HG10022304 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10022304
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	ANK_REP_REGION domain-containing protein
Location	Chr05: 22892863 .. 22894861 (+)
RNA-Seq Expression	HG10022304
Synteny	HG10022304

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATATGGAAATCGATGCTTCCAAAGATGTTCGTCTAATCAAAGACGAAGATCTTTTCAAAGCCGCAGAGACCGGCGATTCTTCCGCTTTTACTGCCCTCGCACCACAGCAGCTTTCTCAATCTCTCTCCCTAAGAAATGAGGATGACCGCTCTCTTCTCCATGTTGCCGTCTCTTCAGGCCACGCCGATGTCAGTCGTTACTTCAACTTTTCTTTGAAGTAGAAAATTTCGAAACCAAAAAGACTTCTCCCATGGCTTTTCTTTTGTTTTTGGCATTGTTCTTGTTATTTAAAAGGACCTATCATCTTGTCAATTCTAAATTTGGATGTCTGTTGGCCTTATTTATACATTATTGGAACTCTTCGTAATGCACCAGGTGGTAAAGATATTGGCTACTGCTGATCAGTCTACTAAATTAATTAACTGTGCCGATGAGGAAGGTTGGGCACCGATTCATTCTGCTGCTAGCATTGGGAGGTCTGATATTTTAGATATCTTGTTGAGCGCAGGTTAGTGGATTCTAAAACTGTTTGATTTTTTGTCCATCTGTTTACTTTTGTGATGATTTGAGTTAACTAGATTATGAACAAAGCTAAGTTGTTTACCATAGGGTTGAATCTTACTTTAGAGTCTGCGGTATTGACTGTGGACGACTGTTGATTAGAAGTTCTTATTTTACTTTAGTTAAAAGGCGACAAATTTTTGGACGTCTCTAGAAAAAGGCACCTTGAAGAGCGTCACTCCCACCTTCCATCTTCAAGATGCCCATGAAATTTGTTAAAACTGTCAAGTCATCAAAATTATCTTTTCTTTTTTCTTCTCTTGTTATTATTAGTTTTTTGGGTGTTGATAAAGAGTGTGACTCTCACTATCTAATTTGAACTTAAATCTTAAATGAATGGTGTAACCAGAAAACACGGGCACTAATGTTTGGAGGACCTAGGATAATGGAAAGACTTCTTTTGGAGCATCATCATCATGTACGATTTTTAAGGCTATCTGGTACTAATTCTTAGATTTTTCACCAGTGGTATTAGTTGTGGTGGGCGTTTGTTGGTGCATTCAAGCTAAACCTCAAGTATTGGCACAGGACAACACGTGGTCTTGTTATATATTCTGAGTACTAATTTCTAGATTTTTCACATCGGGGATAAGGTGTTTTTGGAAAGGAGTAATTTTAGGTCTTCAATAGTGAAAGTTTACTAGAGGAATGGTTGAAAGGAAAATGTAACCTTTAAAAGGAGTAATTTTAGGCCCCCAATTGTAAATGTCTATAATAGAAAGGGTAAAACGGTAAAGTGAGAAAATTAGTTAGAATGAAGGATGTGTTTTGCCTTTTTTTGGTCAGTTCCCTATAGGGGGAAATGATATCAGTTATTTTGGGAATTGTAGTGCATTTTTGGAAGAGATACAAACACTTTTGAATTGGCTAAGCTTTGTAGGTGACGTTGTCGCTTTGTTCTCCACATTGCAAAAATAAAAGTTGCCACATGCCTATTAGGAACTCACTTCAAAATGATGGTGTAGGCCCTTGGGAGAACCAAGATCATTATGGTATAAATTCATTAGCAGCAAATATGGGTACCACAAGTTGGAGTAGTGTTGATATGATCATAGCCTCATCTAACCCTAAGAAGACCAAATTGTAAGAGAAAGAGCTCAAGAGGAGGACAAAGGTGAAATACTGCCACACCACTAGCGCACCCAACTCCCTAAGCCATTTGTACAAGCATGCCCATGTAGACATGAAGCTCACCATGCATACCAGCTCACTTGCTTGCACGCCAAGCCATGCCCCACAAGCATGCACGCGTACGAGTTGCGTGCAGACAAGCATGCCTCATGGAGCATGCATGACCTTCGCCTTAGAGGCCAGTCAGAAGACCTAGAACACACAACAGCCCATACACGAGCGCTCATGGTTGATGACACTCAACCTTGTGTGACCAGCGTGCAAACACCTACCAGCCCCAATTGCCCAATTGCAAGCGTGTGA

