HG10022225 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10022225
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionCASP-like protein
LocationChr05: 22091454 .. 22091882 (-)
RNA-Seq ExpressionHG10022225
SyntenyHG10022225
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGCTACTATTATCATCGGGATCATATTCAATCTTTTGCAAATCGCGTTCACACTCTTTAACATCGTTAAAAATGGCAACAGTACTATATTATTCGATTTCTTTGGCGACAAGGTACGCTAGATATGTATATATATATAATTTGATTTTCTGCCGTGCAATTGTTATATATAATAAGGTAGAAAATTAATAATTAAATAAAAATAAATTGGTTTTTATTTGGTGCAGTTTTTGTCATACCTTCTAGCAACAGGCACAGCAGCTGGACTTGGACTGGCAGTGGATTTGAAAAAAATAGACCCAGATGATTTATTTGGTTCATTCTTTGATAAGGCATATGCAGCATCGACTCTTCTTTTGTTTGCATTCTTTTGTGCTGCAGCTGTCTCTATTCTCTCTTCCTTTGCACTCTCCATCAGATCTTAA

mRNA sequence

ATGCTTGCTACTATTATCATCGGGATCATATTCAATCTTTTGCAAATCGCGTTCACACTCTTTAACATCGTTAAAAATGGCAACAGTACTATATTATTCGATTTCTTTGGCGACAAGTTTTTGTCATACCTTCTAGCAACAGGCACAGCAGCTGGACTTGGACTGGCAGTGGATTTGAAAAAAATAGACCCAGATGATTTATTTGGTTCATTCTTTGATAAGGCATATGCAGCATCGACTCTTCTTTTGTTTGCATTCTTTTGTGCTGCAGCTGTCTCTATTCTCTCTTCCTTTGCACTCTCCATCAGATCTTAA

Coding sequence (CDS)

ATGCTTGCTACTATTATCATCGGGATCATATTCAATCTTTTGCAAATCGCGTTCACACTCTTTAACATCGTTAAAAATGGCAACAGTACTATATTATTCGATTTCTTTGGCGACAAGTTTTTGTCATACCTTCTAGCAACAGGCACAGCAGCTGGACTTGGACTGGCAGTGGATTTGAAAAAAATAGACCCAGATGATTTATTTGGTTCATTCTTTGATAAGGCATATGCAGCATCGACTCTTCTTTTGTTTGCATTCTTTTGTGCTGCAGCTGTCTCTATTCTCTCTTCCTTTGCACTCTCCATCAGATCTTAA

Protein sequence

MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFALSIRS
Homology
BLAST of HG10022225 vs. NCBI nr
Match: XP_038877616.1 (CASP-like protein 4D1 [Benincasa hispida])

HSP 1 Score: 177.9 bits (450), Expect = 4.4e-41
Identity = 96/104 (92.31%), Postives = 100/104 (96.15%), Query Frame = 0

Query: 1   MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLK 60
           MLATIIIGI+FNLLQIAF+LFNIVKNGNSTILFDFFGDKFLSYLL TGTAAG GL+VDLK
Sbjct: 52  MLATIIIGIVFNLLQIAFSLFNIVKNGNSTILFDFFGDKFLSYLLGTGTAAGFGLSVDLK 111

Query: 61  KIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFALSIRS 105
           KIDPDD FGSFFDKAYAASTLLLFAFFC+AAVSILSSFALS RS
Sbjct: 112 KIDPDDFFGSFFDKAYAASTLLLFAFFCSAAVSILSSFALSKRS 155

BLAST of HG10022225 vs. NCBI nr
Match: XP_004142832.1 (CASP-like protein 4D1 [Cucumis sativus] >KGN51296.1 hypothetical protein Csa_007994 [Cucumis sativus])

HSP 1 Score: 167.5 bits (423), Expect = 5.9e-38
Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 0

Query: 1   MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLK 60
           MLATIIIG++FNLLQIAF+LFNIVKNG+ TILFDFFGDKFLSYLLATG AAG G+ VDLK
Sbjct: 52  MLATIIIGLVFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLK 111

Query: 61  KIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFALSIRS 105
           K+DPDDLF  FFDKAYAASTLLLFAFFC+AAVSILSSFALS RS
Sbjct: 112 KVDPDDLFRIFFDKAYAASTLLLFAFFCSAAVSILSSFALSKRS 155

BLAST of HG10022225 vs. NCBI nr
Match: XP_008458890.1 (PREDICTED: CASP-like protein 4D1 [Cucumis melo])

HSP 1 Score: 164.5 bits (415), Expect = 5.0e-37
Identity = 89/104 (85.58%), Postives = 96/104 (92.31%), Query Frame = 0

Query: 1   MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLK 60
           MLATIIIG++FNLLQIAF+LFNIVKNG+ TILFDFFGDKFLSYLLATG AAG G+ VDLK
Sbjct: 52  MLATIIIGLVFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLK 111

Query: 61  KIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFALSIRS 105
           K DPDDLF +FFDKAYAAS LLLFAFFC+AAVSILSSFALS RS
Sbjct: 112 KKDPDDLFRTFFDKAYAASALLLFAFFCSAAVSILSSFALSKRS 155

BLAST of HG10022225 vs. NCBI nr
Match: XP_022992767.1 (CASP-like protein 4D1 [Cucurbita maxima])

HSP 1 Score: 159.8 bits (403), Expect = 1.2e-35
Identity = 86/103 (83.50%), Postives = 94/103 (91.26%), Query Frame = 0

Query: 1   MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLK 60
           +LATIIIGI+FNLLQIAF+LFNIVK    TILFDFFGDKFLSYLLATGTAAG GL+VDL+
Sbjct: 52  VLATIIIGIVFNLLQIAFSLFNIVKGATGTILFDFFGDKFLSYLLATGTAAGFGLSVDLQ 111

Query: 61  KIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFALSIR 104
            +DPDD FG+FFDKAYAAS LLLFAFFC+AAVSILSSFALS R
Sbjct: 112 TLDPDDYFGTFFDKAYAASALLLFAFFCSAAVSILSSFALSKR 154

BLAST of HG10022225 vs. NCBI nr
Match: XP_023549516.1 (CASP-like protein 4D1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 159.1 bits (401), Expect = 2.1e-35
Identity = 85/103 (82.52%), Postives = 94/103 (91.26%), Query Frame = 0

Query: 1   MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLK 60
           +LATIIIGI+FNLLQIAF+LFNIVK    TILFDFFGDKFLSYLLATGTAAG GL+VDL+
Sbjct: 52  VLATIIIGIVFNLLQIAFSLFNIVKGATGTILFDFFGDKFLSYLLATGTAAGFGLSVDLQ 111

Query: 61  KIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFALSIR 104
            +DPDD FG+FFDKAYAAS LLLFAFFC+AAVSI+SSFALS R
Sbjct: 112 TLDPDDYFGTFFDKAYAASALLLFAFFCSAAVSIISSFALSKR 154

BLAST of HG10022225 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 6.6e-16
Identity = 49/106 (46.23%), Postives = 70/106 (66.04%), Query Frame = 0

Query: 1   MLATIIIGIIFNLLQIAFTLF-----NIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGL 60
           MLATI+IG+ + +LQIAFTL+     N + +G+  + FDFFGDK +SY+L TG AAG   
Sbjct: 59  MLATIVIGLAYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFAS 118

Query: 61  AVDLKKI-DPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFAL 101
             D+K +      F +F +K YA+++LLL  F C A +S+ SS+AL
Sbjct: 119 TKDIKPVFSGSGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYAL 164

BLAST of HG10022225 vs. ExPASy Swiss-Prot
Match: C6T1Z6 (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 3.3e-15
Identity = 51/105 (48.57%), Postives = 71/105 (67.62%), Query Frame = 0

Query: 1   MLATIIIGIIFNLLQIAFTLFNIVK-----NGNSTILFDFFGDKFLSYLLATGTAAGLGL 60
           M++TIIIG  +NLLQ+A ++F +V      +G+   LFDFFGDK +SYLL +G+AAG G+
Sbjct: 64  MISTIIIGFAYNLLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGV 123

Query: 61  AVDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFAL 101
            V+L +  P +   SF DKA A+++LLL AF   A  S  +SFAL
Sbjct: 124 TVELGRGVPSN---SFMDKANASASLLLIAFLFTAVASTFTSFAL 165

BLAST of HG10022225 vs. ExPASy Swiss-Prot
Match: A1XGB4 (CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 1.6e-14
Identity = 47/107 (43.93%), Postives = 68/107 (63.55%), Query Frame = 0

Query: 1   MLATIIIGIIFNLLQIAFTLFNIVK----NGNSTILFDFFGDKFLSYLLATGTAAGLGLA 60
           ++AT+IIG+ + LLQIAF++  +       G   +LFDF+GDKF+SY L TG AA  G+ 
Sbjct: 59  LIATVIIGMAYTLLQIAFSISLLTTGNRIGGEGFLLFDFYGDKFISYFLVTGAAASFGMT 118

Query: 61  VDLKKIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFALSIR 104
            DLK+++  D +  F + + AA++L L  FF A A SI SS+ L  R
Sbjct: 119 QDLKQLEGSDNYSKFLNTSNAAASLCLIGFFFAVASSIFSSYNLPKR 165

BLAST of HG10022225 vs. ExPASy Swiss-Prot
Match: Q56X75 (CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 2.1e-14
Identity = 50/114 (43.86%), Postives = 74/114 (64.91%), Query Frame = 0

Query: 1   MLATIIIGIIFNLLQIAFTLFNI---VKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAV 60
           ML+  +IG+++ ++Q+ FT+      VKN  +  L DF+GDK +SYL+ATG+AAG G+  
Sbjct: 62  MLSAAVIGLVYAVIQLFFTISEFATGVKNPFNYQL-DFYGDKLISYLVATGSAAGFGVTK 121

Query: 61  DLK-------KIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFALSIRS 105
           DLK        +D  D    FF K YA+++LLLFAF C A +S+ SSFA++ R+
Sbjct: 122 DLKDTFLALVALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKRN 174

BLAST of HG10022225 vs. ExPASy Swiss-Prot
Match: Q8GWD5 (CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.1e-13
Identity = 50/112 (44.64%), Postives = 70/112 (62.50%), Query Frame = 0

Query: 1   MLATIIIGIIFNLLQIAFTL--FNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVD 60
           ML+  +IG+++ ++Q+  T+  F   K    T  FDF+GDK +SYLLATG+AAG G++ D
Sbjct: 62  MLSAAVIGLVYAVVQLFLTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKD 121

Query: 61  LK-------KIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFALSIR 104
           LK       + D  D    FF K YA+++LLLFAF   A +S+ SS ALS R
Sbjct: 122 LKDTYIALIEFDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKR 173

BLAST of HG10022225 vs. ExPASy TrEMBL
Match: A0A0A0KU83 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515010 PE=3 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.9e-38
Identity = 90/104 (86.54%), Postives = 97/104 (93.27%), Query Frame = 0

Query: 1   MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLK 60
           MLATIIIG++FNLLQIAF+LFNIVKNG+ TILFDFFGDKFLSYLLATG AAG G+ VDLK
Sbjct: 52  MLATIIIGLVFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLK 111

Query: 61  KIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFALSIRS 105
           K+DPDDLF  FFDKAYAASTLLLFAFFC+AAVSILSSFALS RS
Sbjct: 112 KVDPDDLFRIFFDKAYAASTLLLFAFFCSAAVSILSSFALSKRS 155

BLAST of HG10022225 vs. ExPASy TrEMBL
Match: A0A1S3C9H1 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498162 PE=3 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.4e-37
Identity = 89/104 (85.58%), Postives = 96/104 (92.31%), Query Frame = 0

Query: 1   MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLK 60
           MLATIIIG++FNLLQIAF+LFNIVKNG+ TILFDFFGDKFLSYLLATG AAG G+ VDLK
Sbjct: 52  MLATIIIGLVFNLLQIAFSLFNIVKNGDGTILFDFFGDKFLSYLLATGAAAGFGVGVDLK 111

Query: 61  KIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFALSIRS 105
           K DPDDLF +FFDKAYAAS LLLFAFFC+AAVSILSSFALS RS
Sbjct: 112 KKDPDDLFRTFFDKAYAASALLLFAFFCSAAVSILSSFALSKRS 155

BLAST of HG10022225 vs. ExPASy TrEMBL
Match: A0A6J1JQU5 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489006 PE=3 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 6.0e-36
Identity = 86/103 (83.50%), Postives = 94/103 (91.26%), Query Frame = 0

Query: 1   MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLK 60
           +LATIIIGI+FNLLQIAF+LFNIVK    TILFDFFGDKFLSYLLATGTAAG GL+VDL+
Sbjct: 52  VLATIIIGIVFNLLQIAFSLFNIVKGATGTILFDFFGDKFLSYLLATGTAAGFGLSVDLQ 111

Query: 61  KIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFALSIR 104
            +DPDD FG+FFDKAYAAS LLLFAFFC+AAVSILSSFALS R
Sbjct: 112 TLDPDDYFGTFFDKAYAASALLLFAFFCSAAVSILSSFALSKR 154

BLAST of HG10022225 vs. ExPASy TrEMBL
Match: A0A6J1FGY1 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445381 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 6.6e-35
Identity = 83/103 (80.58%), Postives = 93/103 (90.29%), Query Frame = 0

Query: 1   MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLK 60
           +LATIIIG++FNLLQIAF+L NIVK    TILFDFFGDKFLSYLLATGTAAG GL+VDL+
Sbjct: 52  VLATIIIGVVFNLLQIAFSLLNIVKGATGTILFDFFGDKFLSYLLATGTAAGFGLSVDLQ 111

Query: 61  KIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFALSIR 104
            +DPDD FG+FFDKAYAAS LLLFAFFC+AAVSI+SSFALS R
Sbjct: 112 TLDPDDYFGTFFDKAYAASALLLFAFFCSAAVSIISSFALSKR 154

BLAST of HG10022225 vs. ExPASy TrEMBL
Match: A0A6J1C1S4 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006638 PE=3 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 5.6e-34
Identity = 85/104 (81.73%), Postives = 91/104 (87.50%), Query Frame = 0

Query: 1   MLATIIIGIIFNLLQIAFTLFNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVDLK 60
           +LATIIIGII NLLQIAF+LFN VKNG+ TILFDFFGDKFLSYLLATG AAG GL VDL+
Sbjct: 52  VLATIIIGIILNLLQIAFSLFNTVKNGSGTILFDFFGDKFLSYLLATGMAAGFGLTVDLQ 111

Query: 61  KIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFALSIRS 105
             D DD +G FFDKAYAAS LLLFAFFCAAAVSILSSFALS R+
Sbjct: 112 TTDADDEYGEFFDKAYAASALLLFAFFCAAAVSILSSFALSNRA 155

BLAST of HG10022225 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 79.7 bits (195), Expect = 1.5e-15
Identity = 50/114 (43.86%), Postives = 74/114 (64.91%), Query Frame = 0

Query: 1   MLATIIIGIIFNLLQIAFTLFNI---VKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAV 60
           ML+  +IG+++ ++Q+ FT+      VKN  +  L DF+GDK +SYL+ATG+AAG G+  
Sbjct: 62  MLSAAVIGLVYAVIQLFFTISEFATGVKNPFNYQL-DFYGDKLISYLVATGSAAGFGVTK 121

Query: 61  DLK-------KIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFALSIRS 105
           DLK        +D  D    FF K YA+++LLLFAF C A +S+ SSFA++ R+
Sbjct: 122 DLKDTFLALVALDSTDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKRN 174

BLAST of HG10022225 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 77.4 bits (189), Expect = 7.5e-15
Identity = 50/112 (44.64%), Postives = 70/112 (62.50%), Query Frame = 0

Query: 1   MLATIIIGIIFNLLQIAFTL--FNIVKNGNSTILFDFFGDKFLSYLLATGTAAGLGLAVD 60
           ML+  +IG+++ ++Q+  T+  F   K    T  FDF+GDK +SYLLATG+AAG G++ D
Sbjct: 62  MLSAAVIGLVYAVVQLFLTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKD 121

Query: 61  LK-------KIDPDDLFGSFFDKAYAASTLLLFAFFCAAAVSILSSFALSIR 104
           LK       + D  D    FF K YA+++LLLFAF   A +S+ SS ALS R
Sbjct: 122 LKDTYIALIEFDSTDPVDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKR 173

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038877616.14.4e-4192.31CASP-like protein 4D1 [Benincasa hispida][more]
XP_004142832.15.9e-3886.54CASP-like protein 4D1 [Cucumis sativus] >KGN51296.1 hypothetical protein Csa_007... [more]
XP_008458890.15.0e-3785.58PREDICTED: CASP-like protein 4D1 [Cucumis melo][more]
XP_022992767.11.2e-3583.50CASP-like protein 4D1 [Cucurbita maxima][more]
XP_023549516.12.1e-3582.52CASP-like protein 4D1 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
B9SXY86.6e-1646.23CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1[more]
C6T1Z63.3e-1548.57CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1[more]
A1XGB41.6e-1443.93CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1[more]
Q56X752.1e-1443.86CASP-like protein 4D2 OS=Arabidopsis thaliana OX=3702 GN=At2g39518 PE=2 SV=1[more]
Q8GWD51.1e-1344.64CASP-like protein 4D1 OS=Arabidopsis thaliana OX=3702 GN=At2g39530 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KU832.9e-3886.54CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_5G515010 PE=3 SV=1[more]
A0A1S3C9H12.4e-3785.58CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498162 PE=3 SV=1[more]
A0A6J1JQU56.0e-3683.50CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489006 PE=3 SV=1[more]
A0A6J1FGY16.6e-3580.58CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445381 PE=3 SV=1[more]
A0A6J1C1S45.6e-3481.73CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006638 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT2G39518.11.5e-1543.86Uncharacterised protein family (UPF0497) [more]
AT2G39530.17.5e-1544.64Uncharacterised protein family (UPF0497) [more]
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006702Casparian strip membrane protein domainPFAMPF04535DUF588coord: 3..88
e-value: 7.1E-8
score: 32.4
NoneNo IPR availablePANTHERPTHR11615NITRATE, FORMATE, IRON DEHYDROGENASEcoord: 1..101
NoneNo IPR availablePANTHERPTHR11615:SF148CASP-LIKE PROTEIN 4D2coord: 1..101

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10022225.1HG10022225.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding