HG10022443 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10022443
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	GrpE protein homolog
Location	Chr05: 24354306 .. 24356562 (-)
RNA-Seq Expression	HG10022443
Synteny	HG10022443

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGTCTCGAGGATCCTCTTCCGAGCTTCCAGGAGCCTTCACCGGAGCTCGCCGATCCCATTTGGCAACCAACATTTTCCGATTCTCTACAGGCAGTTTCACGGTCTCGTTCATGAGATCTCCGGCAAGGTTGAGGTTCTAAAGCCGTGTTTTCAAAGGTTCTCTCCTCTGGGGTTTTAGTTAGGGTTTTTGCCATTGCATTGAGAAGGCACTATTTGATTCTTATTTATCGTATGCCCCTTTGTGGAAGCTTATTTGTTTTGTTTGCGATTGCGTAATCTTTTGTTTTATGGTCCTTTTACTTACTCTCTGGAAGATCTTTGATTCTTGTTCAATTGGGTTTAAAGAGAAGTATAGAGAATGTTTTCATAACTAAATTGAAAATTTGAGAGGTGATTTGATATGGATATGGAAGAACAGTTTTTGTTTGAATATTGTTGATGTAGCATTGTCTATATAACATGTATTTGCATTTCCCATCATGTTTTAATCCTGCCTTGTTCTTTGCTTTGGTATTTTTGGTGAGTTTTTGCTTACTTTTGGTAATTTGCTTCCTTTTCCAGTCTGCTCCAGTTCAGGTGTCTTTACTAAATCATATAGTCTTTAATCCTTTCACCTTCCAAAGATTTGGAGTATCTTCTACTACTATCCATGAATCTTCTGAAAATGAAGAGGGGAGTGCCAAACAAAGTAATAGTGGTTCTACAAATAAAGATCCTACAAAACATGGGAATTCTGAAATTTCTGATCAAGCAGAAGAATCGAGTTTTACGTTGGATTCCTCTTCCACCAAATCAAAATCAAGACGACAGAGTAGGCGGCCTGTACAAACTGCATTTTCGGATTCGGATTCCGAGAGTGATGAACGACCTTTCATGGATGATCTAGTAAAATCACTGGCACGGAAGGAAGAGCTTTTGAAGTCTAAGCACAAAGAGATTGAGAAAATGCAAGATAAAGTCCTCCGTTCTTATGCAGAAATGGAGAATGTTATGGACAGGACAAGACGTGAAGCAGAGAATTCAAAGAAGTTTGCCATTCAGGTTTCTTGATTGTTGTTCTCCTAATGCTATAAATTTTATGTCGGGTTTCATTCCGGTACTCATTTGTTTAAACATGAGCTAACGTGTGTTAACATATGCTTGACAGAATTTTGCAAAGAGTTTGCTTGATGTTGCTGACAACTTGGGAAGAGCTTCTTCTGTGGTTAAAGACAGTTTTTCAAAGATTAATGAATCTGAGGATTCAAGTGGAGCCGTACCTCTTCTAAAAACCCTTCTTGAAGGGGTTGATATGACCGAGAAACAGCTTATGGAGGTAAGCTTTCCATTTTGCATCAACATTGTGTAATTAGCATGAGCTATTCAACATTTCTAGAGGAAAACCACAAGTATTATCTGTTGTTCTGATGCTTAAAACACTTTTTCATCAGGTATTTAAGAAGTCCGGGGTAGAGAAATTTGACCCTACAAACGAGCCATTTGATCCGCATAAGCATTACGCTGTATTCCAAATACCGGATGGGTCTAAGCCAGACGGCACTGTTGCTATTGTCTTGAAGGTATTAGTTCAATTTGTAATCCTACAAATACCTCTAGAATTTGTGACCTAAGAAATGGGTAGTTTGGAGATAGTTCATATGCTAAGAAAAATTCATTGATCAAACCGGAAGGGGGACGATCTGTCTTTGAAACTAGTCACTAAGCTATAAACAAATTTGGCAATGTTAAGTTTGGTTGTTAGTCTCTGGGTTTCATGCTTAAACAAAAATCCTTTGGTCTAATGGGGTTTTTGTCCTTCTCTGGAGGCTTTGGTTTGAAAGAAACTCACGGATCTTTCGTGGCCATGATCTACCTCTAAATTCTTTTGTAATTATAGCCTAACTCATATTTACACCAATTGAGCTTCGTTTTTGTAGCTTCTTGGTGTATGCAGATATCTTATCTCCCACTCTTTTGTATCCTCCTTTTGATAATGAAAGTAAAGTTTCTTATAAAAGAAAAAGTTTGGTCGTTAGTAGGAGCAGCCATGTTAATTCATTATAATAGATATTTGCTTCCATTTTTTTTTTAAAGAACACGAAGTCGTCACTGTTTAGTTTAGGAGTTTGGTTTGATCGACATTGCATTGGTTGTGGAGATATATGATTTACTCATGTTCTATACAACAGTCCGGATATATGCTACACGATCGAGTTCTTCGGCCAGCCGAGGTCGGTGTGACTCAAGCAGTTGAAGATAATTCAACCGATTAA

mRNA sequence

ATGTCCGTCTCGAGGATCCTCTTCCGAGCTTCCAGGAGCCTTCACCGGAGCTCGCCGATCCCATTTGGCAACCAACATTTTCCGATTCTCTACAGGCAGTTTCACGGTCTCGTTCATGAGATCTCCGGCAAGGTTGAGTCTGCTCCAGTTCAGGTGTCTTTACTAAATCATATAGTCTTTAATCCTTTCACCTTCCAAAGATTTGGAGTATCTTCTACTACTATCCATGAATCTTCTGAAAATGAAGAGGGGAGTGCCAAACAAAGTAATAGTGGTTCTACAAATAAAGATCCTACAAAACATGGGAATTCTGAAATTTCTGATCAAGCAGAAGAATCGAGTTTTACGTTGGATTCCTCTTCCACCAAATCAAAATCAAGACGACAGAGTAGGCGGCCTGTACAAACTGCATTTTCGGATTCGGATTCCGAGAGTGATGAACGACCTTTCATGGATGATCTAGTAAAATCACTGGCACGGAAGGAAGAGCTTTTGAAGTCTAAGCACAAAGAGATTGAGAAAATGCAAGATAAAGTCCTCCGTTCTTATGCAGAAATGGAGAATGTTATGGACAGGACAAGACGTGAAGCAGAGAATTCAAAGAAGTTTGCCATTCAGAATTTTGCAAAGAGTTTGCTTGATGTTGCTGACAACTTGGGAAGAGCTTCTTCTGTGGTTAAAGACAGTTTTTCAAAGATTAATGAATCTGAGGATTCAAGTGGAGCCGTACCTCTTCTAAAAACCCTTCTTGAAGGGGTTGATATGACCGAGAAACAGCTTATGGAGGTATTTAAGAAGTCCGGGGTAGAGAAATTTGACCCTACAAACGAGCCATTTGATCCGCATAAGCATTACGCTGTATTCCAAATACCGGATGGGTCTAAGCCAGACGGCACTGTTGCTATTGTCTTGAAGTCCGGATATATGCTACACGATCGAGTTCTTCGGCCAGCCGAGGTCGGTGTGACTCAAGCAGTTGAAGATAATTCAACCGATTAA

Coding sequence (CDS)

ATGTCCGTCTCGAGGATCCTCTTCCGAGCTTCCAGGAGCCTTCACCGGAGCTCGCCGATCCCATTTGGCAACCAACATTTTCCGATTCTCTACAGGCAGTTTCACGGTCTCGTTCATGAGATCTCCGGCAAGGTTGAGTCTGCTCCAGTTCAGGTGTCTTTACTAAATCATATAGTCTTTAATCCTTTCACCTTCCAAAGATTTGGAGTATCTTCTACTACTATCCATGAATCTTCTGAAAATGAAGAGGGGAGTGCCAAACAAAGTAATAGTGGTTCTACAAATAAAGATCCTACAAAACATGGGAATTCTGAAATTTCTGATCAAGCAGAAGAATCGAGTTTTACGTTGGATTCCTCTTCCACCAAATCAAAATCAAGACGACAGAGTAGGCGGCCTGTACAAACTGCATTTTCGGATTCGGATTCCGAGAGTGATGAACGACCTTTCATGGATGATCTAGTAAAATCACTGGCACGGAAGGAAGAGCTTTTGAAGTCTAAGCACAAAGAGATTGAGAAAATGCAAGATAAAGTCCTCCGTTCTTATGCAGAAATGGAGAATGTTATGGACAGGACAAGACGTGAAGCAGAGAATTCAAAGAAGTTTGCCATTCAGAATTTTGCAAAGAGTTTGCTTGATGTTGCTGACAACTTGGGAAGAGCTTCTTCTGTGGTTAAAGACAGTTTTTCAAAGATTAATGAATCTGAGGATTCAAGTGGAGCCGTACCTCTTCTAAAAACCCTTCTTGAAGGGGTTGATATGACCGAGAAACAGCTTATGGAGGTATTTAAGAAGTCCGGGGTAGAGAAATTTGACCCTACAAACGAGCCATTTGATCCGCATAAGCATTACGCTGTATTCCAAATACCGGATGGGTCTAAGCCAGACGGCACTGTTGCTATTGTCTTGAAGTCCGGATATATGCTACACGATCGAGTTCTTCGGCCAGCCGAGGTCGGTGTGACTCAAGCAGTTGAAGATAATTCAACCGATTAA

Protein sequence

MSVSRILFRASRSLHRSSPIPFGNQHFPILYRQFHGLVHEISGKVESAPVQVSLLNHIVFNPFTFQRFGVSSTTIHESSENEEGSAKQSNSGSTNKDPTKHGNSEISDQAEESSFTLDSSSTKSKSRRQSRRPVQTAFSDSDSESDERPFMDDLVKSLARKEELLKSKHKEIEKMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINESEDSSGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKPDGTVAIVLKSGYMLHDRVLRPAEVGVTQAVEDNSTD

Homology

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BLAST of HG10022443 vs. NCBI nr
Match: XP_038898199.1 (grpE protein homolog 2, mitochondrial-like [Benincasa hispida])

HSP 1 Score: 548.1 bits (1411), Expect = 5.1e-152
Identity = 298/332 (89.76%), Postives = 313/332 (94.28%), Query Frame = 0


Query: 1   MSVSRILFRASRSLHRSSPIPFGNQHFPILYRQFHGLVHEISGKVESAPVQVSLLNHIVF 60
           MSVSRILFRASRSLHRSSPI +G Q FPILYRQFHGLVHEISGK  SAPVQVSLLNHIV+
Sbjct: 39  MSVSRILFRASRSLHRSSPILYGYQTFPILYRQFHGLVHEISGK--SAPVQVSLLNHIVY 98

Query: 61  NPFTFQRFGVSSTTIHESSENEEGSAKQSNSGSTNKDPTKHGNSEISDQAEESSFTLDSS 120
           NPF FQRFGVSST IHESSEN EGSAK  +SGSTN  PTKHGNSE+SD+AEES+FTLDS 
Sbjct: 99  NPFPFQRFGVSSTAIHESSEN-EGSAK--HSGSTNNGPTKHGNSEVSDRAEESTFTLDSH 158

Query: 121 STKSKSRRQSRRPVQTAFSDSDSESDERPFMDDLVKSLARKEELLKSKHKEIEKMQDKVL 180
           STKSKSRR+SRR V+TAFSDSDSESDE+P MDDLVKSLARKEELLKSKHKE+EKMQDKVL
Sbjct: 159 STKSKSRRRSRRSVRTAFSDSDSESDEQPSMDDLVKSLARKEELLKSKHKELEKMQDKVL 218

Query: 181 RSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINESEDSS 240
           RSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINES+DSS
Sbjct: 219 RSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINESQDSS 278

Query: 241 GAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKPDGTV 300
           GAVPLLK+LLEGVDMTEKQLME F K GVEKFDPT+EPFDPHKH+AVFQIPDGSKPDGTV
Sbjct: 279 GAVPLLKSLLEGVDMTEKQLMEAFTKFGVEKFDPTSEPFDPHKHFAVFQIPDGSKPDGTV 338

Query: 301 AIVLKSGYMLHDRVLRPAEVGVTQAVEDNSTD 333
           AIVLKSGYMLHDRVLRPAEVGVTQA EDNST+
Sbjct: 339 AIVLKSGYMLHDRVLRPAEVGVTQAAEDNSTN 365

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BLAST of HG10022443 vs. NCBI nr
Match: KAG7024936.1 (grpE, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 513.1 bits (1320), Expect = 1.8e-141
Identity = 284/337 (84.27%), Postives = 297/337 (88.13%), Query Frame = 0


Query: 1   MSVSRILFRASRSLHRSSPIPFGNQH-----FPILYRQFHGLVHEISGKVESAPVQVSLL 60
           MS  RILFRASRSLH+SSPI  GNQ      FPILYRQFHGLV EISGKVESAPV VSLL
Sbjct: 1   MSSFRILFRASRSLHQSSPILIGNQSQNCRTFPILYRQFHGLVDEISGKVESAPVHVSLL 60

Query: 61  NHIVFNPFTFQRFGVSSTTIHESSENEEGSAKQSNSGSTNKDPTKHGNSEISDQAEESSF 120
           NHIV NPF FQR GVSST  HESSENEEGSAKQ N            NSE+S+QAEE S 
Sbjct: 61  NHIVSNPFPFQRLGVSSTASHESSENEEGSAKQDNV-----------NSEVSNQAEELSS 120

Query: 121 TLDSSSTKSKSRRQSRRPVQTAFSDSDSESDERPFMDDLVKSLARKEELLKSKHKEIEKM 180
           T DS STKSKSRRQ RR ++TAFS+SDSESDE+P MDDLVKSLARKEELLKSKHKEI+KM
Sbjct: 121 TTDSHSTKSKSRRQRRRTIRTAFSESDSESDEQPSMDDLVKSLARKEELLKSKHKEIDKM 180

Query: 181 QDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINE 240
           Q+KVL SYAEMENVMDRT+REAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKI+E
Sbjct: 181 QEKVLCSYAEMENVMDRTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKIDE 240

Query: 241 SEDSSGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSK 300
           SED SGAV LLKTLLEGVDMTEKQLMEVFKKSGVEKFDPT+EPFDPHKHYAVFQIPDGSK
Sbjct: 241 SEDPSGAVALLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTSEPFDPHKHYAVFQIPDGSK 300

Query: 301 PDGTVAIVLKSGYMLHDRVLRPAEVGVTQAVEDNSTD 333
           PDGTVA+VLKSGYMLHDRVLRPAEVGVTQAVEDNSTD
Sbjct: 301 PDGTVAVVLKSGYMLHDRVLRPAEVGVTQAVEDNSTD 326

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BLAST of HG10022443 vs. NCBI nr
Match: KAG6592058.1 (Transcriptional adapter ADA2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 504.2 bits (1297), Expect = 8.5e-139
Identity = 282/337 (83.68%), Postives = 295/337 (87.54%), Query Frame = 0


Query: 1   MSVSRILFRASRSLHRSSPIPFGNQH-----FPILYRQFHGLVHEISGKVESAPVQVSLL 60
           MS  RILFRASRSLH+SSPI  GNQ      FPILYRQFHGLV EISGK  SAPV VSLL
Sbjct: 587 MSSFRILFRASRSLHQSSPILIGNQSQNCRTFPILYRQFHGLVDEISGK--SAPVHVSLL 646

Query: 61  NHIVFNPFTFQRFGVSSTTIHESSENEEGSAKQSNSGSTNKDPTKHGNSEISDQAEESSF 120
           NHIV NPF FQR GVSST  HESSENEEGSAKQ N            NSE+S+QAEE S 
Sbjct: 647 NHIVSNPFPFQRLGVSSTASHESSENEEGSAKQDNV-----------NSEVSNQAEELSS 706

Query: 121 TLDSSSTKSKSRRQSRRPVQTAFSDSDSESDERPFMDDLVKSLARKEELLKSKHKEIEKM 180
           T DS STKSKSRRQ RR ++TAFSDSDSES+E+P MDDLVKSLARKEELLKSKHKEI+KM
Sbjct: 707 TTDSHSTKSKSRRQRRRTIRTAFSDSDSESNEQPSMDDLVKSLARKEELLKSKHKEIDKM 766

Query: 181 QDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINE 240
           Q+KVL SYAEMENVMDRT+REAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKI+E
Sbjct: 767 QEKVLCSYAEMENVMDRTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKIDE 826

Query: 241 SEDSSGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSK 300
           SED SGAV LLKTLLEGVDMTEKQLMEVFKKSGVEKFDPT+EPFDPHKHYAVFQIPDGSK
Sbjct: 827 SEDPSGAVALLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTSEPFDPHKHYAVFQIPDGSK 886

Query: 301 PDGTVAIVLKSGYMLHDRVLRPAEVGVTQAVEDNSTD 333
           PDGTVA+VLKSGYMLHDRVLRPAEVGVTQAVEDNSTD
Sbjct: 887 PDGTVAVVLKSGYMLHDRVLRPAEVGVTQAVEDNSTD 910

[Close]

BLAST of HG10022443 vs. NCBI nr
Match: XP_022936267.1 (grpE protein homolog 2, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 500.0 bits (1286), Expect = 1.6e-137
Identity = 281/337 (83.38%), Postives = 293/337 (86.94%), Query Frame = 0


Query: 1   MSVSRILFRASRSLHRSSPIPFGNQH-----FPILYRQFHGLVHEISGKVESAPVQVSLL 60
           MS  RIL RASRSLH+SSPI   NQ      FPILYRQFHGLV EISGK  SAPV VSLL
Sbjct: 1   MSSFRILVRASRSLHQSSPILIRNQSQNCRTFPILYRQFHGLVDEISGK--SAPVHVSLL 60

Query: 61  NHIVFNPFTFQRFGVSSTTIHESSENEEGSAKQSNSGSTNKDPTKHGNSEISDQAEESSF 120
           NHIV NPF FQRFGVSST  HESSENEEGSAKQ +            NSE+S+QAEE S 
Sbjct: 61  NHIVSNPFPFQRFGVSSTASHESSENEEGSAKQDDV-----------NSEVSNQAEELSS 120

Query: 121 TLDSSSTKSKSRRQSRRPVQTAFSDSDSESDERPFMDDLVKSLARKEELLKSKHKEIEKM 180
           T DS STKSKSRRQ RR ++TAFSDSDSE DE+P MDDLVKSLARKEELLKSKHKEIEKM
Sbjct: 121 TTDSHSTKSKSRRQRRRTIRTAFSDSDSECDEQPSMDDLVKSLARKEELLKSKHKEIEKM 180

Query: 181 QDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINE 240
           Q+KVL SYAEMENVMDRT+REAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKI+E
Sbjct: 181 QEKVLCSYAEMENVMDRTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKIDE 240

Query: 241 SEDSSGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSK 300
           SED SGAV LLKTLLEGVDMTEKQLMEVFKKSGVEKFDPT+EPFDPHKHYAVFQIPDGSK
Sbjct: 241 SEDPSGAVALLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTSEPFDPHKHYAVFQIPDGSK 300

Query: 301 PDGTVAIVLKSGYMLHDRVLRPAEVGVTQAVEDNSTD 333
           PDGTVA+VLKSGYMLHDRVLRPAEVGVTQAVEDNSTD
Sbjct: 301 PDGTVAVVLKSGYMLHDRVLRPAEVGVTQAVEDNSTD 324

[Close]

BLAST of HG10022443 vs. NCBI nr
Match: XP_023536002.1 (grpE protein homolog 2, mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 498.4 bits (1282), Expect = 4.7e-137
Identity = 279/334 (83.53%), Postives = 291/334 (87.13%), Query Frame = 0


Query: 1   MSVSRILFRASRSLHRSSPIPFGNQH-----FPILYRQFHGLVHEISGKVESAPVQVSLL 60
           MS S ILFRASRSLHRSSPI  GNQ      FPILYRQFHGLV EISGK  SAPV VSLL
Sbjct: 1   MSSSSILFRASRSLHRSSPILIGNQSQNCRTFPILYRQFHGLVDEISGK--SAPVHVSLL 60

Query: 61  NHIVFNPFTFQRFGVSSTTIHESSENEEGSAKQSNSGSTNKDPTKHGNSEISDQAEESSF 120
           NHIVFNPF FQRFG+SST  HESSENEE SAKQ              NSE+S+QAEE S 
Sbjct: 61  NHIVFNPFPFQRFGLSSTASHESSENEERSAKQGTV-----------NSEVSNQAEELSS 120

Query: 121 TLDSSSTKSKSRRQSRRPVQTAFSDSDSESDERPFMDDLVKSLARKEELLKSKHKEIEKM 180
           T DS STKSKSRRQ RR ++TAFS+SDSESDE+P MDDLVKSL RKEELLKSKHKEIEKM
Sbjct: 121 TTDSHSTKSKSRRQRRRTIRTAFSNSDSESDEQPSMDDLVKSLTRKEELLKSKHKEIEKM 180

Query: 181 QDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINE 240
           Q+KVL SYAEMENVMDRT+REAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKI+E
Sbjct: 181 QEKVLCSYAEMENVMDRTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKIDE 240

Query: 241 SEDSSGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSK 300
           SED SGAV LLKTLLEGVDMTEKQLMEVFKKSGVEKFDPT+EPFDPHKHYAVFQIPDGSK
Sbjct: 241 SEDPSGAVALLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTSEPFDPHKHYAVFQIPDGSK 300

Query: 301 PDGTVAIVLKSGYMLHDRVLRPAEVGVTQAVEDN 330
           PDGTVA+VLKSGYMLHDRVLRPAEVGVTQAVEDN
Sbjct: 301 PDGTVAVVLKSGYMLHDRVLRPAEVGVTQAVEDN 321

[Close]

BLAST of HG10022443 vs. ExPASy Swiss-Prot
Match: Q8LB47 (GrpE protein homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge2 PE=1 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 6.4e-81
Identity = 186/334 (55.69%), Postives = 238/334 (71.26%), Query Frame = 0


Query: 1   MSVSRILFRASRSLH-RSS----PIPFGNQHFPILYRQFHGLVHEISGKVESAPVQVSLL 60
           M V RIL R +R+   RSS     +P  NQ  P+   +FH L H+ S K+   P Q+S++
Sbjct: 1   MLVLRILSRVTRNAGIRSSLSAVTLPARNQ-TPVFSSRFHSLAHDFSHKL--VPAQMSMM 60

Query: 61  NHIVFNPFTFQRFGVSSTTIHESSENEEGSAKQSNSGSTNKDPTKHGNSEISDQAEESSF 120
                + F  QRF  SS+T   S E++E       S ++ + PT   N     Q    S 
Sbjct: 61  -----DSFALQRFNFSSST---SPESDEKKTHTEASKTSEEKPTAEAN-----QPGLDSE 120

Query: 121 TLDSSSTKSKSRRQSRRPVQTAFSDSDSESDERPF-MDDLVKSLARKEELLKSKHKEIEK 180
           + DS +  +K +R+  +   ++ S+SDSESD+     DDLVK +A KEELL  K +EI++
Sbjct: 121 SKDSVTDSAKRKRKGAKGAASSSSESDSESDDDELSADDLVKLVAEKEELLSEKEEEIKQ 180

Query: 181 MQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKIN 240
           ++DKVLR+YAEMENVMDRTRR+AEN+KK+A+QNFAKSLLDVADNLGRASSVVK+SFSK++
Sbjct: 181 LKDKVLRTYAEMENVMDRTRRDAENTKKYAVQNFAKSLLDVADNLGRASSVVKESFSKLD 240

Query: 241 ESEDSSGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHYAVFQIPDGS 300
            SEDS+GA PLLKTLLEGV+MTEKQL EVFKK G+EK+DP NEPFDP++H AVFQ+PD S
Sbjct: 241 TSEDSAGAAPLLKTLLEGVEMTEKQLAEVFKKFGMEKYDPINEPFDPNRHNAVFQVPDAS 300

Query: 301 KPDGTVAIVLKSGYMLHDRVLRPAEVGVTQAVED 329
           KP+GTVA VLKSGY L+DRV+RPAEVGVTQ  E+
Sbjct: 301 KPEGTVAHVLKSGYTLYDRVIRPAEVGVTQGGEN 318

[Close]

BLAST of HG10022443 vs. ExPASy Swiss-Prot
Match: Q9FLP3 (GrpE protein homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge1 PE=2 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.4e-67
Identity = 165/332 (49.70%), Postives = 210/332 (63.25%), Query Frame = 0


Query: 1   MSVSRILFRASRSL----HRSSPIPFGNQHFPILYRQFHGLVHEISGKVESAPVQVSLLN 60
           M VSR+L R SRS       SS +       PI+  +FH LVH    K+ + P  VSL N
Sbjct: 1   MLVSRVLSRVSRSAGLRSSFSSVVTPKRNQIPIVASRFHSLVHGTPNKLVAVP--VSLRN 60

Query: 61  HIVFNPFTFQRFGVSSTTIHESSENEEGSAKQSNSGSTNKDPTKHGNSEISDQAEESSFT 120
           H   +    QRFG  S++  E   NE           +N +  K G  E S+  E    T
Sbjct: 61  HGTLDLNVLQRFGFFSSSSAEPKGNE-----------SNTEVPKTG--ETSENVEVGKAT 120

Query: 121 LDSSSTKSKSRRQSRRPVQTAFSDSDSESDERPFMDDLVKSLARKEELLKSKHKEIEKMQ 180
                                  D++ + D+    DDLVK ++ KE+LLK + K+I +M+
Sbjct: 121 -----------------------DAEIDFDDLS-RDDLVKLVSEKEDLLKVQQKDIMEMK 180

Query: 181 DKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINES 240
           DK LR+YAE +N+MDRT R AE++KKFA+QNFA SLLDVADNL RASSVVK+SFSKI+ S
Sbjct: 181 DKFLRTYAEQQNLMDRTNRNAESAKKFAVQNFATSLLDVADNLERASSVVKESFSKIDTS 240

Query: 241 EDSSGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKP 300
           +D +GA PLLK LLEGV+MTEKQL EVF+K+G+ K DP NEPF+P++H AVFQ+PD SKP
Sbjct: 241 KDLAGATPLLKNLLEGVEMTEKQLAEVFRKAGLVKEDPLNEPFNPNRHNAVFQVPDASKP 293

Query: 301 DGTVAIVLKSGYMLHDRVLRPAEVGVTQAVED 329
            GT+A VLKSGY L+DRV+RPAEVGVT AVE+
Sbjct: 301 KGTIAHVLKSGYSLYDRVIRPAEVGVTCAVEN 293

[Close]

BLAST of HG10022443 vs. ExPASy Swiss-Prot
Match: A4YJR1 (Protein GrpE OS=Bradyrhizobium sp. (strain ORS 278) OX=114615 GN=grpE PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.2e-29
Identity = 69/155 (44.52%), Postives = 106/155 (68.39%), Query Frame = 0


Query: 170 KEIEKMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDS 229
           KE  + +DK+LR+ AEMEN+  RT RE  +++ + I  FA+ +LD+ADNL RA   V   
Sbjct: 42  KEAAEARDKMLRTLAEMENLRKRTAREVADARMYGITGFARDVLDIADNLQRALDAV--- 101

Query: 230 FSKINESEDSSGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHYAVFQ 289
                 +E  + A   LK+L+EGV++TE+ L+   +K+GV+KFDPT + FDP+   A+++
Sbjct: 102 -----PAETRANADAGLKSLIEGVELTERSLLNTLEKNGVKKFDPTGQKFDPNFQQAMYE 161

Query: 290 IPDGSKPDGTVAIVLKSGYMLHDRVLRPAEVGVTQ 325
           +PD S P GTV  V+++G+M+ +RVLRPA VGV++
Sbjct: 162 VPDPSVPSGTVVQVVQAGFMIGERVLRPALVGVSK 188

[Close]

BLAST of HG10022443 vs. ExPASy Swiss-Prot
Match: Q3SW78 (Protein GrpE OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 104748 / NCIMB 11846 / Nb-255) OX=323098 GN=grpE PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.2e-29
Identity = 69/164 (42.07%), Postives = 109/164 (66.46%), Query Frame = 0


Query: 161 KEELLKSKHKEIEKMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLG 220
           +++ L + +K++ + +D+ LR+ AEMEN+  RT RE  +++ + I  FA+ +L++ADNL 
Sbjct: 33  EDDALDALNKQLAEAKDRTLRTLAEMENLRKRTAREVSDARTYGISGFARDVLEIADNLQ 92

Query: 221 RASSVVKDSFSKINESEDSSGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFD 280
           RA   V         ++  +   P LK L+EGV++TE+ L    +K GV+KFDP  E FD
Sbjct: 93  RALDAV--------PADARAAPDPGLKALIEGVELTERSLHNALEKHGVKKFDPAGEKFD 152

Query: 281 PHKHYAVFQIPDGSKPDGTVAIVLKSGYMLHDRVLRPAEVGVTQ 325
           P+ H A++++PD S P GTVA V+++GYM+ +RVLRPA VGV +
Sbjct: 153 PNVHQAMYEVPDPSIPVGTVAQVIQAGYMIGERVLRPALVGVAK 188

[Close]

BLAST of HG10022443 vs. ExPASy Swiss-Prot
Match: B6JCI1 (Protein GrpE OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC 32145 / OM5) OX=504832 GN=grpE PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 1.2e-29
Identity = 70/156 (44.87%), Postives = 104/156 (66.67%), Query Frame = 0


Query: 170 KEIEKMQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDS 229
           KE  + +D++LR+ AEMEN+  RT+RE  +++ + I  FA+ +L++ADNL RA   V   
Sbjct: 47  KEAAEAKDRMLRTLAEMENLRKRTQREVADARAYGIAGFARDVLEIADNLQRALDAV--- 106

Query: 230 FSKINESEDSSGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHYAVFQ 289
                 +E  + A P L  L+EGV++TE+ L    +K+GV+K D   E FDP+ H A+F+
Sbjct: 107 -----PAEARAAADPGLTALIEGVELTERSLHRALEKNGVKKLDAAGEKFDPNIHQAMFE 166

Query: 290 IPDGSKPDGTVAIVLKSGYMLHDRVLRPAEVGVTQA 326
           +PD S P GTV  V+++GYM+ DRVLRPA VGV++A
Sbjct: 167 VPDNSVPPGTVVQVIQTGYMIGDRVLRPALVGVSKA 194

[Close]

BLAST of HG10022443 vs. ExPASy TrEMBL
Match: A0A6J1F7Z2 (GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111442938 PE=3 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 7.8e-138
Identity = 281/337 (83.38%), Postives = 293/337 (86.94%), Query Frame = 0


Query: 1   MSVSRILFRASRSLHRSSPIPFGNQH-----FPILYRQFHGLVHEISGKVESAPVQVSLL 60
           MS  RIL RASRSLH+SSPI   NQ      FPILYRQFHGLV EISGK  SAPV VSLL
Sbjct: 1   MSSFRILVRASRSLHQSSPILIRNQSQNCRTFPILYRQFHGLVDEISGK--SAPVHVSLL 60

Query: 61  NHIVFNPFTFQRFGVSSTTIHESSENEEGSAKQSNSGSTNKDPTKHGNSEISDQAEESSF 120
           NHIV NPF FQRFGVSST  HESSENEEGSAKQ +            NSE+S+QAEE S 
Sbjct: 61  NHIVSNPFPFQRFGVSSTASHESSENEEGSAKQDDV-----------NSEVSNQAEELSS 120

Query: 121 TLDSSSTKSKSRRQSRRPVQTAFSDSDSESDERPFMDDLVKSLARKEELLKSKHKEIEKM 180
           T DS STKSKSRRQ RR ++TAFSDSDSE DE+P MDDLVKSLARKEELLKSKHKEIEKM
Sbjct: 121 TTDSHSTKSKSRRQRRRTIRTAFSDSDSECDEQPSMDDLVKSLARKEELLKSKHKEIEKM 180

Query: 181 QDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINE 240
           Q+KVL SYAEMENVMDRT+REAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKI+E
Sbjct: 181 QEKVLCSYAEMENVMDRTKREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKIDE 240

Query: 241 SEDSSGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSK 300
           SED SGAV LLKTLLEGVDMTEKQLMEVFKKSGVEKFDPT+EPFDPHKHYAVFQIPDGSK
Sbjct: 241 SEDPSGAVALLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTSEPFDPHKHYAVFQIPDGSK 300

Query: 301 PDGTVAIVLKSGYMLHDRVLRPAEVGVTQAVEDNSTD 333
           PDGTVA+VLKSGYMLHDRVLRPAEVGVTQAVEDNSTD
Sbjct: 301 PDGTVAVVLKSGYMLHDRVLRPAEVGVTQAVEDNSTD 324

[Close]

BLAST of HG10022443 vs. ExPASy TrEMBL
Match: A0A6J1CCY7 (GrpE protein homolog OS=Momordica charantia OX=3673 GN=LOC111010351 PE=3 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 3.2e-131
Identity = 269/333 (80.78%), Postives = 291/333 (87.39%), Query Frame = 0


Query: 1   MSVSRILFRAS-RSLHRSSPIPFGNQHFPILYRQFHGLVHEISGKVESAPVQVSLLNHIV 60
           MSVSR+LFRAS RSL RSS         PIL +QF GLVHE SGK   APVQVSLL+HIV
Sbjct: 1   MSVSRVLFRASTRSLRRSS---------PILSKQFRGLVHETSGKF--APVQVSLLHHIV 60

Query: 61  FNPFTFQRFGVSSTTIHESSENEEGSAKQSNSGSTNKDPTKHGNSEISDQAEESSFTLDS 120
           FNPF FQ+FG+SSTT HESSEN+EGSAKQS + ST KDPTK  NSE+SDQA E + T +S
Sbjct: 61  FNPFPFQKFGISSTTSHESSENKEGSAKQSKNYSTTKDPTKDENSEVSDQAGELNSTSNS 120

Query: 121 SSTKSKSRRQSRRPVQTAFSDSDSESDERPFMDDLVKSLARKEELLKSKHKEIEKMQDKV 180
            STKSKSR+  RR ++TAFSDSDSE  E+P MDDLVKSLARKEELLKSKHKEI+KMQDKV
Sbjct: 121 HSTKSKSRQWRRRTIRTAFSDSDSEGCEQPSMDDLVKSLARKEELLKSKHKEIKKMQDKV 180

Query: 181 LRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINESEDS 240
           LRSYAEMENV DRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKI ESEDS
Sbjct: 181 LRSYAEMENVKDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKIKESEDS 240

Query: 241 SGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKPDGT 300
           SGAVPLLKTLLEGVDMTEKQL++VFKKSGVEKFDPT+EPFDPH+H AVFQI DGSKPDGT
Sbjct: 241 SGAVPLLKTLLEGVDMTEKQLVQVFKKSGVEKFDPTSEPFDPHRHNAVFQISDGSKPDGT 300

Query: 301 VAIVLKSGYMLHDRVLRPAEVGVTQAVEDNSTD 333
           VAIVLKSGYML+DRVLRPAEVGVT+A E N +D
Sbjct: 301 VAIVLKSGYMLYDRVLRPAEVGVTRAAESNPSD 322

[Close]

BLAST of HG10022443 vs. ExPASy TrEMBL
Match: M5WTU3 (GrpE protein homolog OS=Prunus persica OX=3760 GN=PRUPE_4G223200 PE=3 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 7.9e-98
Identity = 212/336 (63.10%), Postives = 259/336 (77.08%), Query Frame = 0


Query: 1   MSVSRILFRASRSLHRSSPIPFG--NQHFPILYRQFHGLVHEISGKVESAPVQVSLLNHI 60
           M VSR+L RASR+L RS+ +     N H PIL  Q   L+H+ S  ++ +P QVSLL+H 
Sbjct: 1   MFVSRVLSRASRTLPRSTMLIAAPQNHHLPILCNQSQALIHDFS--IKFSPRQVSLLHHS 60

Query: 61  VFNPFTFQRFGVSSTTIHESSENEEGSAKQSNSGSTNKDPTKH-GNSEISDQAEESSFTL 120
             +    Q FG SS+   + SE E GSA ++   STN +P K  G++++SDQ +ES +T 
Sbjct: 61  TPSSSISQIFGFSSSASPQPSEREHGSAAENGGASTNGEPAKESGDAKVSDQTKESGYTS 120

Query: 121 DSSSTKSKS-RRQSRRPVQTAFSDSDSESDERPFMDDLVKSLARKEELLKSKHKEIEKMQ 180
           DS S KS S +R+     +TAFSDSDSE +     DDLVK +A KEELLK KH+EI++MQ
Sbjct: 121 DSQSKKSPSVKRRRGGTKRTAFSDSDSEGEGDLGFDDLVKLVAEKEELLKQKHEEIKRMQ 180

Query: 181 DKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINES 240
           DKVLRSYAEMENVMDRTRREAENSKKFA+QNFAKSLLDVADNLGRASSVVKDSFSK++ES
Sbjct: 181 DKVLRSYAEMENVMDRTRREAENSKKFAVQNFAKSLLDVADNLGRASSVVKDSFSKLDES 240

Query: 241 EDSSGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKP 300
           ++S GA PLLKTLLEGV+MTEKQL+EVF+K GVEKFDPTNE FDP+KH AVF + D SKP
Sbjct: 241 KESGGAAPLLKTLLEGVEMTEKQLIEVFRKYGVEKFDPTNEAFDPNKHNAVFNLEDASKP 300

Query: 301 DGTVAIVLKSGYMLHDRVLRPAEVGVTQAVEDNSTD 333
            GT+A+VLK GYML+DRV+RPAEVGVT A E+N+T+
Sbjct: 301 PGTIAVVLKPGYMLYDRVVRPAEVGVTTAPENNATE 334

[Close]

BLAST of HG10022443 vs. ExPASy TrEMBL
Match: A0A5E4FCQ4 (GrpE protein homolog OS=Prunus dulcis OX=3755 GN=ALMOND_2B019776 PE=3 SV=1)

HSP 1 Score: 367.1 bits (941), Expect = 7.9e-98
Identity = 212/336 (63.10%), Postives = 259/336 (77.08%), Query Frame = 0


Query: 1   MSVSRILFRASRSLHRSSPIPFG--NQHFPILYRQFHGLVHEISGKVESAPVQVSLLNHI 60
           M VSR+L RASR+L RS+ +     N H PIL  Q   L+H+ S  ++ +P QVSLL+H 
Sbjct: 1   MFVSRVLSRASRTLPRSTMLIAAPQNHHLPILCNQSQALIHDFS--IKFSPRQVSLLHHS 60

Query: 61  VFNPFTFQRFGVSSTTIHESSENEEGSAKQSNSGSTNKDPTKH-GNSEISDQAEESSFTL 120
             +    Q FG SS+   + SE E GSA ++   STN +P K  G++++SDQ +ES +T 
Sbjct: 61  TPSSSISQIFGFSSSASPQPSEREHGSAAENGGASTNGEPAKESGDAKVSDQTKESGYTS 120

Query: 121 DSSSTKSKS-RRQSRRPVQTAFSDSDSESDERPFMDDLVKSLARKEELLKSKHKEIEKMQ 180
           DS S KS S +R+     +TAFSDSDSE +     DDLVK +A KEELLK KH+EI++MQ
Sbjct: 121 DSQSKKSPSVKRRRGGTKRTAFSDSDSEGEGDLGFDDLVKLVAEKEELLKQKHEEIKRMQ 180

Query: 181 DKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINES 240
           DKVLRSYAEMENVMDRTRREAENSKKFA+QNFAKSLLDVADNLGRASSVVKDSFSK++ES
Sbjct: 181 DKVLRSYAEMENVMDRTRREAENSKKFAVQNFAKSLLDVADNLGRASSVVKDSFSKLDES 240

Query: 241 EDSSGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKP 300
           ++S GA PLLKTLLEGV+MTEKQL+EVF+K GVEKFDPTNE FDP+KH AVF + D SKP
Sbjct: 241 KESGGAAPLLKTLLEGVEMTEKQLIEVFRKYGVEKFDPTNEAFDPNKHNAVFNLEDASKP 300

Query: 301 DGTVAIVLKSGYMLHDRVLRPAEVGVTQAVEDNSTD 333
            GT+A+VLK GYML+DRV+RPAEVGVT A E+N+T+
Sbjct: 301 PGTIAVVLKPGYMLYDRVVRPAEVGVTTAPENNATE 334

[Close]

BLAST of HG10022443 vs. ExPASy TrEMBL
Match: A0A6J5X7K4 (GrpE protein homolog OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS28266 PE=3 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 1.3e-97
Identity = 212/336 (63.10%), Postives = 259/336 (77.08%), Query Frame = 0


Query: 1   MSVSRILFRASRSLHRSSPIPFG--NQHFPILYRQFHGLVHEISGKVESAPVQVSLLNHI 60
           M VSR+L RASR+L RS+ +     N H PIL  Q   L+H+ S  ++ +P QVSLL+H 
Sbjct: 1   MFVSRVLTRASRTLPRSTMLFAAPQNHHLPILCNQSQALIHDFS--IKFSPRQVSLLHHS 60

Query: 61  VFNPFTFQRFGVSSTTIHESSENEEGSAKQSNSGSTNKDPTK-HGNSEISDQAEESSFTL 120
             +    Q FG SS+   + SE E GSA ++   STN +P K  G++++SDQ +ES +T 
Sbjct: 61  TPSSSISQIFGFSSSASPQPSEREHGSAAENGGASTNGEPAKASGDAKVSDQTKESGYTS 120

Query: 121 DSSSTKSKS-RRQSRRPVQTAFSDSDSESDERPFMDDLVKSLARKEELLKSKHKEIEKMQ 180
           DS S KS S +R+     +TAFSDSDSE +     DDLVK +A KEELLK KH+EI++MQ
Sbjct: 121 DSQSKKSPSVKRRRGGTKRTAFSDSDSEGEGDLGFDDLVKLVAEKEELLKQKHEEIKRMQ 180

Query: 181 DKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINES 240
           DKVLRSYAEMENVMDRTRREAENSKKFA+QNFAKSLLDVADNLGRASSVVKDSFSK++ES
Sbjct: 181 DKVLRSYAEMENVMDRTRREAENSKKFAVQNFAKSLLDVADNLGRASSVVKDSFSKLDES 240

Query: 241 EDSSGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKP 300
           ++S GA PLLKTLLEGV+MTEKQL+EVF+K GVEKFDPTNE FDP+KH AVF + D SKP
Sbjct: 241 KESGGAAPLLKTLLEGVEMTEKQLIEVFRKYGVEKFDPTNEAFDPNKHNAVFNLEDASKP 300

Query: 301 DGTVAIVLKSGYMLHDRVLRPAEVGVTQAVEDNSTD 333
            GT+A+VLK GYML+DRV+RPAEVGVT A E+N+T+
Sbjct: 301 PGTIAVVLKPGYMLYDRVVRPAEVGVTTAPENNATE 334

[Close]

BLAST of HG10022443 vs. TAIR 10
Match: AT4G26780.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 302.4 bits (773), Expect = 4.6e-82
Identity = 186/334 (55.69%), Postives = 238/334 (71.26%), Query Frame = 0


Query: 1   MSVSRILFRASRSLH-RSS----PIPFGNQHFPILYRQFHGLVHEISGKVESAPVQVSLL 60
           M V RIL R +R+   RSS     +P  NQ  P+   +FH L H+ S K+   P Q+S++
Sbjct: 1   MLVLRILSRVTRNAGIRSSLSAVTLPARNQ-TPVFSSRFHSLAHDFSHKL--VPAQMSMM 60

Query: 61  NHIVFNPFTFQRFGVSSTTIHESSENEEGSAKQSNSGSTNKDPTKHGNSEISDQAEESSF 120
                + F  QRF  SS+T   S E++E       S ++ + PT   N     Q    S 
Sbjct: 61  -----DSFALQRFNFSSST---SPESDEKKTHTEASKTSEEKPTAEAN-----QPGLDSE 120

Query: 121 TLDSSSTKSKSRRQSRRPVQTAFSDSDSESDERPF-MDDLVKSLARKEELLKSKHKEIEK 180
           + DS +  +K +R+  +   ++ S+SDSESD+     DDLVK +A KEELL  K +EI++
Sbjct: 121 SKDSVTDSAKRKRKGAKGAASSSSESDSESDDDELSADDLVKLVAEKEELLSEKEEEIKQ 180

Query: 181 MQDKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKIN 240
           ++DKVLR+YAEMENVMDRTRR+AEN+KK+A+QNFAKSLLDVADNLGRASSVVK+SFSK++
Sbjct: 181 LKDKVLRTYAEMENVMDRTRRDAENTKKYAVQNFAKSLLDVADNLGRASSVVKESFSKLD 240

Query: 241 ESEDSSGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHYAVFQIPDGS 300
            SEDS+GA PLLKTLLEGV+MTEKQL EVFKK G+EK+DP NEPFDP++H AVFQ+PD S
Sbjct: 241 TSEDSAGAAPLLKTLLEGVEMTEKQLAEVFKKFGMEKYDPINEPFDPNRHNAVFQVPDAS 300

Query: 301 KPDGTVAIVLKSGYMLHDRVLRPAEVGVTQAVED 329
           KP+GTVA VLKSGY L+DRV+RPAEVGVTQ  E+
Sbjct: 301 KPEGTVAHVLKSGYTLYDRVIRPAEVGVTQGGEN 318

[Close]

BLAST of HG10022443 vs. TAIR 10
Match: AT5G55200.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 257.3 bits (656), Expect = 1.7e-68
Identity = 165/332 (49.70%), Postives = 210/332 (63.25%), Query Frame = 0


Query: 1   MSVSRILFRASRSL----HRSSPIPFGNQHFPILYRQFHGLVHEISGKVESAPVQVSLLN 60
           M VSR+L R SRS       SS +       PI+  +FH LVH    K+ + P  VSL N
Sbjct: 1   MLVSRVLSRVSRSAGLRSSFSSVVTPKRNQIPIVASRFHSLVHGTPNKLVAVP--VSLRN 60

Query: 61  HIVFNPFTFQRFGVSSTTIHESSENEEGSAKQSNSGSTNKDPTKHGNSEISDQAEESSFT 120
           H   +    QRFG  S++  E   NE           +N +  K G  E S+  E    T
Sbjct: 61  HGTLDLNVLQRFGFFSSSSAEPKGNE-----------SNTEVPKTG--ETSENVEVGKAT 120

Query: 121 LDSSSTKSKSRRQSRRPVQTAFSDSDSESDERPFMDDLVKSLARKEELLKSKHKEIEKMQ 180
                                  D++ + D+    DDLVK ++ KE+LLK + K+I +M+
Sbjct: 121 -----------------------DAEIDFDDLS-RDDLVKLVSEKEDLLKVQQKDIMEMK 180

Query: 181 DKVLRSYAEMENVMDRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINES 240
           DK LR+YAE +N+MDRT R AE++KKFA+QNFA SLLDVADNL RASSVVK+SFSKI+ S
Sbjct: 181 DKFLRTYAEQQNLMDRTNRNAESAKKFAVQNFATSLLDVADNLERASSVVKESFSKIDTS 240

Query: 241 EDSSGAVPLLKTLLEGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKP 300
           +D +GA PLLK LLEGV+MTEKQL EVF+K+G+ K DP NEPF+P++H AVFQ+PD SKP
Sbjct: 241 KDLAGATPLLKNLLEGVEMTEKQLAEVFRKAGLVKEDPLNEPFNPNRHNAVFQVPDASKP 293

Query: 301 DGTVAIVLKSGYMLHDRVLRPAEVGVTQAVED 329
            GT+A VLKSGY L+DRV+RPAEVGVT AVE+
Sbjct: 301 KGTIAHVLKSGYSLYDRVIRPAEVGVTCAVEN 293

[Close]

BLAST of HG10022443 vs. TAIR 10
Match: AT1G36390.1 (Co-chaperone GrpE family protein )

HSP 1 Score: 47.4 bits (111), Expect = 2.7e-05
Identity = 51/193 (26.42%), Postives = 86/193 (44.56%), Query Frame = 0


Query: 134 VQTAFSDSDSESDERPFMDDLVKSLARKEELLKSKHKEIEKMQDKVLRSYAEMENV---M 193
           ++T F   + E ++   MD  V SL+ K          I   ++  +R  A+ +N    +
Sbjct: 97  IETMFCKIEKEKNK---MDQKVLSLSMK----------IASEKEMKIRLQADFDNTRKKL 156

Query: 194 DRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINESEDSSGAVPLLKTLL 253
           D+ R   E++ K  I    KSLL + D+  +A   V+    K  +          + T  
Sbjct: 157 DKDRLSTESNAKVQI---LKSLLPIIDSFEKAKLQVRVDTDKEKK----------IDTSY 216

Query: 254 EGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKPDGTVAIVLKSGYML 313
           +G+    +Q +EV +   V       +PFDP  H A+ +    +   G +   L  G++L
Sbjct: 217 QGI---YRQFVEVLRYLRVSVIATVGKPFDPLLHEAISREESEAVKAGIITEELNKGFVL 260

Query: 314 HDRVLRPAEVGVT 324
            DRVLRPA+V V+
Sbjct: 277 GDRVLRPAKVKVS 260

[Close]

BLAST of HG10022443 vs. TAIR 10
Match: AT1G36390.2 (Co-chaperone GrpE family protein )

HSP 1 Score: 47.4 bits (111), Expect = 2.7e-05
Identity = 51/193 (26.42%), Postives = 86/193 (44.56%), Query Frame = 0


Query: 134 VQTAFSDSDSESDERPFMDDLVKSLARKEELLKSKHKEIEKMQDKVLRSYAEMENV---M 193
           ++T F   + E ++   MD  V SL+ K          I   ++  +R  A+ +N    +
Sbjct: 97  IETMFCKIEKEKNK---MDQKVLSLSMK----------IASEKEMKIRLQADFDNTRKKL 156

Query: 194 DRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKDSFSKINESEDSSGAVPLLKTLL 253
           D+ R   E++ K  I    KSLL + D+  +A   V+    K  +          + T  
Sbjct: 157 DKDRLSTESNAKVQI---LKSLLPIIDSFEKAKLQVRVDTDKEKK----------IDTSY 216

Query: 254 EGVDMTEKQLMEVFKKSGVEKFDPTNEPFDPHKHYAVFQIPDGSKPDGTVAIVLKSGYML 313
           +G+    +Q +EV +   V       +PFDP  H A+ +    +   G +   L  G++L
Sbjct: 217 QGI---YRQFVEVLRYLRVSVIATVGKPFDPLLHEAISREESEAVKAGIITEELNKGFVL 260

Query: 314 HDRVLRPAEVGVT 324
            DRVLRPA+V V+
Sbjct: 277 GDRVLRPAKVKVS 260

The following BLAST results are available for this feature:

BLAST of HG10022443 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038898199.1	5.1e-152	89.76	grpE protein homolog 2, mitochondrial-like [Benincasa hispida]	[more]
KAG7024936.1	1.8e-141	84.27	grpE, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6592058.1	8.5e-139	83.68	Transcriptional adapter ADA2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022936267.1	1.6e-137	83.38	grpE protein homolog 2, mitochondrial-like [Cucurbita moschata]	[more]
XP_023536002.1	4.7e-137	83.53	grpE protein homolog 2, mitochondrial-like isoform X2 [Cucurbita pepo subsp. pep...	[more]

BLAST of HG10022443 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LB47	6.4e-81	55.69	GrpE protein homolog 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge2 PE...	[more]
Q9FLP3	2.4e-67	49.70	GrpE protein homolog 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=Mge1 PE...	[more]
A4YJR1	1.2e-29	44.52	Protein GrpE OS=Bradyrhizobium sp. (strain ORS 278) OX=114615 GN=grpE PE=3 SV=1	[more]
Q3SW78	1.2e-29	42.07	Protein GrpE OS=Nitrobacter winogradskyi (strain ATCC 25391 / DSM 10237 / CIP 10...	[more]
B6JCI1	1.2e-29	44.87	Protein GrpE OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / KCTC...	[more]

BLAST of HG10022443 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F7Z2	7.8e-138	83.38	GrpE protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111442938 PE=3 SV=1	[more]
A0A6J1CCY7	3.2e-131	80.78	GrpE protein homolog OS=Momordica charantia OX=3673 GN=LOC111010351 PE=3 SV=1	[more]
M5WTU3	7.9e-98	63.10	GrpE protein homolog OS=Prunus persica OX=3760 GN=PRUPE_4G223200 PE=3 SV=1	[more]
A0A5E4FCQ4	7.9e-98	63.10	GrpE protein homolog OS=Prunus dulcis OX=3755 GN=ALMOND_2B019776 PE=3 SV=1	[more]
A0A6J5X7K4	1.3e-97	63.10	GrpE protein homolog OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS28266 PE=3 SV=1	[more]

BLAST of HG10022443 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26780.1	4.6e-82	55.69	Co-chaperone GrpE family protein	[more]
AT5G55200.1	1.7e-68	49.70	Co-chaperone GrpE family protein	[more]
AT1G36390.1	2.7e-05	26.42	Co-chaperone GrpE family protein	[more]
AT1G36390.2	2.7e-05	26.42	Co-chaperone GrpE family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 158..178
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..100
None	No IPR available	PANTHER	PTHR21237:SF37	GRPE PROTEIN HOMOLOG	coord: 44..329
IPR000740	GrpE nucleotide exchange factor	PRINTS	PR00773	GRPEPROTEIN	coord: 180..196 score: 42.83 coord: 276..291 score: 45.9 coord: 303..322 score: 51.56
IPR000740	GrpE nucleotide exchange factor	PFAM	PF01025	GrpE	coord: 158..323 e-value: 1.2E-49 score: 168.2
IPR000740	GrpE nucleotide exchange factor	PANTHER	PTHR21237	GRPE PROTEIN	coord: 44..329
IPR000740	GrpE nucleotide exchange factor	PROSITE	PS01071	GRPE	coord: 279..322
IPR000740	GrpE nucleotide exchange factor	HAMAP	MF_01151	GrpE	coord: 96..324 score: 18.312437
IPR000740	GrpE nucleotide exchange factor	CDD	cd00446	GrpE	coord: 173..322 e-value: 1.34209E-59 score: 185.787
IPR009012	GrpE nucleotide exchange factor, head	GENE3D	2.30.22.10	Head domain of nucleotide exchange factor GrpE	coord: 268..323 e-value: 5.3E-21 score: 76.3
IPR009012	GrpE nucleotide exchange factor, head	SUPERFAMILY	51064	Head domain of nucleotide exchange factor GrpE	coord: 269..324
IPR013805	GrpE nucleotide exchange factor, coiled-coil	GENE3D	3.90.20.20		coord: 154..266 e-value: 2.0E-28 score: 100.3
IPR013805	GrpE nucleotide exchange factor, coiled-coil	SUPERFAMILY	58014	Coiled-coil domain of nucleotide exchange factor GrpE	coord: 160..268

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10022443.1	HG10022443.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
biological_process	GO:0030150	protein import into mitochondrial matrix
cellular_component	GO:0001405	PAM complex, Tim23 associated import motor
molecular_function	GO:0000774	adenyl-nucleotide exchange factor activity
molecular_function	GO:0051087	chaperone binding
molecular_function	GO:0042803	protein homodimerization activity
molecular_function	GO:0051082	unfolded protein binding