mRNA sequence

ATGGATATGGAAATCGATGCTTCCAAAGATGTTCGTCTAATCAAAGACGAAGATCTTTTCAAAGCCGCAGAGACCGGCGATTCTTCCGCTTTTACTGCCCTCGCACCACAGCAGCTTTCTCAATCTCTCTCCCTAAGAAATGAGGATGACCGCTCTCTTCTCCATGTTGCCGTCTCTTCAGGCCACGCCGATGTGGTAAAGATATTGGCTACTGCTGATCAGTCTACTAAATTAATTAACTGTGCCGATGAGGAAGGTTGGGCACCGATTCATTCTGCTGCTAGCATTGGGAGGTCTGATATTTTAGATATCTTGTTGAGCGCAGGCCCTTGGGAGAACCAAGATCATTATGGTATAAATTCATTAGCAGCAAATATGGGTACCACAAGTTGGAGTAGTGTTGATATGATCATAGCCTCATCTAACCCTAAGAAGACCAAATTACATGAAGCTCACCATGCATACCAGCTCACTTGCTTGCACGCCAAGCCATGCCCCACAAGCATGCACGCGTACGAGTTGCGTGCAGACAAGCATGCCTCATGGAGCATGCATGACCTTCGCCTTAGAGGCCAGTCAGAAGACCTAGAACACACAACAGCCCATACACGAGCGCTCATGGTTGATGACACTCAACCTTGTGTGACCAGCGTGCAAACACCTACCAGCCCCAATTGCCCAATTGCAAGCGTGTGA

Coding sequence (CDS)

ATGGATATGGAAATCGATGCTTCCAAAGATGTTCGTCTAATCAAAGACGAAGATCTTTTCAAAGCCGCAGAGACCGGCGATTCTTCCGCTTTTACTGCCCTCGCACCACAGCAGCTTTCTCAATCTCTCTCCCTAAGAAATGAGGATGACCGCTCTCTTCTCCATGTTGCCGTCTCTTCAGGCCACGCCGATGTGGTAAAGATATTGGCTACTGCTGATCAGTCTACTAAATTAATTAACTGTGCCGATGAGGAAGGTTGGGCACCGATTCATTCTGCTGCTAGCATTGGGAGGTCTGATATTTTAGATATCTTGTTGAGCGCAGGCCCTTGGGAGAACCAAGATCATTATGGTATAAATTCATTAGCAGCAAATATGGGTACCACAAGTTGGAGTAGTGTTGATATGATCATAGCCTCATCTAACCCTAAGAAGACCAAATTACATGAAGCTCACCATGCATACCAGCTCACTTGCTTGCACGCCAAGCCATGCCCCACAAGCATGCACGCGTACGAGTTGCGTGCAGACAAGCATGCCTCATGGAGCATGCATGACCTTCGCCTTAGAGGCCAGTCAGAAGACCTAGAACACACAACAGCCCATACACGAGCGCTCATGGTTGATGACACTCAACCTTGTGTGACCAGCGTGCAAACACCTACCAGCCCCAATTGCCCAATTGCAAGCGTGTGA

Protein sequence

MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAGPWENQDHYGINSLAANMGTTSWSSVDMIIASSNPKKTKLHEAHHAYQLTCLHAKPCPTSMHAYELRADKHASWSMHDLRLRGQSEDLEHTTAHTRALMVDDTQPCVTSVQTPTSPNCPIASV

Homology

[Close]

BLAST of HG10022304 vs. NCBI nr
Match: XP_038890172.1 (26S proteasome non-ATPase regulatory subunit 10 [Benincasa hispida])

HSP 1 Score: 203.4 bits (516), Expect = 2.2e-48
Identity = 110/144 (76.39%), Postives = 115/144 (79.86%), Query Frame = 0


Query: 1   MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSS 60
           MDMEID SKDVRLIKDEDLFKAAETGDSSAFTAL PQQLSQSLSLRNEDDRSLLHVAVSS
Sbjct: 1   MDMEIDTSKDVRLIKDEDLFKAAETGDSSAFTALEPQQLSQSLSLRNEDDRSLLHVAVSS 60

Query: 61  GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAGPWENQDHYGIN 120
           GHADVVKILATADQS KLINCADEEGWAPIHSAASIGRSDILDILLS G   N  + G  
Sbjct: 61  GHADVVKILATADQSRKLINCADEEGWAPIHSAASIGRSDILDILLSGGANVNVKNDGGR 120

Query: 121 SLAANMGTTSWSSVDMIIASSNPK 145
           +      +  W  +   + S   K
Sbjct: 121 TALHYASSKGWLKIAETLISHGAK 144

[Close]

BLAST of HG10022304 vs. NCBI nr
Match: XP_022946193.1 (26S proteasome non-ATPase regulatory subunit 10 [Cucurbita moschata] >KAG6599046.1 26S proteasome non-ATPase regulatory subunit 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 203.0 bits (515), Expect = 2.8e-48
Identity = 115/159 (72.33%), Postives = 121/159 (76.10%), Query Frame = 0


Query: 1   MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSS 60
           MDMEIDASKD+RLIKDEDLFKAAETGDSSAF ALAP QLSQSLSLRNED RSLLHVAVSS
Sbjct: 1   MDMEIDASKDLRLIKDEDLFKAAETGDSSAFAALAPHQLSQSLSLRNEDGRSLLHVAVSS 60

Query: 61  GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAGPWENQDHYGIN 120
           GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLS G   N  + G  
Sbjct: 61  GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSGGADVNLKNNGGR 120

Query: 121 SLAANMGTTSWSSVDMII----ASSNPKK----TKLHEA 152
           +      +  W  +   +    A  NPK     T LH A
Sbjct: 121 TALHYASSKGWLKIAETLISHGAKINPKDKVGCTPLHRA 159

[Close]

BLAST of HG10022304 vs. NCBI nr
Match: XP_023545436.1 (26S proteasome non-ATPase regulatory subunit 10 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203.0 bits (515), Expect = 2.8e-48
Identity = 115/159 (72.33%), Postives = 121/159 (76.10%), Query Frame = 0


Query: 1   MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSS 60
           MDMEIDASKD+RLIKDEDLFKAAETGDSSAF ALAP QLSQSLSLRNED RSLLHVAVSS
Sbjct: 1   MDMEIDASKDLRLIKDEDLFKAAETGDSSAFAALAPHQLSQSLSLRNEDGRSLLHVAVSS 60

Query: 61  GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAGPWENQDHYGIN 120
           GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLS G   N  + G  
Sbjct: 61  GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSGGADVNLKNNGGR 120

Query: 121 SLAANMGTTSWSSVDMII----ASSNPKK----TKLHEA 152
           +      +  W  +   +    A  NPK     T LH A
Sbjct: 121 TALHYASSKGWLKIAETLISHGAKINPKDKVGCTPLHRA 159

[Close]

BLAST of HG10022304 vs. NCBI nr
Match: KAG7029991.1 (26S proteasome non-ATPase regulatory subunit 10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 202.6 bits (514), Expect = 3.7e-48
Identity = 114/170 (67.06%), Postives = 124/170 (72.94%), Query Frame = 0


Query: 1   MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSS 60
           MDMEIDASKD+RLIKDEDLFKAAETGDSSAF ALAP QLSQSLSLRNED RSLLHVAVSS
Sbjct: 1   MDMEIDASKDLRLIKDEDLFKAAETGDSSAFAALAPHQLSQSLSLRNEDGRSLLHVAVSS 60

Query: 61  GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAGPWENQDHYGIN 120
           GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLS G   N  + G  
Sbjct: 61  GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSGGADVNLKNNGGR 120

Query: 121 SLAANMGTTSWSSVDMIIASSNPKKTKLHEAHHAYQLTCLHAKPCPTSMH 171
           +      +  W  +   + S   K     +A    +  C+    C T +H
Sbjct: 121 TALHYASSKGWLKIAETLISHGAKINPKDKASRVEKSYCVILVGC-TPLH 169

[Close]

BLAST of HG10022304 vs. NCBI nr
Match: XP_022999411.1 (26S proteasome non-ATPase regulatory subunit 10 [Cucurbita maxima])

HSP 1 Score: 200.3 bits (508), Expect = 1.8e-47
Identity = 114/159 (71.70%), Postives = 120/159 (75.47%), Query Frame = 0


Query: 1   MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSS 60
           MDMEIDASKD+RLIKDEDLFKAAETGDSSAF ALAP QLSQSLSLRNED RSLLHVAVSS
Sbjct: 1   MDMEIDASKDLRLIKDEDLFKAAETGDSSAFAALAPHQLSQSLSLRNEDGRSLLHVAVSS 60

Query: 61  GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAGPWENQDHYGIN 120
           GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLS     N  + G  
Sbjct: 61  GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSGRAEVNLKNNGGR 120

Query: 121 SLAANMGTTSWSSVDMII----ASSNPKK----TKLHEA 152
           +      +  W  +   +    A  NPK     T LH A
Sbjct: 121 TALHYASSKGWLKIAETLISHGAKINPKDKVGCTPLHRA 159

[Close]

BLAST of HG10022304 vs. ExPASy Swiss-Prot
Match: O75832 (26S proteasome non-ATPase regulatory subunit 10 OS=Homo sapiens OX=9606 GN=PSMD10 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.6e-06
Identity = 30/74 (40.54%), Postives = 45/74 (60.81%), Query Frame = 0


Query: 41  QSLSLR-NEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRS 100
           +SL+ R ++D R+ LH A S+GH ++V+ L    Q    +N  D+ GW+P+H AAS GR 
Sbjct: 30  KSLATRTDQDSRTALHWACSAGHTEIVEFLL---QLGVPVNDKDDAGWSPLHIAASAGRD 89

Query: 101 DILDILLSAGPWEN 114
           +I+  LL  G   N
Sbjct: 90  EIVKALLGKGAQVN 100

[Close]

BLAST of HG10022304 vs. ExPASy Swiss-Prot
Match: Q9Z2X2 (26S proteasome non-ATPase regulatory subunit 10 OS=Mus musculus OX=10090 GN=Psmd10 PE=1 SV=3)

HSP 1 Score: 53.9 bits (128), Expect = 2.8e-06
Identity = 30/74 (40.54%), Postives = 45/74 (60.81%), Query Frame = 0


Query: 41  QSLSLR-NEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRS 100
           +SL+ R ++D R+ LH A S+GH ++V+ L    Q    +N  D+ GW+P+H AAS GR 
Sbjct: 30  KSLATRTDQDSRTALHWACSAGHTEIVEFLL---QLGVPVNDKDDAGWSPLHIAASAGRD 89

Query: 101 DILDILLSAGPWEN 114
           +I+  LL  G   N
Sbjct: 90  EIVKALLVKGAHVN 100

[Close]

BLAST of HG10022304 vs. ExPASy Swiss-Prot
Match: Q9BZL4 (Protein phosphatase 1 regulatory subunit 12C OS=Homo sapiens OX=9606 GN=PPP1R12C PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.6e-06
Identity = 33/91 (36.26%), Postives = 43/91 (47.25%), Query Frame = 0


Query: 19  LFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKL 78
           + +AA+ G  +     AP      L   N D  S LH A    + +VV+ L    +    
Sbjct: 70  MLRAADPGPGAELDPAAPPPARAVLDSTNADGISALHQACIDENLEVVRFLV---EQGAT 129

Query: 79  INCADEEGWAPIHSAASIGRSDILDILLSAG 110
           +N AD EGW P+H AAS G  DI   LLS G
Sbjct: 130 VNQADNEGWTPLHVAASCGYLDIARYLLSHG 157

[Close]

BLAST of HG10022304 vs. ExPASy Swiss-Prot
Match: Q9Z2X3 (26S proteasome non-ATPase regulatory subunit 10 OS=Rattus norvegicus OX=10116 GN=Psmd10 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 3.6e-06
Identity = 30/74 (40.54%), Postives = 45/74 (60.81%), Query Frame = 0


Query: 41  QSLSLR-NEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRS 100
           +SL+ R ++D R+ LH A S+GH ++V+ L    Q    +N  D+ GW+P+H AAS GR 
Sbjct: 30  KSLATRTDQDSRTALHWACSAGHTEIVEFLL---QLGVPVNEKDDAGWSPLHIAASAGRD 89

Query: 101 DILDILLSAGPWEN 114
           +I+  LL  G   N
Sbjct: 90  EIVKALLIKGAQVN 100

[Close]

BLAST of HG10022304 vs. ExPASy Swiss-Prot
Match: Q5RJK8 (Acyl-CoA-binding domain-containing protein 6 OS=Rattus norvegicus OX=10116 GN=Acbd6 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-05
Identity = 30/95 (31.58%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 15  KDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQ 74
           +D+++F      +    T  A +  +  +++ +E+ R+LLH A   GH ++VK+L   + 
Sbjct: 158 EDKNIFDYCRENNIDHITK-AIKSKTVDVNMTDEEGRALLHWACDRGHKELVKVLLQCEA 217

Query: 75  STKLINCADEEGWAPIHSAASIGRSDILDILLSAG 110
               INC D EG   +H AA+   SDI+++LL +G
Sbjct: 218 G---INCQDNEGQTALHYAAACEFSDIVELLLQSG 248

[Close]

BLAST of HG10022304 vs. ExPASy TrEMBL
Match: A0A6J1G342 (26S proteasome non-ATPase regulatory subunit 10 OS=Cucurbita moschata OX=3662 GN=LOC111450350 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 1.4e-48
Identity = 115/159 (72.33%), Postives = 121/159 (76.10%), Query Frame = 0


Query: 1   MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSS 60
           MDMEIDASKD+RLIKDEDLFKAAETGDSSAF ALAP QLSQSLSLRNED RSLLHVAVSS
Sbjct: 1   MDMEIDASKDLRLIKDEDLFKAAETGDSSAFAALAPHQLSQSLSLRNEDGRSLLHVAVSS 60

Query: 61  GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAGPWENQDHYGIN 120
           GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLS G   N  + G  
Sbjct: 61  GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSGGADVNLKNNGGR 120

Query: 121 SLAANMGTTSWSSVDMII----ASSNPKK----TKLHEA 152
           +      +  W  +   +    A  NPK     T LH A
Sbjct: 121 TALHYASSKGWLKIAETLISHGAKINPKDKVGCTPLHRA 159

[Close]

BLAST of HG10022304 vs. ExPASy TrEMBL
Match: A0A6J1KCY7 (26S proteasome non-ATPase regulatory subunit 10 OS=Cucurbita maxima OX=3661 GN=LOC111493792 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 8.9e-48
Identity = 114/159 (71.70%), Postives = 120/159 (75.47%), Query Frame = 0


Query: 1   MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSS 60
           MDMEIDASKD+RLIKDEDLFKAAETGDSSAF ALAP QLSQSLSLRNED RSLLHVAVSS
Sbjct: 1   MDMEIDASKDLRLIKDEDLFKAAETGDSSAFAALAPHQLSQSLSLRNEDGRSLLHVAVSS 60

Query: 61  GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAGPWENQDHYGIN 120
           GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLS     N  + G  
Sbjct: 61  GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSGRAEVNLKNNGGR 120

Query: 121 SLAANMGTTSWSSVDMII----ASSNPKK----TKLHEA 152
           +      +  W  +   +    A  NPK     T LH A
Sbjct: 121 TALHYASSKGWLKIAETLISHGAKINPKDKVGCTPLHRA 159

[Close]

BLAST of HG10022304 vs. ExPASy TrEMBL
Match: A0A5A7TER9 (26S proteasome non-ATPase regulatory subunit 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold278G00140 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.3e-46
Identity = 105/144 (72.92%), Postives = 112/144 (77.78%), Query Frame = 0


Query: 1   MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSS 60
           MDMEIDASKDVRLI D+DLFKAAETGDSS FTAL P QLSQSLSLRNEDDRSLLHVAVSS
Sbjct: 1   MDMEIDASKDVRLINDDDLFKAAETGDSSVFTALTPHQLSQSLSLRNEDDRSLLHVAVSS 60

Query: 61  GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAGPWENQDHYGIN 120
           GHADVVKIL TADQSTK+INCADEEGWAPIHSAASIGRSDILD LLS G   N  + G  
Sbjct: 61  GHADVVKILVTADQSTKVINCADEEGWAPIHSAASIGRSDILDTLLSGGADVNLKNDGGR 120

Query: 121 SLAANMGTTSWSSVDMIIASSNPK 145
           +      +  W  +   + S   K
Sbjct: 121 TALHYASSKGWLKIAETLISHGAK 144

[Close]

BLAST of HG10022304 vs. ExPASy TrEMBL
Match: A0A0A0KTY4 (ANK_REP_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G484670 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.3e-46
Identity = 106/144 (73.61%), Postives = 112/144 (77.78%), Query Frame = 0


Query: 1   MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSS 60
           MDMEIDASKDV LIKD DLFKAAETGDSS FTAL P QLSQSLSLRNEDDRSLLHVAVSS
Sbjct: 1   MDMEIDASKDVCLIKDNDLFKAAETGDSSVFTALTPHQLSQSLSLRNEDDRSLLHVAVSS 60

Query: 61  GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAGPWENQDHYGIN 120
           GHADVVKIL TADQSTK+INCADEEGWAPIHSAASIGRSDILDILLS G   N  + G  
Sbjct: 61  GHADVVKILVTADQSTKVINCADEEGWAPIHSAASIGRSDILDILLSGGADVNLKNDGGR 120

Query: 121 SLAANMGTTSWSSVDMIIASSNPK 145
           +      +  W  +   + S   K
Sbjct: 121 TALHYASSKGWLKIAETLISHGAK 144

[Close]

BLAST of HG10022304 vs. ExPASy TrEMBL
Match: A0A1S3CPG1 (26S proteasome non-ATPase regulatory subunit 10 OS=Cucumis melo OX=3656 GN=LOC103503330 PE=4 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 1.3e-46
Identity = 105/144 (72.92%), Postives = 112/144 (77.78%), Query Frame = 0


Query: 1   MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSS 60
           MDMEIDASKDVRLI D+DLFKAAETGDSS FTAL P QLSQSLSLRNEDDRSLLHVAVSS
Sbjct: 1   MDMEIDASKDVRLINDDDLFKAAETGDSSVFTALTPHQLSQSLSLRNEDDRSLLHVAVSS 60

Query: 61  GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAGPWENQDHYGIN 120
           GHADVVKIL TADQSTK+INCADEEGWAPIHSAASIGRSDILD LLS G   N  + G  
Sbjct: 61  GHADVVKILVTADQSTKVINCADEEGWAPIHSAASIGRSDILDTLLSGGADVNLKNDGGR 120

