HG10022449 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAACATTCACTCTTAATTTCCTGTGTTCTTGTTATAGTTCTGACCTTGCTAATCATAATGACCAGTGTTATGCTGAGAAACAAGCACTTGGGGAAGTGAGCGCGGAGCTCCTCGACACCCAAGTGAACCCAGCCGTTTGGGAGATAAGTGGTCACATGGTGTTGAAGAGGAAAAAGGATTACGAAGAGGCATCGGAGGAAAATGCGTGGAGGCTCCTCGCCGAGGTGTCCCTATCGGAAGAGAGATTTCAAGAAGTGTGTGCTCTCATCTTCGAAGTTATCGATATGGTTGATGCTGAAGATGCTGAAGGTAGCCCGAGCATGCCTGAGGAGCATGGTGATGCTTGTCTCAAGGATGTGGAAGCCAGAAACGCTTCCCGCCCACTCTCGGTGACTGGGACGAAGGAATGCTTAGTTTAG ATGATAACATTCACTCTTAATTTCCTGTGTTCTTGTTATAGTTCTGACCTTGCTAATCATAATGACCAGTGTTATGCTGAGAAACAAGCACTTGGGGAAGTGAGCGCGGAGCTCCTCGACACCCAAGTGAACCCAGCCGTTTGGGAGATAAGTGGTCACATGGTGTTGAAGAGGAAAAAGGATTACGAAGAGGCATCGGAGGAAAATGCGTGGAGGCTCCTCGCCGAGGTGTCCCTATCGGAAGAGAGATTTCAAGAAGTGTGTGCTCTCATCTTCGAAGTTATCGATATGGTTGATGCTGAAGATGCTGAAGGTAGCCCGAGCATGCCTGAGGAGCATGGTGATGCTTGTCTCAAGGATGTGGAAGCCAGAAACGCTTCCCGCCCACTCTCGGTGACTGGGACGAAGGAATGCTTAGTTTAG ATGATAACATTCACTCTTAATTTCCTGTGTTCTTGTTATAGTTCTGACCTTGCTAATCATAATGACCAGTGTTATGCTGAGAAACAAGCACTTGGGGAAGTGAGCGCGGAGCTCCTCGACACCCAAGTGAACCCAGCCGTTTGGGAGATAAGTGGTCACATGGTGTTGAAGAGGAAAAAGGATTACGAAGAGGCATCGGAGGAAAATGCGTGGAGGCTCCTCGCCGAGGTGTCCCTATCGGAAGAGAGATTTCAAGAAGTGTGTGCTCTCATCTTCGAAGTTATCGATATGGTTGATGCTGAAGATGCTGAAGGTAGCCCGAGCATGCCTGAGGAGCATGGTGATGCTTGTCTCAAGGATGTGGAAGCCAGAAACGCTTCCCGCCCACTCTCGGTGACTGGGACGAAGGAATGCTTAGTTTAG MITFTLNFLCSCYSSDLANHNDQCYAEKQALGEVSAELLDTQVNPAVWEISGHMVLKRKKDYEEASEENAWRLLAEVSLSEERFQEVCALIFEVIDMVDAEDAEGSPSMPEEHGDACLKDVEARNASRPLSVTGTKECLV Homology
BLAST of HG10022449 vs. NCBI nr
Match: XP_004139797.1 (GDP-L-galactose phosphorylase 1 [Cucumis sativus] >KGN44184.1 hypothetical protein Csa_015961 [Cucumis sativus]) HSP 1 Score: 208.4 bits (529), Expect = 4.1e-50 Identity = 106/119 (89.08%), Postives = 110/119 (92.44%), Query Frame = 0
BLAST of HG10022449 vs. NCBI nr
Match: XP_038897875.1 (GDP-L-galactose phosphorylase 2 [Benincasa hispida]) HSP 1 Score: 208.4 bits (529), Expect = 4.1e-50 Identity = 107/113 (94.69%), Postives = 109/113 (96.46%), Query Frame = 0
BLAST of HG10022449 vs. NCBI nr
Match: XP_023534897.1 (GDP-L-galactose phosphorylase 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 203.0 bits (515), Expect = 1.7e-48 Identity = 104/119 (87.39%), Postives = 111/119 (93.28%), Query Frame = 0
BLAST of HG10022449 vs. NCBI nr
Match: XP_022936265.1 (GDP-L-galactose phosphorylase 1-like [Cucurbita moschata]) HSP 1 Score: 202.2 bits (513), Expect = 2.9e-48 Identity = 105/119 (88.24%), Postives = 110/119 (92.44%), Query Frame = 0
BLAST of HG10022449 vs. NCBI nr
Match: KAG6592057.1 (GDP-L-galactose phosphorylase 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 202.2 bits (513), Expect = 2.9e-48 Identity = 105/119 (88.24%), Postives = 110/119 (92.44%), Query Frame = 0
