HG10022436 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10022436
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	V-type proton ATPase subunit e1
Location	Chr05: 24266627 .. 24268266 (+)
RNA-Seq Expression	HG10022436
Synteny	HG10022436

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAATATTGCTATTCTTCAATGCAGGTTTCACCTTACTTTGATCATTACTGCAACAATATGCTGCTGGATGATGTAAGTTTTTGTTTGTCTTACGTTTGATAACTACTAATTTCCTTTGTGCAATAAAATTAGCTTGTTATGTCAGAGGACAAATTAATGTTTTTAATTGAGGAAAATGAAAGAATATACAAGGACATACAAAGTCCACAAAAAGAGTCCTCAACTACAGGAAATGACTCCAATTCAAAAGAATACAACCAAGTTGTTAATTACAACAGATTCGAATGACAAAGAGTTATATTTAATCTCACCACCCCCCACACCTCCACTAAAGGTTTCTCCACCCATCTAAAAATTCTACTATTCTTCTCGAGCCACACTCTCAAGTCCGACAAGATGGCAAAGCTACAAGCCTGTCTCAAAACTCTTTCCTGAAAGTTCATCAAATGATTCAAATCTCCTCAACCTAAAGAGCAACTATCCCTATTATGCACCACAACAACCCAAACAAACTCAACTTGCCGTCTAAGGTAACAAACCCTTGCTTGGAGCGAGAAGCCTTTAGTAAGATTTTGCTTTAGAGAAGAATGATGCAACTAGATGGAGCAAATATATTGTACATCTGCAATAATGTATTAGTTGATTAATGAAATGTATTCTTAGGACTTGACAGGAGTACTTTTCATAGAATTGATACTTTTACTTACTGATATGTACAAATAAAGAGCCATAAAAATAAGGGAACAATCTTAGATTATAATGTCCACAAAATAGATACTAGTTAGGATGTTTCTTAACAGAAAAATCCATCAAGCAACCCCCGTATTCCCCCTCAAGAAGGCTAATGGATATTCTCTTATACCAATTGCTTGCAAGATTTTGGAATCATGCACCAATCAACCCTGTGGTTAAATCATGTATTTGGCTACTTGTTGATACTAAAGGGGTGTACAAATAAGCCCATTATCCAACTTTTTCTTTATGAAATGTCAATTGGTAGATCATGTTGGATGGGGTTGTGTGCTATATTATTTATTGATTTATTGACGATGGGCCTTCATATGCCTCTTTAATGAAATGTTCAAATCTTTAATGAAGTTTCAATCAGAGCAACTTACAAAATCCTTGACATTATATTGAATTCCTTCTAAAATTGACTGGCTACCTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCTCCATCTAACTAGAATGTACTACCTATGATTTAGAGAAAGTTAAAATTTAGTCCATATAGTGTTAAAAGTTAGAATCTGGTCCCTATAGTTTGATAAAACTTCATAAATAGTCTCTATAGCTTGATAAAATCATCCTAAATAGTCCCTACGTTATAAATTAGTCCTTATGGTTTGATAAAATTATCATAAATAGTCCCTAGTAGGACTATTTATAACTTTCTCCAAACCATAAGGGACCAAATTTGCAATTTAACTTTAAATCTATGAACTGCACTACTCTTGTTACAGTATCTATTATTCCTAAACACTAAATACGTATAATGTATATTGACTACTGATGTTTTTTTTTGCATTTGTTGAATTTAGGTGGGCAATTGTATATCTTGCACAAATGAAGCCACTTATTGTTCCCATTCTGAATGATTCGGAGTGA

mRNA sequence

ATGGCTAATATTGCTATTCTTCAATGCAGGTTTCACCTTACTTTGATCATTACTGCAACAATATGCTGCTGGATGATGTGGGCAATTGTATATCTTGCACAAATGAAGCCACTTATTGTTCCCATTCTGAATGATTCGGAGTGA

Coding sequence (CDS)

ATGGCTAATATTGCTATTCTTCAATGCAGGTTTCACCTTACTTTGATCATTACTGCAACAATATGCTGCTGGATGATGTGGGCAATTGTATATCTTGCACAAATGAAGCCACTTATTGTTCCCATTCTGAATGATTCGGAGTGA

Protein sequence

MANIAILQCRFHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE

Homology

[Close]

BLAST of HG10022436 vs. NCBI nr
Match: XP_008447705.1 (PREDICTED: V-type proton ATPase subunit e1 [Cucumis melo])

HSP 1 Score: 77.8 bits (190), Expect = 2.8e-11
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0


Query: 11 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 34 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]

BLAST of HG10022436 vs. NCBI nr
Match: XP_038899943.1 (V-type proton ATPase subunit e1-like [Benincasa hispida] >XP_038899944.1 V-type proton ATPase subunit e1-like [Benincasa hispida])

HSP 1 Score: 77.8 bits (190), Expect = 2.8e-11
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0


Query: 11 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 34 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]

BLAST of HG10022436 vs. NCBI nr
Match: XP_004151389.1 (V-type proton ATPase subunit e1 [Cucumis sativus] >XP_031744853.1 V-type proton ATPase subunit e1 [Cucumis sativus])

HSP 1 Score: 77.8 bits (190), Expect = 2.8e-11
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0


Query: 11 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 34 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]

BLAST of HG10022436 vs. NCBI nr
Match: XP_022139466.1 (V-type proton ATPase subunit e1 [Momordica charantia])

HSP 1 Score: 77.8 bits (190), Expect = 2.8e-11
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0


Query: 11 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 34 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]

BLAST of HG10022436 vs. NCBI nr
Match: KGN66617.2 (hypothetical protein Csa_023631, partial [Cucumis sativus])

HSP 1 Score: 77.8 bits (190), Expect = 2.8e-11
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0


Query: 11 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 32 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 68

[Close]

BLAST of HG10022436 vs. ExPASy Swiss-Prot
Match: Q9FLN5 (V-type proton ATPase subunit e1 OS=Arabidopsis thaliana OX=3702 GN=VHA-e1 PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 3.8e-11
Identity = 29/36 (80.56%), Postives = 35/36 (97.22%), Query Frame = 0


Query: 12 HLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          HLTL+ITAT+CCWMMWAIVY+AQM PLIVPIL+++E
Sbjct: 35 HLTLVITATVCCWMMWAIVYIAQMNPLIVPILSETE 70

[Close]

BLAST of HG10022436 vs. ExPASy Swiss-Prot
Match: Q9SZ13 (V-type proton ATPase subunit e2 OS=Arabidopsis thaliana OX=3702 GN=VHA-e2 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 8.4e-11
Identity = 29/36 (80.56%), Postives = 34/36 (94.44%), Query Frame = 0


Query: 12 HLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          HLTL+ITAT+CCWMMWAIVY+AQM PLIVPIL++ E
Sbjct: 35 HLTLVITATVCCWMMWAIVYIAQMNPLIVPILSEVE 70

[Close]

BLAST of HG10022436 vs. ExPASy TrEMBL
Match: A0A0A0K8A5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G085210 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-11
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0


Query: 11 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 34 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]

BLAST of HG10022436 vs. ExPASy TrEMBL
Match: A0A6J1CCR8 (V-type proton ATPase subunit e1 OS=Momordica charantia OX=3673 GN=LOC111010390 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-11
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0


Query: 11 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 34 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]

BLAST of HG10022436 vs. ExPASy TrEMBL
Match: A0A1S3BIY2 (V-type proton ATPase subunit e1 OS=Cucumis melo OX=3656 GN=LOC103490117 PE=3 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.3e-11
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0


Query: 11 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 34 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]

BLAST of HG10022436 vs. ExPASy TrEMBL
Match: A0A6J1IFJ9 (V-type proton ATPase subunit e1-like OS=Cucurbita maxima OX=3661 GN=LOC111476795 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.1e-11
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0


Query: 11 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          FHLTLI TATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 34 FHLTLITTATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]

BLAST of HG10022436 vs. ExPASy TrEMBL
Match: A0A6J1F721 (V-type proton ATPase subunit e1-like OS=Cucurbita moschata OX=3662 GN=LOC111442944 PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.1e-11
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 0


Query: 11 FHLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          FHLTLI TATICCWMMWAIVYLAQMKPLIVPILNDSE
Sbjct: 34 FHLTLITTATICCWMMWAIVYLAQMKPLIVPILNDSE 70

[Close]

BLAST of HG10022436 vs. TAIR 10
Match: AT5G55290.1 (ATPase, V0 complex, subunit E )

HSP 1 Score: 67.8 bits (164), Expect = 2.7e-12
Identity = 29/36 (80.56%), Postives = 35/36 (97.22%), Query Frame = 0


Query: 12 HLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          HLTL+ITAT+CCWMMWAIVY+AQM PLIVPIL+++E
Sbjct: 35 HLTLVITATVCCWMMWAIVYIAQMNPLIVPILSETE 70

[Close]

BLAST of HG10022436 vs. TAIR 10
Match: AT5G55290.2 (ATPase, V0 complex, subunit E )

HSP 1 Score: 67.8 bits (164), Expect = 2.7e-12
Identity = 29/36 (80.56%), Postives = 35/36 (97.22%), Query Frame = 0


Query: 12 HLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          HLTL+ITAT+CCWMMWAIVY+AQM PLIVPIL+++E
Sbjct: 35 HLTLVITATVCCWMMWAIVYIAQMNPLIVPILSETE 70

[Close]

BLAST of HG10022436 vs. TAIR 10
Match: AT4G26710.1 (ATPase, V0 complex, subunit E )

HSP 1 Score: 66.6 bits (161), Expect = 6.0e-12
Identity = 29/36 (80.56%), Postives = 34/36 (94.44%), Query Frame = 0


Query: 12 HLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          HLTL+ITAT+CCWMMWAIVY+AQM PLIVPIL++ E
Sbjct: 35 HLTLVITATVCCWMMWAIVYIAQMNPLIVPILSEVE 70

[Close]

BLAST of HG10022436 vs. TAIR 10
Match: AT4G26710.2 (ATPase, V0 complex, subunit E )

HSP 1 Score: 66.6 bits (161), Expect = 6.0e-12
Identity = 29/36 (80.56%), Postives = 34/36 (94.44%), Query Frame = 0


Query: 12 HLTLIITATICCWMMWAIVYLAQMKPLIVPILNDSE 48
          HLTL+ITAT+CCWMMWAIVY+AQM PLIVPIL++ E
Sbjct: 35 HLTLVITATVCCWMMWAIVYIAQMNPLIVPILSEVE 70

The following BLAST results are available for this feature:

BLAST of HG10022436 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447705.1	2.8e-11	100.00	PREDICTED: V-type proton ATPase subunit e1 [Cucumis melo]	[more]
XP_038899943.1	2.8e-11	100.00	V-type proton ATPase subunit e1-like [Benincasa hispida] >XP_038899944.1 V-type ...	[more]
XP_004151389.1	2.8e-11	100.00	V-type proton ATPase subunit e1 [Cucumis sativus] >XP_031744853.1 V-type proton ...	[more]
XP_022139466.1	2.8e-11	100.00	V-type proton ATPase subunit e1 [Momordica charantia]	[more]
KGN66617.2	2.8e-11	100.00	hypothetical protein Csa_023631, partial [Cucumis sativus]	[more]

BLAST of HG10022436 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FLN5	3.8e-11	80.56	V-type proton ATPase subunit e1 OS=Arabidopsis thaliana OX=3702 GN=VHA-e1 PE=3 S...	[more]
Q9SZ13	8.4e-11	80.56	V-type proton ATPase subunit e2 OS=Arabidopsis thaliana OX=3702 GN=VHA-e2 PE=3 S...	[more]

BLAST of HG10022436 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K8A5	1.3e-11	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G085210 PE=3 SV=1	[more]
A0A6J1CCR8	1.3e-11	100.00	V-type proton ATPase subunit e1 OS=Momordica charantia OX=3673 GN=LOC111010390 P...	[more]
A0A1S3BIY2	1.3e-11	100.00	V-type proton ATPase subunit e1 OS=Cucumis melo OX=3656 GN=LOC103490117 PE=3 SV=...	[more]
A0A6J1IFJ9	5.1e-11	97.30	V-type proton ATPase subunit e1-like OS=Cucurbita maxima OX=3661 GN=LOC111476795...	[more]
A0A6J1F721	5.1e-11	97.30	V-type proton ATPase subunit e1-like OS=Cucurbita moschata OX=3662 GN=LOC1114429...	[more]

BLAST of HG10022436 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G55290.1	2.7e-12	80.56	ATPase, V0 complex, subunit E	[more]
AT5G55290.2	2.7e-12	80.56	ATPase, V0 complex, subunit E	[more]
AT4G26710.1	6.0e-12	80.56	ATPase, V0 complex, subunit E	[more]
AT4G26710.2	6.0e-12	80.56	ATPase, V0 complex, subunit E	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008389	ATPase, V0 complex, subunit e1/e2	PFAM	PF05493	ATP_synt_H	coord: 11..44 e-value: 5.4E-15 score: 55.6
IPR008389	ATPase, V0 complex, subunit e1/e2	PANTHER	PTHR12263	VACUOLAR ATP SYNTHASE SUBUNIT H	coord: 11..47
None	No IPR available	PANTHER	PTHR12263:SF9	V-TYPE PROTON ATPASE SUBUNIT E2	coord: 11..47

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10022436.1	HG10022436.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1902600	proton transmembrane transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
molecular_function	GO:0015078	proton transmembrane transporter activity