
HG10022192 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCCGCCAATTGGTTCTCCTTGCTCTTCTCTTCACCGCCGTCGTCGGCATTGTCTCCGCCGCCGAGGCTCCCACCGCCTCCCCTGCTTCCTCACCTAAGGCTGATGGCGTTGAAACCTCCGATGCCGAATCTCCCGCAGCTGCTCCTTCCAAGTCTCCCATCGCCGCCGCCGCCGCCCCAATCGCCGCCACTCCCACTGCCGCCGATGCCCCAAAAGGAGCTGCTTCTTCCCCTAAGGCTGAAGCCCCTGCTGCCGGTGGCCCTGCTTCTGCCCCTGCTGGCGATGAGTCTTCTGCTGAGTCCCCCGCTGGAGCCCCCGAATCCGACGCGGATGTGTCATCTCCACCTTCCCCAACCGGACCTGCTGCCGGACCCGTCAGCGATGGCGAAGCTACTGCTGATGCACCCGCTGATTCACCCACTGATGCTAAGGCCAATGGAGCTTCTTTCCTTAAAGTGTCGGTTGCCGCCGTTGCTGGGATGTCAGCCGTTGCTGGATTCTTTGCCTTCTAA ATGGCCCGCCAATTGGTTCTCCTTGCTCTTCTCTTCACCGCCGTCGTCGGCATTGTCTCCGCCGCCGAGGCTCCCACCGCCTCCCCTGCTTCCTCACCTAAGGCTGATGGCGTTGAAACCTCCGATGCCGAATCTCCCGCAGCTGCTCCTTCCAAGTCTCCCATCGCCGCCGCCGCCGCCCCAATCGCCGCCACTCCCACTGCCGCCGATGCCCCAAAAGGAGCTGCTTCTTCCCCTAAGGCTGAAGCCCCTGCTGCCGGTGGCCCTGCTTCTGCCCCTGCTGGCGATGAGTCTTCTGCTGAGTCCCCCGCTGGAGCCCCCGAATCCGACGCGGATGTGTCATCTCCACCTTCCCCAACCGGACCTGCTGCCGGACCCGTCAGCGATGGCGAAGCTACTGCTGATGCACCCGCTGATTCACCCACTGATGCTAAGGCCAATGGAGCTTCTTTCCTTAAAGTGTCGGTTGCCGCCGTTGCTGGGATGTCAGCCGTTGCTGGATTCTTTGCCTTCTAA ATGGCCCGCCAATTGGTTCTCCTTGCTCTTCTCTTCACCGCCGTCGTCGGCATTGTCTCCGCCGCCGAGGCTCCCACCGCCTCCCCTGCTTCCTCACCTAAGGCTGATGGCGTTGAAACCTCCGATGCCGAATCTCCCGCAGCTGCTCCTTCCAAGTCTCCCATCGCCGCCGCCGCCGCCCCAATCGCCGCCACTCCCACTGCCGCCGATGCCCCAAAAGGAGCTGCTTCTTCCCCTAAGGCTGAAGCCCCTGCTGCCGGTGGCCCTGCTTCTGCCCCTGCTGGCGATGAGTCTTCTGCTGAGTCCCCCGCTGGAGCCCCCGAATCCGACGCGGATGTGTCATCTCCACCTTCCCCAACCGGACCTGCTGCCGGACCCGTCAGCGATGGCGAAGCTACTGCTGATGCACCCGCTGATTCACCCACTGATGCTAAGGCCAATGGAGCTTCTTTCCTTAAAGTGTCGGTTGCCGCCGTTGCTGGGATGTCAGCCGTTGCTGGATTCTTTGCCTTCTAA MARQLVLLALLFTAVVGIVSAAEAPTASPASSPKADGVETSDAESPAAAPSKSPIAAAAAPIAATPTAADAPKGAASSPKAEAPAAGGPASAPAGDESSAESPAGAPESDADVSSPPSPTGPAAGPVSDGEATADAPADSPTDAKANGASFLKVSVAAVAGMSAVAGFFAF Homology
BLAST of HG10022192 vs. NCBI nr
Match: XP_038889219.1 (classical arabinogalactan protein 11 [Benincasa hispida]) HSP 1 Score: 212.2 bits (539), Expect = 3.4e-51 Identity = 149/178 (83.71%), Postives = 157/178 (88.20%), Query Frame = 0
BLAST of HG10022192 vs. NCBI nr
Match: XP_031741751.1 (lysine-rich arabinogalactan protein 17 [Cucumis sativus]) HSP 1 Score: 161.4 bits (407), Expect = 7.0e-36 Identity = 128/195 (65.64%), Postives = 148/195 (75.90%), Query Frame = 0
BLAST of HG10022192 vs. NCBI nr
Match: XP_008458926.1 (PREDICTED: skin secretory protein xP2 [Cucumis melo]) HSP 1 Score: 160.2 bits (404), Expect = 1.6e-35 Identity = 127/190 (66.84%), Postives = 146/190 (76.84%), Query Frame = 0
BLAST of HG10022192 vs. NCBI nr
Match: TYK09358.1 (skin secretory protein xP2 [Cucumis melo var. makuwa]) HSP 1 Score: 124.8 bits (312), Expect = 7.2e-25 Identity = 96/150 (64.00%), Postives = 112/150 (74.67%), Query Frame = 0
BLAST of HG10022192 vs. NCBI nr
Match: XP_022133599.1 (brain acid soluble protein 1 [Momordica charantia]) HSP 1 Score: 124.4 bits (311), Expect = 9.4e-25 Identity = 116/200 (58.00%), Postives = 141/200 (70.50%), Query Frame = 0
BLAST of HG10022192 vs. ExPASy Swiss-Prot
Match: Q9LY91 (Classical arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=AGP6 PE=2 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 5.4e-07 Identity = 73/172 (42.44%), Postives = 94/172 (54.65%), Query Frame = 0
BLAST of HG10022192 vs. ExPASy TrEMBL
Match: A0A1S3CA92 (skin secretory protein xP2 OS=Cucumis melo OX=3656 GN=LOC103498187 PE=4 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 7.5e-36 Identity = 127/190 (66.84%), Postives = 146/190 (76.84%), Query Frame = 0
BLAST of HG10022192 vs. ExPASy TrEMBL
Match: A0A0A0KUB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517830 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 7.3e-31 Identity = 108/165 (65.45%), Postives = 128/165 (77.58%), Query Frame = 0
BLAST of HG10022192 vs. ExPASy TrEMBL
Match: A0A5D3CDS4 (Skin secretory protein xP2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold249G00550 PE=4 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 3.5e-25 Identity = 96/150 (64.00%), Postives = 112/150 (74.67%), Query Frame = 0
BLAST of HG10022192 vs. ExPASy TrEMBL
Match: A0A6J1BWF7 (brain acid soluble protein 1 OS=Momordica charantia OX=3673 GN=LOC111006138 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 4.6e-25 Identity = 116/200 (58.00%), Postives = 141/200 (70.50%), Query Frame = 0
BLAST of HG10022192 vs. ExPASy TrEMBL
Match: A0A6J1FDY2 (skin secretory protein xP2-like OS=Cucurbita moschata OX=3662 GN=LOC111444655 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 8.9e-21 Identity = 110/225 (48.89%), Postives = 129/225 (57.33%), Query Frame = 0
BLAST of HG10022192 vs. TAIR 10
Match: AT5G14380.1 (arabinogalactan protein 6 ) HSP 1 Score: 55.8 bits (133), Expect = 3.8e-08 Identity = 73/172 (42.44%), Postives = 94/172 (54.65%), Query Frame = 0
BLAST of HG10022192 vs. TAIR 10
Match: AT3G01700.1 (arabinogalactan protein 11 ) HSP 1 Score: 42.7 bits (99), Expect = 3.4e-04 Identity = 69/172 (40.12%), Postives = 93/172 (54.07%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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