BLAST of HG10022449 vs. ExPASy Swiss-Prot
Match: Q8RWE8 (GDP-L-galactose phosphorylase 1 OS=Arabidopsis thaliana OX=3702 GN=VTC2 PE=1 SV=1) HSP 1 Score: 131.3 bits (329), Expect = 8.3e-30 Identity = 69/118 (58.47%), Postives = 83/118 (70.34%), Query Frame = 0
BLAST of HG10022449 vs. ExPASy Swiss-Prot
Match: Q9FLP9 (GDP-L-galactose phosphorylase 2 OS=Arabidopsis thaliana OX=3702 GN=VTC5 PE=1 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 5.9e-28 Identity = 63/82 (76.83%), Postives = 70/82 (85.37%), Query Frame = 0
BLAST of HG10022449 vs. ExPASy TrEMBL
Match: A0A0A0K5F4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G219200 PE=3 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 2.0e-50 Identity = 106/119 (89.08%), Postives = 110/119 (92.44%), Query Frame = 0
BLAST of HG10022449 vs. ExPASy TrEMBL
Match: A0A6J1FD57 (GDP-L-galactose phosphorylase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111442936 PE=3 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 1.4e-48 Identity = 105/119 (88.24%), Postives = 110/119 (92.44%), Query Frame = 0
BLAST of HG10022449 vs. ExPASy TrEMBL
Match: A0A6J1J1Y3 (GDP-L-galactose phosphorylase 2-like OS=Cucurbita maxima OX=3661 GN=LOC111480581 PE=3 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 1.2e-47 Identity = 100/118 (84.75%), Postives = 109/118 (92.37%), Query Frame = 0
BLAST of HG10022449 vs. ExPASy TrEMBL
Match: A0A6J1FJ15 (GDP-L-galactose phosphorylase 2-like OS=Cucurbita moschata OX=3662 GN=LOC111446172 PE=3 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 1.2e-47 Identity = 100/118 (84.75%), Postives = 109/118 (92.37%), Query Frame = 0
BLAST of HG10022449 vs. ExPASy TrEMBL
Match: A0A1S3BIN8 (GDP-L-galactose phosphorylase 1 OS=Cucumis melo OX=3656 GN=LOC103490128 PE=3 SV=1) HSP 1 Score: 198.4 bits (503), Expect = 2.0e-47 Identity = 106/126 (84.13%), Postives = 108/126 (85.71%), Query Frame = 0
BLAST of HG10022449 vs. TAIR 10
Match: AT4G26850.1 (mannose-1-phosphate guanylyltransferase (GDP)s;GDP-galactose:mannose-1-phosphate guanylyltransferases;GDP-galactose:glucose-1-phosphate guanylyltransferases;GDP-galactose:myoinositol-1-phosphate guanylyltransferases;glucose-1-phosphate guanylyltransferase ) HSP 1 Score: 131.3 bits (329), Expect = 5.9e-31 Identity = 69/118 (58.47%), Postives = 83/118 (70.34%), Query Frame = 0
BLAST of HG10022449 vs. TAIR 10
Match: AT5G55120.1 (galactose-1-phosphate guanylyltransferase (GDP)s;GDP-D-glucose phosphorylases;quercetin 4'-O-glucosyltransferases ) HSP 1 Score: 125.2 bits (313), Expect = 4.2e-29 Identity = 63/82 (76.83%), Postives = 70/82 (85.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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