HG10022221 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10022221
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Endoplasmic reticulum transmembrane protein
Location	Chr05: 22069598 .. 22069891 (+)
RNA-Seq Expression	HG10022221
Synteny	HG10022221

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTCAAGTTGTGTTGAAGCTTGCATTGAGCGAAATGGCCATAATTTTGGCTCTGTTGTTCAGAACTCCATTCAGAAATTTGATAGTCAAAGGATTGGACAGATTGAAGCAGGGGAGAGGCCCTTTGGTGGTTAAGTCTGTTGCCGCCACCATGCTGGTCGTCTTTGCCTCAGCTCTTTACAATGCGACGAAAATCGGCCGACGAACGGCGGAGGGCGGCTTCATCAACCAGACTGACGAGATTCTCATGGCGCAGCGCCTTCTCGAAGCCTCCATGATCGGTGAGCTTTAA

mRNA sequence

ATGATTCAAGTTGTGTTGAAGCTTGCATTGAGCGAAATGGCCATAATTTTGGCTCTGTTGTTCAGAACTCCATTCAGAAATTTGATAGTCAAAGGATTGGACAGATTGAAGCAGGGGAGAGGCCCTTTGGTGGTTAAGTCTGTTGCCGCCACCATGCTGGTCGTCTTTGCCTCAGCTCTTTACAATGCGACGAAAATCGGCCGACGAACGGCGGAGGGCGGCTTCATCAACCAGACTGACGAGATTCTCATGGCGCAGCGCCTTCTCGAAGCCTCCATGATCGGTGAGCTTTAA

Coding sequence (CDS)

ATGATTCAAGTTGTGTTGAAGCTTGCATTGAGCGAAATGGCCATAATTTTGGCTCTGTTGTTCAGAACTCCATTCAGAAATTTGATAGTCAAAGGATTGGACAGATTGAAGCAGGGGAGAGGCCCTTTGGTGGTTAAGTCTGTTGCCGCCACCATGCTGGTCGTCTTTGCCTCAGCTCTTTACAATGCGACGAAAATCGGCCGACGAACGGCGGAGGGCGGCTTCATCAACCAGACTGACGAGATTCTCATGGCGCAGCGCCTTCTCGAAGCCTCCATGATCGGTGAGCTTTAA

Protein sequence

MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASALYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIGEL

Homology

[Close]

BLAST of HG10022221 vs. NCBI nr
Match: KAA0034840.1 (putative bcr-associated protein, bap [Cucumis melo var. makuwa] >TYK16868.1 putative bcr-associated protein, bap [Cucumis melo var. makuwa])

HSP 1 Score: 143.7 bits (361), Expect = 8.5e-31
Identity = 80/97 (82.47%), Postives = 84/97 (86.60%), Query Frame = 0


Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          MIQVVLKL L+EMA+ILALLF+ P RNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL
Sbjct: 1  MIQVVLKLVLAEMALILALLFKNPLRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMIGEL 98
          YNA  I  R AEGG +NQTDEILMA RLLE   IGEL
Sbjct: 61 YNAAAIRGRMAEGGILNQTDEILMAYRLLETYTIGEL 97

[Close]

BLAST of HG10022221 vs. NCBI nr
Match: XP_022954156.1 (uncharacterized protein LOC111456500 isoform X1 [Cucurbita moschata])

HSP 1 Score: 140.6 bits (353), Expect = 7.2e-30
Identity = 74/95 (77.89%), Postives = 84/95 (88.42%), Query Frame = 0


Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          MI+VV  L L+EMA+IL LLFRTPFR LI+ GLDRLKQGRGPLVVK+VAATMLV+FAS L
Sbjct: 1  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVKTVAATMLVLFASTL 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG 96
          YNA +I RRTAE GF++QTDE+LMA RLLEASMIG
Sbjct: 61 YNAAEIHRRTAEAGFLSQTDEVLMAHRLLEASMIG 95

[Close]

BLAST of HG10022221 vs. NCBI nr
Match: KAG7033051.1 (hypothetical protein SDJN02_07104 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 139.4 bits (350), Expect = 1.6e-29
Identity = 73/95 (76.84%), Postives = 84/95 (88.42%), Query Frame = 0


Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          MI+VV  L L+EMA+IL LLFRTPFR LI+ GLDRLKQGRGPLVV++VAATMLV+FAS L
Sbjct: 1  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVRTVAATMLVLFASTL 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG 96
          YNA +I RRTAE GF++QTDE+LMA RLLEASMIG
Sbjct: 61 YNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIG 95

[Close]

BLAST of HG10022221 vs. NCBI nr
Match: XP_031741112.1 (uncharacterized protein LOC101213037 isoform X2 [Cucumis sativus])

HSP 1 Score: 139.4 bits (350), Expect = 1.6e-29
Identity = 76/97 (78.35%), Postives = 82/97 (84.54%), Query Frame = 0


Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          MIQV LKL L+EMA+ILALLF+ P RNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL
Sbjct: 1  MIQVALKLVLAEMALILALLFKNPLRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMIGEL 98
          YNA  I RR AE G +NQTDEIL+A RLLE   IG +
Sbjct: 61 YNAAAINRRVAEAGILNQTDEILVAYRLLETYTIGNM 97

[Close]

BLAST of HG10022221 vs. NCBI nr
Match: XP_022990643.1 (uncharacterized protein LOC111487467 isoform X1 [Cucurbita maxima])

HSP 1 Score: 139.4 bits (350), Expect = 1.6e-29
Identity = 73/95 (76.84%), Postives = 84/95 (88.42%), Query Frame = 0


Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          MI+VV  L L+EMA+IL LLFRTPFR LI+ GLDRLKQGRGPL+VK+VAATMLV+FAS L
Sbjct: 1  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLMVKTVAATMLVLFASTL 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG 96
          YNA +I RRTAE GF++QTDE+LMA RLLEASMIG
Sbjct: 61 YNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIG 95

[Close]

BLAST of HG10022221 vs. ExPASy TrEMBL
Match: A0A5D3D049 (Endoplasmic reticulum transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83970G00010 PE=3 SV=1)

HSP 1 Score: 143.7 bits (361), Expect = 4.1e-31
Identity = 80/97 (82.47%), Postives = 84/97 (86.60%), Query Frame = 0


Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          MIQVVLKL L+EMA+ILALLF+ P RNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL
Sbjct: 1  MIQVVLKLVLAEMALILALLFKNPLRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMIGEL 98
          YNA  I  R AEGG +NQTDEILMA RLLE   IGEL
Sbjct: 61 YNAAAIRGRMAEGGILNQTDEILMAYRLLETYTIGEL 97

[Close]

BLAST of HG10022221 vs. ExPASy TrEMBL
Match: A0A6J1GQ35 (Endoplasmic reticulum transmembrane protein OS=Cucurbita moschata OX=3662 GN=LOC111456500 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.5e-30
Identity = 74/95 (77.89%), Postives = 84/95 (88.42%), Query Frame = 0


Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          MI+VV  L L+EMA+IL LLFRTPFR LI+ GLDRLKQGRGPLVVK+VAATMLV+FAS L
Sbjct: 1  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLVVKTVAATMLVLFASTL 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG 96
          YNA +I RRTAE GF++QTDE+LMA RLLEASMIG
Sbjct: 61 YNAAEIHRRTAEAGFLSQTDEVLMAHRLLEASMIG 95

[Close]

BLAST of HG10022221 vs. ExPASy TrEMBL
Match: A0A6J1JTW1 (Endoplasmic reticulum transmembrane protein OS=Cucurbita maxima OX=3661 GN=LOC111487467 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 7.8e-30
Identity = 73/95 (76.84%), Postives = 84/95 (88.42%), Query Frame = 0


Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          MI+VV  L L+EMA+IL LLFRTPFR LI+ GLDRLKQGRGPL+VK+VAATMLV+FAS L
Sbjct: 1  MIRVVFNLVLTEMALILVLLFRTPFRKLIISGLDRLKQGRGPLMVKTVAATMLVLFASTL 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG 96
          YNA +I RRTAE GF++QTDE+LMA RLLEASMIG
Sbjct: 61 YNAAEIRRRTAEAGFLSQTDEVLMAHRLLEASMIG 95

[Close]

BLAST of HG10022221 vs. ExPASy TrEMBL
Match: A0A0A0KNS5 (Endoplasmic reticulum transmembrane protein OS=Cucumis sativus OX=3659 GN=Csa_5G515050 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29
Identity = 76/95 (80.00%), Postives = 81/95 (85.26%), Query Frame = 0


Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          MIQV LKL L+EMA+ILALLF+ P RNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL
Sbjct: 1  MIQVALKLVLAEMALILALLFKNPLRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG 96
          YNA  I RR AE G +NQTDEIL+A RLLE   IG
Sbjct: 61 YNAAAINRRVAEAGILNQTDEILVAYRLLETYTIG 95

[Close]

BLAST of HG10022221 vs. ExPASy TrEMBL
Match: A0A1S3C8X1 (Endoplasmic reticulum transmembrane protein OS=Cucumis melo OX=3656 GN=LOC103498158 PE=3 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29
Identity = 77/95 (81.05%), Postives = 81/95 (85.26%), Query Frame = 0


Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          MIQVVLKL L+EMA+ILALLF+ P RNLIVKGLDRLKQGRGPLV KSVAATMLVVFASAL
Sbjct: 1  MIQVVLKLVLAEMALILALLFKNPLRNLIVKGLDRLKQGRGPLVAKSVAATMLVVFASAL 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG 96
          YNA  I  R AEGG +NQTDEILMA RLLE   IG
Sbjct: 61 YNAAAIRGRMAEGGILNQTDEILMAYRLLETYTIG 95

[Close]

BLAST of HG10022221 vs. TAIR 10
Match: AT5G42570.1 (B-cell receptor-associated 31-like )

HSP 1 Score: 90.9 bits (224), Expect = 6.1e-19
Identity = 44/95 (46.32%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          MI ++  +  +EMA+IL LLF+TP R LI+   DR+K+GRGP+VVK++  T+ VV  S++
Sbjct: 1  MIHLLYTVIFAEMALILLLLFKTPLRKLIILTFDRIKRGRGPVVVKTIGTTVFVVLLSSI 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG 96
          Y+   I RR+ +G  +N TD++L ++ LLEAS++G
Sbjct: 61 YSLVNIQRRSEDGAVLNPTDQVLASKHLLEASLMG 95

[Close]

BLAST of HG10022221 vs. TAIR 10
Match: AT1G11905.1 (B-cell receptor-associated protein 31-like )

HSP 1 Score: 87.8 bits (216), Expect = 5.2e-18
Identity = 41/95 (43.16%), Postives = 71/95 (74.74%), Query Frame = 0


Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          M Q++  + L E+ +I+AL F+TP R L++  LDR K+GRGP+V+++V+AT++V+  +++
Sbjct: 1  MQQLLFAVVLFEVVVIMALSFKTPIRKLLIMSLDRSKRGRGPVVIQTVSATVIVLLVTSV 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG 96
          YN   I +R  E G +N TDE++MA+ LLE++++G
Sbjct: 61 YNMMGIQKRWIEDGVVNPTDEVIMAKHLLESTLMG 95

[Close]

BLAST of HG10022221 vs. TAIR 10
Match: AT1G11905.2 (B-cell receptor-associated protein 31-like )

HSP 1 Score: 85.1 bits (209), Expect = 3.4e-17
Identity = 40/94 (42.55%), Postives = 70/94 (74.47%), Query Frame = 0


Query: 1  MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
          M Q++  + L E+ +I+AL F+TP R L++  LDR K+GRGP+V+++V+AT++V+  +++
Sbjct: 1  MQQLLFAVVLFEVVVIMALSFKTPIRKLLIMSLDRSKRGRGPVVIQTVSATVIVLLVTSV 60

Query: 61 YNATKIGRRTAEGGFINQTDEILMAQRLLEASMI 95
          YN   I +R  E G +N TDE++MA+ LLE++++
Sbjct: 61 YNMMGIQKRWIEDGVVNPTDEVIMAKHLLESTLM 94

[Close]

BLAST of HG10022221 vs. TAIR 10
Match: AT3G20450.1 (B-cell receptor-associated protein 31-like )

HSP 1 Score: 81.6 bits (200), Expect = 3.7e-16
Identity = 46/96 (47.92%), Postives = 64/96 (66.67%), Query Frame = 0


Query: 1   MIQVVLKLALSEMAIILALLFRTPFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASAL 60
           M Q++  +   E  +IL L F TP R ++VK LD  KQGR PLV K+VAATMLV+F S +
Sbjct: 5   MFQLLFTIVTIEAVLILTLGFGTPARRVVVKLLDLSKQGRAPLVAKTVAATMLVLFGSVM 64

Query: 61  YNATKIGRRTAE-GGFINQTDEILMAQRLLEASMIG 96
           ++  +I  R +E GG  N TD+++ A RLLEA ++G
Sbjct: 65  FSTIQIHTRVSESGGVANSTDQVMFANRLLEAFLMG 100

[Close]

BLAST of HG10022221 vs. TAIR 10
Match: AT5G48660.1 (B-cell receptor-associated protein 31-like )

HSP 1 Score: 65.5 bits (158), Expect = 2.7e-11
Identity = 38/96 (39.58%), Postives = 59/96 (61.46%), Query Frame = 0


Query: 1  MIQVVLKLALSEMAIILALLFRT-PFRNLIVKGLDRLKQGRGPLVVKSVAATMLVVFASA 60
          MIQ++  +   E AI   LL +  P R L++K LD++K G+GP  VK++A TM V+  S 
Sbjct: 1  MIQLLFLVLFVEGAIAFLLLIKIGPLRELVIKSLDQMKMGKGPATVKTIAGTMSVILFSN 60

Query: 61 LYNATKIGRRTAEGGFINQTDEILMAQRLLEASMIG 96
          L +  KI  + A+ G ++  D++L    LLEAS++G
Sbjct: 61 LMSIVKIQNKGAKLGTMSPMDQVLWRTHLLEASLLG 96

The following BLAST results are available for this feature:

BLAST of HG10022221 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034840.1	8.5e-31	82.47	putative bcr-associated protein, bap [Cucumis melo var. makuwa] >TYK16868.1 puta...	[more]
XP_022954156.1	7.2e-30	77.89	uncharacterized protein LOC111456500 isoform X1 [Cucurbita moschata]	[more]
KAG7033051.1	1.6e-29	76.84	hypothetical protein SDJN02_07104 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_031741112.1	1.6e-29	78.35	uncharacterized protein LOC101213037 isoform X2 [Cucumis sativus]	[more]
XP_022990643.1	1.6e-29	76.84	uncharacterized protein LOC111487467 isoform X1 [Cucurbita maxima]	[more]

BLAST of HG10022221 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10022221 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D049	4.1e-31	82.47	Endoplasmic reticulum transmembrane protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1GQ35	3.5e-30	77.89	Endoplasmic reticulum transmembrane protein OS=Cucurbita moschata OX=3662 GN=LOC...	[more]
A0A6J1JTW1	7.8e-30	76.84	Endoplasmic reticulum transmembrane protein OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A0A0KNS5	1.3e-29	80.00	Endoplasmic reticulum transmembrane protein OS=Cucumis sativus OX=3659 GN=Csa_5G...	[more]
A0A1S3C8X1	1.3e-29	81.05	Endoplasmic reticulum transmembrane protein OS=Cucumis melo OX=3656 GN=LOC103498...	[more]

BLAST of HG10022221 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G42570.1	6.1e-19	46.32	B-cell receptor-associated 31-like	[more]
AT1G11905.1	5.2e-18	43.16	B-cell receptor-associated protein 31-like	[more]
AT1G11905.2	3.4e-17	42.55	B-cell receptor-associated protein 31-like	[more]
AT3G20450.1	3.7e-16	47.92	B-cell receptor-associated protein 31-like	[more]
AT5G48660.1	2.7e-11	39.58	B-cell receptor-associated protein 31-like	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008417	B-cell receptor-associated protein 29/31	PANTHER	PTHR12701	BCR-ASSOCIATED PROTEIN, BAP	coord: 1..95
None	No IPR available	PANTHER	PTHR12701:SF48	B-CELL RECEPTOR-ASSOCIATED-LIKE PROTEIN	coord: 1..95

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10022221.1	HG10022221.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0070973	protein localization to endoplasmic reticulum exit site
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005783	endoplasmic reticulum