HG10022294 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10022294
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RRM domain-containing protein
Location	Chr05: 22767402 .. 22767917 (+)
RNA-Seq Expression	HG10022294
Synteny	HG10022294

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTCGATTCCCGGTCTCTTCACTGCCGTTTCATCACGATTTGGCCGTCAGTGCAACACAGTTGCCATTACAACTCTCCCAATTCGACAAAATTCCGGCCACCCCATTTCCGTTTGTCTCTTGTCCATGGCTCAGGACCAATGGGGTTTCCTGTTTTTGCCATGAAGAGGTCTGGGAAAGGCGGCATTGGCCTCACTGAGCAGAGTGATTCCGACATTGAGTTCGATGAATTTTTCGATGAGGATGAGGATGATTTTCAGGAGGAGGATGAGGATGAGATTCTTTTGCCGTTAAAGAATACGAGAGAGTGGCATGCGGCGAGGCCTCGTGGATTTGGAGAAGGGAAGGAGTATGACACCTCAATTGAAGACAAATTGCTACAAGAAATGGAGCAGAGTAGGGAAGCTCAGGCTACAAATATCAATAAGCTCAAGAATCAGTCTTCTTCTGAGCCCAACTCTAGTAGAAATGTCGTACAGATAGCAGGCCAGTCTCAATCTCTCTCAGTTTTTTAG

mRNA sequence

ATGCTCGATTCCCGGTCTCTTCACTGCCGTTTCATCACGATTTGGCCGTCAGTGCAACACAGTTGCCATTACAACTCTCCCAATTCGACAAAATTCCGGCCACCCCATTTCCGTTTGTCTCTTGTCCATGGCTCAGGACCAATGGGGTTTCCTGTTTTTGCCATGAAGAGGTCTGGGAAAGGCGGCATTGGCCTCACTGAGCAGAGTGATTCCGACATTGAGTTCGATGAATTTTTCGATGAGGATGAGGATGATTTTCAGGAGGAGGATGAGGATGAGATTCTTTTGCCGTTAAAGAATACGAGAGAGTGGCATGCGGCGAGGCCTCGTGGATTTGGAGAAGGGAAGGAGTATGACACCTCAATTGAAGACAAATTGCTACAAGAAATGGAGCAGAGTAGGGAAGCTCAGGCTACAAATATCAATAAGCTCAAGAATCAGTCTTCTTCTGAGCCCAACTCTAGTAGAAATGTCGTACAGATAGCAGGCCAGTCTCAATCTCTCTCAGTTTTTTAG

Coding sequence (CDS)

ATGCTCGATTCCCGGTCTCTTCACTGCCGTTTCATCACGATTTGGCCGTCAGTGCAACACAGTTGCCATTACAACTCTCCCAATTCGACAAAATTCCGGCCACCCCATTTCCGTTTGTCTCTTGTCCATGGCTCAGGACCAATGGGGTTTCCTGTTTTTGCCATGAAGAGGTCTGGGAAAGGCGGCATTGGCCTCACTGAGCAGAGTGATTCCGACATTGAGTTCGATGAATTTTTCGATGAGGATGAGGATGATTTTCAGGAGGAGGATGAGGATGAGATTCTTTTGCCGTTAAAGAATACGAGAGAGTGGCATGCGGCGAGGCCTCGTGGATTTGGAGAAGGGAAGGAGTATGACACCTCAATTGAAGACAAATTGCTACAAGAAATGGAGCAGAGTAGGGAAGCTCAGGCTACAAATATCAATAAGCTCAAGAATCAGTCTTCTTCTGAGCCCAACTCTAGTAGAAATGTCGTACAGATAGCAGGCCAGTCTCAATCTCTCTCAGTTTTTTAG

Protein sequence

MLDSRSLHCRFITIWPSVQHSCHYNSPNSTKFRPPHFRLSLVHGSGPMGFPVFAMKRSGKGGIGLTEQSDSDIEFDEFFDEDEDDFQEEDEDEILLPLKNTREWHAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINKLKNQSSSEPNSSRNVVQIAGQSQSLSVF

Homology

[Close]

BLAST of HG10022294 vs. NCBI nr
Match: XP_038890170.1 (uncharacterized protein LOC120079826 [Benincasa hispida])

HSP 1 Score: 285.8 bits (730), Expect = 2.4e-73
Identity = 141/162 (87.04%), Postives = 148/162 (91.36%), Query Frame = 0


Query: 1   MLDSRSLHCRFITIWPSVQHSCHYNSPNSTKFRPPHFRLSLVHGSGPMGFPVFAMKRSGK 60
           M DS SL CRF+TIWPSVQH CHYNSPNSTKFRPPHF  SLVHGSGPMGFPVFAMKRSGK
Sbjct: 1   MFDSPSLQCRFVTIWPSVQHCCHYNSPNSTKFRPPHFSFSLVHGSGPMGFPVFAMKRSGK 60

Query: 61  GGIGLTEQSDSDIEFDEFFDEDEDDFQEEDEDEILLPLKNTREWHAARPRGFGEGKEYDT 120
           GG+ LTEQS+SDIEFD+FFDEDEDDFQ+EDEDEILLPLKNTREWH ARPRGFGEGK YDT
Sbjct: 61  GGMSLTEQSNSDIEFDDFFDEDEDDFQDEDEDEILLPLKNTREWHGARPRGFGEGKAYDT 120

Query: 121 SIEDKLLQEMEQSREAQATNINKLKNQSSSEPNSSRNVVQIA 163
           SIEDKLLQEMEQSREAQA NINKL NQS+SEP SSRN V+ A
Sbjct: 121 SIEDKLLQEMEQSREAQAANINKLNNQSTSEPKSSRNAVEKA 162

[Close]

BLAST of HG10022294 vs. NCBI nr
Match: KAA0040563.1 (glutamic acid-rich protein-like [Cucumis melo var. makuwa] >TYK05606.1 glutamic acid-rich protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 269.2 bits (687), Expect = 2.4e-68
Identity = 139/168 (82.74%), Postives = 147/168 (87.50%), Query Frame = 0


Query: 1   MLDSRSLHCRFITIWPSVQHSCHYNSPNSTKFRPPHFRLSLVHGSGPMGFPVFAMKRSGK 60
           MLDS  LHCRF TI P +QHSCHYNS NSTKFRPPH  LSL+ GSGPMGFPVFAMKR GK
Sbjct: 1   MLDSTPLHCRFTTIRPLLQHSCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPVFAMKRLGK 60

Query: 61  GGIGLTEQSDSDIEFDEFFDEDEDDFQEE------DEDEILLPLKNTREWHAARPRGFGE 120
           GGI LT+ SDSDI+FDEFFDEDED+FQ+E      DEDEILLPLKNTREWHAARPRGFGE
Sbjct: 61  GGIALTQPSDSDIDFDEFFDEDEDNFQDEDEDNFQDEDEILLPLKNTREWHAARPRGFGE 120

Query: 121 GKEYDTSIEDKLLQEMEQSREAQATNINKLKNQSSSEPNSSRNVVQIA 163
           GK YDTSIEDKLLQEMEQ REAQA NINKLKNQSSS+PNSSRNVV+IA
Sbjct: 121 GKVYDTSIEDKLLQEMEQIREAQAANINKLKNQSSSKPNSSRNVVEIA 168

[Close]

BLAST of HG10022294 vs. NCBI nr
Match: XP_008465688.1 (PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo] >XP_008465689.1 PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo] >XP_008465690.1 PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo] >XP_008465692.1 PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo] >XP_016903478.1 PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo])

HSP 1 Score: 266.9 bits (681), Expect = 1.2e-67
Identity = 138/168 (82.14%), Postives = 146/168 (86.90%), Query Frame = 0


Query: 1   MLDSRSLHCRFITIWPSVQHSCHYNSPNSTKFRPPHFRLSLVHGSGPMGFPVFAMKRSGK 60
           MLDS  LHCRF TI P +QHSCHYNS NSTKFRPPH  LSL+ GSGPMGFPVFAMKR GK
Sbjct: 1   MLDSTPLHCRFTTIRPLLQHSCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPVFAMKRLGK 60

Query: 61  GGIGLTEQSDSDIEFDEFFDEDEDDFQEE------DEDEILLPLKNTREWHAARPRGFGE 120
           GGI LT+ SDSDI+FDEFFDEDED+FQ+E      DEDEILLPLKNTREWHAARPRGFGE
Sbjct: 61  GGIALTQPSDSDIDFDEFFDEDEDNFQDEDEDNFQDEDEILLPLKNTREWHAARPRGFGE 120

Query: 121 GKEYDTSIEDKLLQEMEQSREAQATNINKLKNQSSSEPNSSRNVVQIA 163
           GK YDTSIEDKLLQEMEQ REAQA NINKLKNQ SS+PNSSRNVV+IA
Sbjct: 121 GKVYDTSIEDKLLQEMEQIREAQAANINKLKNQFSSKPNSSRNVVEIA 168

[Close]

BLAST of HG10022294 vs. NCBI nr
Match: KAE8648511.1 (hypothetical protein Csa_008404 [Cucumis sativus])

HSP 1 Score: 250.8 bits (639), Expect = 8.7e-63
Identity = 130/163 (79.75%), Postives = 138/163 (84.66%), Query Frame = 0


Query: 1   MLDSRSLHCRFITIWPSVQHSCHYNSPNSTKFRPPHFRLSLVHGSGPMGFPVFAMKRSGK 60
           M DS  LHC F TI P +QHSCHYNS  STKFRPPH  LSL+  SGPMGFPVFA+KR GK
Sbjct: 1   MFDSTPLHCPFTTICPLLQHSCHYNSSISTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 60

Query: 61  GGIGLTEQSDSDIEFDEFFDEDEDDFQEEDEDEILLPLKNTREWHAARPRGFGEGKEYDT 120
           GGI LTE SDSDI FDEFFDE ED+FQ  DED+ILLPLKNT+EWHAARPRGFGEGK YDT
Sbjct: 61  GGIALTEPSDSDIGFDEFFDEGEDNFQ--DEDDILLPLKNTKEWHAARPRGFGEGKVYDT 120

Query: 121 SIEDKLLQEMEQSREAQATNINKLKNQSSSEPNSSRNVVQIAG 164
           SIED LLQEMEQ REAQA NINKLK+QSSS PNSSRNVV+IAG
Sbjct: 121 SIEDNLLQEMEQIREAQAANINKLKDQSSSNPNSSRNVVEIAG 161

[Close]

BLAST of HG10022294 vs. NCBI nr
Match: XP_031741253.1 (uncharacterized protein LOC101210443 [Cucumis sativus] >XP_031741254.1 uncharacterized protein LOC101210443 [Cucumis sativus] >XP_031741255.1 uncharacterized protein LOC101210443 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 4.3e-62
Identity = 129/162 (79.63%), Postives = 137/162 (84.57%), Query Frame = 0


Query: 1   MLDSRSLHCRFITIWPSVQHSCHYNSPNSTKFRPPHFRLSLVHGSGPMGFPVFAMKRSGK 60
           M DS  LHC F TI P +QHSCHYNS  STKFRPPH  LSL+  SGPMGFPVFA+KR GK
Sbjct: 1   MFDSTPLHCPFTTICPLLQHSCHYNSSISTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 60

Query: 61  GGIGLTEQSDSDIEFDEFFDEDEDDFQEEDEDEILLPLKNTREWHAARPRGFGEGKEYDT 120
           GGI LTE SDSDI FDEFFDE ED+FQ  DED+ILLPLKNT+EWHAARPRGFGEGK YDT
Sbjct: 61  GGIALTEPSDSDIGFDEFFDEGEDNFQ--DEDDILLPLKNTKEWHAARPRGFGEGKVYDT 120

Query: 121 SIEDKLLQEMEQSREAQATNINKLKNQSSSEPNSSRNVVQIA 163
           SIED LLQEMEQ REAQA NINKLK+QSSS PNSSRNVV+IA
Sbjct: 121 SIEDNLLQEMEQIREAQAANINKLKDQSSSNPNSSRNVVEIA 160

[Close]

BLAST of HG10022294 vs. ExPASy TrEMBL
Match: A0A5D3C5E5 (Glutamic acid-rich protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G00620 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.1e-68
Identity = 139/168 (82.74%), Postives = 147/168 (87.50%), Query Frame = 0


Query: 1   MLDSRSLHCRFITIWPSVQHSCHYNSPNSTKFRPPHFRLSLVHGSGPMGFPVFAMKRSGK 60
           MLDS  LHCRF TI P +QHSCHYNS NSTKFRPPH  LSL+ GSGPMGFPVFAMKR GK
Sbjct: 1   MLDSTPLHCRFTTIRPLLQHSCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPVFAMKRLGK 60

Query: 61  GGIGLTEQSDSDIEFDEFFDEDEDDFQEE------DEDEILLPLKNTREWHAARPRGFGE 120
           GGI LT+ SDSDI+FDEFFDEDED+FQ+E      DEDEILLPLKNTREWHAARPRGFGE
Sbjct: 61  GGIALTQPSDSDIDFDEFFDEDEDNFQDEDEDNFQDEDEILLPLKNTREWHAARPRGFGE 120

Query: 121 GKEYDTSIEDKLLQEMEQSREAQATNINKLKNQSSSEPNSSRNVVQIA 163
           GK YDTSIEDKLLQEMEQ REAQA NINKLKNQSSS+PNSSRNVV+IA
Sbjct: 121 GKVYDTSIEDKLLQEMEQIREAQAANINKLKNQSSSKPNSSRNVVEIA 168

[Close]

BLAST of HG10022294 vs. ExPASy TrEMBL
Match: A0A1S3CPG6 (uncharacterized protein LOC103503317 OS=Cucumis melo OX=3656 GN=LOC103503317 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 5.7e-68
Identity = 138/168 (82.14%), Postives = 146/168 (86.90%), Query Frame = 0


Query: 1   MLDSRSLHCRFITIWPSVQHSCHYNSPNSTKFRPPHFRLSLVHGSGPMGFPVFAMKRSGK 60
           MLDS  LHCRF TI P +QHSCHYNS NSTKFRPPH  LSL+ GSGPMGFPVFAMKR GK
Sbjct: 1   MLDSTPLHCRFTTIRPLLQHSCHYNSSNSTKFRPPHLNLSLIQGSGPMGFPVFAMKRLGK 60

Query: 61  GGIGLTEQSDSDIEFDEFFDEDEDDFQEE------DEDEILLPLKNTREWHAARPRGFGE 120
           GGI LT+ SDSDI+FDEFFDEDED+FQ+E      DEDEILLPLKNTREWHAARPRGFGE
Sbjct: 61  GGIALTQPSDSDIDFDEFFDEDEDNFQDEDEDNFQDEDEILLPLKNTREWHAARPRGFGE 120

Query: 121 GKEYDTSIEDKLLQEMEQSREAQATNINKLKNQSSSEPNSSRNVVQIA 163
           GK YDTSIEDKLLQEMEQ REAQA NINKLKNQ SS+PNSSRNVV+IA
Sbjct: 121 GKVYDTSIEDKLLQEMEQIREAQAANINKLKNQFSSKPNSSRNVVEIA 168

[Close]

BLAST of HG10022294 vs. ExPASy TrEMBL
Match: A0A0A0KS07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G488780 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.6e-62
Identity = 129/163 (79.14%), Postives = 137/163 (84.05%), Query Frame = 0


Query: 1   MLDSRSLHCRFITIWPSVQHSCHYNSPNSTKFRPPHFRLSLVHGSGPMGFPVFAMKRSGK 60
           M DS  LHC F TI P +QHSCHYNS  STKFRPPH  LSL+  SGPMGFPVFA+KR GK
Sbjct: 41  MFDSTPLHCPFTTICPLLQHSCHYNSSISTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 100

Query: 61  GGIGLTEQSDSDIEFDEFFDEDEDDFQEEDEDEILLPLKNTREWHAARPRGFGEGKEYDT 120
           GGI LTE SDSDI FDEFFDE ED+FQ  DED+ILLPLKNT+EWHAARPRGFGEGK YDT
Sbjct: 101 GGIALTEPSDSDIGFDEFFDEGEDNFQ--DEDDILLPLKNTKEWHAARPRGFGEGKVYDT 160

Query: 121 SIEDKLLQEMEQSREAQATNINKLKNQSSSEPNSSRNVVQIAG 164
           SIED LLQEMEQ REAQA NINKLK+QS S PNSSRNVV+IAG
Sbjct: 161 SIEDNLLQEMEQIREAQAANINKLKDQSPSNPNSSRNVVEIAG 201

[Close]

BLAST of HG10022294 vs. ExPASy TrEMBL
Match: A0A0A0KQN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G488800 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.1e-62
Identity = 129/162 (79.63%), Postives = 137/162 (84.57%), Query Frame = 0


Query: 1   MLDSRSLHCRFITIWPSVQHSCHYNSPNSTKFRPPHFRLSLVHGSGPMGFPVFAMKRSGK 60
           M DS  LHC F TI P +QHSCHYNS  STKFRPPH  LSL+  SGPMGFPVFA+KR GK
Sbjct: 41  MFDSTPLHCPFTTICPLLQHSCHYNSSISTKFRPPHLNLSLIQASGPMGFPVFAVKRLGK 100

Query: 61  GGIGLTEQSDSDIEFDEFFDEDEDDFQEEDEDEILLPLKNTREWHAARPRGFGEGKEYDT 120
           GGI LTE SDSDI FDEFFDE ED+FQ  DED+ILLPLKNT+EWHAARPRGFGEGK YDT
Sbjct: 101 GGIALTEPSDSDIGFDEFFDEGEDNFQ--DEDDILLPLKNTKEWHAARPRGFGEGKVYDT 160

Query: 121 SIEDKLLQEMEQSREAQATNINKLKNQSSSEPNSSRNVVQIA 163
           SIED LLQEMEQ REAQA NINKLK+QSSS PNSSRNVV+IA
Sbjct: 161 SIEDNLLQEMEQIREAQAANINKLKDQSSSNPNSSRNVVEIA 200

[Close]

BLAST of HG10022294 vs. ExPASy TrEMBL
Match: A0A6J1KJD4 (uncharacterized protein LOC111493728 OS=Cucurbita maxima OX=3661 GN=LOC111493728 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 5.0e-48
Identity = 115/173 (66.47%), Postives = 124/173 (71.68%), Query Frame = 0


Query: 1   MLDSRSLHCRFITIWPSVQHSCHYNS--------------PNSTKFRPPHFRLSLVHGSG 60
           MLDS  LHCRFIT WPS  HS   NS              PNSTKFR  HF LSLVHG  
Sbjct: 23  MLDSPPLHCRFITTWPSAPHSRRNNSLLLPTPYYNLQPCNPNSTKFRSLHFSLSLVHGPR 82

Query: 61  PMGFPVFAMKRSGKGGIGLTEQSDSDIEFDEFFDEDEDDFQEEDEDEILLPLKNTREWHA 120
           PM FPVF++K+ GKGG+ LT QSDSDIEFD   DED D       DE+LLPL N REW A
Sbjct: 83  PMYFPVFSLKKRGKGGVSLTNQSDSDIEFDG--DEDLDG------DEMLLPLANMREWLA 142

Query: 121 ARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINKLKNQSSSEPNSSRNVV 160
           ARPRGFGEGKEYDTSIE+KLLQE+EQSR+AQA NINKLK+Q  S PNSSRNVV
Sbjct: 143 ARPRGFGEGKEYDTSIEEKLLQEIEQSRKAQAANINKLKSQPPSNPNSSRNVV 187

[Close]

BLAST of HG10022294 vs. TAIR 10
Match: AT1G70200.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 80.5 bits (197), Expect = 1.5e-15
Identity = 55/124 (44.35%), Postives = 75/124 (60.48%), Query Frame = 0


Query: 49  GFPVFAMKRSGKGGIGLTEQSDSDIEFD----EFFDEDEDDFQEEDEDEILLPLKNTREW 108
           GF  FA+ +   G   + E  D D E D    EF  EDE + +EEDE E  LP+   ++W
Sbjct: 62  GFCSFAVNKRRSGDSVIVESDDDDEEDDEDWGEFDGEDEGEEEEEDEGE-FLPMDKMKKW 121

Query: 109 HAARPRGFGEGKEYDTSIEDKLLQEMEQSREAQATNINKLKNQ--SSSEPNSSRNVVQIA 167
              +PRGFG GK+Y+T IEDKLL E+EQS +AQA N+NKLKN    S +     N+++  
Sbjct: 122 LEKKPRGFGLGKKYETLIEDKLLDEIEQSWKAQAANLNKLKNDPLKSQQLKRDDNLLKGT 181

The following BLAST results are available for this feature:

BLAST of HG10022294 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890170.1	2.4e-73	87.04	uncharacterized protein LOC120079826 [Benincasa hispida]	[more]
KAA0040563.1	2.4e-68	82.74	glutamic acid-rich protein-like [Cucumis melo var. makuwa] >TYK05606.1 glutamic ...	[more]
XP_008465688.1	1.2e-67	82.14	PREDICTED: uncharacterized protein LOC103503317 [Cucumis melo] >XP_008465689.1 P...	[more]
KAE8648511.1	8.7e-63	79.75	hypothetical protein Csa_008404 [Cucumis sativus]	[more]
XP_031741253.1	4.3e-62	79.63	uncharacterized protein LOC101210443 [Cucumis sativus] >XP_031741254.1 uncharact...	[more]

BLAST of HG10022294 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10022294 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3C5E5	1.1e-68	82.74	Glutamic acid-rich protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A1S3CPG6	5.7e-68	82.14	uncharacterized protein LOC103503317 OS=Cucumis melo OX=3656 GN=LOC103503317 PE=...	[more]
A0A0A0KS07	1.6e-62	79.14	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G488780 PE=4 SV=1	[more]
A0A0A0KQN3	2.1e-62	79.63	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G488800 PE=4 SV=1	[more]
A0A6J1KJD4	5.0e-48	66.47	uncharacterized protein LOC111493728 OS=Cucurbita maxima OX=3661 GN=LOC111493728...	[more]

BLAST of HG10022294 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G70200.1	1.5e-15	44.35	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 127..147
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 132..171
None	No IPR available	PANTHER	PTHR37200	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 14..157

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10022294.1	HG10022294.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding