HG10022436 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10022436
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionV-type proton ATPase subunit e1
LocationChr05: 24266627 .. 24268266 (+)
RNA-Seq ExpressionHG10022436
SyntenyHG10022436
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTAATATTGCTATTCTTCAATGCAGGTTTCACCTTACTTTGATCATTACTGCAACAATATGCTGCTGGATGATGTAAGTTTTTGTTTGTCTTACGTTTGATAACTACTAATTTCCTTTGTGCAATAAAATTAGCTTGTTATGTCAGAGGACAAATTAATGTTTTTAATTGAGGAAAATGAAAGAATATACAAGGACATACAAAGTCCACAAAAAGAGTCCTCAACTACAGGAAATGACTCCAATTCAAAAGAATACAACCAAGTTGTTAATTACAACAGATTCGAATGACAAAGAGTTATATTTAATCTCACCACCCCCCACACCTCCACTAAAGGTTTCTCCACCCATCTAAAAATTCTACTATTCTTCTCGAGCCACACTCTCAAGTCCGACAAGATGGCAAAGCTACAAGCCTGTCTCAAAACTCTTTCCTGAAAGTTCATCAAATGATTCAAATCTCCTCAACCTAAAGAGCAACTATCCCTATTATGCACCACAACAACCCAAACAAACTCAACTTGCCGTCTAAGGTAACAAACCCTTGCTTGGAGCGAGAAGCCTTTAGTAAGATTTTGCTTTAGAGAAGAATGATGCAACTAGATGGAGCAAATATATTGTACATCTGCAATAATGTATTAGTTGATTAATGAAATGTATTCTTAGGACTTGACAGGAGTACTTTTCATAGAATTGATACTTTTACTTACTGATATGTACAAATAAAGAGCCATAAAAATAAGGGAACAATCTTAGATTATAATGTCCACAAAATAGATACTAGTTAGGATGTTTCTTAACAGAAAAATCCATCAAGCAACCCCCGTATTCCCCCTCAAGAAGGCTAATGGATATTCTCTTATACCAATTGCTTGCAAGATTTTGGAATCATGCACCAATCAACCCTGTGGTTAAATCATGTATTTGGCTACTTGTTGATACTAAAGGGGTGTACAAATAAGCCCATTATCCAACTTTTTCTTTATGAAATGTCAATTGGTAGATCATGTTGGATGGGGTTGTGTGCTATATTATTTATTGATTTATTGACGATGGGCCTTCATATGCCTCTTTAATGAAATGTTCAAATCTTTAATGAAGTTTCAATCAGAGCAACTTACAAAATCCTTGACATTATATTGAATTCCTTCTAAAATTGACTGGCTACCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCTCCATCTAACTAGAATGTACTACCTATGATTTAGAGAAAGTTAAAATTTAGTCCATATAGTGTTAAAAGTTAGAATCTGGTCCCTATAGTTTGATAAAACTTCATAAATAGTCTCTATAGCTTGATAAAATCATCCTAAATAGTCCCTACGTTATAAATTAGTCCTTATGGTTTGATAAAATTATCATAAATAGTCCCTAGTAGGACTATTTATAACTTTCTCCAAACCATAAGGGACCAAATTTGCAATTTAACTTTAAATCTATGAACTGCACTACTCTTGTTACAGTATCTATTATTCCTAAACACTAAATACGTATAATGTATATTGACTACTGATGTTTTTTTTTGCATTTGTTGAATTTAGGTGGGCAATTGTATATCTTGCACAAATGAAGCCACTTATTGTTCCCATTCTGAATGATTCGGAGTGA

mRNA sequence

ATGGCTAATATTGCTATTCTTCAATGCAGGTTTCACCTTACTTTGATCATTACTGCAACAATATGCTGCTGGATGATGTGGGCAATTGTATATCTTGCACAAATGAAGCCACTTATTGTTCCCATTCTGAATGATTCGGAGTGA

Coding sequence (CDS)

ATGGCTAATATTGCTATTCTTCAATGCAGGTTTCACCTTACTTTGATCATTACTGCAACAATATGCTGCTGGATGATGTGGGCAATTGTATATCTTGCACAAATGAAGCCACTTATTGTTCCCATTCTGAATGATTCGGAGTGA

Protein sequence

MANIAILQCRFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Homology
[Close]
BLAST of HG10022436 vs. NCBI nr
Match: XP_008447705.1 (PREDICTED: V-type proton ATPase subunit e1 [Cucumis melo])

HSP 1 Score: 77.8 bits (190), Expect = 2.8e-11
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 

Query: 11 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 34 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]
BLAST of HG10022436 vs. NCBI nr
Match: XP_038899943.1 (V-type proton ATPase subunit e1-like [Benincasa hispida] >XP_038899944.1 V-type proton ATPase subunit e1-like [Benincasa hispida])

HSP 1 Score: 77.8 bits (190), Expect = 2.8e-11
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 

Query: 11 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 34 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]
BLAST of HG10022436 vs. NCBI nr
Match: XP_004151389.1 (V-type proton ATPase subunit e1 [Cucumis sativus] >XP_031744853.1 V-type proton ATPase subunit e1 [Cucumis sativus])

HSP 1 Score: 77.8 bits (190), Expect = 2.8e-11
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 

Query: 11 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 34 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]
BLAST of HG10022436 vs. NCBI nr
Match: XP_022139466.1 (V-type proton ATPase subunit e1 [Momordica charantia])

HSP 1 Score: 77.8 bits (190), Expect = 2.8e-11
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 

Query: 11 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 34 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]
BLAST of HG10022436 vs. NCBI nr
Match: KGN66617.2 (hypothetical protein Csa_023631, partial [Cucumis sativus])

HSP 1 Score: 77.8 bits (190), Expect = 2.8e-11
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 

Query: 11 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 32 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 68

[Close]
BLAST of HG10022436 vs. ExPASy Swiss-Prot
Match: Q9FLN5 (V-type proton ATPase subunit e1 OS=Arabidopsis thaliana OX=3702 GN=VHA-e1 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.8e-11
Identity = 29/36 (80.56%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 12 HLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          HLTL+ITAT+CCWMMWAIVY+AQM PLIVPIL+++E
Sbjct: 35 HLTLVITATVCCWMMWAIVYIAQMNPLIVPILSETE 70

[Close]
BLAST of HG10022436 vs. ExPASy Swiss-Prot
Match: Q9SZ13 (V-type proton ATPase subunit e2 OS=Arabidopsis thaliana OX=3702 GN=VHA-e2 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 8.4e-11
Identity = 29/36 (80.56%), Postives = 34/36 (94.44%), Query Frame = 0 

Query: 12 HLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          HLTL+ITAT+CCWMMWAIVY+AQM PLIVPIL++ E
Sbjct: 35 HLTLVITATVCCWMMWAIVYIAQMNPLIVPILSEVE 70

[Close]
BLAST of HG10022436 vs. ExPASy TrEMBL
Match: A0A0A0K8A5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G085210 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-11
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 

Query: 11 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 34 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]
BLAST of HG10022436 vs. ExPASy TrEMBL
Match: A0A6J1CCR8 (V-type proton ATPase subunit e1 OS=Momordica charantia OX=3673 GN=LOC111010390 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-11
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 

Query: 11 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 34 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]
BLAST of HG10022436 vs. ExPASy TrEMBL
Match: A0A1S3BIY2 (V-type proton ATPase subunit e1 OS=Cucumis melo OX=3656 GN=LOC103490117 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-11
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0 

Query: 11 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 34 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]
BLAST of HG10022436 vs. ExPASy TrEMBL
Match: A0A6J1IFJ9 (V-type proton ATPase subunit e1-like OS=Cucurbita maxima OX=3661 GN=LOC111476795 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.1e-11
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 11 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          FHLTLI TATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 34 FHLTLITTATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]
BLAST of HG10022436 vs. ExPASy TrEMBL
Match: A0A6J1F721 (V-type proton ATPase subunit e1-like OS=Cucurbita moschata OX=3662 GN=LOC111442944 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.1e-11
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0 

Query: 11 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          FHLTLI TATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 34 FHLTLITTATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]
BLAST of HG10022436 vs. TAIR 10
Match: AT5G55290.1 (ATPase, V0 complex, subunit E )

HSP 1 Score: 67.8 bits (164), Expect = 2.7e-12
Identity = 29/36 (80.56%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 12 HLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          HLTL+ITAT+CCWMMWAIVY+AQM PLIVPIL+++E
Sbjct: 35 HLTLVITATVCCWMMWAIVYIAQMNPLIVPILSETE 70

[Close]
BLAST of HG10022436 vs. TAIR 10
Match: AT5G55290.2 (ATPase, V0 complex, subunit E )

HSP 1 Score: 67.8 bits (164), Expect = 2.7e-12
Identity = 29/36 (80.56%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 12 HLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          HLTL+ITAT+CCWMMWAIVY+AQM PLIVPIL+++E
Sbjct: 35 HLTLVITATVCCWMMWAIVYIAQMNPLIVPILSETE 70

[Close]
BLAST of HG10022436 vs. TAIR 10
Match: AT4G26710.1 (ATPase, V0 complex, subunit E )

HSP 1 Score: 66.6 bits (161), Expect = 6.0e-12
Identity = 29/36 (80.56%), Postives = 34/36 (94.44%), Query Frame = 0 

Query: 12 HLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          HLTL+ITAT+CCWMMWAIVY+AQM PLIVPIL++ E
Sbjct: 35 HLTLVITATVCCWMMWAIVYIAQMNPLIVPILSEVE 70

[Close]
BLAST of HG10022436 vs. TAIR 10
Match: AT4G26710.2 (ATPase, V0 complex, subunit E )

HSP 1 Score: 66.6 bits (161), Expect = 6.0e-12
Identity = 29/36 (80.56%), Postives = 34/36 (94.44%), Query Frame = 0 

Query: 12 HLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          HLTL+ITAT+CCWMMWAIVY+AQM PLIVPIL++ E
Sbjct: 35 HLTLVITATVCCWMMWAIVYIAQMNPLIVPILSEVE 70

The following BLAST results are available for this feature:
BLAST of HG10022436 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008447705.12.8e-11100.00PREDICTED: V-type proton ATPase subunit e1 [Cucumis melo][more]
XP_038899943.12.8e-11100.00V-type proton ATPase subunit e1-like [Benincasa hispida] >XP_038899944.1 V-type ... [more]
XP_004151389.12.8e-11100.00V-type proton ATPase subunit e1 [Cucumis sativus] >XP_031744853.1 V-type proton ... [more]
XP_022139466.12.8e-11100.00V-type proton ATPase subunit e1 [Momordica charantia][more]
KGN66617.22.8e-11100.00hypothetical protein Csa_023631, partial [Cucumis sativus][more]
BLAST of HG10022436 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FLN53.8e-1180.56V-type proton ATPase subunit e1 OS=Arabidopsis thaliana OX=3702 GN=VHA-e1 PE=3 S... [more]
Q9SZ138.4e-1180.56V-type proton ATPase subunit e2 OS=Arabidopsis thaliana OX=3702 GN=VHA-e2 PE=3 S... [more]
BLAST of HG10022436 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8A51.3e-11100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G085210 PE=3 SV=1[more]
A0A6J1CCR81.3e-11100.00V-type proton ATPase subunit e1 OS=Momordica charantia OX=3673 GN=LOC111010390 P... [more]
A0A1S3BIY21.3e-11100.00V-type proton ATPase subunit e1 OS=Cucumis melo OX=3656 GN=LOC103490117 PE=3 SV=... [more]
A0A6J1IFJ95.1e-1197.30V-type proton ATPase subunit e1-like OS=Cucurbita maxima OX=3661 GN=LOC111476795... [more]
A0A6J1F7215.1e-1197.30V-type proton ATPase subunit e1-like OS=Cucurbita moschata OX=3662 GN=LOC1114429... [more]
BLAST of HG10022436 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G55290.12.7e-1280.56ATPase, V0 complex, subunit E [more]
AT5G55290.22.7e-1280.56ATPase, V0 complex, subunit E [more]
AT4G26710.16.0e-1280.56ATPase, V0 complex, subunit E [more]
AT4G26710.26.0e-1280.56ATPase, V0 complex, subunit E [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008389ATPase, V0 complex, subunit e1/e2PFAMPF05493ATP_synt_Hcoord: 11..44
e-value: 5.4E-15
score: 55.6
IPR008389ATPase, V0 complex, subunit e1/e2PANTHERPTHR12263VACUOLAR ATP SYNTHASE SUBUNIT Hcoord: 11..47
NoneNo IPR availablePANTHERPTHR12263:SF9V-TYPE PROTON ATPASE SUBUNIT E2coord: 11..47

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10022436.1HG10022436.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1902600 proton transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
molecular_function GO:0015078 proton transmembrane transporter activity