HG10022105 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview
NameHG10022105
Typegene
OrganismLagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
DescriptionUnknown protein
LocationChr05: 20893915 .. 20894196 (+)
RNA-Seq ExpressionHG10022105
SyntenyHG10022105
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACATCATTGCAAAGATCATCAATCTCATTCCGGAGGCAAGGCTCGTCCGGCCTCCTTTGGGAGGAGAATGTCCGAGCACTCAAAGCGAAAACTGGTGTTCGAGCCACGGCATCGGCATCTCTGATGAGTCAAGAATTGAACCGTCCGAGGGCGGAGAGAAATGAAACTTCGGAGTCTGGTTTGCCAAATTCATCATCTCCTTCAACTCCTCAAGAAGCCCCTCAAAGCTGCTCTCTTTCTGCTATTTTTGGACGTTGTATGGGCTCTCCTACCATTTAG

mRNA sequence

ATGACATCATTGCAAAGATCATCAATCTCATTCCGGAGGCAAGGCTCGTCCGGCCTCCTTTGGGAGGAGAATGTCCGAGCACTCAAAGCGAAAACTGGTGTTCGAGCCACGGCATCGGCATCTCTGATGAGTCAAGAATTGAACCGTCCGAGGGCGGAGAGAAATGAAACTTCGGAGTCTGGTTTGCCAAATTCATCATCTCCTTCAACTCCTCAAGAAGCCCCTCAAAGCTGCTCTCTTTCTGCTATTTTTGGACGTTGTATGGGCTCTCCTACCATTTAG

Coding sequence (CDS)

ATGACATCATTGCAAAGATCATCAATCTCATTCCGGAGGCAAGGCTCGTCCGGCCTCCTTTGGGAGGAGAATGTCCGAGCACTCAAAGCGAAAACTGGTGTTCGAGCCACGGCATCGGCATCTCTGATGAGTCAAGAATTGAACCGTCCGAGGGCGGAGAGAAATGAAACTTCGGAGTCTGGTTTGCCAAATTCATCATCTCCTTCAACTCCTCAAGAAGCCCCTCAAAGCTGCTCTCTTTCTGCTATTTTTGGACGTTGTATGGGCTCTCCTACCATTTAG

Protein sequence

MTSLQRSSISFRRQGSSGLLWEENVRALKAKTGVRATASASLMSQELNRPRAERNETSESGLPNSSSPSTPQEAPQSCSLSAIFGRCMGSPTI
Homology
BLAST of HG10022105 vs. NCBI nr
Match: KAA0039541.1 (hypothetical protein E6C27_scaffold64G003660 [Cucumis melo var. makuwa] >TYK15294.1 hypothetical protein E5676_scaffold892G00750 [Cucumis melo var. makuwa])

HSP 1 Score: 115.5 bits (288), Expect = 2.4e-22
Identity = 67/93 (72.04%), Postives = 76/93 (81.72%), Query Frame = 0

Query: 1  MTSLQRSSISFRRQGSSGLLWEENVRALKAKTGVRATASASLMSQELNRPRAER-NETSE 60
          MT+LQRSSISFRRQGSSG +WE+NVR L+ KT  RATASAS+MSQELNR R ER +ET +
Sbjct: 1  MTTLQRSSISFRRQGSSGFIWEDNVRVLEPKTSARATASASMMSQELNRSREERADETPK 60

Query: 61 S-GLPNSSSPSTPQE-APQSCSLSAIFGRCMGS 91
          S GL NSSS STP E  PQ CS S++FGRCMGS
Sbjct: 61 SDGLQNSSSTSTPPERTPQKCSFSSVFGRCMGS 93

BLAST of HG10022105 vs. NCBI nr
Match: KGN52429.1 (hypothetical protein Csa_008360 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 2.4e-22
Identity = 65/96 (67.71%), Postives = 78/96 (81.25%), Query Frame = 0

Query: 1  MTSLQRSSISFRRQGSSGLLWEENVRALKAKTGVRATASASLMSQELNRPRAERNETSES 60
          MT+LQRSSISFRRQGSSGL+WE+NVRAL+AKTG RATAS S+MSQEL++   ER+ET +S
Sbjct: 1  MTTLQRSSISFRRQGSSGLIWEDNVRALEAKTGARATASTSVMSQELSQSSGERDETPKS 60

Query: 61 G----LPNSSSPSTPQE--APQSCSLSAIFGRCMGS 91
               + +SSSPSTP E   PQ CS S++FGRCMGS
Sbjct: 61 DGLDEVNSSSSPSTPPERTTPQKCSFSSVFGRCMGS 96

BLAST of HG10022105 vs. NCBI nr
Match: PRQ57542.1 (hypothetical protein RchiOBHm_Chr1g0349451 [Rosa chinensis])

HSP 1 Score: 71.2 bits (173), Expect = 5.2e-09
Identity = 48/101 (47.52%), Postives = 65/101 (64.36%), Query Frame = 0

Query: 1   MTSLQRSSISFRRQGSSGLLWEENVRALKAKTG-VRATASASLMSQELNR---PRAERNE 60
           MTSL+RSS+SFRRQGSSG +WE+ ++ ++ K+G  +A  S    + E  R    R +   
Sbjct: 1   MTSLRRSSMSFRRQGSSGRIWEDRLQIVEHKSGHAQAIFSGDKSNDEDLRNLDGRFQDRR 60

Query: 61  TSESGLPNSSSPSTP-----QEAPQSCSLSAIFGRCMGSPT 93
             + G P+S S STP     Q+A Q C+LS+IFGRCMGSPT
Sbjct: 61  HVDLGSPSSPSTSTPNSKQEQKAAQRCALSSIFGRCMGSPT 101

BLAST of HG10022105 vs. NCBI nr
Match: CAB4275102.1 (unnamed protein product [Prunus armeniaca] >CAB4305488.1 unnamed protein product [Prunus armeniaca])

HSP 1 Score: 69.3 bits (168), Expect = 2.0e-08
Identity = 45/98 (45.92%), Postives = 60/98 (61.22%), Query Frame = 0

Query: 1  MTSLQRSSISFRRQGSSGLLWEENVRALKAKTGVRATASASLM-SQE----LNRPRAERN 60
          M +L RSSISFRRQGSSGL+WE+ V+ L+ K  ++ T S +   SQE    L+    ER 
Sbjct: 1  MNALPRSSISFRRQGSSGLIWEDRVQVLEQKRALQVTISINKSDSQEHTSNLDERFQERK 60

Query: 61 ETSESG--LPNSSSPSTPQEAPQSCSLSAIFGRCMGSP 92
          +       LP +S PS P++  + CS S +FGRCM SP
Sbjct: 61 DVDSPSPPLPETSVPSKPEKEDRRCSFSTLFGRCMRSP 98

BLAST of HG10022105 vs. NCBI nr
Match: TQD82243.1 (hypothetical protein C1H46_032215 [Malus baccata])

HSP 1 Score: 67.4 bits (163), Expect = 7.4e-08
Identity = 39/95 (41.05%), Postives = 55/95 (57.89%), Query Frame = 0

Query: 1  MTSLQRSSISFRRQGSSGLLWEENVRALKAKTGVRATASASLMSQE----LNRPRAERNE 60
          MT+LQRS+ SFRRQGSSGL+WE+ ++ L+ K  ++   S +    E    L+    ER +
Sbjct: 1  MTALQRSATSFRRQGSSGLIWEDKIQVLEKKPALKVAISMNKTDGEAHPNLDEGFRERKD 60

Query: 61 TSESGLPNSSSPSTPQEAPQSCSLSAIFGRCMGSP 92
                P+SS  S P++    CSL  +FGRCM  P
Sbjct: 61 ADSHSSPDSSLRSKPEQNVHKCSLCTVFGRCMRPP 95

BLAST of HG10022105 vs. ExPASy TrEMBL
Match: A0A5D3CWI8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00750 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.2e-22
Identity = 67/93 (72.04%), Postives = 76/93 (81.72%), Query Frame = 0

Query: 1  MTSLQRSSISFRRQGSSGLLWEENVRALKAKTGVRATASASLMSQELNRPRAER-NETSE 60
          MT+LQRSSISFRRQGSSG +WE+NVR L+ KT  RATASAS+MSQELNR R ER +ET +
Sbjct: 1  MTTLQRSSISFRRQGSSGFIWEDNVRVLEPKTSARATASASMMSQELNRSREERADETPK 60

Query: 61 S-GLPNSSSPSTPQE-APQSCSLSAIFGRCMGS 91
          S GL NSSS STP E  PQ CS S++FGRCMGS
Sbjct: 61 SDGLQNSSSTSTPPERTPQKCSFSSVFGRCMGS 93

BLAST of HG10022105 vs. ExPASy TrEMBL
Match: A0A0A0KU28 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633270 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.2e-22
Identity = 65/96 (67.71%), Postives = 78/96 (81.25%), Query Frame = 0

Query: 1  MTSLQRSSISFRRQGSSGLLWEENVRALKAKTGVRATASASLMSQELNRPRAERNETSES 60
          MT+LQRSSISFRRQGSSGL+WE+NVRAL+AKTG RATAS S+MSQEL++   ER+ET +S
Sbjct: 1  MTTLQRSSISFRRQGSSGLIWEDNVRALEAKTGARATASTSVMSQELSQSSGERDETPKS 60

Query: 61 G----LPNSSSPSTPQE--APQSCSLSAIFGRCMGS 91
               + +SSSPSTP E   PQ CS S++FGRCMGS
Sbjct: 61 DGLDEVNSSSSPSTPPERTTPQKCSFSSVFGRCMGS 96

BLAST of HG10022105 vs. ExPASy TrEMBL
Match: A0A2N9EKT7 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3270 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 6.6e-10
Identity = 42/94 (44.68%), Postives = 63/94 (67.02%), Query Frame = 0

Query: 1  MTSLQRSSISFRRQGSSGLLWEENVRALKAKTGV--RATASASLMSQELNRPRAERNETS 60
          MT+LQRS++SFRRQGSSGL+W++ ++ L+ K GV   +  S +   ++ +    +R + +
Sbjct: 1  MTTLQRSNVSFRRQGSSGLIWDDRLKVLEQKGGVMNNSNTSTTQKREQEHVQGKKRKQVA 60

Query: 61 ESGLPNSSSPSTPQEAPQSCSLSAIFGRCMGSPT 93
           S  PN SS S P +  + CS SA+FGRC+GSPT
Sbjct: 61 YSNPPNPSS-SRPGKKAKGCSFSALFGRCIGSPT 93

BLAST of HG10022105 vs. ExPASy TrEMBL
Match: A0A2P6SFT9 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0349451 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.5e-09
Identity = 48/101 (47.52%), Postives = 65/101 (64.36%), Query Frame = 0

Query: 1   MTSLQRSSISFRRQGSSGLLWEENVRALKAKTG-VRATASASLMSQELNR---PRAERNE 60
           MTSL+RSS+SFRRQGSSG +WE+ ++ ++ K+G  +A  S    + E  R    R +   
Sbjct: 1   MTSLRRSSMSFRRQGSSGRIWEDRLQIVEHKSGHAQAIFSGDKSNDEDLRNLDGRFQDRR 60

Query: 61  TSESGLPNSSSPSTP-----QEAPQSCSLSAIFGRCMGSPT 93
             + G P+S S STP     Q+A Q C+LS+IFGRCMGSPT
Sbjct: 61  HVDLGSPSSPSTSTPNSKQEQKAAQRCALSSIFGRCMGSPT 101

BLAST of HG10022105 vs. ExPASy TrEMBL
Match: A0A6J5UGS2 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23890 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 9.5e-09
Identity = 45/98 (45.92%), Postives = 60/98 (61.22%), Query Frame = 0

Query: 1  MTSLQRSSISFRRQGSSGLLWEENVRALKAKTGVRATASASLM-SQE----LNRPRAERN 60
          M +L RSSISFRRQGSSGL+WE+ V+ L+ K  ++ T S +   SQE    L+    ER 
Sbjct: 1  MNALPRSSISFRRQGSSGLIWEDRVQVLEQKRALQVTISINKSDSQEHTSNLDERFQERK 60

Query: 61 ETSESG--LPNSSSPSTPQEAPQSCSLSAIFGRCMGSP 92
          +       LP +S PS P++  + CS S +FGRCM SP
Sbjct: 61 DVDSPSPPLPETSVPSKPEKEDRRCSFSTLFGRCMRSP 98

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0039541.12.4e-2272.04hypothetical protein E6C27_scaffold64G003660 [Cucumis melo var. makuwa] >TYK1529... [more]
KGN52429.12.4e-2267.71hypothetical protein Csa_008360 [Cucumis sativus][more]
PRQ57542.15.2e-0947.52hypothetical protein RchiOBHm_Chr1g0349451 [Rosa chinensis][more]
CAB4275102.12.0e-0845.92unnamed protein product [Prunus armeniaca] >CAB4305488.1 unnamed protein product... [more]
TQD82243.17.4e-0841.05hypothetical protein C1H46_032215 [Malus baccata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CWI81.2e-2272.04Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KU281.2e-2267.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633270 PE=4 SV=1[more]
A0A2N9EKT76.6e-1044.68Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3270 PE=4 SV=1[more]
A0A2P6SFT92.5e-0947.52Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0349451 PE=4... [more]
A0A6J5UGS29.5e-0945.92Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS23890 PE=4 S... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031421Protein of unknown function DUF4666PFAMPF15697DUF4666coord: 1..58
e-value: 5.8E-10
score: 39.9
IPR031421Protein of unknown function DUF4666PANTHERPTHR33730OS05G0542732 PROTEIN-RELATEDcoord: 1..92
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..78
NoneNo IPR availablePANTHERPTHR33730:SF21SUBFAMILY NOT NAMEDcoord: 1..92

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
HG10022105.1HG10022105.1mRNA