HG10022300 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10022300
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Reticulon domain-containing protein
Location	Chr05: 22863520 .. 22866656 (-)
RNA-Seq Expression	HG10022300
Synteny	HG10022300

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAATCGCACGATCAACTGCAAGACAGAAGTAGGCAAACCCTTTGTAGCTTTGATTTGCGGTTCATTGGTTTATTACCATTGCGCCTATCGAAATTCCAGTCTCCTCTCCCTTGTCGCTGACGTTTTGATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCTTCCGCCATATGAATGTCTCGTAAGCTTTCCTTCTTTTTCCTCTTTCTGCCAAATTATGTGTTTTCTTTGAATCGTTTGTTGGATAAACAGATTATCCCGTTCCTTTGATGCCTATGATGCTTCTAGGGTATTTACTAGATTTGAGAACTTCTTGGAGATTGTCTTAAATGGTTGGGATTTTGATAAGAGTTCAATGTCAACGATCGTATTTGTCTAGTCGGTTTCAATTTCCTAGAAATGCAATGTTGTTGAACTTAGATGCTCCATCTATATGCATGTCCCTATCCTCGTAATGATCTTGGATTTATATAATTTGAATGCTAAAATTCAAATGATCTGTAGGGTACCAGTGGACCCTCTTGAGTGGCAAATATCGCAGGATACTGCTAATAGTATGATTGCTTGGTTAGCCAATACCATAGGTGCGGCTGAGTCTGTTCTGAGGGTGGCAGCAACAGGGCATGATAAGAGGCTTTTTGTTAAGGTATTGCTCTTCGATTGTCATTAATTTGTACATTAGTGGCCTTCTACACAGTTTTGGTTAGTATTAACTAAGCTTCTTTCAGTGAGTTTTGGGTTATTGTATGAACTCGAATAGGATTTTTTCGGTTATTGTATGAACTCGAATAGGATTTTTTCTTCTTTTTTTAACTTTTATTTTCTCTGTGAAACATAACTTCCTTCGTTAAAAAAAGAGGGGTATCCCCTGTACCAAAGGAAATTACAAAAAAAAAACACTCACACTGGGCTATAAGAGTAGTAAGACTATAGGTACCCAACAAGTAAGTCGAGAACATACGCCAAGAGCAGCAAGATTAGAAAGATGTTAAAAGAGCAATCAAAGTCCTTTTTCCTTTTCCTCAGAAGTACAATGTTTTCTTCAATCTAAATGGACCATAGAAAGGCCCTTATGAAATTGAGCCAAATAACTTCCCTGTCTTTCTTGAGTAGATGGCCGATTAGCACAGATTCCAGTAATGATAAAGAGTCCCTTGGTAGAGCCATGGACCAATTGGAAACAAAAAGATGGTCTTCCAAAAGGCCAGTATCAAGACTTTGAAGTTTTCTATCTATTTTTCCATCCAAAATCTTCCTCAATTATAGCGTATGTTTTAATTAAGGTCGATCGGACGGCTCTTTTGTTATCACTTCGGCAGTAGTTTGGGTTACAGTATGTCATCTTCCTAAATCTTTTTTCTGTAAACTGACATTTTGGAACAAGTGTTTTCCTACCACCTTCCTTGAACAAGATTTGTTCTTTGGGTTATACAACTGTATCCTTATCCTTGAGTTCTGGCAAGCATTTTCCTTCTTTTATAACTAAAAAAACTTAGTATGCGAGCATTTCTGTACCATTACTTATAGTGAACCTAGACAGATTTATATAAACATGTCTGAGTGCCACGTGAATTCAAACCTTTCTTACAAGTTACAACGCATGCAAGGAGTCCAAAATGGTATATTGTAAAAATAAATAAATATGTATATCTATTAGACAAATTGCACAACCGAGGTATTTGTTCATTTAGATAAAATAATGAACATCATGTAATTGGTATCAGCAGCACGTATTATATGTCAAAATGATACAAATACTGCTCAATTTTAGTATATTTAATTATGTCCATCAACTTTGAAAATTTTCATTTTAATCTTTAAACTTCGAAATTGTTCCAATAAATACATTTAAAAATTCTCTCTGGGCGTCTATGATGAGTTCTTTTTTAATTATTTATTAGGTCATATTTTGTTAGATTGGAGACCCTTCTTCTAGGATGCTTCCTTTTGTGGGCTTGGTTTGTTTGTATGTCCTTGTATTCTTTCATTTTTTTTATCAATGAAAGATGGTCCTTTATAAAAAAATATAAAACATAATAATGTACCCAGCAACTATGGTGTAAAATTTGGAACACATACATAATATCATTTACAACATTATAAATACAACTTAATGTGACAACTGATATGTAAAACTTGATTTCGTGAATAATGTTATAAATGATGTTAATGATATCTTGTTGTATTGAAATAAATGGTAATGACGATCTTAATAGTTTATATAGTTGAAATTGAGTTGTAAATTATGCTACATATGCTTTTCAATTTATACATTTAGTTGCCGCATCAATTAATGTCCTTCGCTTTAACAATAAAAAGGGGAAACCGCTAAAAAATATTGAACATGTGGGAGGATCCGAACAAATTCTGGTTTCATTTCCCCCTATAGAGGTTAGCTTACAAAAGGTTCAAGAGTTAAAATGAAACTTTTCAAAGTTTAAGGATATAAATGAAACTTACTTCAAAACTCTGGAGTATTATACACCTGGTATATGTGACCGTTTGCAAGAGCTAAGTTGCTCTACCAGATAAGGTCTTTCAGAGAACCATATAACTGTATTGATCTTTCATCTTGTGCTTGTAAATTAAAGTGATGCAAATCTTTCTGTAGGTCGTTGTTTGCCTTTACGCTCTCTCAGTGCTTGGAAGATTGGTTTCAGGTGTTACAGTTGCCTACACTGGTATGTCTGGCCTTTCTACTTGTCTATATTTCTTCTATCTTACAAGAAAATAAATATGCATGACGACTTGATAGGACATTTTTCTATGCTCTTCATATTTAATTCTTTTACAACTCGTCTTGTGGTGGGGCATTGCAGTATAATTTGTTTTACCATCTGATTTGTCACTTAGCAATTACACATACCCTATTCGCAATTTCTCTACACTTCTGTTATAATTTTTAAAGATTAATCCGAGGCGCATTTCTGTTTACGTTGGAGATAATAAGATCCTTTTTGCAAATTTATGGAACTAATCTGTCATTGATGCTAGTAGTTCTGGATTAACAGGTTTATGCATGTTGTGTATATACATGGTGTTGGAGAATTCTGAGTCAATAAGTGCTTCTATTTCTCCTTTCCTTAAGAGAGGAAACGACCCTACTCCACATCAAGATGACATCTAA

mRNA sequence

ATGGCGAATCGCACGATCAACTGCAAGACAGAAGTAGGCAAACCCTTTGTAGCTTTGATTTGCGGTTCATTGGTTTATTACCATTGCGCCTATCGAAATTCCAGTCTCCTCTCCCTTGTCGCTGACGTTTTGATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCTTCCGCCATATGAATGTCTCGGTACCAGTGGACCCTCTTGAGTGGCAAATATCGCAGGATACTGCTAATAGTATGATTGCTTGGTTAGCCAATACCATAGGTGCGGCTGAGTCTGTTCTGAGGGTGGCAGCAACAGGGCATGATAAGAGGCTTTTTGTTAAGGTCGTTGTTTGCCTTTACGCTCTCTCAGTGCTTGGAAGATTGGTTTCAGGTGTTACAGTTGCCTACACTGGTTTATGCATGTTGTGTATATACATGGTGTTGGAGAATTCTGAGTCAATAAGTGCTTCTATTTCTCCTTTCCTTAAGAGAGGAAACGACCCTACTCCACATCAAGATGACATCTAA

Coding sequence (CDS)

ATGGCGAATCGCACGATCAACTGCAAGACAGAAGTAGGCAAACCCTTTGTAGCTTTGATTTGCGGTTCATTGGTTTATTACCATTGCGCCTATCGAAATTCCAGTCTCCTCTCCCTTGTCGCTGACGTTTTGATCGTTCTCCTTTGCTCTCTCGCCATTCTCGGCCTTCTCTTCCGCCATATGAATGTCTCGGTACCAGTGGACCCTCTTGAGTGGCAAATATCGCAGGATACTGCTAATAGTATGATTGCTTGGTTAGCCAATACCATAGGTGCGGCTGAGTCTGTTCTGAGGGTGGCAGCAACAGGGCATGATAAGAGGCTTTTTGTTAAGGTCGTTGTTTGCCTTTACGCTCTCTCAGTGCTTGGAAGATTGGTTTCAGGTGTTACAGTTGCCTACACTGGTTTATGCATGTTGTGTATATACATGGTGTTGGAGAATTCTGAGTCAATAAGTGCTTCTATTTCTCCTTTCCTTAAGAGAGGAAACGACCCTACTCCACATCAAGATGACATCTAA

Protein sequence

MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI

Homology

[Close]

BLAST of HG10022300 vs. NCBI nr
Match: XP_038889154.1 (reticulon-like protein B22 [Benincasa hispida])

HSP 1 Score: 324.7 bits (831), Expect = 4.8e-85
Identity = 165/172 (95.93%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRH 60
           MANRTINCKTEVGKPFVALICGSL+YYHCAYRNSSLLSLVADV IVLLCSLAILGLLFRH
Sbjct: 16  MANRTINCKTEVGKPFVALICGSLIYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 75

Query: 61  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 120
           MNVSVPVDPLEWQISQDTANSM+AWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS
Sbjct: 76  MNVSVPVDPLEWQISQDTANSMVAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 135

Query: 121 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI 173
           VLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPF++RGNDPT HQD I
Sbjct: 136 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFIRRGNDPTSHQDAI 187

[Close]

BLAST of HG10022300 vs. NCBI nr
Match: XP_011655303.1 (reticulon-like protein B22 [Cucumis sativus] >KGN51194.1 hypothetical protein Csa_009004 [Cucumis sativus])

HSP 1 Score: 315.5 bits (807), Expect = 2.9e-82
Identity = 161/172 (93.60%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 1   MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRH 60
           MA+R+INCKTEVGKPFVALICGSLVYYHCA+RNSSLLSLVADV IVLLCSLAILGLLFRH
Sbjct: 17  MASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRH 76

Query: 61  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 120
           MNVSVPVDPLEWQ+SQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS
Sbjct: 77  MNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 136

Query: 121 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI 173
           VLGRLVSGVTVAYTGLCMLCIYMVLENSESISA+ISP L+RGN+ T HQDDI
Sbjct: 137 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI 188

[Close]

BLAST of HG10022300 vs. NCBI nr
Match: XP_008465703.1 (PREDICTED: reticulon-like protein B22 isoform X2 [Cucumis melo])

HSP 1 Score: 313.2 bits (801), Expect = 1.4e-81
Identity = 161/172 (93.60%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRH 60
           MA+R+INCKTEVGKPFVAL CGSLVYYHCA+RNSSLLSLVADV IVLLCSLAILGLLFRH
Sbjct: 16  MASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRH 75

Query: 61  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 120
           MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS
Sbjct: 76  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 135

Query: 121 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI 173
           VLGRLVSGVTVAYTGLCMLCIYMVLENSESISA+ISPFL+RGN+ T HQD I
Sbjct: 136 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI 187

[Close]

BLAST of HG10022300 vs. NCBI nr
Match: XP_022952032.1 (reticulon-like protein B22 isoform X1 [Cucurbita moschata] >XP_022973272.1 reticulon-like protein B22 isoform X1 [Cucurbita maxima] >XP_023536692.1 reticulon-like protein B22 isoform X1 [Cucurbita pepo subsp. pepo] >KAG6585840.1 Reticulon-like protein B22, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 312.4 bits (799), Expect = 2.5e-81
Identity = 161/172 (93.60%), Postives = 165/172 (95.93%), Query Frame = 0


Query: 1   MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRH 60
           MANR+I+CKTEVGKP VALICGSLVYYHCAYRNSSLLSLVADV IVLLCSLAILGLLFRH
Sbjct: 16  MANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 75

Query: 61  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 120
           MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKV+V LYALS
Sbjct: 76  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVIVSLYALS 135

Query: 121 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI 173
           VLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISPFL+RGNDP  HQD I
Sbjct: 136 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI 187

[Close]

BLAST of HG10022300 vs. NCBI nr
Match: XP_022150304.1 (reticulon-like protein B22 [Momordica charantia])

HSP 1 Score: 298.5 bits (763), Expect = 3.7e-77
Identity = 150/172 (87.21%), Postives = 161/172 (93.60%), Query Frame = 0


Query: 1   MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRH 60
           MANRTI+  T++GKP VALICGSLVYYHCA+RNSSLLSLVADV IVLLCSLAILGLLFRH
Sbjct: 13  MANRTIHSTTQLGKPMVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRH 72

Query: 61  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 120
           MN+SVPVDPLEWQISQDTAN ++AWLANTIGAAESVLRVAATGHDKRLF+KVVVCLYALS
Sbjct: 73  MNISVPVDPLEWQISQDTANGLVAWLANTIGAAESVLRVAATGHDKRLFLKVVVCLYALS 132

Query: 121 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI 173
           VLGRLVSGVTVAYTGLCMLC+YMVLENSES S S+ PF +RGNDPT HQD I
Sbjct: 133 VLGRLVSGVTVAYTGLCMLCVYMVLENSESTSGSVFPFSRRGNDPTSHQDAI 184

[Close]

BLAST of HG10022300 vs. ExPASy Swiss-Prot
Match: Q8GWH5 (Reticulon-like protein B22 OS=Arabidopsis thaliana OX=3702 GN=RTNLB22 PE=2 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.0e-54
Identity = 111/160 (69.38%), Postives = 132/160 (82.50%), Query Frame = 0


Query: 11  EVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPL 70
           E+GK    LI G+LVYYHCAYRN++LLSL +DV IVLLCSLAILGLLFR +NVSVPVDPL
Sbjct: 3   EMGKAMGLLISGTLVYYHCAYRNATLLSLFSDVFIVLLCSLAILGLLFRQLNVSVPVDPL 62

Query: 71  EWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVT 130
           EWQISQDTA++++A LANT+GAAE VLRVAATGHDKRLFVKVV+CLY LS LGRL+SGVT
Sbjct: 63  EWQISQDTASNIVARLANTVGAAEGVLRVAATGHDKRLFVKVVICLYFLSALGRLISGVT 122

Query: 131 VAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQD 171
           VAY GLC+ C+ M+ + S+S+   +   LKRGN     Q+
Sbjct: 123 VAYAGLCLFCLSMLCQTSQSLGNCV---LKRGNGQILEQE 159

[Close]

BLAST of HG10022300 vs. ExPASy Swiss-Prot
Match: P0C941 (Reticulon-like protein B23 OS=Arabidopsis thaliana OX=3702 GN=RTNLB23 PE=2 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.3e-50
Identity = 101/138 (73.19%), Postives = 122/138 (88.41%), Query Frame = 0


Query: 11  EVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPL 70
           E+GK    LI G+LVY+HCA RN++LLSL++DVLIVLL SLAILGLLFRH+NVSVPVDPL
Sbjct: 3   EMGKAIGLLISGTLVYHHCANRNATLLSLISDVLIVLLSSLAILGLLFRHLNVSVPVDPL 62

Query: 71  EWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVT 130
           EWQISQDTA +++A LANT+GAAESVLRVAATGHDKRLFVKVV+CLY L+ LGR++SGVT
Sbjct: 63  EWQISQDTACNIVARLANTVGAAESVLRVAATGHDKRLFVKVVICLYFLAALGRIISGVT 122

Query: 131 VAYTGLCMLCIYMVLENS 149
           +AY GLC+ C+ M+  +S
Sbjct: 123 IAYAGLCLFCLSMLFRSS 140

[Close]

BLAST of HG10022300 vs. ExPASy TrEMBL
Match: A0A0A0KQM7 (Reticulon domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G487710 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 1.4e-82
Identity = 161/172 (93.60%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 1   MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRH 60
           MA+R+INCKTEVGKPFVALICGSLVYYHCA+RNSSLLSLVADV IVLLCSLAILGLLFRH
Sbjct: 17  MASRSINCKTEVGKPFVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRH 76

Query: 61  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 120
           MNVSVPVDPLEWQ+SQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS
Sbjct: 77  MNVSVPVDPLEWQVSQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 136

Query: 121 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI 173
           VLGRLVSGVTVAYTGLCMLCIYMVLENSESISA+ISP L+RGN+ T HQDDI
Sbjct: 137 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPILRRGNERTSHQDDI 188

[Close]

BLAST of HG10022300 vs. ExPASy TrEMBL
Match: A0A1S3CPH6 (reticulon-like protein B22 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503325 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 7.0e-82
Identity = 161/172 (93.60%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRH 60
           MA+R+INCKTEVGKPFVAL CGSLVYYHCA+RNSSLLSLVADV IVLLCSLAILGLLFRH
Sbjct: 16  MASRSINCKTEVGKPFVALTCGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRH 75

Query: 61  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 120
           MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS
Sbjct: 76  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 135

Query: 121 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI 173
           VLGRLVSGVTVAYTGLCMLCIYMVLENSESISA+ISPFL+RGN+ T HQD I
Sbjct: 136 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISAAISPFLRRGNERTSHQDAI 187

[Close]

BLAST of HG10022300 vs. ExPASy TrEMBL
Match: A0A6J1I734 (reticulon-like protein B22 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471842 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.2e-81
Identity = 161/172 (93.60%), Postives = 165/172 (95.93%), Query Frame = 0


Query: 1   MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRH 60
           MANR+I+CKTEVGKP VALICGSLVYYHCAYRNSSLLSLVADV IVLLCSLAILGLLFRH
Sbjct: 16  MANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 75

Query: 61  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 120
           MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKV+V LYALS
Sbjct: 76  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVIVSLYALS 135

Query: 121 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI 173
           VLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISPFL+RGNDP  HQD I
Sbjct: 136 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI 187

[Close]

BLAST of HG10022300 vs. ExPASy TrEMBL
Match: A0A6J1GJ96 (reticulon-like protein B22 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454742 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.2e-81
Identity = 161/172 (93.60%), Postives = 165/172 (95.93%), Query Frame = 0


Query: 1   MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRH 60
           MANR+I+CKTEVGKP VALICGSLVYYHCAYRNSSLLSLVADV IVLLCSLAILGLLFRH
Sbjct: 16  MANRSISCKTEVGKPLVALICGSLVYYHCAYRNSSLLSLVADVFIVLLCSLAILGLLFRH 75

Query: 61  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 120
           MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKV+V LYALS
Sbjct: 76  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVIVSLYALS 135

Query: 121 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI 173
           VLGRLVSGVTVAYTGLCMLCIYMVLENSESISA ISPFL+RGNDP  HQD I
Sbjct: 136 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISAFISPFLRRGNDPISHQDSI 187

[Close]

BLAST of HG10022300 vs. ExPASy TrEMBL
Match: A0A6J1D9M0 (reticulon-like protein B22 OS=Momordica charantia OX=3673 GN=LOC111018504 PE=4 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.8e-77
Identity = 150/172 (87.21%), Postives = 161/172 (93.60%), Query Frame = 0


Query: 1   MANRTINCKTEVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRH 60
           MANRTI+  T++GKP VALICGSLVYYHCA+RNSSLLSLVADV IVLLCSLAILGLLFRH
Sbjct: 13  MANRTIHSTTQLGKPMVALICGSLVYYHCAFRNSSLLSLVADVFIVLLCSLAILGLLFRH 72

Query: 61  MNVSVPVDPLEWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALS 120
           MN+SVPVDPLEWQISQDTAN ++AWLANTIGAAESVLRVAATGHDKRLF+KVVVCLYALS
Sbjct: 73  MNISVPVDPLEWQISQDTANGLVAWLANTIGAAESVLRVAATGHDKRLFLKVVVCLYALS 132

Query: 121 VLGRLVSGVTVAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQDDI 173
           VLGRLVSGVTVAYTGLCMLC+YMVLENSES S S+ PF +RGNDPT HQD I
Sbjct: 133 VLGRLVSGVTVAYTGLCMLCVYMVLENSESTSGSVFPFSRRGNDPTSHQDAI 184

[Close]

BLAST of HG10022300 vs. TAIR 10
Match: AT1G78895.1 (Reticulon family protein )

HSP 1 Score: 213.4 bits (542), Expect = 1.4e-55
Identity = 111/160 (69.38%), Postives = 132/160 (82.50%), Query Frame = 0


Query: 11  EVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPL 70
           E+GK    LI G+LVYYHCAYRN++LLSL +DV IVLLCSLAILGLLFR +NVSVPVDPL
Sbjct: 3   EMGKAMGLLISGTLVYYHCAYRNATLLSLFSDVFIVLLCSLAILGLLFRQLNVSVPVDPL 62

Query: 71  EWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVT 130
           EWQISQDTA++++A LANT+GAAE VLRVAATGHDKRLFVKVV+CLY LS LGRL+SGVT
Sbjct: 63  EWQISQDTASNIVARLANTVGAAEGVLRVAATGHDKRLFVKVVICLYFLSALGRLISGVT 122

Query: 131 VAYTGLCMLCIYMVLENSESISASISPFLKRGNDPTPHQD 171
           VAY GLC+ C+ M+ + S+S+   +   LKRGN     Q+
Sbjct: 123 VAYAGLCLFCLSMLCQTSQSLGNCV---LKRGNGQILEQE 159

[Close]

BLAST of HG10022300 vs. TAIR 10
Match: AT1G16825.1 (Reticulon family protein )

HSP 1 Score: 199.9 bits (507), Expect = 1.7e-51
Identity = 101/138 (73.19%), Postives = 122/138 (88.41%), Query Frame = 0


Query: 11  EVGKPFVALICGSLVYYHCAYRNSSLLSLVADVLIVLLCSLAILGLLFRHMNVSVPVDPL 70
           E+GK    LI G+LVY+HCA RN++LLSL++DVLIVLL SLAILGLLFRH+NVSVPVDPL
Sbjct: 3   EMGKAIGLLISGTLVYHHCANRNATLLSLISDVLIVLLSSLAILGLLFRHLNVSVPVDPL 62

Query: 71  EWQISQDTANSMIAWLANTIGAAESVLRVAATGHDKRLFVKVVVCLYALSVLGRLVSGVT 130
           EWQISQDTA +++A LANT+GAAESVLRVAATGHDKRLFVKVV+CLY L+ LGR++SGVT
Sbjct: 63  EWQISQDTACNIVARLANTVGAAESVLRVAATGHDKRLFVKVVICLYFLAALGRIISGVT 122

Query: 131 VAYTGLCMLCIYMVLENS 149
           +AY GLC+ C+ M+  +S
Sbjct: 123 IAYAGLCLFCLSMLFRSS 140

The following BLAST results are available for this feature:

BLAST of HG10022300 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889154.1	4.8e-85	95.93	reticulon-like protein B22 [Benincasa hispida]	[more]
XP_011655303.1	2.9e-82	93.60	reticulon-like protein B22 [Cucumis sativus] >KGN51194.1 hypothetical protein Cs...	[more]
XP_008465703.1	1.4e-81	93.60	PREDICTED: reticulon-like protein B22 isoform X2 [Cucumis melo]	[more]
XP_022952032.1	2.5e-81	93.60	reticulon-like protein B22 isoform X1 [Cucurbita moschata] >XP_022973272.1 retic...	[more]
XP_022150304.1	3.7e-77	87.21	reticulon-like protein B22 [Momordica charantia]	[more]

BLAST of HG10022300 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWH5	2.0e-54	69.38	Reticulon-like protein B22 OS=Arabidopsis thaliana OX=3702 GN=RTNLB22 PE=2 SV=1	[more]
P0C941	2.3e-50	73.19	Reticulon-like protein B23 OS=Arabidopsis thaliana OX=3702 GN=RTNLB23 PE=2 SV=1	[more]

BLAST of HG10022300 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQM7	1.4e-82	93.60	Reticulon domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G487710 P...	[more]
A0A1S3CPH6	7.0e-82	93.60	reticulon-like protein B22 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503325 PE...	[more]
A0A6J1I734	1.2e-81	93.60	reticulon-like protein B22 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11147184...	[more]
A0A6J1GJ96	1.2e-81	93.60	reticulon-like protein B22 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111454...	[more]
A0A6J1D9M0	1.8e-77	87.21	reticulon-like protein B22 OS=Momordica charantia OX=3673 GN=LOC111018504 PE=4 S...	[more]

BLAST of HG10022300 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G78895.1	1.4e-55	69.38	Reticulon family protein	[more]
AT1G16825.1	1.7e-51	73.19	Reticulon family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003388	Reticulon	PFAM	PF02453	Reticulon	coord: 16..141 e-value: 5.9E-17 score: 62.1
IPR044177	Reticulon-like protein B22/B23	PANTHER	PTHR47879	RETICULON-LIKE PROTEIN B22	coord: 5..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10022300.1	HG10022300.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane