HG10022239 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10022239
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionActin-depolymerizing factor
LocationChr05: 22205038 .. 22206765 (-)
RNA-Seq ExpressionHG10022239
SyntenyHG10022239
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCTAGGAGGCCTGTTTGATGTAGACTATAGAGTTGAGCATCAGAATTCAAAGGTGTGTTAAAAGAGGTGGCTTTAGAATTTCAGGAGGGAGGAGCTGGTTAAAGTTGGTCTCCTTCACATTAAAGGTTAGGGTCACTGTTGGGTATAATGACAGCAAGAAATGAGTTTTGAGAAAAGGGATGGTGCCTTTTTTCTTCTTCTATGTTAGAAGTTTCGCCACAGGTTCTGTTCATACTGTACTGAAGTCTTTTTTAGGACTTCCTTAAAGAAGCCAGGATCTGAACACTGTTGTAGGTGCATTGTCCGGGCCTCTGTGTGTTCAGACAACTCTTATGTTTGTTTAGTAGCAGAGCATGGATATGGCAACCATATGATGGCTTCTTGATACGGGAAACTCAAGTAGAAGTTAATTGTGATCTTAATAAAGAAATAGCTCAAATATTTTACCCCTGACTATACATGTCGGTAGTGGATTCCCCAAGCACTTAAGTGATTCTAATAACTTGAATGGGCTAGTTTTGATAGGTTCATGTTGAGTCTTATGCCATAGTCCCCACAAAATACCAAAATGGAAAGGTTTCTCAAAGAATAAATCCTTCGATTATAAAATTGGTGTTGCATGAAGAGTAGGGGAGTGGTTTGAAGTCTTGGGCTCCAAAGACCTTTACCTTCCATTTCAATATTCTCATGGGACCACTTTAGACCTTACAAGTCTAAAACTTTAGGCCACATTTTTTGTTTTAAAAAAAAAAAAAAAAAACTTTTTGGATATGCGTAACATTGAATAAGAGGCTTATTCAATTATGAAAAACATGTTCTATGAAGTTTACTTTGGTAGGAAGGAAAGATTTATTATATAAAGATACATACAACCCCGTTTTGTTAACTTATTCAATGACTGAAAAAGATATATTAGACTTCTGAAAATTCCACCAACGAATGACAAGGAAGCTAGATATATTTCTAAGGGGGCTAGGTTGGATGGGTATTTCTCTGAAGGAAACTGATCTGTTAATCAAATTTGAGCTGCATGGTCATACTTTCTAGCAAGGAGGTCCGACTCTCTAGAGTAATGGGAAATTGGTCCCACTTTTCCTCCATCATCTTTATACAGTCTGCACTGGACTTCTACTATGGTTGGGGTTCATGGATACTATGGAGATTTATGTTCTCTGAGTTCATAACTTGTAAATCACTCTATCACAGGCAAATGCAGCATCAGGGATGGCTGTGCACGATGATTGCAAGCTCAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTTTATAGTTTTCAAGATTGAGGAAAAACAGAAGCAGGTTGTGGTGGAAAAGCTTGGTGAGCCATCTCAAAGTTATGAGGATTTCACTGCCAGCCTCCCTGCTGATGAATGCCGATACGCAGTTTATGATTTCGATTTTGTGACTGAAGAGAATTGCCAGAAGAGCAGGATTATATTCATTGCATGGTAAACGTACTACCTAGCATTCACTATCATTTTTTAAACAGTTCGTCTCTCATTTCATGAACATGCATTCTGACTCATGATTTACCAATTTTGTATTAAGGTCTCCTGATACATCAAAGGTGAGAAGCAAGATGATTTACGCAAGTTCCAAGGATAGGTTCAAGAGGGAATTGGATGGCATTCAAGTGGAGTTACAAGCAACTGATCCTACTGAGATGGGGCTTGATGTTATCAGAAGTCGATCTGGCTGA

mRNA sequence

ATGGGGCTAGGAGGCCTGTTTGATGTAGACTATAGAGTTGAGCATCAGAATTCAAAGGCAAATGCAGCATCAGGGATGGCTGTGCACGATGATTGCAAGCTCAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTTTATAGTTTTCAAGATTGAGGAAAAACAGAAGCAGGTTGTGGTGGAAAAGCTTGGTGAGCCATCTCAAAGTTATGAGGATTTCACTGCCAGCCTCCCTGCTGATGAATGCCGATACGCAGTTTATGATTTCGATTTTGTGACTGAAGAGAATTGCCAGAAGAGCAGGATTATATTCATTGCATGGTCTCCTGATACATCAAAGGTGAGAAGCAAGATGATTTACGCAAGTTCCAAGGATAGGTTCAAGAGGGAATTGGATGGCATTCAAGTGGAGTTACAAGCAACTGATCCTACTGAGATGGGGCTTGATGTTATCAGAAGTCGATCTGGCTGA

Coding sequence (CDS)

ATGGGGCTAGGAGGCCTGTTTGATGTAGACTATAGAGTTGAGCATCAGAATTCAAAGGCAAATGCAGCATCAGGGATGGCTGTGCACGATGATTGCAAGCTCAGGTTTCTGGATTTGAAGGCAAAAAGAACCTACCGTTTTATAGTTTTCAAGATTGAGGAAAAACAGAAGCAGGTTGTGGTGGAAAAGCTTGGTGAGCCATCTCAAAGTTATGAGGATTTCACTGCCAGCCTCCCTGCTGATGAATGCCGATACGCAGTTTATGATTTCGATTTTGTGACTGAAGAGAATTGCCAGAAGAGCAGGATTATATTCATTGCATGGTCTCCTGATACATCAAAGGTGAGAAGCAAGATGATTTACGCAAGTTCCAAGGATAGGTTCAAGAGGGAATTGGATGGCATTCAAGTGGAGTTACAAGCAACTGATCCTACTGAGATGGGGCTTGATGTTATCAGAAGTCGATCTGGCTGA

Protein sequence

MGLGGLFDVDYRVEHQNSKANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLPADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPTEMGLDVIRSRSG
Homology
[Close]
BLAST of HG10022239 vs. NCBI nr
Match: XP_008463478.1 (PREDICTED: actin-depolymerizing factor 2 isoform X1 [Cucumis melo] >XP_008463479.1 PREDICTED: actin-depolymerizing factor 2 isoform X2 [Cucumis melo])

HSP 1 Score: 274.6 bits (701), Expect = 5.2e-70
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 20  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLP 79
           ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPS+SYEDFTASLP
Sbjct: 2   ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSESYEDFTASLP 61

Query: 80  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 139
           ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 140 QATDPTEMGLDVIRSRSG 158
           QATDPTEMGLDVIRSRSG
Sbjct: 122 QATDPTEMGLDVIRSRSG 139

[Close]
BLAST of HG10022239 vs. NCBI nr
Match: XP_038891099.1 (actin-depolymerizing factor 2 [Benincasa hispida])

HSP 1 Score: 274.2 bits (700), Expect = 6.8e-70
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 20  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLP 79
           ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLP
Sbjct: 2   ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLP 61

Query: 80  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 139
           ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 140 QATDPTEMGLDVIRSRSG 158
           QATDP+EMGLDVIRSRSG
Sbjct: 122 QATDPSEMGLDVIRSRSG 139

[Close]
BLAST of HG10022239 vs. NCBI nr
Match: XP_004142738.1 (actin-depolymerizing factor 2 isoform X1 [Cucumis sativus] >XP_011655353.1 actin-depolymerizing factor 2 isoform X2 [Cucumis sativus] >KGN51280.1 hypothetical protein Csa_009315 [Cucumis sativus])

HSP 1 Score: 273.1 bits (697), Expect = 1.5e-69
Identity = 136/138 (98.55%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 20  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLP 79
           ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLG+PS+SYEDFTASLP
Sbjct: 2   ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASLP 61

Query: 80  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 139
           ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 140 QATDPTEMGLDVIRSRSG 158
           QATDPTEMGLDVIRSRSG
Sbjct: 122 QATDPTEMGLDVIRSRSG 139

[Close]
BLAST of HG10022239 vs. NCBI nr
Match: XP_022922159.1 (actin-depolymerizing factor 2 [Cucurbita moschata] >XP_022990483.1 actin-depolymerizing factor 2 [Cucurbita maxima] >KAG6602360.1 Actin-depolymerizing factor 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033039.1 Actin-depolymerizing factor 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 272.7 bits (696), Expect = 2.0e-69
Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0 

Query: 20  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLP 79
           ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDF ASLP
Sbjct: 2   ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASLP 61

Query: 80  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 139
           ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 140 QATDPTEMGLDVIRSRSG 158
           QATDPTEMGLDVIRSRSG
Sbjct: 122 QATDPTEMGLDVIRSRSG 139

[Close]
BLAST of HG10022239 vs. NCBI nr
Match: XP_023534804.1 (actin-depolymerizing factor 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.2 bits (692), Expect = 5.7e-69
Identity = 135/138 (97.83%), Postives = 137/138 (99.28%), Query Frame = 0 

Query: 20  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLP 79
           ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLG+PSQSYEDF ASLP
Sbjct: 2   ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSQSYEDFAASLP 61

Query: 80  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 139
           ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 140 QATDPTEMGLDVIRSRSG 158
           QATDPTEMGLDVIRSRSG
Sbjct: 122 QATDPTEMGLDVIRSRSG 139

[Close]
BLAST of HG10022239 vs. ExPASy Swiss-Prot
Match: Q9FVI1 (Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 2.8e-66
Identity = 122/138 (88.41%), Postives = 134/138 (97.10%), Query Frame = 0 

Query: 20  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLP 79
           ANAASGMAVHDDCKL+FL+LKAKRTYRFI++KIEEKQK+VVVEKLGEP++SYEDFTA LP
Sbjct: 2   ANAASGMAVHDDCKLKFLELKAKRTYRFIIYKIEEKQKEVVVEKLGEPTESYEDFTAGLP 61

Query: 80  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 139
           ADECRYAVYDFDF+T+EN QKSRI FIAWSPDT++VRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAVYDFDFMTKENHQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 140 QATDPTEMGLDVIRSRSG 158
           QATDPTEMGLDV RSR+G
Sbjct: 122 QATDPTEMGLDVFRSRAG 139

[Close]
BLAST of HG10022239 vs. ExPASy Swiss-Prot
Match: Q9FVI2 (Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 1.5e-64
Identity = 120/137 (87.59%), Postives = 131/137 (95.62%), Query Frame = 0 

Query: 20  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLP 79
           ANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQVVVEK+GEP++SYEDF ASLP
Sbjct: 2   ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKIGEPTESYEDFAASLP 61

Query: 80  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 139
            +ECRYAVYDFDFVT ENCQKSRI FIAW PDT++VRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ENECRYAVYDFDFVTAENCQKSRIFFIAWCPDTARVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 140 QATDPTEMGLDVIRSRS 157
           QA DPTEMGLDVI+SR+
Sbjct: 122 QACDPTEMGLDVIQSRA 138

[Close]
BLAST of HG10022239 vs. ExPASy Swiss-Prot
Match: Q9ZSK3 (Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2)

HSP 1 Score: 242.7 bits (618), Expect = 2.9e-63
Identity = 117/136 (86.03%), Postives = 128/136 (94.12%), Query Frame = 0 

Query: 20  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLP 79
           ANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQV+VEK+GEP  +YEDF ASLP
Sbjct: 2   ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLP 61

Query: 80  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 139
           ADECRYA+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 140 QATDPTEMGLDVIRSR 156
           QATDPTEM LDV++SR
Sbjct: 122 QATDPTEMDLDVLKSR 137

[Close]
BLAST of HG10022239 vs. ExPASy Swiss-Prot
Match: Q39250 (Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 6.4e-63
Identity = 117/137 (85.40%), Postives = 128/137 (93.43%), Query Frame = 0 

Query: 20  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLP 79
           ANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQVVVEK+G+P Q+YE+F A LP
Sbjct: 2   ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 61

Query: 80  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 139
           ADECRYA+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 140 QATDPTEMGLDVIRSRS 157
           QATDPTEM LDV RSR+
Sbjct: 122 QATDPTEMDLDVFRSRA 138

[Close]
BLAST of HG10022239 vs. ExPASy Swiss-Prot
Match: Q0DLA3 (Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 PE=3 SV=2)

HSP 1 Score: 236.1 bits (601), Expect = 2.7e-61
Identity = 112/137 (81.75%), Postives = 130/137 (94.89%), Query Frame = 0 

Query: 20  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLP 79
           ANAASGMAV D+CKL+FL+LKAKRTYRFI++KI+EK+K VVVEK+GEP  +Y+DF ASLP
Sbjct: 2   ANAASGMAVDDECKLKFLELKAKRTYRFIIYKIDEKKKMVVVEKVGEPVLNYDDFAASLP 61

Query: 80  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 139
           A+ECRYA++D+DFVTEENCQKS+I FIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ANECRYAIFDYDFVTEENCQKSKIFFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 140 QATDPTEMGLDVIRSRS 157
           QATDPTE+GLDVIR R+
Sbjct: 122 QATDPTEVGLDVIRGRA 138

[Close]
BLAST of HG10022239 vs. ExPASy TrEMBL
Match: A0A1S3CJB1 (actin-depolymerizing factor 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501640 PE=3 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 2.5e-70
Identity = 137/138 (99.28%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 20  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLP 79
           ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPS+SYEDFTASLP
Sbjct: 2   ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSESYEDFTASLP 61

Query: 80  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 139
           ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 140 QATDPTEMGLDVIRSRSG 158
           QATDPTEMGLDVIRSRSG
Sbjct: 122 QATDPTEMGLDVIRSRSG 139

[Close]
BLAST of HG10022239 vs. ExPASy TrEMBL
Match: A0A0A0KNQ1 (ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G512870 PE=3 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 7.3e-70
Identity = 136/138 (98.55%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 20  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLP 79
           ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLG+PS+SYEDFTASLP
Sbjct: 2   ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGKPSESYEDFTASLP 61

Query: 80  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 139
           ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 140 QATDPTEMGLDVIRSRSG 158
           QATDPTEMGLDVIRSRSG
Sbjct: 122 QATDPTEMGLDVIRSRSG 139

[Close]
BLAST of HG10022239 vs. ExPASy TrEMBL
Match: A0A6J1JTE7 (actin-depolymerizing factor 2 OS=Cucurbita maxima OX=3661 GN=LOC111487332 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 9.5e-70
Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0 

Query: 20  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLP 79
           ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDF ASLP
Sbjct: 2   ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASLP 61

Query: 80  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 139
           ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 140 QATDPTEMGLDVIRSRSG 158
           QATDPTEMGLDVIRSRSG
Sbjct: 122 QATDPTEMGLDVIRSRSG 139

[Close]
BLAST of HG10022239 vs. ExPASy TrEMBL
Match: A0A6J1E2L4 (actin-depolymerizing factor 2 OS=Cucurbita moschata OX=3662 GN=LOC111430219 PE=3 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 9.5e-70
Identity = 136/138 (98.55%), Postives = 137/138 (99.28%), Query Frame = 0 

Query: 20  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLP 79
           ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDF ASLP
Sbjct: 2   ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFAASLP 61

Query: 80  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 139
           ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTS+VRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSRVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 140 QATDPTEMGLDVIRSRSG 158
           QATDPTEMGLDVIRSRSG
Sbjct: 122 QATDPTEMGLDVIRSRSG 139

[Close]
BLAST of HG10022239 vs. ExPASy TrEMBL
Match: A0A6J1K1F6 (actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111489270 PE=3 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 8.1e-69
Identity = 135/138 (97.83%), Postives = 136/138 (98.55%), Query Frame = 0 

Query: 20  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLP 79
           ANAASGMAVHDDCKLRFLDLKAKRT+RFIVFKIEEK KQVVVEKLGEPSQSYEDF ASLP
Sbjct: 2   ANAASGMAVHDDCKLRFLDLKAKRTFRFIVFKIEEKLKQVVVEKLGEPSQSYEDFAASLP 61

Query: 80  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 139
           ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 140 QATDPTEMGLDVIRSRSG 158
           QATDPTEMGLDVIRSRSG
Sbjct: 122 QATDPTEMGLDVIRSRSG 139

[Close]
BLAST of HG10022239 vs. TAIR 10
Match: AT5G59890.1 (actin depolymerizing factor 4 )

HSP 1 Score: 242.7 bits (618), Expect = 2.0e-64
Identity = 117/136 (86.03%), Postives = 128/136 (94.12%), Query Frame = 0 

Query: 20  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLP 79
           ANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQV+VEK+GEP  +YEDF ASLP
Sbjct: 2   ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLP 61

Query: 80  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 139
           ADECRYA+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 140 QATDPTEMGLDVIRSR 156
           QATDPTEM LDV++SR
Sbjct: 122 QATDPTEMDLDVLKSR 137

[Close]
BLAST of HG10022239 vs. TAIR 10
Match: AT3G46010.1 (actin depolymerizing factor 1 )

HSP 1 Score: 241.5 bits (615), Expect = 4.5e-64
Identity = 117/137 (85.40%), Postives = 128/137 (93.43%), Query Frame = 0 

Query: 20  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLP 79
           ANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQVVVEK+G+P Q+YE+F A LP
Sbjct: 2   ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 61

Query: 80  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 139
           ADECRYA+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 121

Query: 140 QATDPTEMGLDVIRSRS 157
           QATDPTEM LDV RSR+
Sbjct: 122 QATDPTEMDLDVFRSRA 138

[Close]
BLAST of HG10022239 vs. TAIR 10
Match: AT3G46010.2 (actin depolymerizing factor 1 )

HSP 1 Score: 241.5 bits (615), Expect = 4.5e-64
Identity = 117/137 (85.40%), Postives = 128/137 (93.43%), Query Frame = 0 

Query: 20  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLP 79
           ANAASGMAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQVVVEK+G+P Q+YE+F A LP
Sbjct: 13  ANAASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP 72

Query: 80  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 139
           ADECRYA+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVEL
Sbjct: 73  ADECRYAIYDFDFVTAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDGIQVEL 132

Query: 140 QATDPTEMGLDVIRSRS 157
           QATDPTEM LDV RSR+
Sbjct: 133 QATDPTEMDLDVFRSRA 149

[Close]
BLAST of HG10022239 vs. TAIR 10
Match: AT3G46000.1 (actin depolymerizing factor 2 )

HSP 1 Score: 235.0 bits (598), Expect = 4.2e-62
Identity = 113/137 (82.48%), Postives = 127/137 (92.70%), Query Frame = 0 

Query: 20  ANAASGMAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLP 79
           ANAASGMAVHDDCKL+F++LKAKRT+R IV+KIE+  KQV+VEKLGEP QSY+DF ASLP
Sbjct: 2   ANAASGMAVHDDCKLKFMELKAKRTFRTIVYKIED--KQVIVEKLGEPEQSYDDFAASLP 61

Query: 80  ADECRYAVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVEL 139
           AD+CRY +YDFDFVT ENCQKS+I FIAWSPDT+KVR KMIYASSKDRFKRELDGIQVEL
Sbjct: 62  ADDCRYCIYDFDFVTAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGIQVEL 121

Query: 140 QATDPTEMGLDVIRSRS 157
           QATDPTEMGLDV +SR+
Sbjct: 122 QATDPTEMGLDVFKSRT 136

[Close]
BLAST of HG10022239 vs. TAIR 10
Match: AT5G59890.2 (actin depolymerizing factor 4 )

HSP 1 Score: 231.5 bits (589), Expect = 4.7e-61
Identity = 111/130 (85.38%), Postives = 122/130 (93.85%), Query Frame = 0 

Query: 26  MAVHDDCKLRFLDLKAKRTYRFIVFKIEEKQKQVVVEKLGEPSQSYEDFTASLPADECRY 85
           MAVHDDCKLRFL+LKAKRT+RFIV+KIEEKQKQV+VEK+GEP  +YEDF ASLPADECRY
Sbjct: 1   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLPADECRY 60

Query: 86  AVYDFDFVTEENCQKSRIIFIAWSPDTSKVRSKMIYASSKDRFKRELDGIQVELQATDPT 145
           A+YDFDFVT ENCQKS+I FIAW PD +KVRSKMIYASSKDRFKRELDGIQVELQATDPT
Sbjct: 61  AIYDFDFVTAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQVELQATDPT 120

Query: 146 EMGLDVIRSR 156
           EM LDV++SR
Sbjct: 121 EMDLDVLKSR 130

The following BLAST results are available for this feature:
BLAST of HG10022239 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008463478.15.2e-7099.28PREDICTED: actin-depolymerizing factor 2 isoform X1 [Cucumis melo] >XP_008463479... [more]
XP_038891099.16.8e-7099.28actin-depolymerizing factor 2 [Benincasa hispida][more]
XP_004142738.11.5e-6998.55actin-depolymerizing factor 2 isoform X1 [Cucumis sativus] >XP_011655353.1 actin... [more]
XP_022922159.12.0e-6998.55actin-depolymerizing factor 2 [Cucurbita moschata] >XP_022990483.1 actin-depolym... [more]
XP_023534804.15.7e-6997.83actin-depolymerizing factor 2 [Cucurbita pepo subsp. pepo][more]
BLAST of HG10022239 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FVI12.8e-6688.41Actin-depolymerizing factor 2 OS=Petunia hybrida OX=4102 GN=ADF2 PE=2 SV=1[more]
Q9FVI21.5e-6487.59Actin-depolymerizing factor 1 OS=Petunia hybrida OX=4102 GN=ADF1 PE=2 SV=1[more]
Q9ZSK32.9e-6386.03Actin-depolymerizing factor 4 OS=Arabidopsis thaliana OX=3702 GN=ADF4 PE=1 SV=2[more]
Q392506.4e-6385.40Actin-depolymerizing factor 1 OS=Arabidopsis thaliana OX=3702 GN=ADF1 PE=1 SV=1[more]
Q0DLA32.7e-6181.75Actin-depolymerizing factor 7 OS=Oryza sativa subsp. japonica OX=39947 GN=ADF7 P... [more]
BLAST of HG10022239 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CJB12.5e-7099.28actin-depolymerizing factor 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501640... [more]
A0A0A0KNQ17.3e-7098.55ADF-H domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G512870 PE=3 ... [more]
A0A6J1JTE79.5e-7098.55actin-depolymerizing factor 2 OS=Cucurbita maxima OX=3661 GN=LOC111487332 PE=3 S... [more]
A0A6J1E2L49.5e-7098.55actin-depolymerizing factor 2 OS=Cucurbita moschata OX=3662 GN=LOC111430219 PE=3... [more]
A0A6J1K1F68.1e-6997.83actin-depolymerizing factor 2-like OS=Cucurbita maxima OX=3661 GN=LOC111489270 P... [more]
BLAST of HG10022239 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G59890.12.0e-6486.03actin depolymerizing factor 4 [more]
AT3G46010.14.5e-6485.40actin depolymerizing factor 1 [more]
AT3G46010.24.5e-6485.40actin depolymerizing factor 1 [more]
AT3G46000.14.2e-6282.48actin depolymerizing factor 2 [more]
AT5G59890.24.7e-6185.38actin depolymerizing factor 4 [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002108Actin-depolymerising factor homology domainSMARTSM00102adf_2coord: 30..157
e-value: 1.3E-58
score: 210.7
IPR002108Actin-depolymerising factor homology domainPFAMPF00241Cofilin_ADFcoord: 32..154
e-value: 1.8E-37
score: 127.9
IPR002108Actin-depolymerising factor homology domainPROSITEPS51263ADF_Hcoord: 23..157
score: 38.876068
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10Severincoord: 14..157
e-value: 2.0E-53
score: 182.5
IPR017904ADF/CofilinPANTHERPTHR11913COFILIN-RELATEDcoord: 15..156
IPR017904ADF/CofilinCDDcd11286ADF_cofilin_likecoord: 24..155
e-value: 7.5214E-67
score: 197.779
NoneNo IPR availablePANTHERPTHR11913:SF74ACTIN-DEPOLYMERIZING FACTOR 2-LIKEcoord: 15..156
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 16..155

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10022239.1HG10022239.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030042 actin filament depolymerization
cellular_component GO:0015629 actin cytoskeleton
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0051015 actin filament binding
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0003779 actin binding