HG10022084 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10022084
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	binding partner of ACD11 1-like
Location	Chr05: 20644449 .. 20647965 (+)
RNA-Seq Expression	HG10022084
Synteny	HG10022084

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGCCGTATTCTGTTCCGCTAGAGTACGAGCTTAAAGCTACAGAGTTTGATGATGCGGGATTCTCTGCCAACAGAAAACCTCCCAAAGAAGAAGATAAGACTTTATTCCAAACCTATAGCTTCTTCAATCGCTGTCTCTCACACGCTCCAATACAACTTCTTCGTGCTTCACACGCTCCTTTCCAGCGCCTGGAATTAATCCCTCCACAAGCTTCAGTACCATCACCAACCAAACTGATACCAAAAACCAAAAAAATATGTCGGCTTAATTTTCAGGTTTCAGCTCAGCCCCCCCCCCCCCCCCCCCCCCCCCTCCCCCGGCCCCCTCTCCTCTTCTTCTCTCTGAGCTTCAAACAGGTACGCCATCACAAAATTTTCCGTTAACTATTTACCTCTTGTTTTAATTTTCATGTCTTTCATTTCAATTTCTCTGTTTCTATCTCTTCCTTTGATTGTTTTGGCTAATGGGTTTGTTTTAGGTTTCCATTTCAAGATCTGGGTTGTGGATTAACTTTGAGAATCTCTTTAAATTTTTCATCTTTTTGTGTAATGGACTTGCTCTTGCTTGTAATTTCCCCCTTTTCTACATACCCTTTTGCTTAAATGTTCTGGGAATCTCTCATTCTTTCGTTTTTCTTCACTTTTCCCCAATGTTCATATTCTTTCCCTCTAACCAGCTGCATTGCTCTTACCATAGAGACTTAGGTTTATAGTGGATATATAAGAATTCACAATTGTATATATTTATCTTAATCTAGAAGCAACACTTTTGGGATAAGCCTGCAAGTGGTAAATTATAACTTTGGACCATTAATTATTATTATGGATGTCAGAGTCATCATACACCAAGTTGGAACATTCTTGTTTGGGGGTAAAAGGTGCTAAAAAGAAAAGAGAAAAGGCTTATTTTTATGAATATGAAGTGTAGGGTTAATTGGTATTTCAGTTTTCTCTAAACCAGCTGGTGAAAGACTGTTTTGTTTTGTTTTGGTATCAAACTCCCCAGGTATTGTGCTCCAATTCAAGTTTTCAACATAGAAAAAGCTGTGCGAAACAATGTACAGTGGGGATTATACTGCTGAAGTTACAAGCTTATCACCTAAAGCCACAGAGAATGATGTTTATGATTTTTTCTCTCATTGTGGCGCGGTAGAGCACGTAGAAATCCTCAGGTGAATAAAACATAAATCCCCTGGCTTGATCGTTTGTTACAATTTCTAATCAATCATATGTGAACCTATTACCATTAGCTTGTTATGCATAAATTAAGAGCTTTGAAACAATTTATATCTGTATGCTAATGTCTGCTGCCCCCCACCCCATTGGAAAGAACCAGTTTCAGTTTCATCAACTCCGACGAGAAGGGTCTCTGTCTCATCATAGATTTACACCGAATTATGAGATCTTACATAAGAACTTACTGAAGCTTCAATAATCAATAAATAAACTTGAAAGATATGAATTTCATATTCATTATTGCTGTTGTGATTAGTAGTTAAAAGAAGAGTGAACTTTTCAGAAATGCTAAAGAGAGTAAACTGGACTGATGATGAGTCTGCCTATGAATTTAGTATGCTGCAATTTTCAATTAGCTGTAAAACCAAGCTACTTGAAAATGTTTTCTCTTTTGGGATAACAGATCAGGCGATTATGCATGTACTGCTTATGTGACCTTTCGAGATGCTTTTGCCCTGGAAACTGCTATATTGCTTAGTGTAAGTTCTTGAGGATCATTTGATTATGGTTGACTTAAGATGCTTCTGTGCTCCTTCATTTTGTAATCATAAATTTGTGTAGAGTACTTTCCTTTTGTTTCTGCTCGCTTGTATGTGTTTCGATGATGTATGTAAACACACAAATACACTCTTTAGGGTGAGTGTATGTAAACACACAAATACACTCTTTAGGGTGAGTGGATGAGGAGGAGATGACCTTTGCGGAAGGATGACGTGCATAAATCGAGAAATGGTTCAAATTCTAGGCTTGAGAAGTTACCATTTCATTTTTAGAGTCTTTCAATTTCTTGCTTTTAAAGAAAGTTGTGTAGATGCCCTCTTTGTTCCTTTCTTTTTCAACATATTTGAGACTCTTCTGTGCTCTTTCATTTTGCAATGGCTTGCTTCTCTCCTTTTTACTTTATCAATCATAGATTCGTGTAGAGTACTTTCTTTTTGTTTCTGCTAGCTTGCGTGGGGTTCGATGATGTATGTGAACACACAAATACACTCTTTAGGGTGAGTGGATGAGGACGGGATGGCTTTTGCGGAAGGATGATGTGTACAAATCGACAAAATGGTTTGAATCCTAGGTTTGAGACGTTACAATTTCATTTTTGGAGTCTATCAATCTCTTGCTTTTAAAGAAGGTTTTGTACATGCCTCTCTGTTTCTTTTTTTTTCAACATGTTTGAGTTTCTCCAACTTACTCAATATGCAATTACTTAAATTTGCCAGAGTTTGAGGGAAAATCATTTGAATCACTTTCCATTTGTACTTTCTAGCATTCCCATGAGCCATGACTAATGGATATTTGTTCTTGCAATTCTTATGATTCAGTTCATCGTTTAATAATGTCAAATAAGTCTTTCTAAGTTTGAGATGGTCCCTCCTTACATCTTAGGGGCTTGGTTTGAAACTCTGAATCCACATTTCATTTCTTTAAAAGAAAATAAAAAATTATGTGTTCTCTCGAAACAAGCGCCTACACGTAACCATCAAAATTAATTATCTTTAAACATCTCTTTTGATCTTTCATATTGGAGTTCATTTGCTGATTTTGATATTCCAGGGGGCCGAAATCCTAGATCAATGTGTGTTCATATCGCGGTGGGGAACTTACGTAGATGAATCAGACACTTGGAACAGCCATTCACAAATGACCGATGACAATACAAGCTTAATGGTAAGCGTAAATAAATAGGTACTCGTTGTTCAAAGGTATCGACATGTCATAACTCATCCCGAGCCTAGCTACTCGCTAAATCTTGCTTGGTTGGTCTTCTAGTTTGTACACAATATCTTGAATTGATCTCTTTAAGTTTCTTTATGGAAATCAGGTGACAGAAATAATGCATTCTGTTCACACACCAGGGGAGGCTGTAACTATGGCTCAACAAGTTGTGAAAACAATGTTATCAAAGGGATATGTTTTAACCAAAGATGCACTTGTAAAGGCTAAAGCTTTTGATGACTCTTGTCAAGTCTCAGCTACTGCAGCAGCAAAAGTTTATGACCTTAGCAATAGGATTGGACTCACTGAGACAATTCATGCTGGCATGGAAACCGTTAAGTACATTGACGAGAAGTTTCACGTTTCCAATATCACCAGATCCGCAGCAGCGGTAACGGGAACGGCAGCTGTGGTGGCAGTGACGGTAACTGGGAAAGCAGCGATGGCAGCAGGCAATGCTGTAATAAACAGCAGCTACTTTTCAAAGGGTGCGCTTTGGGTTTCGGATATGTTGAGTCGTGCTGCTAAGGCTGCAGCTGAAGTAGGTAAGAATAACAGTAAATGA

mRNA sequence

ATGGTGCCGTATTCTGTTCCGCTAGAGTACGAGCTTAAAGCTACAGAGTTTGATGATGCGGGATTCTCTGCCAACAGAAAACCTCCCAAAGAAGAAGATAAGACTTTATTCCAAACCTATAGCTTCTTCAATCGCTGTCTCTCACACGCTCCAATACAACTTCTTCGTGCTTCACACGCTCCTTTCCAGCGCCTGGAATTAATCCCTCCACAAGCTTCAGTACCATCACCAACCAAACTGATACCAAAAACCAAAAAAATATGTCGGCTTAATTTTCAGGATAACAGATCAGGCGATTATGCATGTACTGCTTATGTGACCTTTCGAGATGCTTTTGCCCTGGAAACTGCTATATTGCTTAGTGGGGCCGAAATCCTAGATCAATGTGTGTTCATATCGCGGTGGGGAACTTACGTAGATGAATCAGACACTTGGAACAGCCATTCACAAATGACCGATGACAATACAAGCTTAATGGTGACAGAAATAATGCATTCTGTTCACACACCAGGGGAGGCTGTAACTATGGCTCAACAAGTTGTGAAAACAATGTTATCAAAGGGATATGTTTTAACCAAAGATGCACTTGTAAAGGCTAAAGCTTTTGATGACTCTTGTCAAGTCTCAGCTACTGCAGCAGCAAAAGTTTATGACCTTAGCAATAGGATTGGACTCACTGAGACAATTCATGCTGGCATGGAAACCGTTAAGTACATTGACGAGAAGTTTCACGTTTCCAATATCACCAGATCCGCAGCAGCGGTAACGGGAACGGCAGCTGTGGTGGCAGTGACGGTAACTGGGAAAGCAGCGATGGCAGCAGGCAATGCTGTAATAAACAGCAGCTACTTTTCAAAGGGTGCGCTTTGGGTTTCGGATATGTTGAGTCGTGCTGCTAAGGCTGCAGCTGAAGTAGGTAAGAATAACAGTAAATGA

Coding sequence (CDS)

ATGGTGCCGTATTCTGTTCCGCTAGAGTACGAGCTTAAAGCTACAGAGTTTGATGATGCGGGATTCTCTGCCAACAGAAAACCTCCCAAAGAAGAAGATAAGACTTTATTCCAAACCTATAGCTTCTTCAATCGCTGTCTCTCACACGCTCCAATACAACTTCTTCGTGCTTCACACGCTCCTTTCCAGCGCCTGGAATTAATCCCTCCACAAGCTTCAGTACCATCACCAACCAAACTGATACCAAAAACCAAAAAAATATGTCGGCTTAATTTTCAGGATAACAGATCAGGCGATTATGCATGTACTGCTTATGTGACCTTTCGAGATGCTTTTGCCCTGGAAACTGCTATATTGCTTAGTGGGGCCGAAATCCTAGATCAATGTGTGTTCATATCGCGGTGGGGAACTTACGTAGATGAATCAGACACTTGGAACAGCCATTCACAAATGACCGATGACAATACAAGCTTAATGGTGACAGAAATAATGCATTCTGTTCACACACCAGGGGAGGCTGTAACTATGGCTCAACAAGTTGTGAAAACAATGTTATCAAAGGGATATGTTTTAACCAAAGATGCACTTGTAAAGGCTAAAGCTTTTGATGACTCTTGTCAAGTCTCAGCTACTGCAGCAGCAAAAGTTTATGACCTTAGCAATAGGATTGGACTCACTGAGACAATTCATGCTGGCATGGAAACCGTTAAGTACATTGACGAGAAGTTTCACGTTTCCAATATCACCAGATCCGCAGCAGCGGTAACGGGAACGGCAGCTGTGGTGGCAGTGACGGTAACTGGGAAAGCAGCGATGGCAGCAGGCAATGCTGTAATAAACAGCAGCTACTTTTCAAAGGGTGCGCTTTGGGTTTCGGATATGTTGAGTCGTGCTGCTAAGGCTGCAGCTGAAGTAGGTAAGAATAACAGTAAATGA

Protein sequence

MVPYSVPLEYELKATEFDDAGFSANRKPPKEEDKTLFQTYSFFNRCLSHAPIQLLRASHAPFQRLELIPPQASVPSPTKLIPKTKKICRLNFQDNRSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLSNRIGLTETIHAGMETVKYIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVINSSYFSKGALWVSDMLSRAAKAAAEVGKNNSK

Homology

[Close]

BLAST of HG10022084 vs. NCBI nr
Match: XP_038890704.1 (binding partner of ACD11 1 [Benincasa hispida] >XP_038890705.1 binding partner of ACD11 1 [Benincasa hispida] >XP_038890706.1 binding partner of ACD11 1 [Benincasa hispida])

HSP 1 Score: 396.0 bits (1016), Expect = 3.1e-106
Identity = 208/216 (96.30%), Postives = 214/216 (99.07%), Query Frame = 0


Query: 96  RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDN 155
           RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGTY+DESDTWNSHS +T+DN
Sbjct: 39  RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGTYIDESDTWNSHSHITNDN 98

Query: 156 TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK 215
           TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK
Sbjct: 99  TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK 158

Query: 216 VYDLSNRIGLTETIHAGMETVKYIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAG 275
           VY+LSNRIGLTETIHAGMETVKYIDEKFHVS+ITRSAAAVTGTAAVVAVTVTGKAAMAAG
Sbjct: 159 VYELSNRIGLTETIHAGMETVKYIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAG 218

Query: 276 NAVINSSYFSKGALWVSDMLSRAAKAAAEVGKNNSK 312
           NAVINSSYF+KGALWVSDMLSRAAKAAAEVG NNSK
Sbjct: 219 NAVINSSYFAKGALWVSDMLSRAAKAAAEVGNNNSK 254

[Close]

BLAST of HG10022084 vs. NCBI nr
Match: KAA0039508.1 (binding partner of ACD11 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 389.4 bits (999), Expect = 2.9e-104
Identity = 206/216 (95.37%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 96  RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDN 155
           RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWG Y+DESDTWNS +QMT+DN
Sbjct: 39  RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDTWNSPAQMTNDN 98

Query: 156 TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK 215
           TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK
Sbjct: 99  TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK 158

Query: 216 VYDLSNRIGLTETIHAGMETVKYIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAG 275
           VY+LSNRIGLTETI+AGMETVKYIDEKFHVS+ITRSAAAVTGTAAVVAVTVTGKAAMAAG
Sbjct: 159 VYELSNRIGLTETINAGMETVKYIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAG 218

Query: 276 NAVINSSYFSKGALWVSDMLSRAAKAAAEVGKNNSK 312
           NAVINSSYFSKGALWVSDMLSRAAKAAAE GKN+SK
Sbjct: 219 NAVINSSYFSKGALWVSDMLSRAAKAAAEAGKNSSK 254

[Close]

BLAST of HG10022084 vs. NCBI nr
Match: XP_008459695.1 (PREDICTED: binding partner of ACD11 1-like [Cucumis melo])

HSP 1 Score: 389.4 bits (999), Expect = 2.9e-104
Identity = 206/216 (95.37%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 96  RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDN 155
           RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWG Y+DESDTWNS +QMT+DN
Sbjct: 35  RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDTWNSPAQMTNDN 94

Query: 156 TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK 215
           TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK
Sbjct: 95  TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK 154

Query: 216 VYDLSNRIGLTETIHAGMETVKYIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAG 275
           VY+LSNRIGLTETI+AGMETVKYIDEKFHVS+ITRSAAAVTGTAAVVAVTVTGKAAMAAG
Sbjct: 155 VYELSNRIGLTETINAGMETVKYIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAG 214

Query: 276 NAVINSSYFSKGALWVSDMLSRAAKAAAEVGKNNSK 312
           NAVINSSYFSKGALWVSDMLSRAAKAAAE GKN+SK
Sbjct: 215 NAVINSSYFSKGALWVSDMLSRAAKAAAEAGKNSSK 250

[Close]

BLAST of HG10022084 vs. NCBI nr
Match: TYK15262.1 (binding partner of ACD11 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 382.1 bits (980), Expect = 4.6e-102
Identity = 202/211 (95.73%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 96  RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDN 155
           RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWG Y+DESDTWNS +QMT+DN
Sbjct: 39  RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDTWNSPAQMTNDN 98

Query: 156 TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK 215
           TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK
Sbjct: 99  TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK 158

Query: 216 VYDLSNRIGLTETIHAGMETVKYIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAG 275
           VY+LSNRIGLTETI+AGMETVKYIDEKFHVS+ITRSAAAVTGTAAVVAVTVTGKAAMAAG
Sbjct: 159 VYELSNRIGLTETINAGMETVKYIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAG 218

Query: 276 NAVINSSYFSKGALWVSDMLSRAAKAAAEVG 307
           NAVINSSYFSKGALWVSDMLSRAAKAAAE G
Sbjct: 219 NAVINSSYFSKGALWVSDMLSRAAKAAAEAG 249

[Close]

BLAST of HG10022084 vs. NCBI nr
Match: XP_004148690.1 (binding partner of ACD11 1 [Cucumis sativus] >XP_031742124.1 binding partner of ACD11 1 [Cucumis sativus] >KAE8648916.1 hypothetical protein Csa_009005 [Cucumis sativus])

HSP 1 Score: 380.2 bits (975), Expect = 1.7e-101
Identity = 201/216 (93.06%), Postives = 211/216 (97.69%), Query Frame = 0


Query: 96  RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDN 155
           RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWG Y+DESD+WNS +QMT+DN
Sbjct: 39  RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDN 98

Query: 156 TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK 215
           TSLM T+IMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK
Sbjct: 99  TSLMATKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK 158

Query: 216 VYDLSNRIGLTETIHAGMETVKYIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAG 275
           VY+LSNRIGLTETI++GMETVKYIDEKFHVS+ITRSAAAVTGTAAVVAVTVTGKAAMAAG
Sbjct: 159 VYELSNRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAG 218

Query: 276 NAVINSSYFSKGALWVSDMLSRAAKAAAEVGKNNSK 312
           NAVINSSYFSKGALWVSDMLSRAAKAAAE GK+ SK
Sbjct: 219 NAVINSSYFSKGALWVSDMLSRAAKAAAEAGKSISK 254

[Close]

BLAST of HG10022084 vs. ExPASy Swiss-Prot
Match: Q9LFD5 (Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.1e-18
Identity = 71/213 (33.33%), Postives = 107/213 (50.23%), Query Frame = 0


Query: 103 TAYVTFRDAFALETAILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMVTE 162
           +AYVTF++    ETA+LLSGA I DQ V I     Y   S     H++        +V +
Sbjct: 43  SAYVTFKETQGAETAVLLSGASIADQSVIIELAPNY---SPPAAPHAETQSSGAESVVQK 102

Query: 163 IMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLSNR 222
                         A+ VV +ML+KG++L KDA+ KAKAFD+    ++TA A V  L  +
Sbjct: 103 --------------AEDVVSSMLAKGFILGKDAVGKAKAFDEKHGFTSTATAGVASLDQK 162

Query: 223 IGLTETIHAGM----ETVKYIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAV 282
           IGL++ + AG     E +K +D+ F V+  T+S  A              +   +AG+AV
Sbjct: 163 IGLSQKLTAGTSLVNEKIKAVDQNFQVTERTKSVYA-----------AAEQTVSSAGSAV 222

Query: 283 INSSYFSKGALWVSDMLSRAAKAAAEVGKNNSK 312
           + + Y   G  W +   +R A+AA EVG+   +
Sbjct: 223 MKNRYVLTGVSWAAGAFNRVAQAAGEVGQKTKE 227

[Close]

BLAST of HG10022084 vs. ExPASy TrEMBL
Match: A0A5A7T9G0 (Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G003300 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 1.4e-104
Identity = 206/216 (95.37%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 96  RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDN 155
           RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWG Y+DESDTWNS +QMT+DN
Sbjct: 39  RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDTWNSPAQMTNDN 98

Query: 156 TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK 215
           TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK
Sbjct: 99  TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK 158

Query: 216 VYDLSNRIGLTETIHAGMETVKYIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAG 275
           VY+LSNRIGLTETI+AGMETVKYIDEKFHVS+ITRSAAAVTGTAAVVAVTVTGKAAMAAG
Sbjct: 159 VYELSNRIGLTETINAGMETVKYIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAG 218

Query: 276 NAVINSSYFSKGALWVSDMLSRAAKAAAEVGKNNSK 312
           NAVINSSYFSKGALWVSDMLSRAAKAAAE GKN+SK
Sbjct: 219 NAVINSSYFSKGALWVSDMLSRAAKAAAEAGKNSSK 254

[Close]

BLAST of HG10022084 vs. ExPASy TrEMBL
Match: A0A1S3CAS6 (binding partner of ACD11 1-like OS=Cucumis melo OX=3656 GN=LOC103498736 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 1.4e-104
Identity = 206/216 (95.37%), Postives = 213/216 (98.61%), Query Frame = 0


Query: 96  RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDN 155
           RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWG Y+DESDTWNS +QMT+DN
Sbjct: 35  RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDTWNSPAQMTNDN 94

Query: 156 TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK 215
           TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK
Sbjct: 95  TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK 154

Query: 216 VYDLSNRIGLTETIHAGMETVKYIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAG 275
           VY+LSNRIGLTETI+AGMETVKYIDEKFHVS+ITRSAAAVTGTAAVVAVTVTGKAAMAAG
Sbjct: 155 VYELSNRIGLTETINAGMETVKYIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAG 214

Query: 276 NAVINSSYFSKGALWVSDMLSRAAKAAAEVGKNNSK 312
           NAVINSSYFSKGALWVSDMLSRAAKAAAE GKN+SK
Sbjct: 215 NAVINSSYFSKGALWVSDMLSRAAKAAAEAGKNSSK 250

[Close]

BLAST of HG10022084 vs. ExPASy TrEMBL
Match: A0A5D3CUV4 (Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00390 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 2.2e-102
Identity = 202/211 (95.73%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 96  RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDN 155
           RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWG Y+DESDTWNS +QMT+DN
Sbjct: 39  RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDTWNSPAQMTNDN 98

Query: 156 TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK 215
           TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK
Sbjct: 99  TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK 158

Query: 216 VYDLSNRIGLTETIHAGMETVKYIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAG 275
           VY+LSNRIGLTETI+AGMETVKYIDEKFHVS+ITRSAAAVTGTAAVVAVTVTGKAAMAAG
Sbjct: 159 VYELSNRIGLTETINAGMETVKYIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAG 218

Query: 276 NAVINSSYFSKGALWVSDMLSRAAKAAAEVG 307
           NAVINSSYFSKGALWVSDMLSRAAKAAAE G
Sbjct: 219 NAVINSSYFSKGALWVSDMLSRAAKAAAEAG 249

[Close]

BLAST of HG10022084 vs. ExPASy TrEMBL
Match: A0A0A0KS66 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G635450 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.9e-102
Identity = 231/331 (69.79%), Postives = 252/331 (76.13%), Query Frame = 0


Query: 2   VPYSVPLEYE-LKATEFDDAGFSANRKPPKEEDKTL---FQT----YSFFNRCLSHAPIQ 61
           VPY V L YE LKAT+      SA   P       L   FQT     S F++     P  
Sbjct: 51  VPYGVALVYESLKATD------SAPPSPAPFFSSFLSLSFQTGVVDISVFSKQTGGTP-- 110

Query: 62  LLRASHAPFQRLELIPPQAS---VPSPTKLIPKTKKICRLNFQDN----------RSGDY 121
            +  S++ FQ  +L     +       T L PK  +    +F  +          RSGDY
Sbjct: 111 QVFCSNSSFQHRKLCETMYNGGYTAEVTSLSPKATENDVYDFFSHCGTVEHVEILRSGDY 170

Query: 122 ACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMV 181
           ACTAYVTFRDAFALETAILLSGAEILDQCVFISRWG Y+DESD+WNS +QMT+DNTSLM 
Sbjct: 171 ACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGAYIDESDSWNSPAQMTNDNTSLMA 230

Query: 182 TEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLS 241
           T+IMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVY+LS
Sbjct: 231 TKIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYELS 290

Query: 242 NRIGLTETIHAGMETVKYIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVIN 301
           NRIGLTETI++GMETVKYIDEKFHVS+ITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVIN
Sbjct: 291 NRIGLTETINSGMETVKYIDEKFHVSDITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVIN 350

Query: 302 SSYFSKGALWVSDMLSRAAKAAAEVGKNNSK 312
           SSYFSKGALWVSDMLSRAAKAAAE GK+ SK
Sbjct: 351 SSYFSKGALWVSDMLSRAAKAAAEAGKSISK 373

[Close]

BLAST of HG10022084 vs. ExPASy TrEMBL
Match: A0A6J1C268 (binding partner of ACD11 1 OS=Momordica charantia OX=3673 GN=LOC111006739 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.8e-99
Identity = 198/216 (91.67%), Postives = 209/216 (96.76%), Query Frame = 0


Query: 96  RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDN 155
           RSG+YACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGTY+DESDT NS S+ TDDN
Sbjct: 39  RSGEYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGTYIDESDTSNSPSRTTDDN 98

Query: 156 TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK 215
           TSLMVT+IMHSV+TPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK
Sbjct: 99  TSLMVTQIMHSVYTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK 158

Query: 216 VYDLSNRIGLTETIHAGMETVKYIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAG 275
           V +LSNRIGLTE IHAGMETVKYIDEKFHVS+ITRSAAAVTGTAAVVAVT+TGKAAMAAG
Sbjct: 159 VSELSNRIGLTEKIHAGMETVKYIDEKFHVSDITRSAAAVTGTAAVVAVTMTGKAAMAAG 218

Query: 276 NAVINSSYFSKGALWVSDMLSRAAKAAAEVGKNNSK 312
           NA++NSSYFSKGALWVSDMLSRAA AAA+VGKN SK
Sbjct: 219 NAMVNSSYFSKGALWVSDMLSRAANAAADVGKNTSK 254

[Close]

BLAST of HG10022084 vs. TAIR 10
Match: AT3G01210.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 201.1 bits (510), Expect = 1.3e-51
Identity = 113/210 (53.81%), Postives = 151/210 (71.90%), Query Frame = 0


Query: 101 ACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMV 160
           A TAYVTFRDA+AL+ A+LLSGA I+DQ V+IS +G Y+ ES+         +++ S+ V
Sbjct: 44  ALTAYVTFRDAYALDMAVLLSGATIVDQTVWISVYGVYLHESNNLRQ-----EEDYSVTV 103

Query: 161 TEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLS 220
           T       +PGEA+T+AQQVV+TML+KGYVL+KDA+ KAKA D+S + S+  A K+ ++S
Sbjct: 104 TRSDAFASSPGEAITVAQQVVQTMLAKGYVLSKDAIGKAKALDESQRFSSLVATKLAEIS 163

Query: 221 NRIGLTETIHAGMETVKYIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVIN 280
           + +GLT+ I + ME V+  DEK+H S+ T+SA  VTGTAAV A T+TGK A AA  +V+N
Sbjct: 164 HYLGLTQNIQSSMELVRSADEKYHFSDFTKSAVLVTGTAAVAAATITGKVAAAAATSVVN 223

Query: 281 SSYFSKGALWVSDMLSRAAKAAAEVGKNNS 311
           S YF+ GALW SD L RAAKAAA +G   S
Sbjct: 224 SRYFANGALWFSDALGRAAKAAAHIGGGGS 248

[Close]

BLAST of HG10022084 vs. TAIR 10
Match: AT1G14340.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 188.0 bits (476), Expect = 1.2e-47
Identity = 109/216 (50.46%), Postives = 144/216 (66.67%), Query Frame = 0


Query: 96  RSGDYACTAYVTFRDAFALETAILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDN 155
           RSG+ ACTAYV F+D+++ ETA+LL+GA ILDQ V I+RWG + +E D WN+ S+  +D 
Sbjct: 40  RSGEQACTAYVMFKDSYSQETAVLLTGATILDQRVCITRWGQHHEEFDFWNATSRGFEDE 99

Query: 156 TSLMVTEIMHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAK 215
           +         S    GEAVT AQ+VVK ML+ G+VL KDAL KAKAFD+S  VSA A A+
Sbjct: 100 SDSQ-HYAQRSEFNAGEAVTKAQEVVKIMLATGFVLGKDALSKAKAFDESHGVSAAAVAR 159

Query: 216 VYDLSNRIGLTETIHAGMETVKYIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAG 275
           V  L  RIGLT+ I  G+E V+  D+++HVS+  +S           AV  TG+ A AA 
Sbjct: 160 VSQLEQRIGLTDKIFTGLEAVRMTDQRYHVSDTAKS-----------AVFATGRTAAAAA 219

Query: 276 NAVINSSYFSKGALWVSDMLSRAAKAAAEVGKNNSK 312
            +V+NSSYFS GALW+S  L RAAKAA+++G   S+
Sbjct: 220 TSVVNSSYFSSGALWLSGALERAAKAASDLGTRGSR 243

[Close]

BLAST of HG10022084 vs. TAIR 10
Match: AT5G46870.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 107.5 bits (267), Expect = 2.0e-23
Identity = 76/208 (36.54%), Postives = 111/208 (53.37%), Query Frame = 0


Query: 104 AYVTFRDAFALETAILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMVTEI 163
           AYVTF+D    ETA+LL+G+ I+D  V ++    Y    D   S   + + N S   T  
Sbjct: 45  AYVTFKDLQGAETAVLLTGSTIVDSSVTVTMSPDYQLPPDALASIESLKESNKSSSPTRE 104

Query: 164 MHSVHTPGEAVTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLSNRI 223
             SV         A+ VV  M+SKG+VL KDA+ KAK+ D+  Q+++TA+A+V     RI
Sbjct: 105 DVSV------FRKAEDVVSGMISKGFVLGKDAIAKAKSLDEKHQLTSTASARVTSFDKRI 164

Query: 224 GLTETIHAG----METVKYIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAVI 283
           G TE I+ G     E VK +D+KF V+  T+S           A+    +    AG+A++
Sbjct: 165 GFTEKINTGTTVVSEKVKEVDQKFQVTEKTKS-----------AIAAAEQTVSNAGSAIM 224

Query: 284 NSSYFSKGALWVSDMLSRAAKAAAEVGK 308
            + Y   GA WV+   +R +KAA EVG+
Sbjct: 225 KNRYVLTGATWVTGAFNRVSKAAEEVGQ 235

[Close]

BLAST of HG10022084 vs. TAIR 10
Match: AT4G17720.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 105.5 bits (262), Expect = 7.7e-23
Identity = 72/209 (34.45%), Postives = 115/209 (55.02%), Query Frame = 0


Query: 104 AYVTFRDAFALETAILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMVTEI 163
           AYVTF+D    ETA+LLSGA I+D  V +S    Y           Q++ +  + +  + 
Sbjct: 45  AYVTFKDLQGAETAVLLSGATIVDSSVIVSMAPDY-----------QLSPEALASLEPKD 104

Query: 164 MHSVHTPGEAV-TMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYDLSNR 223
            +     G++V   A+ VV +ML+KG++L KDA+ KAK+ D+  Q+++TA+AKV     +
Sbjct: 105 SNKSPKAGDSVLRKAEDVVSSMLAKGFILGKDAIAKAKSVDEKHQLTSTASAKVASFDKK 164

Query: 224 IGLTETIHAGM----ETVKYIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAAGNAV 283
           IG T+ I+ G     E V+ +D+K+ VS  T+S           A+    +    AG+A+
Sbjct: 165 IGFTDKINTGTVVVGEKVREVDQKYQVSEKTKS-----------AIAAAEQTVSNAGSAI 224

Query: 284 INSSYFSKGALWVSDMLSRAAKAAAEVGK 308
           + + Y   GA WV+   ++ AKAA EVG+
Sbjct: 225 MKNRYVLTGATWVTGAFNKVAKAAEEVGQ 231

[Close]

BLAST of HG10022084 vs. TAIR 10
Match: AT5G32450.1 (RNA binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-21
Identity = 79/217 (36.41%), Postives = 111/217 (51.15%), Query Frame = 0


Query: 104 AYVTFRDAFALETAILLSGAEILDQCVFISRWGTYVDESDTWNSHSQMTDDNTSLMVTEI 163
           A+VTF D  ALE A+LLSGA I+DQ V I+R   YV   +T     +M D+   L + E 
Sbjct: 46  AFVTFTDPKALEIALLLSGATIVDQIVTITRAENYVQRRET--QEVRMLDNAMPLGLQES 105

Query: 164 MHSVHTPGEA-----VTMAQQVVKTMLSKGYVLTKDALVKAKAFDDSCQVSATAAAKVYD 223
                T  +      V+ AQ VV T+L+KG  L +DA+ KAKAFD+  Q+ A A+AKV  
Sbjct: 106 TTQTKTNMDGNSRAYVSKAQDVVATVLAKGSALGQDAVNKAKAFDEKHQLRANASAKVSS 165

Query: 224 LSNRIGLTETIHAGM----ETVKYIDEKFHVSNITRSAAAVTGTAAVVAVTVTGKAAMAA 283
              R+GLTE +  G+    E VK +D+K  VS+ T           + A+    +     
Sbjct: 166 FDKRVGLTEKLSVGISAVNEKVKSVDQKLQVSDKT-----------MAAIFAAERKLNDT 225

Query: 284 GNAVINSSYFSKGALWVSDMLSRAAKAAAEVGKNNSK 312
           G+AV +S Y + GA W S   S+ A+     G    +
Sbjct: 226 GSAVKSSRYVTAGAAWFSGAFSKVARVGQVAGSKTKE 249

The following BLAST results are available for this feature:

BLAST of HG10022084 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890704.1	3.1e-106	96.30	binding partner of ACD11 1 [Benincasa hispida] >XP_038890705.1 binding partner o...	[more]
KAA0039508.1	2.9e-104	95.37	binding partner of ACD11 1-like [Cucumis melo var. makuwa]	[more]
XP_008459695.1	2.9e-104	95.37	PREDICTED: binding partner of ACD11 1-like [Cucumis melo]	[more]
TYK15262.1	4.6e-102	95.73	binding partner of ACD11 1-like [Cucumis melo var. makuwa]	[more]
XP_004148690.1	1.7e-101	93.06	binding partner of ACD11 1 [Cucumis sativus] >XP_031742124.1 binding partner of ...	[more]

BLAST of HG10022084 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LFD5	1.1e-18	33.33	Binding partner of ACD11 1 OS=Arabidopsis thaliana OX=3702 GN=BPA1 PE=1 SV=1	[more]

BLAST of HG10022084 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7T9G0	1.4e-104	95.37	Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A1S3CAS6	1.4e-104	95.37	binding partner of ACD11 1-like OS=Cucumis melo OX=3656 GN=LOC103498736 PE=4 SV=...	[more]
A0A5D3CUV4	2.2e-102	95.73	Binding partner of ACD11 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]
A0A0A0KS66	2.9e-102	69.79	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G635450 PE=4 SV...	[more]
A0A6J1C268	1.8e-99	91.67	binding partner of ACD11 1 OS=Momordica charantia OX=3673 GN=LOC111006739 PE=4 S...	[more]

BLAST of HG10022084 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01210.1	1.3e-51	53.81	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G14340.1	1.2e-47	50.46	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G46870.1	2.0e-23	36.54	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G17720.1	7.7e-23	34.45	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G32450.1	1.4e-21	36.41	RNA binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR32343	SERINE/ARGININE-RICH SPLICING FACTOR	coord: 95..311
None	No IPR available	PANTHER	PTHR32343:SF16	RNA-BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN	coord: 95..311

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10022084.1	HG10022084.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003723	RNA binding