFKELEDFKGEKVHEIYGFLD 298
           EK+R++G  VGM++GM      G++ +  KE + EL+ LA KELE+FKG KV  I  F++
Sbjct: 247 EKLRRFGLYVGMIQGMLHG--AGRKEKGLKEVVEELRNLALKELEEFKGRKVEAISSFVN 300

[Close]

BLAST of HG10022461 vs. TAIR 10
Match: AT4G38460.1 (geranylgeranyl reductase )

HSP 1 Score: 123.6 bits (309), Expect = 2.6e-28
Identity = 80/268 (29.85%), Postives = 134/268 (50.00%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFS-APRNSAPALCIAACELVGGHRDQ 106
           +YW  +  +I   L   IP K P  +YE + + + +   + + P +C+AACEL GG R  
Sbjct: 49  TYWTTLITEINQKLDEAIPVKHPAGIYEAMRYSVLAQGAKRAPPVMCVAACELFGGDRLA 108

Query: 107 AMAAAIALQLIHAAAYTH-EYPPLTARAISRAAVVDR-VYGRNIQLLTGDGIAPIVFEIL 166
           A   A AL+++HAA+  H + P +    + R    +  VYG  + +L GD + P+ F+ +
Sbjct: 109 AFPTACALEMVHAASLIHDDLPCMDDDPVRRGKPSNHTVYGSGMAILAGDALFPLAFQHI 168

Query: 167 AGSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQFRGLEESA-TAEEVIEKTEGGLHARG 226
                  +     + R++ E+AR +G+ G   GQ+  LE        V EK  G +    
Sbjct: 169 VSHTPPDLVPRATILRLITEIARTVGSTGMAAGQYVDLEGGPFPLSFVQEKKFGAMGECS 228

Query: 227 SACGAILGGGSEEEIEKMRKYGKLVGMVKGM-------SKNVFGGKENERKKEKIGELKV 286
           + CG +LGG +E+E++ +R+YG+ VGM+  +        K  + G   +   E   ELK 
Sbjct: 229 AVCGGLLGGATEDELQSLRRYGRAVGMLYQVVDDITEDKKKSYDGGAEKGMMEMAEELKE 288

Query: 287 LAFKELEDFK-----GEKVHEIYGFLDF 299
            A KEL+ F      G+ +  +Y F+D+
Sbjct: 289 KAKKELQVFDNKYGGGDTLVPLYTFVDY 316

[Close]

BLAST of HG10022461 vs. TAIR 10
Match: AT3G32040.1 (Terpenoid synthases superfamily protein )

HSP 1 Score: 112.8 bits (281), Expect = 4.7e-25
Identity = 80/245 (32.65%), Postives = 129/245 (52.65%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQA 106
           SY     E +   L   +P +DP A+ E + + + +  +   P LCIAACELVGG    A
Sbjct: 68  SYMIRKAESVSMALNVSVPPQDPLAIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATA 127

Query: 107 MAAAIALQLIHAAAYTHEYPPLTARAISRAA--VVDRVYGRNIQLLTGDGIAPIVFEILA 166
           M+AA A+++IH ++  H+  P    A  R       +V+G ++ +L GD +  + FE + 
Sbjct: 128 MSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAFEHMT 187

Query: 167 GSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQF-----RGLEESATAEEVIE-----KT 226
                 V+  ER+ R + E+A+A+GT+G + GQ      +GL       E +E     KT
Sbjct: 188 VVSSGLVA-PERMIRSVTELAKAIGTKGLVAGQVSDLCSQGLNPYDVGLERLEFIHLHKT 247

Query: 227 EGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIGELK 280
              L A  +  GAI+GGG+EEEI+K+RKYG+ +G++  +  ++    E+  +  K     
Sbjct: 248 AALLEA-AAVLGAIIGGGTEEEIQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAGKD 307

[Close]

BLAST of HG10022461 vs. TAIR 10
Match: AT4G36810.1 (geranylgeranyl pyrophosphate synthase 1 )

HSP 1 Score: 111.3 bits (277), Expect = 1.4e-24
Identity = 75/245 (30.61%), Postives = 129/245 (52.65%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQA 106
           SY     E +   L   +P ++P  ++E + + + +  +   P LCIAACELVGG    A
Sbjct: 78  SYIITKAELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCIAACELVGGEESTA 137

Query: 107 MAAAIALQLIHAAAYTH-EYPPLTARAISRAAVVD-RVYGRNIQLLTGDGIAPIVFEILA 166
           M AA A+++IH  +  H + P +    + R    + +V+G ++ +L GD +    FE LA
Sbjct: 138 MPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLA 197

Query: 167 GSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQF-----RGLEESATAEEVIE-----KT 226
            +    V    RV R + E+A+A+GTEG + GQ       GL+ +    E +E     KT
Sbjct: 198 SATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFIHLHKT 257

Query: 227 EGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIGELK 280
              L A  +  GAI+GGGS++EIE++RK+ + +G++  +  ++    ++ ++  K     
Sbjct: 258 AALLEA-SAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKD 317

[Close]

BLAST of HG10022461 vs. TAIR 10
Match: AT3G14510.1 (Polyprenyl synthetase family protein )

HSP 1 Score: 109.8 bits (273), Expect = 3.9e-24
Identity = 85/264 (32.20%), Postives = 132/264 (50.00%), Query Frame = 0


Query: 62  RVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQAMAAAIALQLIHAAAY 121
           R +P ++P  V E + + + +  +   P LCIA CELVGG    AM+AA A+++IH ++ 
Sbjct: 7   RSVPLREPLTVQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEATAMSAACAVEMIHTSSL 66

Query: 122 THEYPPLTARAISRAA--VVDRVYGRNIQLLTGDGIAPIVFEILAGSCDWSVSGSERVRR 181
            H+  P    A  R       +V+G ++ +L GD +  + FE +       V+ SER+ R
Sbjct: 67  IHDDLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVA-SERMIR 126

Query: 182 VMVEMARAMGTEGWIGGQFRGL-EESATAEEV---------IEKTEGGLHARGSACGAIL 241
            +VE+ARA+GT+G + GQ   L  E     +V         + KT   L A  +  GAI+
Sbjct: 127 AVVELARAIGTKGLVAGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEA-AAVIGAIM 186

Query: 242 GGGSEEEIEKMRKYGKLVGMV------------------KGMSKNVFGGKEN-------E 289
           GGG+EEEIEK+RKY + +G++                  K   K+V  GK         E
Sbjct: 187 GGGTEEEIEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLE 246

[Close]

BLAST of HG10022461 vs. TAIR 10
Match: AT3G29430.1 (Terpenoid synthases superfamily protein )

HSP 1 Score: 109.8 bits (273), Expect = 3.9e-24
Identity = 77/245 (31.43%), Postives = 129/245 (52.65%), Query Frame = 0


Query: 47  SYWAAINEDIEDHLRRVIPAKDPPAVYEPLGHFIFSAPRNSAPALCIAACELVGGHRDQA 106
           SY     E +   L   +P ++P  + E + + + +  +   P LCIAACELVGG    A
Sbjct: 65  SYMIRKAESVSAALNVSVPLQEPLTIQEAVRYSLLAGGKRVRPLLCIAACELVGGDEATA 124

Query: 107 MAAAIALQLIHAAAYTHEYPPLTARAISRAA--VVDRVYGRNIQLLTGDGIAPIVFEILA 166
           M+AA A+++IH ++  H+  P    A  R       + +G ++ +L GD +  + FE + 
Sbjct: 125 MSAACAVEMIHTSSLIHDDLPCMDDADLRRGKPTNHKEFGEDMAVLAGDALLALAFEHMT 184

Query: 167 GSCDWSVSGSERVRRVMVEMARAMGTEGWIGGQF-----RGLEESATAEEVIE-----KT 226
              +  V+  ER+ R ++E+A+A+GT+G + GQ      +GL       E +E     KT
Sbjct: 185 FVSNGLVA-PERMIRAVMELAKAIGTKGLVAGQVTDLCSQGLNPDDVGLERLEFIHLHKT 244

Query: 227 EGGLHARGSACGAILGGGSEEEIEKMRKYGKLVGMVKGMSKNVFGGKENERKKEKIGELK 280
              L A  +  GAI+GGG+EEEIEK+RKY + +G++  +  ++    E+ ++  K     
Sbjct: 245 AALLEA-AAVLGAIMGGGTEEEIEKLRKYARCIGLLFQVVDDILDVTESTKELGKTAGKD 304

The following BLAST results are available for this feature:

BLAST of HG10022461 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896497.1	1.7e-149	90.03	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
XP_023536167.1	9.8e-134	83.06	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
KAA0031902.1	2.0e-131	82.06	heterodimeric geranylgeranyl pyrophosphate synthase small subunit [Cucumis melo ...	[more]
XP_004139865.1	2.2e-130	81.88	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
XP_022975728.1	5.5e-129	80.26	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]

BLAST of HG10022461 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39108	3.7e-27	29.85	Heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
Q94ID7	3.5e-25	34.11	Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea brasiliensis OX=39...	[more]
Q9LHR4	6.6e-24	32.65	Geranylgeranyl pyrophosphate synthase 12, chloroplastic OS=Arabidopsis thaliana ...	[more]
P34802	1.9e-23	30.61	Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 1, chloroplast...	[more]
Q43133	4.3e-23	32.87	Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic OS=Sinapis al...	[more]

BLAST of HG10022461 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SLD5	9.9e-132	82.06	Heterodimeric geranylgeranyl pyrophosphate synthase small subunit OS=Cucumis mel...	[more]
A0A0A0K8P9	1.1e-130	81.88	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G211090 PE=4 SV=1	[more]
A0A6J1IK44	2.7e-129	80.26	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
A0A1S4DWU7	1.2e-105	76.49	heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic...	[more]
A0A2N9F8D7	2.2e-67	48.33	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11152 PE=3 SV=1	[more]

BLAST of HG10022461 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38460.1	2.6e-28	29.85	geranylgeranyl reductase	[more]
AT3G32040.1	4.7e-25	32.65	Terpenoid synthases superfamily protein	[more]
AT4G36810.1	1.4e-24	30.61	geranylgeranyl pyrophosphate synthase 1	[more]
AT3G14510.1	3.9e-24	32.20	Polyprenyl synthetase family protein	[more]
AT3G29430.1	3.9e-24	31.43	Terpenoid synthases superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008949	Isoprenoid synthase domain superfamily	GENE3D	1.10.600.10	Farnesyl Diphosphate Synthase	coord: 41..299 e-value: 1.2E-45 score: 157.7
IPR008949	Isoprenoid synthase domain superfamily	SUPERFAMILY	48576	Terpenoid synthases	coord: 47..250
None	No IPR available	PANTHER	PTHR43281	FARNESYL DIPHOSPHATE SYNTHASE	coord: 9..297
None	No IPR available	PANTHER	PTHR43281:SF6	HETERODIMERIC GERANYLGERANYL PYROPHOSPHATE SYNTHASE SMALL SUBUNIT, CHLOROPLASTIC-LIKE	coord: 9..297

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10022461.1	HG10022461.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0004659	prenyltransferase activity