HG10022247 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10022247
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	photosynthetic NDH subunit of lumenal location 1, chloroplastic
Location	Chr05: 22293474 .. 22295775 (+)
RNA-Seq Expression	HG10022247
Synteny	HG10022247

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGTTTCAACCTCTTGCTTGAGTTGGGTTCCCACCACCGCCTCCAATTGGAAGGTTAGTGTATTCATTTACATTTACCAATCTTGCAGGACCCAGTTCTTGCTTCTCATTGTGCTTTAATTCCAGCTGAGGTTGCTTCCTTTCAATGAGCCTTCAACAGCTACTTGTTCATTTTCTTCCTGTAGTACCATCAATTGCTCAACTGAGAGAACTTCCCGTGAGGAAGGTAAGATTTGCAATCTTAAGTTTTATGTTTAAATCCAATGCTTAGAGTCGTTTTGTGATTCAATTTACTTTTGTTGTGCCCCCTCCATGAGCTTTTAAAGATTTGCAGCTTCAGAATGACTGCCATGCCGATTGCCGATTTTAATGATTTTTCCTTTTGGTTTCGTAACTTGTGCGATGGAAATGCTTGTTTAGTACTTATTTGGATTGCTTATTCTTGGAATTCGTGAGTAAATTTAGAATTCTGTGTGGAATTATATGAACCTTGTAGCTTGCATGCAAGGTGTTTGTACAAATGTGTAAACCAAAATTGCTTAGAAGAAATAGGTTCAAACTATTGTTGTAACCTTTCTAGGAATTAAAATGCTACAAATTTACTTGGAACCAAGTGTAGTATGTTAGGTAGTTTCCGTGTGAGATTAATAGAGGTGTGCACATATTAGCCGAGACAGTCCTGGATATTTGAAAAGGAAAAACTCTGTACTTATCTTGGTTGAACATCAACATTGTGAGAAGCGGTCATGGTACCAACCAAAGTGATGACTTCACTTCTATGGTTTTTGTGGTGGGATTGCTCGCCTAATGAGGATTTTGATTGAGTTTTACTTGGAACTTTTCTTTTCTTTCCTTATTGGCATTTCTTTTGCTGTTTTCTTGAGCCTGGATATCCTTTCTTACCCGTGGTAATATGATGTTGATATATTAACATTTAGGCCATTGCAATAGAAGGCCGCTTCTGTTGGGAGTTGGAGCTCTAGCTACAAGTTTACTCACTGCAAGTCCCCTCTTTGCTGAAGGTATAAATTTCCAACTCTCTCCAATAATCTAATGTTGGATTCTAAATTAATATTGTGATTATTATGTGCAGAAGTCCCAAAAAATTATCGAGCATTTGTAGACTCTACAGATGGGTATTCCTATTATTACCCCTCTGATTGGAGGGTGAGAAAATTTCAACTTGCAGAAACATGAGATGCATGTGTAGTAAACAAAAAAAATATACTAAAACAAACAGTTTCTAAATGTTCCCTGTCTAGGAATTTGATTTTAGAGCCCACGATTCGGCATTCAAGGATCGATACCTGCAACTACAGAATGTTAGAGTGAAGTTCATACCAACAGAGAAAAAGGATATCCATGAAGAAGGTCCATTAGATGAGGTAAAAGAATCTTCAACTTAGATCGTATTTGATATTCTGAGAAAAAAAGTCTGAATAGTTTAACTTGACTGAAGCAGGTTGTCAACTTTTTGGTAAAACATCGATATGCTGCACCAAATCAAAAGGCTACCATATATGACATGAAGGAGGTTTGCATTTTTCTCTGCCTCTCATATCAATTTTTCTATATAATATTATCTTGAAATCTGTTTCTGGGACATTTGGTTGATCTTTTATTCTCCTGTTTCAGCGAACGATTGATGGGAGAAATTATTACACCTTTGAGTATAAACTTAGTTCTAGAGCATACTCCCGCACCTCCTTTGCAACCATAGCCATTGCAAACGGTAAGCTCATATTTTATTAGAATTTTAGACCCTTCCATTTTTTTATTGATCAGCTCTAAATCCCATGCTTTTTTAACCATAGGATACTTCTTTACCCGAAAAAAGTAATAAAGAATATCAAATTGAACTATTCAGTTTAGAAATAGAGATATCTAACAGAATCGAAATTAACCAAACTCGTTTTATCCATTTGTATTCTGCAATCTTAACCTAACTCATATCTAACCGATAGTTTTAGTTTTTGAATTGAATACAATCCGATTCGTGTTAAAGTTCCTGAATTAAAACGCACACTCATCTCTTACTGGCGAGGTTCATAGAAGAATATGGAAACTTGCAAGTGTTTTTTTAGTACATCGTAGAGTTTGGTTAGAGAAGAAGTACATATCAATTACCATTAATCTATACTGATATTGGCGGGTAGCTTAACAAGTGTTGAAACAGCCATTTCTCTAATATGCAGGTAGGTACTATACTTTGGTAGTGGGGGCAAATGACAGAAGGTGGAGAAGGTACCGCGACATGCTTAAAGTGGTTGCTGATTCATTCAGGGTGTTGGATATCTGA

mRNA sequence

ATGGCAGTTTCAACCTCTTGCTTGAGTTGGGTTCCCACCACCGCCTCCAATTGGAAGCTGAGGTTGCTTCCTTTCAATGAGCCTTCAACAGCTACTTGTTCATTTTCTTCCTGTAGTACCATCAATTGCTCAACTGAGAGAACTTCCCGTGAGGAAGGCCATTGCAATAGAAGGCCGCTTCTGTTGGGAGTTGGAGCTCTAGCTACAAGTTTACTCACTGCAAGTCCCCTCTTTGCTGAAGGTAGGTACTATACTTTGGTAGTGGGGGCAAATGACAGAAGGTGGAGAAGGTACCGCGACATGCTTAAAGTGGTTGCTGATTCATTCAGGGTGTTGGATATCTGA

Coding sequence (CDS)

ATGGCAGTTTCAACCTCTTGCTTGAGTTGGGTTCCCACCACCGCCTCCAATTGGAAGCTGAGGTTGCTTCCTTTCAATGAGCCTTCAACAGCTACTTGTTCATTTTCTTCCTGTAGTACCATCAATTGCTCAACTGAGAGAACTTCCCGTGAGGAAGGCCATTGCAATAGAAGGCCGCTTCTGTTGGGAGTTGGAGCTCTAGCTACAAGTTTACTCACTGCAAGTCCCCTCTTTGCTGAAGGTAGGTACTATACTTTGGTAGTGGGGGCAAATGACAGAAGGTGGAGAAGGTACCGCGACATGCTTAAAGTGGTTGCTGATTCATTCAGGGTGTTGGATATCTGA

Protein sequence

MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPLLLGVGALATSLLTASPLFAEGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI

Homology

[Close]

BLAST of HG10022247 vs. NCBI nr
Match: XP_038889545.1 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 [Benincasa hispida])

HSP 1 Score: 173.3 bits (438), Expect = 1.2e-39
Identity = 110/235 (46.81%), Postives = 111/235 (47.23%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPL 60
           MAVSTSC SWVPTTASNWKLRLLPFNEPSTAT SFSSCSTINCSTE+TSREEGHCNRRPL
Sbjct: 1   MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATSSFSSCSTINCSTEKTSREEGHCNRRPL 60

Query: 61  LLGVGALATSLLTASPLFAE---------------------------------------- 115
           LLGVGALATSLL ASPLFAE                                        
Sbjct: 61  LLGVGALATSLLAASPLFAEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYL 120

[Close]

BLAST of HG10022247 vs. NCBI nr
Match: XP_038889544.1 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 172.9 bits (437), Expect = 1.5e-39
Identity = 110/236 (46.61%), Postives = 111/236 (47.03%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPL 60
           MAVSTSC SWVPTTASNWKLRLLPFNEPSTAT SFSSCSTINCSTE+TSREEGHCNRRPL
Sbjct: 1   MAVSTSCFSWVPTTASNWKLRLLPFNEPSTATSSFSSCSTINCSTEKTSREEGHCNRRPL 60

Query: 61  LLGVGALATSLLTASPLFAE---------------------------------------- 115
           LLGVGALATSLL ASPLFAE                                        
Sbjct: 61  LLGVGALATSLLAASPLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

[Close]

BLAST of HG10022247 vs. NCBI nr
Match: XP_022953456.1 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 161.0 bits (406), Expect = 6.1e-36
Identity = 103/235 (43.83%), Postives = 107/235 (45.53%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPL 60
           MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+TI CSTERTSR E HCNRRPL
Sbjct: 1   MAVSTSCLSWVPTSASNWKPRLLPFNEPSTATCSYSSCTTIICSTERTSRVESHCNRRPL 60

Query: 61  LLGVGALATSLLTASPLFAE---------------------------------------- 115
           LLGVGALA SL  ASPLFAE                                        
Sbjct: 61  LLGVGALAASLFAASPLFAEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYL 120

[Close]

BLAST of HG10022247 vs. NCBI nr
Match: XP_022953447.1 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucurbita moschata] >KAG6602355.1 Photosynthetic NDH subunit of lumenal location 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033035.1 Photosynthetic NDH subunit of lumenal location 1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 160.6 bits (405), Expect = 7.9e-36
Identity = 103/236 (43.64%), Postives = 107/236 (45.34%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPL 60
           MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+TI CSTERTSR E HCNRRPL
Sbjct: 1   MAVSTSCLSWVPTSASNWKPRLLPFNEPSTATCSYSSCTTIICSTERTSRVESHCNRRPL 60

Query: 61  LLGVGALATSLLTASPLFAE---------------------------------------- 115
           LLGVGALA SL  ASPLFAE                                        
Sbjct: 61  LLGVGALAASLFAASPLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

[Close]

BLAST of HG10022247 vs. NCBI nr
Match: XP_023534754.1 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 158.3 bits (399), Expect = 3.9e-35
Identity = 101/235 (42.98%), Postives = 107/235 (45.53%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPL 60
           MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+T+ CSTERTSR E  CNRRPL
Sbjct: 1   MAVSTSCLSWVPTSASNWKPRLLPFNEPSTATCSYSSCTTVICSTERTSRVESQCNRRPL 60

Query: 61  LLGVGALATSLLTASPLFAE---------------------------------------- 115
           LLGVGALATSL  A+PLFAE                                        
Sbjct: 61  LLGVGALATSLFAATPLFAEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYL 120

[Close]

BLAST of HG10022247 vs. ExPASy Swiss-Prot
Match: O80634 (Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PNSL1 PE=1 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 4.0e-06
Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 0


Query: 74  ASPLFAEGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 115
           A+      RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Sbjct: 198 ATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI 238

[Close]

BLAST of HG10022247 vs. ExPASy TrEMBL
Match: A0A6J1GN22 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111455996 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.9e-36
Identity = 103/235 (43.83%), Postives = 107/235 (45.53%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPL 60
           MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+TI CSTERTSR E HCNRRPL
Sbjct: 1   MAVSTSCLSWVPTSASNWKPRLLPFNEPSTATCSYSSCTTIICSTERTSRVESHCNRRPL 60

Query: 61  LLGVGALATSLLTASPLFAE---------------------------------------- 115
           LLGVGALA SL  ASPLFAE                                        
Sbjct: 61  LLGVGALAASLFAASPLFAEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYL 120

[Close]

BLAST of HG10022247 vs. ExPASy TrEMBL
Match: A0A6J1GN93 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111455996 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 3.8e-36
Identity = 103/236 (43.64%), Postives = 107/236 (45.34%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPL 60
           MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+TI CSTERTSR E HCNRRPL
Sbjct: 1   MAVSTSCLSWVPTSASNWKPRLLPFNEPSTATCSYSSCTTIICSTERTSRVESHCNRRPL 60

Query: 61  LLGVGALATSLLTASPLFAE---------------------------------------- 115
           LLGVGALA SL  ASPLFAE                                        
Sbjct: 61  LLGVGALAASLFAASPLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

[Close]

BLAST of HG10022247 vs. ExPASy TrEMBL
Match: A0A6J1JMZ7 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111487305 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 3.2e-35
Identity = 101/235 (42.98%), Postives = 106/235 (45.11%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPL 60
           MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+T+ CSTERTSR E  CNRRPL
Sbjct: 1   MAVSTSCLSWVPTSASNWKPRLLPFNEPSTATCSYSSCTTVICSTERTSRVESQCNRRPL 60

Query: 61  LLGVGALATSLLTASPLFAE---------------------------------------- 115
           LLGVGALATSL  A PLFAE                                        
Sbjct: 61  LLGVGALATSLFAARPLFAEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRYL 120

[Close]

BLAST of HG10022247 vs. ExPASy TrEMBL
Match: A0A6J1JS28 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487305 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 4.2e-35
Identity = 101/236 (42.80%), Postives = 106/236 (44.92%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPL 60
           MAVSTSCLSWVPT+ASNWK RLLPFNEPSTATCS+SSC+T+ CSTERTSR E  CNRRPL
Sbjct: 1   MAVSTSCLSWVPTSASNWKPRLLPFNEPSTATCSYSSCTTVICSTERTSRVESQCNRRPL 60

Query: 61  LLGVGALATSLLTASPLFAE---------------------------------------- 115
           LLGVGALATSL  A PLFAE                                        
Sbjct: 61  LLGVGALATSLFAARPLFAEEVPKNYRAFVDSTDGYSYYYPSDWREFDFRAHDSAFKDRY 120

[Close]

BLAST of HG10022247 vs. ExPASy TrEMBL
Match: A0A1S3CJF3 (photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501649 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 9.4e-35
Identity = 104/235 (44.26%), Postives = 108/235 (45.96%), Query Frame = 0


Query: 1   MAVSTSCLSWVPTTASNWKLRLLPFNEPSTATCSFSSCSTINCSTERTSREEGHCNRRPL 60
           MAVSTSCLSWVPTTASNWKL+LLPFNEP+TAT SFSS STINCS ERTSR+EG  NRRPL
Sbjct: 1   MAVSTSCLSWVPTTASNWKLKLLPFNEPTTATSSFSSSSTINCSIERTSRDEGIYNRRPL 60

Query: 61  LLGVGALATSLLTASPLFAE---------------------------------------- 115
           LLGVGALATSLL ASPLFA+                                        
Sbjct: 61  LLGVGALATSLLGASPLFAQVPKNYRAFVDYTDGYSYYYPSDWREFDFRAHDSAFKDRYL 120

[Close]

BLAST of HG10022247 vs. TAIR 10
Match: AT2G39470.1 (PsbP-like protein 2 )

HSP 1 Score: 52.4 bits (124), Expect = 2.8e-07
Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 0


Query: 74  ASPLFAEGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 115
           A+      RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Sbjct: 198 ATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI 238

[Close]

BLAST of HG10022247 vs. TAIR 10
Match: AT2G39470.2 (PsbP-like protein 2 )

HSP 1 Score: 52.4 bits (124), Expect = 2.8e-07
Identity = 22/41 (53.66%), Postives = 30/41 (73.17%), Query Frame = 0


Query: 74  ASPLFAEGRYYTLVVGANDRRWRRYRDMLKVVADSFRVLDI 115
           A+      RYYTL+VGAN+RRWR+ +  L+VVADS ++L I
Sbjct: 190 ATVAVGNNRYYTLIVGANERRWRKVKKQLQVVADSLKILQI 230

[Close]

BLAST of HG10022247 vs. TAIR 10
Match: AT3G55330.1 (PsbP-like protein 1 )

HSP 1 Score: 43.5 bits (101), Expect = 1.3e-04
Identity = 16/31 (51.61%), Postives = 22/31 (70.97%), Query Frame = 0


Query: 81  GRYYTLVVGANDRRWRRYRDMLKVVADSFRV 112
           G +YTL  GAN+RRW + +D L  V DSF++
Sbjct: 198 GNFYTLTTGANERRWEKMKDRLHTVVDSFKI 228

The following BLAST results are available for this feature:

BLAST of HG10022247 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889545.1	1.2e-39	46.81	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 [Beni...	[more]
XP_038889544.1	1.5e-39	46.61	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Beni...	[more]
XP_022953456.1	6.1e-36	43.83	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 [Cucu...	[more]
XP_022953447.1	7.9e-36	43.64	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 [Cucu...	[more]
XP_023534754.1	3.9e-35	42.98	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 [Cucu...	[more]

BLAST of HG10022247 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80634	4.0e-06	53.66	Photosynthetic NDH subunit of lumenal location 1, chloroplastic OS=Arabidopsis t...	[more]

BLAST of HG10022247 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GN22	2.9e-36	43.83	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 OS=Cu...	[more]
A0A6J1GN93	3.8e-36	43.64	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 OS=Cu...	[more]
A0A6J1JMZ7	3.2e-35	42.98	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 OS=Cu...	[more]
A0A6J1JS28	4.2e-35	42.80	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X1 OS=Cu...	[more]
A0A1S3CJF3	9.4e-35	44.26	photosynthetic NDH subunit of lumenal location 1, chloroplastic isoform X2 OS=Cu...	[more]

BLAST of HG10022247 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39470.1	2.8e-07	53.66	PsbP-like protein 2	[more]
AT2G39470.2	2.8e-07	53.66	PsbP-like protein 2	[more]
AT3G55330.1	1.3e-04	51.61	PsbP-like protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002683	PsbP, C-terminal	PFAM	PF01789	PsbP	coord: 79..111 e-value: 2.6E-6 score: 27.6
None	No IPR available	GENE3D	3.40.1000.10	Mog1/PsbP, alpha/beta/alpha sandwich	coord: 41..112 e-value: 3.2E-6 score: 29.3
None	No IPR available	PANTHER	PTHR31407	FAMILY NOT NAMED	coord: 79..114 coord: 1..80
None	No IPR available	PANTHER	PTHR31407:SF10	PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 1, CHLOROPLASTIC	coord: 79..114 coord: 1..80
IPR016123	Mog1/PsbP, alpha/beta/alpha sandwich	SUPERFAMILY	55724	Mog1p/PsbP-like	coord: 78..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10022247.1	HG10022247.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0009523	photosystem II
molecular_function	GO:0005509	calcium ion binding