HG10022222 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10022222
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	CASP-like protein
Location	Chr05: 22071858 .. 22073008 (-)
RNA-Seq Expression	HG10022222
Synteny	HG10022222

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCAAAAATGGGTTCAAAAATTGCTTCTTTAGTGCTGAGAATTCTCACTTTTGTTTTCCTCTTAATTTCCATCATCGTTCTGGCTACCAATTCCAAAACTGTAGGAGATGTGGTGTTTCATTTCCATAATGTCAATTCCTATAGGTATTTTTTATATTATTTTTTTTTTCTACACTAATTTATTAGTTTTTATTTATTTATTTCTATTGAGTTTCATGATTTATTTAATTAACTTTTTGAAATTTTTTATGAAGATATGCAATGGCAACTATAATTATTGGCGGTGCATTCAACCTCTTGCAAATTGCCTTGGCCCTTTATCGTCTCGTAACCAAAACCGATGGCAGTCTTTTATTCGACTTCTATGGTGATAAGGTATTATAATTGATACCATATATCTCTTAAATATATGTTTAAATAGGTTAATTTGTTGAAAATTTTACGTTAGAAAAATCAACAACCTCATCAACTATTCCTATCTTTATCAATTAATTAAAATATTTTAAACTCTTATTTATGGATAATTAAATAACTTAATATGAAATTTAAGAATTAATTTTTCTAAGATATTGATTTAAAAAAACAATAATTGTCTAAATTTTAATAAACCCACTAAACTTAAAATGTTAAGCTCGTCCATGAACCAATTTTAGTAGCGTTGAAAATATAAATTTAGCATATATTATAAGAAAATTATTGCAAATAGAAAAAATATTAAACTATTTATAAATATAGAAAATTTTTATTGTTTATTAGACCAATAGATTTCAATAGCTTAAATAGAGTAATAGAAGTTTATCGCAGTTTATTGCTCAAGAGTAAAAAGTCTGTCGCTCTTTCTATATTTGTAAATAGTTTCACTAATTTTTTTTATATTTAGAAAGAACCCTATATTATATATGTGAATGGTGAATGACTGTATATATATAATTAATGAGAAGTTTGTTTCAGGTATTATCATACGTTTTGTTGGCGGGAGCGGCGGCGGCGCTGGGTTCTAGCATAGACTTGAAGGCTAATACGACGTTTTTGGAGTCGTTTTTCGACCATGGGAACGCCGCTGCGGCTCTTCTTCTTCTTGCTTTTTTCTGTAGTGCTGTCGTTTCTGTTCTTTCTTCTTTGGCCCTTTCTAACAAAGCTAATTAG

mRNA sequence

ATGGAAGCAAAAATGGGTTCAAAAATTGCTTCTTTAGTGCTGAGAATTCTCACTTTTGTTTTCCTCTTAATTTCCATCATCGTTCTGGCTACCAATTCCAAAACTGTAGGAGATGTGGTGTTTCATTTCCATAATGTCAATTCCTATAGATATGCAATGGCAACTATAATTATTGGCGGTGCATTCAACCTCTTGCAAATTGCCTTGGCCCTTTATCGTCTCGTAACCAAAACCGATGGCAGTCTTTTATTCGACTTCTATGGTGATAAGGTATTATCATACGTTTTGTTGGCGGGAGCGGCGGCGGCGCTGGGTTCTAGCATAGACTTGAAGGCTAATACGACGTTTTTGGAGTCGTTTTTCGACCATGGGAACGCCGCTGCGGCTCTTCTTCTTCTTGCTTTTTTCTGTAGTGCTGTCGTTTCTGTTCTTTCTTCTTTGGCCCTTTCTAACAAAGCTAATTAG

Coding sequence (CDS)

ATGGAAGCAAAAATGGGTTCAAAAATTGCTTCTTTAGTGCTGAGAATTCTCACTTTTGTTTTCCTCTTAATTTCCATCATCGTTCTGGCTACCAATTCCAAAACTGTAGGAGATGTGGTGTTTCATTTCCATAATGTCAATTCCTATAGATATGCAATGGCAACTATAATTATTGGCGGTGCATTCAACCTCTTGCAAATTGCCTTGGCCCTTTATCGTCTCGTAACCAAAACCGATGGCAGTCTTTTATTCGACTTCTATGGTGATAAGGTATTATCATACGTTTTGTTGGCGGGAGCGGCGGCGGCGCTGGGTTCTAGCATAGACTTGAAGGCTAATACGACGTTTTTGGAGTCGTTTTTCGACCATGGGAACGCCGCTGCGGCTCTTCTTCTTCTTGCTTTTTTCTGTAGTGCTGTCGTTTCTGTTCTTTCTTCTTTGGCCCTTTCTAACAAAGCTAATTAG

Protein sequence

MEAKMGSKIASLVLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKANTTFLESFFDHGNAAAALLLLAFFCSAVVSVLSSLALSNKAN

Homology

[Close]

BLAST of HG10022222 vs. NCBI nr
Match: XP_038877615.1 (CASP-like protein 4D1 [Benincasa hispida])

HSP 1 Score: 254.2 bits (648), Expect = 7.1e-64
Identity = 139/154 (90.26%), Postives = 145/154 (94.16%), Query Frame = 0


Query: 1   MEAKMGSKIASLVLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGG 60
           MEAKMGSKIASLVLR++TFVFLLISIIVLATNSKT+GD  FHFHNVNSYRYA+ TIIIGG
Sbjct: 1   MEAKMGSKIASLVLRVVTFVFLLISIIVLATNSKTIGDAKFHFHNVNSYRYAITTIIIGG 60

Query: 61  AFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKANTTFLESF 120
           AFNLLQIALALYRLVTKTDG+LLFDFYGDKVLSYVLL+GAAAALGS IDLKAN   L SF
Sbjct: 61  AFNLLQIALALYRLVTKTDGNLLFDFYGDKVLSYVLLSGAAAALGSGIDLKANLEVLASF 120

Query: 121 FDHGNAAAALLLLAFFCSAVVSVLSSLALSNKAN 155
           FDHGNA AALLLLAFFCSAVVSVLSSLALSNKAN
Sbjct: 121 FDHGNAGAALLLLAFFCSAVVSVLSSLALSNKAN 154

[Close]

BLAST of HG10022222 vs. NCBI nr
Match: XP_008458887.1 (PREDICTED: CASP-like protein 4D1 [Cucumis melo])

HSP 1 Score: 240.7 bits (613), Expect = 8.1e-60
Identity = 131/154 (85.06%), Postives = 140/154 (90.91%), Query Frame = 0


Query: 1   MEAKMGSKIASLVLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGG 60
           MEAKM +KIAS VLR+LTFVFLL+SIIVL TNSKT+G+   HFHNVNSYRYAMATIIIGG
Sbjct: 1   MEAKMATKIASFVLRVLTFVFLLVSIIVLGTNSKTIGNDEVHFHNVNSYRYAMATIIIGG 60

Query: 61  AFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKANTTFLESF 120
           AFNLLQIALALYRLVTKTDGS+LFDFYGDKVLSY LLAGAAAALGSS+DLKAN   L SF
Sbjct: 61  AFNLLQIALALYRLVTKTDGSILFDFYGDKVLSYFLLAGAAAALGSSVDLKANMDMLNSF 120

Query: 121 FDHGNAAAALLLLAFFCSAVVSVLSSLALSNKAN 155
           FD GNAAAALLLLAF CSA++SVLSSLALSNK N
Sbjct: 121 FDQGNAAAALLLLAFLCSAIISVLSSLALSNKPN 154

[Close]

BLAST of HG10022222 vs. NCBI nr
Match: XP_031741109.1 (CASP-like protein 4D1 isoform X1 [Cucumis sativus] >KAE8648540.1 hypothetical protein Csa_007999 [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 2.6e-58
Identity = 128/154 (83.12%), Postives = 140/154 (90.91%), Query Frame = 0


Query: 1   MEAKMGSKIASLVLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGG 60
           MEAKMG+KIAS VLR+L F FLLISIIVL TNSKTVG+   HFHNVNSYR+AMATII+GG
Sbjct: 1   MEAKMGTKIASFVLRVLIFAFLLISIIVLGTNSKTVGNSESHFHNVNSYRFAMATIIVGG 60

Query: 61  AFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKANTTFLESF 120
           AFNLLQIAL+LYRL+TKTDGS+LFDFYGDK+LSYVLLAGAAAALGSSIDLKAN +   SF
Sbjct: 61  AFNLLQIALSLYRLITKTDGSILFDFYGDKILSYVLLAGAAAALGSSIDLKANMSEWSSF 120

Query: 121 FDHGNAAAALLLLAFFCSAVVSVLSSLALSNKAN 155
           FD GNAAAALLLLAF CSA++SVLSSLALSNK N
Sbjct: 121 FDQGNAAAALLLLAFLCSAIISVLSSLALSNKPN 154

[Close]

BLAST of HG10022222 vs. NCBI nr
Match: XP_022992769.1 (CASP-like protein 4D1 [Cucurbita maxima])

HSP 1 Score: 230.7 bits (587), Expect = 8.4e-57
Identity = 128/152 (84.21%), Postives = 137/152 (90.13%), Query Frame = 0


Query: 1   MEAKMGSKIASLVLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGG 60
           MEAKMG+KIAS VLR+LTFVFLLISIIVL T SKTVGD    FHNVNSYR+AMATIIIGG
Sbjct: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGG 60

Query: 61  AFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKANTTFLESF 120
           AFNLLQIALALYRL+TKTDG +LFDF+GDKVLSY LLAGAAAALGS+IDLKAN  +L SF
Sbjct: 61  AFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120

Query: 121 FDHGNAAAALLLLAFFCSAVVSVLSSLALSNK 153
           FD GNAAAALLLLAF CSAVVSVLSS ALS+K
Sbjct: 121 FDQGNAAAALLLLAFLCSAVVSVLSSFALSHK 152

[Close]

BLAST of HG10022222 vs. NCBI nr
Match: XP_022939465.1 (CASP-like protein 4D1 [Cucurbita moschata])

HSP 1 Score: 228.8 bits (582), Expect = 3.2e-56
Identity = 126/152 (82.89%), Postives = 137/152 (90.13%), Query Frame = 0


Query: 1   MEAKMGSKIASLVLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGG 60
           MEAKMG+KIAS VLR+LTFVFLLISIIVL T SKTVGD    FHNVNSYR+AMATIIIGG
Sbjct: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGG 60

Query: 61  AFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKANTTFLESF 120
           AFNLLQIALALYRL+TK+DG +LFDF+GDKVLSY LLAGAAAALGS+IDLKAN  +L SF
Sbjct: 61  AFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120

Query: 121 FDHGNAAAALLLLAFFCSAVVSVLSSLALSNK 153
           FD GNAAAALLLLAF CSA+VSVLSS ALS+K
Sbjct: 121 FDQGNAAAALLLLAFLCSAIVSVLSSFALSHK 152

[Close]

BLAST of HG10022222 vs. ExPASy Swiss-Prot
Match: B9SXY8 (CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.5e-27
Identity = 73/157 (46.50%), Postives = 110/157 (70.06%), Query Frame = 0


Query: 5   MGSKIASLVLRILTFVFLLISIIVLATNSKTVG----DVVFHFHNVNSYRYAMATIIIGG 64
           + S++A+L+LRILTF+FL+ S+++L TN+ T+     +V  HF +V +YRY +ATI+IG 
Sbjct: 8   LASRMAALILRILTFIFLIASLVILTTNTATLELDLVEVKVHFKDVYAYRYMLATIVIGL 67

Query: 65  AFNLLQIALALYRLVT-----KTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLK---A 124
           A+ +LQIA  LY + T       DG+L FDF+GDKV+SY+L+ GAAA   S+ D+K   +
Sbjct: 68  AYTVLQIAFTLYYVATGNRMMSGDGNLAFDFFGDKVISYILVTGAAAGFASTKDIKPVFS 127

Query: 125 NTTFLESFFDHGNAAAALLLLAFFCSAVVSVLSSLAL 150
            +   ++F + G A+A+LLL+ F C+AV+SV SS AL
Sbjct: 128 GSGDFDAFINKGYASASLLLIGFVCTAVLSVFSSYAL 164

[Close]

BLAST of HG10022222 vs. ExPASy Swiss-Prot
Match: C6T1Z6 (CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 2.0e-24
Identity = 69/154 (44.81%), Postives = 106/154 (68.83%), Query Frame = 0


Query: 6   GSKIASLVLRILTFVFLLISIIVLATNSKTVGD--VVFHFHNVNSYRYAMATIIIGGAFN 65
           GS+   L+LR+LTFVFLLI++I++A   +T  +  V   F+++ +YRY ++TIIIG A+N
Sbjct: 16  GSRTVLLLLRVLTFVFLLIALILIAIVKQTDDETGVEIKFNDIYAYRYMISTIIIGFAYN 75

Query: 66  LLQIALALYRLVT-----KTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKANTTFLE 125
           LLQ+AL+++ +V+       DG  LFDF+GDK++SY+L++G+AA  G +++L        
Sbjct: 76  LLQMALSIFTVVSGNRVLSGDGGYLFDFFGDKIISYLLISGSAAGFGVTVELGRGVP-SN 135

Query: 126 SFFDHGNAAAALLLLAFFCSAVVSVLSSLALSNK 153
           SF D  NA+A+LLL+AF  +AV S  +S AL  K
Sbjct: 136 SFMDKANASASLLLIAFLFTAVASTFTSFALPKK 168

[Close]

BLAST of HG10022222 vs. ExPASy Swiss-Prot
Match: B9NBE5 (CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 SV=2)

HSP 1 Score: 113.2 bits (282), Expect = 2.6e-24
Identity = 71/160 (44.38%), Postives = 103/160 (64.38%), Query Frame = 0


Query: 5   MGSKIASLVLRILTFVFLLISIIVLATNSKTVGDVVFHF----HNVNSYRYAMATIIIGG 64
           M S++ +L LR+LTF FL++S++++ TN+ T+   +  F     +  SYRY +A I  G 
Sbjct: 17  MVSRMTALFLRVLTFAFLMVSLVIMTTNTGTIEIGIDEFKVRSKDFYSYRYMLAAIAFGL 76

Query: 65  AFNLLQIALALYRL------VTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKANT 124
            + +LQIAL L  +       T  DG+L+FDFYGDKV+SY+L  GAAAA G++ +LK   
Sbjct: 77  TYTILQIALTLNHISKRNGAQTSGDGNLVFDFYGDKVVSYILATGAAAAFGATKELKTQL 136

Query: 125 TFL--ESFFDHGNAAAALLLLAFFCSAVVSVLSSLALSNK 153
             L  + FF+ G A+A+LLLL F C+A++SV SS AL  K
Sbjct: 137 AGLGGDKFFNKGYASASLLLLGFVCTAILSVFSSYALPKK 176

[Close]

BLAST of HG10022222 vs. ExPASy Swiss-Prot
Match: A1XGB4 (CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.1e-22
Identity = 71/152 (46.71%), Postives = 96/152 (63.16%), Query Frame = 0


Query: 11  SLVLRILTFVFLLISIIVLATNSKTV----GDVVFHFHNVNSYRYAMATIIIGGAFNLLQ 70
           SL++RILT + LLIS IV+ATN++TV    GDV   F +  +YRY +AT+IIG A+ LLQ
Sbjct: 14  SLIVRILTLICLLISFIVIATNNQTVSTVAGDVKIKFKDFYAYRYLIATVIIGMAYTLLQ 73

Query: 71  IALALYRLVTKT----DGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLK--ANTTFLESF 130
           IA ++  L T      +G LLFDFYGDK +SY L+ GAAA+ G + DLK    +     F
Sbjct: 74  IAFSISLLTTGNRIGGEGFLLFDFYGDKFISYFLVTGAAASFGMTQDLKQLEGSDNYSKF 133

Query: 131 FDHGNAAAALLLLAFFCSAVVSVLSSLALSNK 153
            +  NAAA+L L+ FF +   S+ SS  L  +
Sbjct: 134 LNTSNAAASLCLIGFFFAVASSIFSSYNLPKR 165

[Close]

BLAST of HG10022222 vs. ExPASy Swiss-Prot
Match: D7LD59 (CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_903204 PE=3 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 8.6e-20
Identity = 63/160 (39.38%), Postives = 100/160 (62.50%), Query Frame = 0


Query: 8   KIASLVLRILTFVFLLISIIVLATNSKTV----GDVVFHFHNVNSYRYAMATIIIGGAFN 67
           K++ L+LR+LT VFL+I++I+L+TNS T+      + FHF +V +YRY ++  +IG  + 
Sbjct: 14  KVSLLLLRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLLYA 73

Query: 68  LLQIALALYRLVT--KTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLK---------A 127
           ++Q+   +    T  K   +   DFYGDK++SY++  G+AA  G S DLK          
Sbjct: 74  VIQLFFTISEFATGMKNPFNYQLDFYGDKLISYLVATGSAAGFGVSKDLKDAFIALVALD 133

Query: 128 NTTFLESFFDHGNAAAALLLLAFFCSAVVSVLSSLALSNK 153
           +T  ++ FF  G A+A+LLL +F C AV+SV SSLA++ +
Sbjct: 134 STDPVDKFFSRGYASASLLLFSFICLAVLSVFSSLAIAKR 173

[Close]

BLAST of HG10022222 vs. ExPASy TrEMBL
Match: A0A1S3C911 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498157 PE=3 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 3.9e-60
Identity = 131/154 (85.06%), Postives = 140/154 (90.91%), Query Frame = 0


Query: 1   MEAKMGSKIASLVLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGG 60
           MEAKM +KIAS VLR+LTFVFLL+SIIVL TNSKT+G+   HFHNVNSYRYAMATIIIGG
Sbjct: 1   MEAKMATKIASFVLRVLTFVFLLVSIIVLGTNSKTIGNDEVHFHNVNSYRYAMATIIIGG 60

Query: 61  AFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKANTTFLESF 120
           AFNLLQIALALYRLVTKTDGS+LFDFYGDKVLSY LLAGAAAALGSS+DLKAN   L SF
Sbjct: 61  AFNLLQIALALYRLVTKTDGSILFDFYGDKVLSYFLLAGAAAALGSSVDLKANMDMLNSF 120

Query: 121 FDHGNAAAALLLLAFFCSAVVSVLSSLALSNKAN 155
           FD GNAAAALLLLAF CSA++SVLSSLALSNK N
Sbjct: 121 FDQGNAAAALLLLAFLCSAIISVLSSLALSNKPN 154

[Close]

BLAST of HG10022222 vs. ExPASy TrEMBL
Match: A0A6J1JYE7 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489007 PE=3 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 4.1e-57
Identity = 128/152 (84.21%), Postives = 137/152 (90.13%), Query Frame = 0


Query: 1   MEAKMGSKIASLVLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGG 60
           MEAKMG+KIAS VLR+LTFVFLLISIIVL T SKTVGD    FHNVNSYR+AMATIIIGG
Sbjct: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGG 60

Query: 61  AFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKANTTFLESF 120
           AFNLLQIALALYRL+TKTDG +LFDF+GDKVLSY LLAGAAAALGS+IDLKAN  +L SF
Sbjct: 61  AFNLLQIALALYRLITKTDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120

Query: 121 FDHGNAAAALLLLAFFCSAVVSVLSSLALSNK 153
           FD GNAAAALLLLAF CSAVVSVLSS ALS+K
Sbjct: 121 FDQGNAAAALLLLAFLCSAVVSVLSSFALSHK 152

[Close]

BLAST of HG10022222 vs. ExPASy TrEMBL
Match: A0A6J1FMS6 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445361 PE=3 SV=1)

HSP 1 Score: 228.8 bits (582), Expect = 1.5e-56
Identity = 126/152 (82.89%), Postives = 137/152 (90.13%), Query Frame = 0


Query: 1   MEAKMGSKIASLVLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGG 60
           MEAKMG+KIAS VLR+LTFVFLLISIIVL T SKTVGD    FHNVNSYR+AMATIIIGG
Sbjct: 1   MEAKMGTKIASFVLRVLTFVFLLISIIVLGTTSKTVGDEKLQFHNVNSYRFAMATIIIGG 60

Query: 61  AFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKANTTFLESF 120
           AFNLLQIALALYRL+TK+DG +LFDF+GDKVLSY LLAGAAAALGS+IDLKAN  +L SF
Sbjct: 61  AFNLLQIALALYRLITKSDGGVLFDFFGDKVLSYFLLAGAAAALGSTIDLKANIDWLNSF 120

Query: 121 FDHGNAAAALLLLAFFCSAVVSVLSSLALSNK 153
           FD GNAAAALLLLAF CSA+VSVLSS ALS+K
Sbjct: 121 FDQGNAAAALLLLAFLCSAIVSVLSSFALSHK 152

[Close]

BLAST of HG10022222 vs. ExPASy TrEMBL
Match: A0A6J1BZ60 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006565 PE=3 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 3.8e-47
Identity = 112/150 (74.67%), Postives = 129/150 (86.00%), Query Frame = 0


Query: 5   MGSKIASLVLRILTFVFLLISIIVLATNSKTVGDVVFHFHNVNSYRYAMATIIIGGAFNL 64
           MGSKIASLVLR++TFVFL ISIIVLATNS+  G++  HFHNVNSYR+AMATIIIGGAFNL
Sbjct: 7   MGSKIASLVLRVVTFVFLFISIIVLATNSQ--GNI--HFHNVNSYRFAMATIIIGGAFNL 66

Query: 65  LQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKANTTFLESFFDHG 124
           LQIAL+LY +++K+ G+LLF FYGDKVLSYVLL+GAAA LG  IDL AN   + SFF  G
Sbjct: 67  LQIALSLYYIISKSHGNLLFYFYGDKVLSYVLLSGAAAGLGGGIDLNANIEGMGSFFGKG 126

Query: 125 NAAAALLLLAFFCSAVVSVLSSLALSNKAN 155
           NAAAALLL+AF CSA +S+LSSLALSNK N
Sbjct: 127 NAAAALLLIAFLCSAAISILSSLALSNKPN 152

[Close]

BLAST of HG10022222 vs. ExPASy TrEMBL
Match: A0A6J1C1A4 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 3.7e-34
Identity = 90/162 (55.56%), Postives = 117/162 (72.22%), Query Frame = 0


Query: 1   MEAKMGSKIASLVLRILTFVFLLISIIVLATNSKTV-----GDVVFHFHNVNSYRYAMAT 60
           M A  GS+IASL+LRILTFV + IS++++ATNSKTV      +    F +V SYRY  A 
Sbjct: 1   MAASKGSRIASLILRILTFVLIFISLLIIATNSKTVLKGTEAEAKVEFKDVYSYRYLTAA 60

Query: 61  IIIGGAFNLLQIALALYRLVTKTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLKAN-- 120
            +IG A +LLQIAL LY +VTK+DG+  FD + DK+L+Y+LL+GA+A LG+ IDL++N  
Sbjct: 61  AVIGAALSLLQIALTLYHVVTKSDGTPFFDMFSDKLLTYLLLSGASAGLGAGIDLRSNYK 120

Query: 121 ---TTFLESFFDHGNAAAALLLLAFFCSAVVSVLSSLALSNK 153
                   SFFD G+A+AA+LLLAF CSAVVS+LSSLAL  K
Sbjct: 121 DLVGNIFNSFFDKGSASAAILLLAFICSAVVSILSSLALVRK 162

[Close]

BLAST of HG10022222 vs. TAIR 10
Match: AT2G39518.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 95.9 bits (237), Expect = 3.0e-20
Identity = 62/160 (38.75%), Postives = 98/160 (61.25%), Query Frame = 0


Query: 8   KIASLVLRILTFVFLLISIIVLATNSKTV----GDVVFHFHNVNSYRYAMATIIIGGAFN 67
           K+  L+LR+LT VFL+I++I+L+TNS T+      + FHF +V +YRY ++  +IG  + 
Sbjct: 14  KVLLLLLRVLTGVFLVIALIILSTNSVTIVSQGSALKFHFKDVYAYRYMLSAAVIGLVYA 73

Query: 68  LLQIALALYRLVT--KTDGSLLFDFYGDKVLSYVLLAGAAAALGSSIDLK---------A 127
           ++Q+   +    T  K   +   DFYGDK++SY++  G+AA  G + DLK          
Sbjct: 74  VIQLFFTISEFATGVKNPFNYQLDFYGDKLISYLVATGSAAGFGVTKDLKDTFLALVALD 133

Query: 128 NTTFLESFFDHGNAAAALLLLAFFCSAVVSVLSSLALSNK 153
           +T  ++ FF  G A+A+LLL AF C AV+SV SS A++ +
Sbjct: 134 STDPVDKFFSKGYASASLLLFAFICLAVLSVFSSFAMAKR 173

[Close]

BLAST of HG10022222 vs. TAIR 10
Match: AT2G39530.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 91.3 bits (225), Expect = 7.4e-19
Identity = 63/156 (40.38%), Postives = 96/156 (61.54%), Query Frame = 0


Query: 12  LVLRILTFVFLLISIIVLATNSKTV----GDVVFHFHNVNSYRYAMATIIIGGAFNLLQI 71
           L+LR+LT  FLLI++++++TN+ T+      +   F++V +YRY ++  +IG  + ++Q+
Sbjct: 18  LLLRVLTAAFLLITVVLISTNTVTLEISSTSIKLPFNDVYAYRYMLSAAVIGLVYAVVQL 77

Query: 72  ALALYRLVTKTDGSLL--FDFYGDKVLSYVLLAGAAAALGSSIDLK---------ANTTF 131
            L + +  T     L   FDFYGDKV+SY+L  G+AA  G S DLK          +T  
Sbjct: 78  FLTISQFATGKTHPLTYQFDFYGDKVISYLLATGSAAGFGVSKDLKDTYIALIEFDSTDP 137

Query: 132 LESFFDHGNAAAALLLLAFFCSAVVSVLSSLALSNK 153
           ++ FF  G A+A+LLL AF   AV+SV SSLALS +
Sbjct: 138 VDKFFSKGYASASLLLFAFVSLAVLSVFSSLALSKR 173

The following BLAST results are available for this feature:

BLAST of HG10022222 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038877615.1	7.1e-64	90.26	CASP-like protein 4D1 [Benincasa hispida]	[more]
XP_008458887.1	8.1e-60	85.06	PREDICTED: CASP-like protein 4D1 [Cucumis melo]	[more]
XP_031741109.1	2.6e-58	83.12	CASP-like protein 4D1 isoform X1 [Cucumis sativus] >KAE8648540.1 hypothetical pr...	[more]
XP_022992769.1	8.4e-57	84.21	CASP-like protein 4D1 [Cucurbita maxima]	[more]
XP_022939465.1	3.2e-56	82.89	CASP-like protein 4D1 [Cucurbita moschata]	[more]

BLAST of HG10022222 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B9SXY8	2.5e-27	46.50	CASP-like protein 4D1 OS=Ricinus communis OX=3988 GN=RCOM_1206790 PE=3 SV=1	[more]
C6T1Z6	2.0e-24	44.81	CASP-like protein 4D1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
B9NBE5	2.6e-24	44.38	CASP-like protein 4D1 OS=Populus trichocarpa OX=3694 GN=POPTR_0010s21230g PE=2 S...	[more]
A1XGB4	3.1e-22	46.71	CASP-like protein PIMP1 OS=Capsicum annuum OX=4072 GN=PIMP1 PE=2 SV=1	[more]
D7LD59	8.6e-20	39.38	CASP-like protein 4D2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]

BLAST of HG10022222 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C911	3.9e-60	85.06	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498157 PE=3 SV=1	[more]
A0A6J1JYE7	4.1e-57	84.21	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111489007 PE=3 SV=1	[more]
A0A6J1FMS6	1.5e-56	82.89	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111445361 PE=3 SV=1	[more]
A0A6J1BZ60	3.8e-47	74.67	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006565 PE=3 SV=1	[more]
A0A6J1C1A4	3.7e-34	55.56	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111006513 PE=3 SV=1	[more]

BLAST of HG10022222 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G39518.1	3.0e-20	38.75	Uncharacterised protein family (UPF0497)	[more]
AT2G39530.1	7.4e-19	40.38	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 6..137 e-value: 1.6E-20 score: 73.4
None	No IPR available	PANTHER	PTHR11615	NITRATE, FORMATE, IRON DEHYDROGENASE	coord: 6..153
None	No IPR available	PANTHER	PTHR11615:SF148	CASP-LIKE PROTEIN 4D2	coord: 6..153

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10022222.1	HG10022222.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane