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HG10022225 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTTGCTACTATTATCATCGGGATCATATTCAATCTTTTGCAAATCGCGTTCACACTCTTTAACATCGTTAAAAATGGCAACAGTACTATATTATTCGATTTCTTTGGCGACAAGGTACGCTAGATATGTATATATATATAATTTGATTTTCTGCCGTGCAATTGTTATATATAATAAGGTAGAAAATTAATAATTAAATAAAAATAAATTGGTTTTTATTTGGTGCAGTTTTTGTCATACCTTCTAGCAACAGGCACAGCAGCTGGACTTGGACTGGCAGTGGATTTGAAAAAAATAGACCCAGATGATTTATTTGGTTCATTCTTTGATAAGGCATATGCAGCATCGACTCTTCTTTTGTTTGCATTCTTTTGTGCTGCAGCTGTCTCTATTCTCTCTTCCTTTGCACTCTCCATCAGATCTTAA ATGCTTGCTACTATTATCATCGGGATCATATTCAATCTTTTGCAAATCGCGTTCACACTCTTTAACATCGTTAAAAATGGCAACAGTACTATATTATTCGATTTCTTTGGCGACAAGTTTTTGTCATACCTTCTAGCAACAGGCACAGCAGCTGGACTTGGACTGGCAGTGGATTTGAAAAAAATAGACCCAGATGATTTATTTGGTTCATTCTTTGATAAGGCATATGCAGCATCGACTCTTCTTTTGTTTGCATTCTTTTGTGCTGCAGCTGTCTCTATTCTCTCTTCCTTTGCACTCTCCATCAGATCTTAA ATGCTTGCTACTATTATCATCGGGATCATATTCAATCTTTTGCAAATCGCGTTCACACTCTTTAACATCGTTAAAAATGGCAACAGTACTATATTATTCGATTTCTTTGGCGACAAGTTTTTGTCATACCTTCTAGCAACAGGCACAGCAGCTGGACTTGGACTGGCAGTGGATTTGAAAAAAATAGACCCAGATGATTTATTTGGTTCATTCTTTGATAAGGCATATGCAGCATCGACTCTTCTTTTGTTTGCATTCTTTTGTGCTGCAGCTGTCTCTATTCTCTCTTCCTTTGCACTCTCCATCAGATCTTAA MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFALSIRS Homology
BLAST of HG10022225 vs. NCBI nr
Match: XP_038877616.1 (CASP-like protein 4D1 [Benincasa hispida]) HSP 1 Score: 177.9 bits (450), Expect = 4.4e-41 Identity = 96/104 (92.31%), Postives = 100/104 (96.15%), Query Frame = 0
BLAST of HG10022225 vs. NCBI nr
Match: XP_004142832.1 (CASP-like protein 4D1 [Cucumis sativus] >KGN51296.1 hypothetical protein Csa_007994 [Cucumis sativus]) HSP 1 Score: 167.5 bits (423), Expect = 5.9e-38 Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 0
BLAST of HG10022225 vs. NCBI nr
Match: XP_008458890.1 (PREDICTED: CASP-like protein 4D1 [Cucumis melo]) HSP 1 Score: 164.5 bits (415), Expect = 5.0e-37 Identity = 89/104 (85.58%), Postives = 96/104 (92.31%), Query Frame = 0
BLAST of HG10022225 vs. NCBI nr
Match: XP_022992767.1 (CASP-like protein 4D1 [Cucurbita maxima]) HSP 1 Score: 159.8 bits (403), Expect = 1.2e-35 Identity = 86/103 (83.50%), Postives = 94/103 (91.26%), Query Frame = 0
BLAST of HG10022225 vs. NCBI nr
Match: XP_023549516.1 (CASP-like protein 4D1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 159.1 bits (401), Expect = 2.1e-35 Identity = 85/103 (82.52%), Postives = 94/103 (91.26%), Query Frame = 0
BLAST of HG10022225 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 6.6e-16 Identity = 49/106 (46.23%), Postives = 70/106 (66.04%), Query Frame = 0
BLAST of HG10022225 vs. ExPASy Swiss-Prot
Match: C6T1Z6 (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 3.3e-15 Identity = 51/105 (48.57%), Postives = 71/105 (67.62%), Query Frame = 0
BLAST of HG10022225 vs. ExPASy Swiss-Prot
Match: A1XGB4 (CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.6e-14 Identity = 47/107 (43.93%), Postives = 68/107 (63.55%), Query Frame = 0
BLAST of HG10022225 vs. ExPASy Swiss-Prot
Match: Q56X75 (CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 2.1e-14 Identity = 50/114 (43.86%), Postives = 74/114 (64.91%), Query Frame = 0
BLAST of HG10022225 vs. ExPASy Swiss-Prot
Match: Q8GWD5 (CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.1e-13 Identity = 50/112 (44.64%), Postives = 70/112 (62.50%), Query Frame = 0
BLAST of HG10022225 vs. ExPASy TrEMBL
Match: A0A0A0KU83 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515010 PE=3 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 2.9e-38 Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 0
BLAST of HG10022225 vs. ExPASy TrEMBL
Match: A0A1S3C9H1 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498162 PE=3 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 2.4e-37 Identity = 89/104 (85.58%), Postives = 96/104 (92.31%), Query Frame = 0
BLAST of HG10022225 vs. ExPASy TrEMBL
Match: A0A6J1JQU5 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489006 PE=3 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 6.0e-36 Identity = 86/103 (83.50%), Postives = 94/103 (91.26%), Query Frame = 0
BLAST of HG10022225 vs. ExPASy TrEMBL
Match: A0A6J1FGY1 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445381 PE=3 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 6.6e-35 Identity = 83/103 (80.58%), Postives = 93/103 (90.29%), Query Frame = 0
BLAST of HG10022225 vs. ExPASy TrEMBL
Match: A0A6J1C1S4 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006638 PE=3 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 5.6e-34 Identity = 85/104 (81.73%), Postives = 91/104 (87.50%), Query Frame = 0
BLAST of HG10022225 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 79.7 bits (195), Expect = 1.5e-15 Identity = 50/114 (43.86%), Postives = 74/114 (64.91%), Query Frame = 0
BLAST of HG10022225 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) ) HSP 1 Score: 77.4 bits (189), Expect = 7.5e-15 Identity = 50/112 (44.64%), Postives = 70/112 (62.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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