Query: 121 SLAANMGTTSWSSVDMIIASSNPK 145
           +      +  W  +   + S   K
Sbjct: 121 TALHYASSKGWLKIAETLISHGAK 144

[Close]

BLAST of HG10022304 vs. TAIR 10
Match: AT2G03430.1 (Ankyrin repeat family protein )

HSP 1 Score: 124.8 bits (312), Expect = 9.1e-29
Identity = 61/118 (51.69%), Postives = 90/118 (76.27%), Query Frame = 0


Query: 1   MDMEIDASKDVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSS 60
           M++  D +K +R   DE+LFKAAE GDSS F +L+ +QLS+SL+ RNED RSLLHVA S 
Sbjct: 1   MEIATDTAKQMR---DEELFKAAEWGDSSLFMSLSEEQLSKSLNFRNEDGRSLLHVAASF 60

Query: 61  GHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLSAGPWENQDHYG 119
           GH+ +VK+L+++D++  +IN  D+EGWAP+HSAASIG ++++++LL+ G   N  + G
Sbjct: 61  GHSQIVKLLSSSDEAKTVINSKDDEGWAPLHSAASIGNAELVEVLLTRGADVNAKNNG 115

[Close]

BLAST of HG10022304 vs. TAIR 10
Match: AT3G01750.1 (Ankyrin repeat family protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.8e-05
Identity = 24/68 (35.29%), Postives = 39/68 (57.35%), Query Frame = 0


Query: 43  LSLRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDIL 102
           L+ R++   ++LH A   G   VVK L  +  S  L++  D +G   +H AA  G +D++
Sbjct: 218 LAFRDKQGSTILHSAAGKGKTQVVKELVAS--SYHLVDAVDNQGNTALHVAAYRGHADLV 277

Query: 103 DILLSAGP 111
           D+L+SA P
Sbjct: 278 DVLISASP 283

[Close]

BLAST of HG10022304 vs. TAIR 10
Match: AT3G09550.1 (Ankyrin repeat family protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.8e-05
Identity = 29/98 (29.59%), Postives = 49/98 (50.00%), Query Frame = 0


Query: 10  DVRLIKDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKIL 69
           +V  + +  LF AAE G+      L P    +SL  +N      LH+A S GH  +V++L
Sbjct: 138 EVNELGETPLFTAAEKGNIDVVKELLPYTTIESLMQKNLSGFDALHIACSQGHRSIVQLL 197

Query: 70  ATADQSTKLINCADEEGWAPIHSAASIGRSDILDILLS 108
              +   +L     +    P+ SAA+ G S++++ LL+
Sbjct: 198 --LEHEPQLSKTVAQSNATPLVSAATRGHSEVVNELLA 233

[Close]

BLAST of HG10022304 vs. TAIR 10
Match: AT5G12320.1 (ankyrin repeat family protein )

HSP 1 Score: 45.1 bits (105), Expect = 9.2e-05
Identity = 31/95 (32.63%), Postives = 48/95 (50.53%), Query Frame = 0


Query: 15  KDEDLFKAAETGDSSAFTALAPQQLSQSLSLRNEDDRSLLHVAVSSGHADVVKILATADQ 74
           K +DL +AA   D      LA   L  SL  R+   R+ LH+A ++GH  +V+ L +   
Sbjct: 11  KVDDLLEAARYNDIDDLRTLASDGL--SLHSRDSQGRTALHMAAANGHMTIVEYLISEGV 70

Query: 75  STKLINCADEEGWAPIHSAASIGRSDILDILLSAG 110
               IN  ++E  AP+H A   G  +++  L+ AG
Sbjct: 71  D---INALNDENNAPLHWACLNGHVEVVKRLILAG 100

[Close]

BLAST of HG10022304 vs. TAIR 10
Match: AT5G40160.1 (Ankyrin repeat family protein )

HSP 1 Score: 43.9 bits (102), Expect = 2.0e-04
Identity = 24/65 (36.92%), Postives = 33/65 (50.77%), Query Frame = 0


Query: 45  LRNEDDRSLLHVAVSSGHADVVKILATADQSTKLINCADEEGWAPIHSAASIGRSDILDI 104
           L++ D  + +H AV  G    VK+L   +     +N AD EGW P+H A      DI  I
Sbjct: 213 LQDRDGAAPIHYAVQVGALQTVKLLFKYNVD---VNVADNEGWTPLHIAVQSRNRDITKI 272

Query: 105 LLSAG 110
           LL+ G
Sbjct: 273 LLTNG 274

The following BLAST results are available for this feature:

BLAST of HG10022304 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890172.1	2.2e-48	76.39	26S proteasome non-ATPase regulatory subunit 10 [Benincasa hispida]	[more]
XP_022946193.1	2.8e-48	72.33	26S proteasome non-ATPase regulatory subunit 10 [Cucurbita moschata] >KAG6599046...	[more]
XP_023545436.1	2.8e-48	72.33	26S proteasome non-ATPase regulatory subunit 10 [Cucurbita pepo subsp. pepo]	[more]
KAG7029991.1	3.7e-48	67.06	26S proteasome non-ATPase regulatory subunit 10, partial [Cucurbita argyrosperma...	[more]
XP_022999411.1	1.8e-47	71.70	26S proteasome non-ATPase regulatory subunit 10 [Cucurbita maxima]	[more]

BLAST of HG10022304 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O75832	1.6e-06	40.54	26S proteasome non-ATPase regulatory subunit 10 OS=Homo sapiens OX=9606 GN=PSMD1...	[more]
Q9Z2X2	2.8e-06	40.54	26S proteasome non-ATPase regulatory subunit 10 OS=Mus musculus OX=10090 GN=Psmd...	[more]
Q9BZL4	3.6e-06	36.26	Protein phosphatase 1 regulatory subunit 12C OS=Homo sapiens OX=9606 GN=PPP1R12C...	[more]
Q9Z2X3	3.6e-06	40.54	26S proteasome non-ATPase regulatory subunit 10 OS=Rattus norvegicus OX=10116 GN...	[more]
Q5RJK8	1.1e-05	31.58	Acyl-CoA-binding domain-containing protein 6 OS=Rattus norvegicus OX=10116 GN=Ac...	[more]

BLAST of HG10022304 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G342	1.4e-48	72.33	26S proteasome non-ATPase regulatory subunit 10 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1KCY7	8.9e-48	71.70	26S proteasome non-ATPase regulatory subunit 10 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7TER9	1.3e-46	72.92	26S proteasome non-ATPase regulatory subunit 10 OS=Cucumis melo var. makuwa OX=1...	[more]
A0A0A0KTY4	1.3e-46	73.61	ANK_REP_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G484...	[more]
A0A1S3CPG1	1.3e-46	72.92	26S proteasome non-ATPase regulatory subunit 10 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of HG10022304 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03430.1	9.1e-29	51.69	Ankyrin repeat family protein	[more]
AT3G01750.1	1.8e-05	35.29	Ankyrin repeat family protein	[more]
AT3G09550.1	1.8e-05	29.59	Ankyrin repeat family protein	[more]
AT5G12320.1	9.2e-05	32.63	ankyrin repeat family protein	[more]
AT5G40160.1	2.0e-04	36.92	Ankyrin repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 49..78 e-value: 0.1 score: 21.7 coord: 85..114 e-value: 2.0 score: 17.4
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 85..109 score: 9.27054
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 19..108 e-value: 3.7E-9 score: 37.0
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 6..140 e-value: 7.4E-17 score: 63.4
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 19..154
None	No IPR available	PROSITE	PS50297	ANK_REP_REGION	coord: 85..109 score: 9.250726

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10022304.1	HG10022304.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0000976	transcription cis-regulatory region binding