HG10022107 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10022107
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Ribosomal RNA small subunit methyltransferase D
Location	Chr05: 20909253 .. 20916319 (+)
RNA-Seq Expression	HG10022107
Synteny	HG10022107

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTTCTTCGTTCCCGATTCTTTCTTCATTGAGCGCCAGCGTAAATATCTCTTCGGATGTTAGCTCCTTTTTGCTGAATATTCCATTCGTCAATATCTGTTCCAAACCGAGCACTCATCCGTCGTCATCTGTTATCGTTTGCTCGTACAGTGAGTTCCGTTTGCTCGTACAGTGAGTTCCTGTATCTTGTTGTATCCATTATTTGCTGTAATTGAACTTTCAATTGTGTATTGGTTTCAGAATCTGGCAACGATACAGTGACGGAGCGGAAGAAAAAGTTGTTGGAGCAATATGGACTTGATCCTAACGAGTTTTTGTCTGAACCTTCCACTAATGTTGGTTCTCCCTCTCTCTGATGGTTGTTATCTAAAATTTCTTTTCAAGAATGAATAGCTTGGAGATGAGTGACTGACATTGTATTATTCTTTGCTGTTTCAATTTTTGCAATTACACTGTATTGGCTACGTAATTGAGTGTTTGGATACTTGGCAATGCTTAATTTTATTCATTGTAATCGTTACTTTGCCTTATAGCGAAGAAGAGAAATGCGAAAAACGGGAAAAGGCAAGCATATTTCAGCCGAGGATCCTAAACCTCAACGGCAGACTCATAAGTTACTTCAGGTACGAGTTGTGTTCCTTTTTCCATTTCATTCAATTCAGTCTACCCTTGGAAGTGAAAGTTACAATCATTCGCGGGCCTAACTGGGCGCTACTATCCACTATATATCTTCCAAAGTAGAGAAGGCATCCGTCAGAGGGGATATCGCTCTCTGCCATAGAGAGTACTCCTTCAAAATTTCGAAATGAAGTGAAAAGGGAGAGAAATGCTTGTGTAATTTGATATTTAAGGTCTTTTGGTAATAGAACTTTTCTTACATGGTGGTTGAACAAATGCTTTATTTGGATTGAAGACATTCCTTCTTAAATATCAATTTACAGAAATTGAAAGCTATAGTATTAGTTTAGTTCTGTAAGTTGATTGAATAATCTCATTTTGGATTTATTCCAGTCATATCTACACCAAGCGAATCATTTTCAATTGGCCAATTTGCCACATTGAAAACTAAAATACTAATTTTAGTCTTGAGAGAATATTGCGTCTGTTGCTAGAATTTATCACGTTGACGATACCCATGGATCCTCCAATGCCTACACATCACGTGTGCCACAGATATATGGAAAGTATATTAAAAAGATTCCTTGTTTTTCTTTCAAAAACAACTCAACGAATATGTTGGCTAACTCAGGTGCTTGGAGGAAGTGCTCGGAGAATGAAGCTACTCTCACCAAAGGGCTTGGATGTACGACCAATGATGGAAGTTGTGAAAGGTGCAGCTTTTGATATTTTGCAGGTTGGAGTTGTAGTTTAAATGTTAGTTTCTTTCACGTTACCAGATCATTTGGCTAACTTATCATATGATTCAGGGTTTGTAGATTTCTAGTTCAAGAGCTCATTTGGTAGCAAAACATTTTATATAGTCGTACTTTTCTTGGATAGGTTGCTGGTAGCCATCCTGTCACAGAAAAAAAAAGGTCTAATGTAATTTGAAAATGCAGGCTGCTGGTGGATGTCCAGCATCCTTAAGGCCTGGTCGTTGGTTAGACTTGTATAGTGGTACTGGATCAGTTGGTATTGAAGCTATGAGCCGTGGATGTTCCGAGGTACCAGTTCAATTGTGAATTTAGTTTGGGATAACATTTTCCATAATTTTTAAAAATAACTAACTGATTAAAGCTTTCGAACTAACTATGTTTAGATAGTGATTGGCTTGATATACGAAATTATCAATTTCATGATATTTATTCTCTATATCTCTTTTTCTTTTTCTCCTTCATATAATATCTGCTCCTTCAACTTCCAGGTGCATTTTGTCGAGATGGATCCATGGGTTGTTTCTGATGTTCTAAGGCCAAATTTGGAATGTACTGGGTTTTTTGATGATTCAGTCATTCACACAATTCGGGTTGAGAATTTTATAGAACGAGCTGAGCAACTTATTGGTATCCCATCTAAACTTTAGTTTTCTTCTTGTTTCATCCTAAGACTTATGGGCACAAAATGGACACGGGGTAAATTGTTTCTAACAAACTAAGGGTTAGTTTGGGATTGTTGTAGCTTTTAAAATATTTGTTGGCACTTGTGATTTGTGTCTGTGAGACAAATCAACCATGACATGAAGTAATTTAGTGTTTGGAAAATATCAATTAAAAAACTTAAAAAACATATTTTATTGTGTTTGGTAAATTATTGTTAAATTGTTTTGATTTAGCTGTAGTGACCACATTAGACATATTATTTTAATCATTTTTATATTGACATTTAATATATAGTGTATTATAAGATAAATATGTAAAAGTTTATATGATTTAAATTAGGAGTAATGTTGTTTAATTTACATTATTTGATAAAATTTGAGAAAAACAATTTTTATAAAAAATTGAAGCAATCAAATTTTGTTGATTCTGGAAGGAATAGATTTGAAAAGAAAAACAATATATGAAAGCGTACAATTGAACTTTTAAAATTTGTTAGAGAAGATATGAAAGTTTTAGAAAATTTTATTTCAAAAGTTACTATCTACGTGATTTTGCAGATAGAGTAAATTGAGAAGTGATTTTGGATAAATGATTAAATAATCAAATTTACCAAACAACTTAATTAAACTTGCATTAACTGTAAATGAAATGGTAAATGTAAATGGTCTACGCTTATCTCACCTTGGTATGAATAAAGAATCAATAAAATCAAACAAAGTCTCATTTTTGTTTAAGAATAATAAATGGTAATGGAACCAATTTCTTATGGTATAGTTCAATTGAATGTGTAAGCTTCTATAATTTATGATTTTAAGAGTACCAATTATTGTGTCAAGTATATTGTCTTGTCTAGGTAATGACAGACCATTTGATTACATTAGTGTTACTCCACCGTACGCACAAGTTGATTATGGGGTACTCATGGGGCAACTATCAAAGTCAGCCTTAGTTGGAGAAGATACCTTCATTGTAAGTTGTATTTTTCTTGTTCCTATTTAAAAAGCCAAATCTTCTTCATGTAAAACCTGTTTTATTTAGATTAGGATGATCGTACGGGTTCATAAAACTGTACGCTATGGCTCGCATCCGTAGTCAATCCTATATTTATTTGCATATGGTTTACCTTCCTTTCTCTCACTTTGATCTTTGTGATCTAGGTGGTTGAATATCCATTAAGGACTGATATGCTGGATTCCTGTGGATGCCTTATTAAGGTAATTTAATCATGCAGGTATTTTACATTCTTAATGTTATGAATGAATAAAATCATTAATTGGACAAAATATTATTTCATCTGAAATTTGTTTAGGCTGATGGAATTTAGTGAGAAGGTATGGGTATGGATCCTGGGCAACTCTATCTTTTGTAATTGGGGGTCAAGTTGAATGTAGTCACACCCTGAGTGATTTCTCAACAAGGCACTTGAAAAATATATATACAAGAAGTGATCAATGGTCTGATATGTTACAAATTCCTGCAGTTGCTTTCTTTGTAATTTTTTTTATGTCTGGACATAGGATCATCATTTAAAGAGAATTATTTAGGTTTTGCCTCATAATATCTTTCCCTAATGAGTAACAAGTATAATTGTATCTAATTGCAGATTACTGACCGACGGTTTGGTCGGACACACTTGGCAATTTATGGACCCAAGTGGGCTGAGAAGAAAAAAAAGGAAAAAAATTAAAATTACTTGATGAAGTTTCTATAACTGCCGAGTGGTATTAGCTGGTGACATTGTTCGGCAACAATTGTTAACAGCCTAAACTCAAGTGGTGGGGAGGCAACTTTAAAGAGCTGCATGCTTTTTTCATCAAAAAACGTAAAAGAGCTGCAGGCTTTAAAGTATTACCATCGTTCCATTTTGTTGGTAACTAGGAATTGAAGTATCCAGATGTACTTTTCTTGATTCTATTGGCATCTTGCAAGTACAGGGTTCCCAACTATTGCAGGTGAAGGCTGTGTATGTAATCTACAGCCGCCTGCATTGTCTAGCTCTAGAGTTTATATCCAAGCTTCATGATGGCAAGACTTAAAGTTAACAAGGCAGACAGTGCACCACCTTTTTCTTTTTTTCTTTCCTCAGGTCTAAATTGATGAGTACTATGTACTTGTACTTGAGCAGTTGCCAAGTAGGTTTGCCCTCAATGAGCGAAAGCATAATATGTAGAAGATTGTATTGAAACTCAAATATCTTTTATTGACCTCTTTGGTTGATTCCAGCATTAAAGTGCCAGTATGACTATTCAGAATCATGCATTTTACGGACTTGTTGATCTCCAAGTTTACCCTAGCCATTCTTGTGCTACTTTATCTATTCCAAACTTCTGTTTTACTCAACCAATAGGAATCTTATCATATCTTATTTGATTTTTCAAAAGTTCTTAGGTTTTATTTGCCTTTGCTTAGCAATAAAAATTAGAATCCTACACGTGGGGTGGACTTAAAGTCTCCACTGTAGGTCAATAGGCGCAGGACATATCTCTTTGGCTCCTGCAGGTTGCAGTTTAACAGAGAAACCAAGCTGAGTGAGACAGACATCATGGAAATTACAGTCTTATAAAGGAAAAGAATTCGAAGGGATAGTGGTAAGCCATGCTGATATCTCACATATGATATTCATATGCCAGAGGAAATACATTGGGGTTTGATTAAGGATGCTGTTCGGATCGACAAGTCCTTCGCCAACCTGCTTATTTTGGACACAATTCTAAATGGGAAAGTTCTGTACTGTTATAACTAAATGGGTTTTAAACATGTGTTTGCCACATGCTAGTAGGAACACTTAGTAAATTTTTTCCAATTACATTATGGCCGTATTTTCTTTTATCATATTCTCTTCATTTTCTGTTTGCCACATGCTAGTAGGAACACCAAGTAATTTTTCTCCAGGATCCTTTTATGGAGTCAATGGATCACGAAGCCCTAATCTTCACATCCATGAACGTTGCGAAGAGTACTAACCATGCAAGGGCCTAGTTTTCTCACGTGATTTATATCCAATTTAGAGTAGTCAGAAGCCTTGTAATCAGACATGGGGAGCTGCTTGCTTCATGATGTTACAAAATACAAAGTAAATGGTTCTTATGGACACGAATTTACTTTGGTTTCTACCAGATACTAGCTTCTCAGTTGAATGGCTTTGATATGGCCTTCAGTATTGCTTTGAGCCAGAGACTGAATCCAATTATCCATCAAGCTCAGTTCACATTGTGTACAGTGGGCTTGGGACAGCGTCCCATCTAAAAAAATTGTATTTTCCCTTTTTTTAATGTTCTCTGATAGCGATGGTTTCCTTCAAATAATTTAATATCTTCATCATTTTTGTGGGCGCTGATGAAATACCAGACATTCAAAATGGACTGCCTCGGTTTCCTTCAGGTTAGCAATCATTTCTTTGATAATTATACAGCATTTGGCCTAATTGGGATTACCACTAAAGCTTCTTCACAAATTTTGGTCTAATATGTGAAGATTTGGCTATGCCTCGTCTTTTACAAACTTGGTGTTAACTGCTAAGTCCTCGTCAGAGTTTATGAGATATTGAGGTCCCCCAATTCCCCTTTTGTAGCTATAGGAAAATGCAGAAACTAAGGCAAGGAAAGAGGAGCTGTTGGACACATTATTCCACAATAAAGTGACATAAATAACTACTTTTCTGTGTTTTAAATCAGATTCCTTCTCTCTCTTCCCACGCGAACACAAAGTACAGTTTCACTCATACAGTCTTTAAATACAAACAAAACAGCCTTACAACCCGCCAAGACCTCAGCCAACCCAATTAGCTTTCCATCTCTCTTCTTTCTTCTTTCTTAGTCCATAGCTATCCCTCTTCCCTTCCATACCCTGAAATGTCTGATTTTAGTCATTTCTGTGTTTCTGTTCTGAATGGATGATGACCTTGTTGGTCGGTTGGAAGCTGTGAGATAAGGAAAAGGGTTTTGGCCTTTGGGTGTAATGGCGAGTAACTGTAGTTTTTTGAAGTCTCTGTTTGGAGCTTTTCTCTTTCTTGGTATCATCTGGTTTTCTTTTAGTGGAGTGATTGATAATGCCAGCCCAGCTTCCAGAAGAGCGACAGACATGCAGTGGAAGCTGATTGGAAGAGAGAAGCATGTCTTTCATTGGCATTCTGATTTTTATTCTGTCAGCAAGAGAAGAGTACCAAATGGACCTGATCCAATCCATAACAGGTACTCAATTCTACTTGATCTAATTTACTGTATTTACAGATATGTTTTGCTTATTTTCCTTTTCTCCTGCTCGTTGCAAGTATTGTCTTGAGCCTTTTGTTTTTTTAGTCTCTTTTCCTGTGTTCTAATCTTTTATTTACTTAAGTTGGTTGGTGGGCTTTACAATTTTCTGTGCAATTCTACAAATTTGTGTCCCTAAAAAATGGCAAATTAACGCGTTTGAAGTTGACTGCCCAAAATTCAAGTAGAAGAAAGATAAATGGACTGAGAATTCTATTTCTACTAGTAAATTTATGAAGTGTTACTCCATTGCTTTTATTTCTTCCAATTATCGTTATTAGTTTCCTTATGTACTACAAATTGTAAAGCATGGAACAGAATTCAGCTTCAGACTCGACCATTTGATCATTTTAAAATAGTGTATTGCTCTGCCTCTACGCAGTTTGTTTGCTTTTTCTTTTATTTGGTTGTAGCAATTTGAGTTAGTAAAAGAGATGTGCTGGAAACTACTTCAATTGAGATTTGTTGAAGTTGATGATAGTCTCACTTTTTTTTTTTTGTTCTCAAAAACAAAAAAGAACAAAAGTTCTTTTTTATCACTCTTTCTCTTATTTTTATGAGCTATTAAAGGCATTGGGGCAAGATCTTGACCACTTTAGTTCATAACCTTGAAATTATAGTTAGAGGTTATACATAACATTGTTTCTCTTTGCTACAAAACCATTGCAGACATGATAAATTCTCTCTCTATGACATTGACTAATGAATTTCATTGCTCAAAATGTGAATTCAGGAGAGTAGAGAATTCTAAACAACCACCAATTCGAGCCTAA

mRNA sequence

ATGGCGGTTTCTTCGTTCCCGATTCTTTCTTCATTGAGCGCCAGCGTAAATATCTCTTCGGATGTTAGCTCCTTTTTGCTGAATATTCCATTCGTCAATATCTGTTCCAAACCGAGCACTCATCCGTCGTCATCTGTTATCGTTTGCTCGTACAAATCTGGCAACGATACAGTGACGGAGCGGAAGAAAAAGTTGTTGGAGCAATATGGACTTGATCCTAACGAGTTTTTGTCTGAACCTTCCACTAATCGAAGAAGAGAAATGCGAAAAACGGGAAAAGGCAAGCATATTTCAGCCGAGGATCCTAAACCTCAACGGCAGACTCATAAGTTACTTCAGGTGCTTGGAGGAAGTGCTCGGAGAATGAAGCTACTCTCACCAAAGGGCTTGGATGTACGACCAATGATGGAAGTTGTGAAAGGTGCAGCTTTTGATATTTTGCAGGCTGCTGGTGGATGTCCAGCATCCTTAAGGCCTGGTCGTTGGTTAGACTTGTATAGTGGTACTGGATCAGTTGGTATTGAAGCTATGAGCCGTGGATGTTCCGAGGTGCATTTTGTCGAGATGGATCCATGGGTTGTTTCTGATGTTCTAAGGCCAAATTTGGAATGTACTGGGTTTTTTGATGATTCAGTCATTCACACAATTCGGGTTGAGAATTTTATAGAACGAGCTGAGCAACTTATTGGTAATGACAGACCATTTGATTACATTAGTGTTACTCCACCGTACGCACAAGTTGATTATGGGGTACTCATGGGGCAACTATCAAAGTCAGCCTTAGTTGGAGAAGATACCTTCATTGTGGTTGAATATCCATTAAGGACTGATATGCTGGATTCCTGTGGATGCCTTATTAAGGAATTGAAGTATCCAGATGTACTTTTCTTGATTCTATTGGCATCTTGCAAGTACAGGGTTCCCAACTATTGCAGGAGAGTAGAGAATTCTAAACAACCACCAATTCGAGCCTAA

Coding sequence (CDS)

ATGGCGGTTTCTTCGTTCCCGATTCTTTCTTCATTGAGCGCCAGCGTAAATATCTCTTCGGATGTTAGCTCCTTTTTGCTGAATATTCCATTCGTCAATATCTGTTCCAAACCGAGCACTCATCCGTCGTCATCTGTTATCGTTTGCTCGTACAAATCTGGCAACGATACAGTGACGGAGCGGAAGAAAAAGTTGTTGGAGCAATATGGACTTGATCCTAACGAGTTTTTGTCTGAACCTTCCACTAATCGAAGAAGAGAAATGCGAAAAACGGGAAAAGGCAAGCATATTTCAGCCGAGGATCCTAAACCTCAACGGCAGACTCATAAGTTACTTCAGGTGCTTGGAGGAAGTGCTCGGAGAATGAAGCTACTCTCACCAAAGGGCTTGGATGTACGACCAATGATGGAAGTTGTGAAAGGTGCAGCTTTTGATATTTTGCAGGCTGCTGGTGGATGTCCAGCATCCTTAAGGCCTGGTCGTTGGTTAGACTTGTATAGTGGTACTGGATCAGTTGGTATTGAAGCTATGAGCCGTGGATGTTCCGAGGTGCATTTTGTCGAGATGGATCCATGGGTTGTTTCTGATGTTCTAAGGCCAAATTTGGAATGTACTGGGTTTTTTGATGATTCAGTCATTCACACAATTCGGGTTGAGAATTTTATAGAACGAGCTGAGCAACTTATTGGTAATGACAGACCATTTGATTACATTAGTGTTACTCCACCGTACGCACAAGTTGATTATGGGGTACTCATGGGGCAACTATCAAAGTCAGCCTTAGTTGGAGAAGATACCTTCATTGTGGTTGAATATCCATTAAGGACTGATATGCTGGATTCCTGTGGATGCCTTATTAAGGAATTGAAGTATCCAGATGTACTTTTCTTGATTCTATTGGCATCTTGCAAGTACAGGGTTCCCAACTATTGCAGGAGAGTAGAGAATTCTAAACAACCACCAATTCGAGCCTAA

Protein sequence

MAVSSFPILSSLSASVNISSDVSSFLLNIPFVNICSKPSTHPSSSVIVCSYKSGNDTVTERKKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKHISAEDPKPQRQTHKLLQVLGGSARRMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRGCSEVHFVEMDPWVVSDVLRPNLECTGFFDDSVIHTIRVENFIERAEQLIGNDRPFDYISVTPPYAQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLDSCGCLIKELKYPDVLFLILLASCKYRVPNYCRRVENSKQPPIRA

Homology

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BLAST of HG10022107 vs. NCBI nr
Match: XP_038890433.1 (putative rRNA methyltransferase YlbH [Benincasa hispida])

HSP 1 Score: 542.7 bits (1397), Expect = 2.1e-150
Identity = 270/287 (94.08%), Postives = 279/287 (97.21%), Query Frame = 0


Query: 1   MAVSSFPILSSLSASVNISSDVSSFLLNIPFVNICSKPSTHPSSSVIVCSYKSGNDTVTE 60
           MAVSSFP+LSSLSASV+IS DVSSF LNIP VNICSK +THPSSS+IVCSYKSGN+ VTE
Sbjct: 1   MAVSSFPVLSSLSASVSISPDVSSFSLNIPLVNICSKQTTHPSSSIIVCSYKSGNNAVTE 60

Query: 61  RKKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKHISAEDPKPQRQTHKLLQVLGGSAR 120
           R+K+LLEQYGLDPNEFLSEPSTNRRREMRKTG+GK ISAEDPKPQRQTHKLLQVLGGSAR
Sbjct: 61  RRKRLLEQYGLDPNEFLSEPSTNRRREMRKTGEGKQISAEDPKPQRQTHKLLQVLGGSAR 120

Query: 121 RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG 180
           RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG
Sbjct: 121 RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG 180

Query: 181 CSEVHFVEMDPWVVSDVLRPNLECTGFFDDSVIHTIRVENFIERAEQLIGNDRPFDYISV 240
           CSEVHFVEMDPWVVSDVLRPNLE TGFFDDSVIHTIRVENFI+RAEQLIGNDRPFDYISV
Sbjct: 181 CSEVHFVEMDPWVVSDVLRPNLESTGFFDDSVIHTIRVENFIDRAEQLIGNDRPFDYISV 240

Query: 241 TPPYAQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLDSCGCLIK 288
           TPPY QVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLDSCGCLIK
Sbjct: 241 TPPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLDSCGCLIK 287

[Close]

BLAST of HG10022107 vs. NCBI nr
Match: XP_004148680.1 (uncharacterized protein LOC101209883 [Cucumis sativus] >XP_031741881.1 uncharacterized protein LOC101209883 [Cucumis sativus] >KGN52426.1 hypothetical protein Csa_007850 [Cucumis sativus])

HSP 1 Score: 523.1 bits (1346), Expect = 1.7e-144
Identity = 264/287 (91.99%), Postives = 270/287 (94.08%), Query Frame = 0


Query: 1   MAVSSFPILSSLSASVNISSDVSSFLLNIPFVNICSKPSTHPSSSVIVCSYKSGNDTVTE 60
           MAVSS P+LSSLSAS NI SDV+SF LN P  NICSKPS HPSSS+IVCSYKSGN TVTE
Sbjct: 1   MAVSSLPVLSSLSASANI-SDVTSFSLNSPLSNICSKPSAHPSSSIIVCSYKSGNHTVTE 60

Query: 61  RKKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKHISAEDPKPQRQTHKLLQVLGGSAR 120
           RKKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGK I  EDPKPQRQTHKLLQVLGGSAR
Sbjct: 61  RKKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKQIFPEDPKPQRQTHKLLQVLGGSAR 120

Query: 121 RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG 180
           RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG
Sbjct: 121 RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG 180

Query: 181 CSEVHFVEMDPWVVSDVLRPNLECTGFFDDSVIHTIRVENFIERAEQLIGNDRPFDYISV 240
           CSEVHFVEMDPWVVSDVLRPNLE TGFFD SVIHTIRVENFIERA+QLIG +RPFDYISV
Sbjct: 181 CSEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERPFDYISV 240

Query: 241 TPPYAQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLDSCGCLIK 288
           TPPY QVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDML+SCGCL K
Sbjct: 241 TPPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLESCGCLTK 286

[Close]

BLAST of HG10022107 vs. NCBI nr
Match: XP_008458705.1 (PREDICTED: putative rRNA methyltransferase YlbH [Cucumis melo] >KAA0037420.1 putative rRNA methyltransferase YlbH [Cucumis melo var. makuwa] >TYK00211.1 putative rRNA methyltransferase YlbH [Cucumis melo var. makuwa])

HSP 1 Score: 517.3 bits (1331), Expect = 9.5e-143
Identity = 261/287 (90.94%), Postives = 270/287 (94.08%), Query Frame = 0


Query: 1   MAVSSFPILSSLSASVNISSDVSSFLLNIPFVNICSKPSTHPSSSVIVCSYKSGNDTVTE 60
           MAVSSFP+LSSLSAS NI SDVSSF L+ P +NICSK S+HPSSS+IVCSYKSGN TV E
Sbjct: 1   MAVSSFPVLSSLSASANI-SDVSSFSLSSPLINICSKSSSHPSSSIIVCSYKSGNHTVAE 60

Query: 61  RKKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKHISAEDPKPQRQTHKLLQVLGGSAR 120
           RKKKLLEQYGLDPNEFLSEPSTNRRRE+RKTGKGK IS EDPKPQRQTHKLLQVLGGSAR
Sbjct: 61  RKKKLLEQYGLDPNEFLSEPSTNRRREIRKTGKGKQISLEDPKPQRQTHKLLQVLGGSAR 120

Query: 121 RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG 180
           RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG
Sbjct: 121 RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG 180

Query: 181 CSEVHFVEMDPWVVSDVLRPNLECTGFFDDSVIHTIRVENFIERAEQLIGNDRPFDYISV 240
           CSEVHFVEMDPWVVSDVLRPNLE TGF D SVIHTIRVENFIERA+QLIG + PFDYISV
Sbjct: 181 CSEVHFVEMDPWVVSDVLRPNLESTGFDDVSVIHTIRVENFIERADQLIGTETPFDYISV 240

Query: 241 TPPYAQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLDSCGCLIK 288
           TPPY QVDYGVLMGQLSKSALVGEDTFIVVEYPL+TDMLDSCGCL K
Sbjct: 241 TPPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLKTDMLDSCGCLTK 286

[Close]

BLAST of HG10022107 vs. NCBI nr
Match: XP_022133703.1 (uncharacterized protein LOC111006220 [Momordica charantia])

HSP 1 Score: 504.2 bits (1297), Expect = 8.3e-139
Identity = 252/287 (87.80%), Postives = 267/287 (93.03%), Query Frame = 0


Query: 1   MAVSSFPILSSLSASVNISSDVSSFLLNIPFVNICSKPSTHPSSSVIVCSYKSGNDTVTE 60
           MAVSSFP+LSSLSAS NIS+DVS + LN+P VNICS+ S H SSS IVCSYKSG++ VT+
Sbjct: 1   MAVSSFPVLSSLSASANISADVSLYSLNLPLVNICSRLSAHQSSSTIVCSYKSGSEAVTD 60

Query: 61  RKKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKHISAEDPKPQRQTHKLLQVLGGSAR 120
           R+KKLLEQYGLDP+EFLSEPSTNRRRE+ K+GKGK ISA DPKPQR+THKLLQVLGGSAR
Sbjct: 61  RRKKLLEQYGLDPDEFLSEPSTNRRREVPKSGKGKQISAGDPKPQRETHKLLQVLGGSAR 120

Query: 121 RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG 180
           RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG
Sbjct: 121 RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG 180

Query: 181 CSEVHFVEMDPWVVSDVLRPNLECTGFFDDSVIHTIRVENFIERAEQLIGNDRPFDYISV 240
           CSEVHFVEMDPWVVSDVLRPNLE TGF D SVIHTI VENFIERA+Q IGND PFDYISV
Sbjct: 181 CSEVHFVEMDPWVVSDVLRPNLESTGFLDVSVIHTIPVENFIERAKQFIGNDGPFDYISV 240

Query: 241 TPPYAQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLDSCGCLIK 288
           TPPY QVDYGVLMGQLS SALVGEDTFIVVEYPLRT+MLDSCGCLIK
Sbjct: 241 TPPYTQVDYGVLMGQLSTSALVGEDTFIVVEYPLRTEMLDSCGCLIK 287

[Close]

BLAST of HG10022107 vs. NCBI nr
Match: XP_022993553.1 (uncharacterized protein LOC111489523 isoform X1 [Cucurbita maxima] >XP_022993554.1 uncharacterized protein LOC111489523 isoform X1 [Cucurbita maxima])

HSP 1 Score: 491.5 bits (1264), Expect = 5.6e-135
Identity = 252/293 (86.01%), Postives = 266/293 (90.78%), Query Frame = 0


Query: 1   MAVSSFPILSSLSASVNIS---SDVSSFLLNIPFVNICSKPSTHPSSSVIVCSYKSGNDT 60
           MAVSSFP+LSSL A  NIS    D S F LNIP VNICS+PSTHPSSS IVCSYKS N +
Sbjct: 300 MAVSSFPVLSSLGARSNISVLDRDCSLFSLNIPLVNICSRPSTHPSSSTIVCSYKSEN-S 359

Query: 61  VTERKKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKHISAEDPKPQRQTHKLLQVLGG 120
           V+ER+KKLLEQYGLDP+EFLSEPS NR REMRK+GK K IS +DPK QR+THKLL+VLGG
Sbjct: 360 VSERRKKLLEQYGLDPDEFLSEPSANRAREMRKSGKDKQISGQDPKFQRKTHKLLKVLGG 419

Query: 121 SARRMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAM 180
           SARRM+LLSP GLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAM
Sbjct: 420 SARRMRLLSPIGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAM 479

Query: 181 SRGCSEVHFVEMDPWVVSDVLRPNLECTGFFDDSVIHTIRVENFIERAEQLIGNDRPFDY 240
           SRGCSEVHFVEMDPWVVSDVLRPNLE TGFFDDSVIHTI VENFIERAEQLIGNDRPFDY
Sbjct: 480 SRGCSEVHFVEMDPWVVSDVLRPNLESTGFFDDSVIHTIPVENFIERAEQLIGNDRPFDY 539

Query: 241 ISVTPPYAQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLDSCGCLIKELK 291
           ISVTPPY QVDYGV+M QLSKSALVGEDTFIVVEYPL+TDMLDSCGCLI+  K
Sbjct: 540 ISVTPPYIQVDYGVVMEQLSKSALVGEDTFIVVEYPLKTDMLDSCGCLIQITK 591

[Close]

BLAST of HG10022107 vs. ExPASy Swiss-Prot
Match: O34331 (Putative rRNA methyltransferase YlbH OS=Bacillus subtilis (strain 168) OX=224308 GN=ylbH PE=3 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 3.1e-11
Identity = 47/179 (26.26%), Postives = 85/179 (47.49%), Query Frame = 0


Query: 112 LQVLGGSARRMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGS 171
           ++V+ GS +   L +  G   RP  + VK + F+++            GR LDL++G+G 
Sbjct: 1   MRVISGSKKGRSLKAVAGTSTRPTTDKVKESIFNMI------GPYFDGGRGLDLFAGSGG 60

Query: 172 VGIEAMSRGCSEVHFVEMDPWVVSDVLRPNLECTGFFDDSVIHTIRVENFIERAEQLIGN 231
           +GIEA+SRG     FV+ D   +  V + NL+       + ++    E  +  A +    
Sbjct: 61  LGIEALSRGFEHCIFVDRDFKAIQTV-KSNLKTLELTKHAQVYRNDAERALHAAAK---R 120

Query: 232 DRPFDYISVTPPYAQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLDSCGCLIKELK 291
           +  F  I + PPY +     L+  + +  ++ ED FIV E+    ++ ++ G L+   K
Sbjct: 121 ETGFRGIFLDPPYKEQKLKALLTLIDEYQMLEEDGFIVAEHDREVELPETVGDLVMTRK 169

[Close]

BLAST of HG10022107 vs. ExPASy Swiss-Prot
Match: P0ADY0 (Ribosomal RNA small subunit methyltransferase D OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=rsmD PE=3 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 5.6e-05
Identity = 39/169 (23.08%), Postives = 74/169 (43.79%), Query Frame = 0


Query: 103 KPQRQTHKLLQVLGGSARRMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRW 162
           KP       ++++GG  R  KL  P    +RP  + V+   F+ L         +   + 
Sbjct: 3   KPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPV------IVDAQC 62

Query: 163 LDLYSGTGSVGIEAMSRGCSEVHFVEMDPWVVSDVLRPNLECTGFFDDSVIHTIRVENFI 222
           LD ++G+G++G+EA+SR  +    +EMD   VS  L  NL      +  V+++  +    
Sbjct: 63  LDCFAGSGALGLEALSRYAAGATLIEMDR-AVSQQLIKNLATLKAGNARVVNSNAMSFLA 122

Query: 223 ERAEQLIGNDRPFDYISVTPPYAQVDYGVLMGQLSKSALVGEDTFIVVE 272
           ++         P + + V PP+ +      +  L  +  + ++  I VE
Sbjct: 123 QKG-------TPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVE 157

[Close]

BLAST of HG10022107 vs. ExPASy Swiss-Prot
Match: P0ADX9 (Ribosomal RNA small subunit methyltransferase D OS=Escherichia coli (strain K12) OX=83333 GN=rsmD PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 5.6e-05
Identity = 39/169 (23.08%), Postives = 74/169 (43.79%), Query Frame = 0


Query: 103 KPQRQTHKLLQVLGGSARRMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRW 162
           KP       ++++GG  R  KL  P    +RP  + V+   F+ L         +   + 
Sbjct: 3   KPNHSGSGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPV------IVDAQC 62

Query: 163 LDLYSGTGSVGIEAMSRGCSEVHFVEMDPWVVSDVLRPNLECTGFFDDSVIHTIRVENFI 222
           LD ++G+G++G+EA+SR  +    +EMD   VS  L  NL      +  V+++  +    
Sbjct: 63  LDCFAGSGALGLEALSRYAAGATLIEMDR-AVSQQLIKNLATLKAGNARVVNSNAMSFLA 122

Query: 223 ERAEQLIGNDRPFDYISVTPPYAQVDYGVLMGQLSKSALVGEDTFIVVE 272
           ++         P + + V PP+ +      +  L  +  + ++  I VE
Sbjct: 123 QKG-------TPHNIVFVDPPFRRGLLEETINLLEDNGWLADEALIYVE 157

[Close]

BLAST of HG10022107 vs. ExPASy Swiss-Prot
Match: P44869 (Ribosomal RNA small subunit methyltransferase D OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=rsmD PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 8.1e-04
Identity = 36/127 (28.35%), Postives = 67/127 (52.76%), Query Frame = 0


Query: 120 RRMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSR 179
           R++ +L+ +GL  RP  + VK   F+ L         +     LD ++G+GS+G EA+SR
Sbjct: 23  RKLPVLNSEGL--RPTGDRVKETLFNWLM------PYIHQSECLDGFAGSGSLGFEALSR 82

Query: 180 GCSEVHFVEMDPWVVSDVLRPNLECTGFFDD--SVIHTIRVENFIERAEQLIGNDRPFDY 239
              +V F+E+D   V++ L+ NL+      +   VI+   ++ F+++ +    N   FD 
Sbjct: 83  QAKKVTFLELDK-TVANQLKKNLQTLKCSSEQAEVINQSSLD-FLKQPQ----NQPHFDV 135

Query: 240 ISVTPPY 245
           + + PP+
Sbjct: 143 VFLDPPF 135

[Close]

BLAST of HG10022107 vs. ExPASy TrEMBL
Match: A0A0A0KX89 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633240 PE=4 SV=1)

HSP 1 Score: 523.1 bits (1346), Expect = 8.4e-145
Identity = 264/287 (91.99%), Postives = 270/287 (94.08%), Query Frame = 0


Query: 1   MAVSSFPILSSLSASVNISSDVSSFLLNIPFVNICSKPSTHPSSSVIVCSYKSGNDTVTE 60
           MAVSS P+LSSLSAS NI SDV+SF LN P  NICSKPS HPSSS+IVCSYKSGN TVTE
Sbjct: 1   MAVSSLPVLSSLSASANI-SDVTSFSLNSPLSNICSKPSAHPSSSIIVCSYKSGNHTVTE 60

Query: 61  RKKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKHISAEDPKPQRQTHKLLQVLGGSAR 120
           RKKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGK I  EDPKPQRQTHKLLQVLGGSAR
Sbjct: 61  RKKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKQIFPEDPKPQRQTHKLLQVLGGSAR 120

Query: 121 RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG 180
           RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG
Sbjct: 121 RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG 180

Query: 181 CSEVHFVEMDPWVVSDVLRPNLECTGFFDDSVIHTIRVENFIERAEQLIGNDRPFDYISV 240
           CSEVHFVEMDPWVVSDVLRPNLE TGFFD SVIHTIRVENFIERA+QLIG +RPFDYISV
Sbjct: 181 CSEVHFVEMDPWVVSDVLRPNLESTGFFDVSVIHTIRVENFIERADQLIGTERPFDYISV 240

Query: 241 TPPYAQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLDSCGCLIK 288
           TPPY QVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDML+SCGCL K
Sbjct: 241 TPPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLESCGCLTK 286

[Close]

BLAST of HG10022107 vs. ExPASy TrEMBL
Match: A0A5D3BK68 (Putative rRNA methyltransferase YlbH OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1582G00020 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 4.6e-143
Identity = 261/287 (90.94%), Postives = 270/287 (94.08%), Query Frame = 0


Query: 1   MAVSSFPILSSLSASVNISSDVSSFLLNIPFVNICSKPSTHPSSSVIVCSYKSGNDTVTE 60
           MAVSSFP+LSSLSAS NI SDVSSF L+ P +NICSK S+HPSSS+IVCSYKSGN TV E
Sbjct: 1   MAVSSFPVLSSLSASANI-SDVSSFSLSSPLINICSKSSSHPSSSIIVCSYKSGNHTVAE 60

Query: 61  RKKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKHISAEDPKPQRQTHKLLQVLGGSAR 120
           RKKKLLEQYGLDPNEFLSEPSTNRRRE+RKTGKGK IS EDPKPQRQTHKLLQVLGGSAR
Sbjct: 61  RKKKLLEQYGLDPNEFLSEPSTNRRREIRKTGKGKQISLEDPKPQRQTHKLLQVLGGSAR 120

Query: 121 RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG 180
           RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG
Sbjct: 121 RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG 180

Query: 181 CSEVHFVEMDPWVVSDVLRPNLECTGFFDDSVIHTIRVENFIERAEQLIGNDRPFDYISV 240
           CSEVHFVEMDPWVVSDVLRPNLE TGF D SVIHTIRVENFIERA+QLIG + PFDYISV
Sbjct: 181 CSEVHFVEMDPWVVSDVLRPNLESTGFDDVSVIHTIRVENFIERADQLIGTETPFDYISV 240

Query: 241 TPPYAQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLDSCGCLIK 288
           TPPY QVDYGVLMGQLSKSALVGEDTFIVVEYPL+TDMLDSCGCL K
Sbjct: 241 TPPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLKTDMLDSCGCLTK 286

[Close]

BLAST of HG10022107 vs. ExPASy TrEMBL
Match: A0A1S3C8K7 (putative rRNA methyltransferase YlbH OS=Cucumis melo OX=3656 GN=LOC103498032 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 4.6e-143
Identity = 261/287 (90.94%), Postives = 270/287 (94.08%), Query Frame = 0


Query: 1   MAVSSFPILSSLSASVNISSDVSSFLLNIPFVNICSKPSTHPSSSVIVCSYKSGNDTVTE 60
           MAVSSFP+LSSLSAS NI SDVSSF L+ P +NICSK S+HPSSS+IVCSYKSGN TV E
Sbjct: 1   MAVSSFPVLSSLSASANI-SDVSSFSLSSPLINICSKSSSHPSSSIIVCSYKSGNHTVAE 60

Query: 61  RKKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKHISAEDPKPQRQTHKLLQVLGGSAR 120
           RKKKLLEQYGLDPNEFLSEPSTNRRRE+RKTGKGK IS EDPKPQRQTHKLLQVLGGSAR
Sbjct: 61  RKKKLLEQYGLDPNEFLSEPSTNRRREIRKTGKGKQISLEDPKPQRQTHKLLQVLGGSAR 120

Query: 121 RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG 180
           RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG
Sbjct: 121 RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG 180

Query: 181 CSEVHFVEMDPWVVSDVLRPNLECTGFFDDSVIHTIRVENFIERAEQLIGNDRPFDYISV 240
           CSEVHFVEMDPWVVSDVLRPNLE TGF D SVIHTIRVENFIERA+QLIG + PFDYISV
Sbjct: 181 CSEVHFVEMDPWVVSDVLRPNLESTGFDDVSVIHTIRVENFIERADQLIGTETPFDYISV 240

Query: 241 TPPYAQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLDSCGCLIK 288
           TPPY QVDYGVLMGQLSKSALVGEDTFIVVEYPL+TDMLDSCGCL K
Sbjct: 241 TPPYTQVDYGVLMGQLSKSALVGEDTFIVVEYPLKTDMLDSCGCLTK 286

[Close]

BLAST of HG10022107 vs. ExPASy TrEMBL
Match: A0A6J1BZW0 (uncharacterized protein LOC111006220 OS=Momordica charantia OX=3673 GN=LOC111006220 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 4.0e-139
Identity = 252/287 (87.80%), Postives = 267/287 (93.03%), Query Frame = 0


Query: 1   MAVSSFPILSSLSASVNISSDVSSFLLNIPFVNICSKPSTHPSSSVIVCSYKSGNDTVTE 60
           MAVSSFP+LSSLSAS NIS+DVS + LN+P VNICS+ S H SSS IVCSYKSG++ VT+
Sbjct: 1   MAVSSFPVLSSLSASANISADVSLYSLNLPLVNICSRLSAHQSSSTIVCSYKSGSEAVTD 60

Query: 61  RKKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKHISAEDPKPQRQTHKLLQVLGGSAR 120
           R+KKLLEQYGLDP+EFLSEPSTNRRRE+ K+GKGK ISA DPKPQR+THKLLQVLGGSAR
Sbjct: 61  RRKKLLEQYGLDPDEFLSEPSTNRRREVPKSGKGKQISAGDPKPQRETHKLLQVLGGSAR 120

Query: 121 RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG 180
           RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG
Sbjct: 121 RMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMSRG 180

Query: 181 CSEVHFVEMDPWVVSDVLRPNLECTGFFDDSVIHTIRVENFIERAEQLIGNDRPFDYISV 240
           CSEVHFVEMDPWVVSDVLRPNLE TGF D SVIHTI VENFIERA+Q IGND PFDYISV
Sbjct: 181 CSEVHFVEMDPWVVSDVLRPNLESTGFLDVSVIHTIPVENFIERAKQFIGNDGPFDYISV 240

Query: 241 TPPYAQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLDSCGCLIK 288
           TPPY QVDYGVLMGQLS SALVGEDTFIVVEYPLRT+MLDSCGCLIK
Sbjct: 241 TPPYTQVDYGVLMGQLSTSALVGEDTFIVVEYPLRTEMLDSCGCLIK 287

[Close]

BLAST of HG10022107 vs. ExPASy TrEMBL
Match: A0A6J1K2L1 (uncharacterized protein LOC111489523 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489523 PE=4 SV=1)

HSP 1 Score: 491.5 bits (1264), Expect = 2.7e-135
Identity = 252/293 (86.01%), Postives = 266/293 (90.78%), Query Frame = 0


Query: 1   MAVSSFPILSSLSASVNIS---SDVSSFLLNIPFVNICSKPSTHPSSSVIVCSYKSGNDT 60
           MAVSSFP+LSSL A  NIS    D S F LNIP VNICS+PSTHPSSS IVCSYKS N +
Sbjct: 300 MAVSSFPVLSSLGARSNISVLDRDCSLFSLNIPLVNICSRPSTHPSSSTIVCSYKSEN-S 359

Query: 61  VTERKKKLLEQYGLDPNEFLSEPSTNRRREMRKTGKGKHISAEDPKPQRQTHKLLQVLGG 120
           V+ER+KKLLEQYGLDP+EFLSEPS NR REMRK+GK K IS +DPK QR+THKLL+VLGG
Sbjct: 360 VSERRKKLLEQYGLDPDEFLSEPSANRAREMRKSGKDKQISGQDPKFQRKTHKLLKVLGG 419

Query: 121 SARRMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAM 180
           SARRM+LLSP GLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAM
Sbjct: 420 SARRMRLLSPIGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAM 479

Query: 181 SRGCSEVHFVEMDPWVVSDVLRPNLECTGFFDDSVIHTIRVENFIERAEQLIGNDRPFDY 240
           SRGCSEVHFVEMDPWVVSDVLRPNLE TGFFDDSVIHTI VENFIERAEQLIGNDRPFDY
Sbjct: 480 SRGCSEVHFVEMDPWVVSDVLRPNLESTGFFDDSVIHTIPVENFIERAEQLIGNDRPFDY 539

Query: 241 ISVTPPYAQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLDSCGCLIKELK 291
           ISVTPPY QVDYGV+M QLSKSALVGEDTFIVVEYPL+TDMLDSCGCLI+  K
Sbjct: 540 ISVTPPYIQVDYGVVMEQLSKSALVGEDTFIVVEYPLKTDMLDSCGCLIQITK 591

[Close]

BLAST of HG10022107 vs. TAIR 10
Match: AT3G28460.1 (methyltransferases )

HSP 1 Score: 318.5 bits (815), Expect = 6.0e-87
Identity = 175/289 (60.55%), Postives = 212/289 (73.36%), Query Frame = 0


Query: 3   VSSF-PILSSLSASVNISSDVSSFLLNIPFVNICSKPSTHPSSSVIVCSYK-SGNDTVTE 62
           +SSF P+  ++  + N+    SSF    P +++    +     + +V S K SG    +E
Sbjct: 5   LSSFSPLGINIDMNKNLGVSYSSF----PQIHLFKGSTPLRVRTFVVSSRKNSGTGLASE 64

Query: 63  RKKKLLEQYGLDPN-EFLSEPSTNRRREMRKTGKGKHISAEDPKPQ-RQTHKLLQVLGGS 122
            KK LLE+YG D N +F S+    RR+E + +G+      E    Q R TH+LLQVL G+
Sbjct: 65  DKKLLLERYGYDANDDFGSQSKKARRKEEKMSGRNSQQVEEVVVVQPRTTHRLLQVLAGT 124

Query: 123 ARRMKLLSPKGLDVRPMMEVVKGAAFDILQAAGGCPASLRPGRWLDLYSGTGSVGIEAMS 182
           A+R KLLS KG+DVRPMMEVVKGAAF ILQAAGGCP SLRPGRWLDLYSGTGSVGIEA+S
Sbjct: 125 AKRKKLLSLKGMDVRPMMEVVKGAAFGILQAAGGCPTSLRPGRWLDLYSGTGSVGIEAIS 184

Query: 183 RGCSEVHFVEMDPWVVSDVLRPNLECTGFFDDSVIHTIRVENFIERAEQLIGNDRPFDYI 242
           RGCSE HFVEMDPWVVS+VL+PNLE TGF D SVIHT RVENF+ERA++L+G D  FDYI
Sbjct: 185 RGCSEAHFVEMDPWVVSNVLQPNLEHTGFVDASVIHTARVENFLERADKLVGKDGVFDYI 244

Query: 243 SVTPPYAQVDYGVLMGQLSKSALVGEDTFIVVEYPLRTDMLDSCGCLIK 288
           SVTPPY +VDY VLM Q++KS  +GE+TFI+VEYP RT MLDSCGCL K
Sbjct: 245 SVTPPYMEVDYEVLMDQIAKSPAIGENTFILVEYPSRTTMLDSCGCLEK 289

The following BLAST results are available for this feature:

BLAST of HG10022107 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890433.1	2.1e-150	94.08	putative rRNA methyltransferase YlbH [Benincasa hispida]	[more]
XP_004148680.1	1.7e-144	91.99	uncharacterized protein LOC101209883 [Cucumis sativus] >XP_031741881.1 uncharact...	[more]
XP_008458705.1	9.5e-143	90.94	PREDICTED: putative rRNA methyltransferase YlbH [Cucumis melo] >KAA0037420.1 put...	[more]
XP_022133703.1	8.3e-139	87.80	uncharacterized protein LOC111006220 [Momordica charantia]	[more]
XP_022993553.1	5.6e-135	86.01	uncharacterized protein LOC111489523 isoform X1 [Cucurbita maxima] >XP_022993554...	[more]

BLAST of HG10022107 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O34331	3.1e-11	26.26	Putative rRNA methyltransferase YlbH OS=Bacillus subtilis (strain 168) OX=224308...	[more]
P0ADY0	5.6e-05	23.08	Ribosomal RNA small subunit methyltransferase D OS=Escherichia coli O6:H1 (strai...	[more]
P0ADX9	5.6e-05	23.08	Ribosomal RNA small subunit methyltransferase D OS=Escherichia coli (strain K12)...	[more]
P44869	8.1e-04	28.35	Ribosomal RNA small subunit methyltransferase D OS=Haemophilus influenzae (strai...	[more]

BLAST of HG10022107 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KX89	8.4e-145	91.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633240 PE=4 SV=1	[more]
A0A5D3BK68	4.6e-143	90.94	Putative rRNA methyltransferase YlbH OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3C8K7	4.6e-143	90.94	putative rRNA methyltransferase YlbH OS=Cucumis melo OX=3656 GN=LOC103498032 PE=...	[more]
A0A6J1BZW0	4.0e-139	87.80	uncharacterized protein LOC111006220 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1K2L1	2.7e-135	86.01	uncharacterized protein LOC111489523 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of HG10022107 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G28460.1	6.0e-87	60.55	methyltransferases	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF03602	Cons_hypoth95	coord: 112..286 e-value: 1.1E-40 score: 139.2
None	No IPR available	GENE3D	3.40.50.150	Vaccinia Virus protein VP39	coord: 100..303 e-value: 5.1E-37 score: 129.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..107
None	No IPR available	PANTHER	PTHR43542	METHYLTRANSFERASE	coord: 44..287
IPR029063	S-adenosyl-L-methionine-dependent methyltransferase	SUPERFAMILY	53335	S-adenosyl-L-methionine-dependent methyltransferases	coord: 112..285

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10022107.1	HG10022107.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0008168	methyltransferase activity