HG10022049 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10022049
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Protein NUCLEAR FUSION DEFECTIVE 4
Location	Chr05: 20228228 .. 20228671 (-)
RNA-Seq Expression	HG10022049
Synteny	HG10022049

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGTAGCAGCATGGCCGAGCTCCAATGGCGGAATTGGGAGTGGAGAATTGGCCAATTTTGTCCAACAAGTGGTGGTCGGACGGTGGTTTTCTCTTTTTGCTTCGTTCCTTGTAATGACCGGCGCCGGCGGAGTTTATTTGTTCGCTTATTACTCTAGAGACATCAAAACGACGCTCCAATGTGATCAAACGACACTAAACAAAATTGGGTTTTACAAAGATTTGGGATCCAACGTCGGCGTTATTGCCGGACTTATGGCGGAGGTGGCGCCCACTTGGTTCGTTCTTCTCATCGGCGCCGCCTTTAATTTTCTTGGCTACTTTAAGATATGGCAAGCCGTTACCGGAAAAATTGTCCGCCCCACCGTCGCCTACTTTTGCTTTTACATTATGGTTGGAGCTAACTCTCAGAATTTTGCCAATACGGGTAATGCAAATTAA

mRNA sequence

ATGGTTGTAGCAGCATGGCCGAGCTCCAATGGCGGAATTGGGAGTGGAGAATTGGCCAATTTTGTCCAACAAGTGGTGGTCGGACGGTGGTTTTCTCTTTTTGCTTCGTTCCTTGTAATGACCGGCGCCGGCGGAGTTTATTTGTTCGCTTATTACTCTAGAGACATCAAAACGACGCTCCAATGTGATCAAACGACACTAAACAAAATTGGGTTTTACAAAGATTTGGGATCCAACGTCGGCGTTATTGCCGGACTTATGGCGGAGGTGGCGCCCACTTGGTTCGTTCTTCTCATCGGCGCCGCCTTTAATTTTCTTGGCTACTTTAAGATATGGCAAGCCGTTACCGGAAAAATTGTCCGCCCCACCGTCGCCTACTTTTGCTTTTACATTATGGTTGGAGCTAACTCTCAGAATTTTGCCAATACGGGTAATGCAAATTAA

Coding sequence (CDS)

ATGGTTGTAGCAGCATGGCCGAGCTCCAATGGCGGAATTGGGAGTGGAGAATTGGCCAATTTTGTCCAACAAGTGGTGGTCGGACGGTGGTTTTCTCTTTTTGCTTCGTTCCTTGTAATGACCGGCGCCGGCGGAGTTTATTTGTTCGCTTATTACTCTAGAGACATCAAAACGACGCTCCAATGTGATCAAACGACACTAAACAAAATTGGGTTTTACAAAGATTTGGGATCCAACGTCGGCGTTATTGCCGGACTTATGGCGGAGGTGGCGCCCACTTGGTTCGTTCTTCTCATCGGCGCCGCCTTTAATTTTCTTGGCTACTTTAAGATATGGCAAGCCGTTACCGGAAAAATTGTCCGCCCCACCGTCGCCTACTTTTGCTTTTACATTATGGTTGGAGCTAACTCTCAGAATTTTGCCAATACGGGTAATGCAAATTAA

Protein sequence

MVVAAWPSSNGGIGSGELANFVQQVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTLQCDQTTLNKIGFYKDLGSNVGVIAGLMAEVAPTWFVLLIGAAFNFLGYFKIWQAVTGKIVRPTVAYFCFYIMVGANSQNFANTGNAN

Homology

[Close]

BLAST of HG10022049 vs. NCBI nr
Match: XP_008464809.1 (PREDICTED: uncharacterized protein LOC103502605 [Cucumis melo])

HSP 1 Score: 268.5 bits (685), Expect = 3.5e-68
Identity = 130/144 (90.28%), Postives = 138/144 (95.83%), Query Frame = 0


Query: 1   MVVAAWPSSNGGIGSGELANFVQQVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTL 60
           M+VAA   SNGGI SGELA+F+ QVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTL
Sbjct: 1   MIVAAGQRSNGGIRSGELADFIGQVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTL 60

Query: 61  QCDQTTLNKIGFYKDLGSNVGVIAGLMAEVAPTWFVLLIGAAFNFLGYFKIWQAVTGKIV 120
           QCDQTTLN+IGFYKDLGSNVGVIAGL+AEVAPTW VLLIGAAFNF+GYFKIWQAVTGKIV
Sbjct: 61  QCDQTTLNRIGFYKDLGSNVGVIAGLLAEVAPTWLVLLIGAAFNFIGYFKIWQAVTGKIV 120

Query: 121 RPTVAYFCFYIMVGANSQNFANTG 145
           RPTVA+FCFYIM+GANSQNFANTG
Sbjct: 121 RPTVAFFCFYIMIGANSQNFANTG 144

[Close]

BLAST of HG10022049 vs. NCBI nr
Match: KAA0051898.1 (protein NUCLEAR FUSION DEFECTIVE 4 [Cucumis melo var. makuwa] >TYJ99888.1 protein NUCLEAR FUSION DEFECTIVE 4 [Cucumis melo var. makuwa])

HSP 1 Score: 264.2 bits (674), Expect = 6.6e-67
Identity = 128/142 (90.14%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 3   VAAWPSSNGGIGSGELANFVQQVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTLQC 62
           +AA   SNGGI SGELA+F+ QVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTLQC
Sbjct: 28  LAAGQRSNGGIRSGELADFIGQVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTLQC 87

Query: 63  DQTTLNKIGFYKDLGSNVGVIAGLMAEVAPTWFVLLIGAAFNFLGYFKIWQAVTGKIVRP 122
           DQTTLN+IGFYKDLGSNVGVIAGL+AEVAPTW VLLIGAAFNF+GYFKIWQAVTGKIVRP
Sbjct: 88  DQTTLNRIGFYKDLGSNVGVIAGLLAEVAPTWLVLLIGAAFNFIGYFKIWQAVTGKIVRP 147

Query: 123 TVAYFCFYIMVGANSQNFANTG 145
           TVA+FCFYIM+GANSQNFANTG
Sbjct: 148 TVAFFCFYIMIGANSQNFANTG 169

[Close]

BLAST of HG10022049 vs. NCBI nr
Match: KAG6583514.1 (Protein NUCLEAR FUSION DEFECTIVE 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 264.2 bits (674), Expect = 6.6e-67
Identity = 126/144 (87.50%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 1   MVVAAWPSSNGGIGSGELANFVQQVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTL 60
           M+V+A PSSN GIGSGEL +FV+QVV GRWFSLFASFLVM GAGGVYLFAYYSRDIKTTL
Sbjct: 1   MIVSATPSSNAGIGSGELGSFVRQVVAGRWFSLFASFLVMAGAGGVYLFAYYSRDIKTTL 60

Query: 61  QCDQTTLNKIGFYKDLGSNVGVIAGLMAEVAPTWFVLLIGAAFNFLGYFKIWQAVTGKIV 120
           QCDQTTLNKIGFYKDLGSNVG++AGL+AEVAPTW +LLIGAA NF+GYFKIWQ VTGKIV
Sbjct: 61  QCDQTTLNKIGFYKDLGSNVGIVAGLLAEVAPTWVLLLIGAALNFVGYFKIWQGVTGKIV 120

Query: 121 RPTVAYFCFYIMVGANSQNFANTG 145
            PTVAYFCFYIMVGANSQNFANTG
Sbjct: 121 NPTVAYFCFYIMVGANSQNFANTG 144

[Close]

BLAST of HG10022049 vs. NCBI nr
Match: XP_004147303.3 (uncharacterized protein LOC101202941 [Cucumis sativus] >KGN64782.2 hypothetical protein Csa_013229 [Cucumis sativus])

HSP 1 Score: 263.8 bits (673), Expect = 8.6e-67
Identity = 126/144 (87.50%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 1   MVVAAWPSSNGGIGSGELANFVQQVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTL 60
           M+VAA   SNGGIGSGEL +FV+Q+V GRWFSLFASFLVM GAGGVYLFAYYSRDIKTTL
Sbjct: 1   MIVAAGQRSNGGIGSGELCDFVRQMVAGRWFSLFASFLVMAGAGGVYLFAYYSRDIKTTL 60

Query: 61  QCDQTTLNKIGFYKDLGSNVGVIAGLMAEVAPTWFVLLIGAAFNFLGYFKIWQAVTGKIV 120
           QCDQTTLNKIGFYKDLGSNVGV AGL+AEV PTW +LLIGAAFNF+GYFKIWQAVTGKIV
Sbjct: 61  QCDQTTLNKIGFYKDLGSNVGVFAGLLAEVVPTWLLLLIGAAFNFMGYFKIWQAVTGKIV 120

Query: 121 RPTVAYFCFYIMVGANSQNFANTG 145
           RPTVA+FCFYIM+GANSQNFANTG
Sbjct: 121 RPTVAFFCFYIMIGANSQNFANTG 144

[Close]

BLAST of HG10022049 vs. NCBI nr
Match: XP_022964760.1 (uncharacterized protein LOC111464761 [Cucurbita moschata])

HSP 1 Score: 263.8 bits (673), Expect = 8.6e-67
Identity = 126/144 (87.50%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 1   MVVAAWPSSNGGIGSGELANFVQQVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTL 60
           M+V+A PSSN GIGSGEL +FV+QVV GRWFSLFASFLVM GAGGVYLFAYYSRDIKTTL
Sbjct: 1   MIVSATPSSNAGIGSGELGSFVRQVVAGRWFSLFASFLVMAGAGGVYLFAYYSRDIKTTL 60

Query: 61  QCDQTTLNKIGFYKDLGSNVGVIAGLMAEVAPTWFVLLIGAAFNFLGYFKIWQAVTGKIV 120
           QCDQTTLNKIGFYKDLGSNVG++AGL+AEVAPTW +LLIGAA NF+GYFKIWQ VTGKIV
Sbjct: 61  QCDQTTLNKIGFYKDLGSNVGIVAGLLAEVAPTWVLLLIGAALNFVGYFKIWQGVTGKIV 120

Query: 121 RPTVAYFCFYIMVGANSQNFANTG 145
            PTVAYFCFYIMVGANSQNFANTG
Sbjct: 121 SPTVAYFCFYIMVGANSQNFANTG 144

[Close]

BLAST of HG10022049 vs. ExPASy TrEMBL
Match: A0A1S3CMG9 (uncharacterized protein LOC103502605 OS=Cucumis melo OX=3656 GN=LOC103502605 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.7e-68
Identity = 130/144 (90.28%), Postives = 138/144 (95.83%), Query Frame = 0


Query: 1   MVVAAWPSSNGGIGSGELANFVQQVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTL 60
           M+VAA   SNGGI SGELA+F+ QVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTL
Sbjct: 1   MIVAAGQRSNGGIRSGELADFIGQVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTL 60

Query: 61  QCDQTTLNKIGFYKDLGSNVGVIAGLMAEVAPTWFVLLIGAAFNFLGYFKIWQAVTGKIV 120
           QCDQTTLN+IGFYKDLGSNVGVIAGL+AEVAPTW VLLIGAAFNF+GYFKIWQAVTGKIV
Sbjct: 61  QCDQTTLNRIGFYKDLGSNVGVIAGLLAEVAPTWLVLLIGAAFNFIGYFKIWQAVTGKIV 120

Query: 121 RPTVAYFCFYIMVGANSQNFANTG 145
           RPTVA+FCFYIM+GANSQNFANTG
Sbjct: 121 RPTVAFFCFYIMIGANSQNFANTG 144

[Close]

BLAST of HG10022049 vs. ExPASy TrEMBL
Match: A0A5D3BP48 (Protein NUCLEAR FUSION DEFECTIVE 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2042G00080 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 3.2e-67
Identity = 128/142 (90.14%), Postives = 136/142 (95.77%), Query Frame = 0


Query: 3   VAAWPSSNGGIGSGELANFVQQVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTLQC 62
           +AA   SNGGI SGELA+F+ QVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTLQC
Sbjct: 28  LAAGQRSNGGIRSGELADFIGQVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTLQC 87

Query: 63  DQTTLNKIGFYKDLGSNVGVIAGLMAEVAPTWFVLLIGAAFNFLGYFKIWQAVTGKIVRP 122
           DQTTLN+IGFYKDLGSNVGVIAGL+AEVAPTW VLLIGAAFNF+GYFKIWQAVTGKIVRP
Sbjct: 88  DQTTLNRIGFYKDLGSNVGVIAGLLAEVAPTWLVLLIGAAFNFIGYFKIWQAVTGKIVRP 147

Query: 123 TVAYFCFYIMVGANSQNFANTG 145
           TVA+FCFYIM+GANSQNFANTG
Sbjct: 148 TVAFFCFYIMIGANSQNFANTG 169

[Close]

BLAST of HG10022049 vs. ExPASy TrEMBL
Match: A0A6J1HLR3 (uncharacterized protein LOC111464761 OS=Cucurbita moschata OX=3662 GN=LOC111464761 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.1e-67
Identity = 126/144 (87.50%), Postives = 135/144 (93.75%), Query Frame = 0


Query: 1   MVVAAWPSSNGGIGSGELANFVQQVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTL 60
           M+V+A PSSN GIGSGEL +FV+QVV GRWFSLFASFLVM GAGGVYLFAYYSRDIKTTL
Sbjct: 1   MIVSATPSSNAGIGSGELGSFVRQVVAGRWFSLFASFLVMAGAGGVYLFAYYSRDIKTTL 60

Query: 61  QCDQTTLNKIGFYKDLGSNVGVIAGLMAEVAPTWFVLLIGAAFNFLGYFKIWQAVTGKIV 120
           QCDQTTLNKIGFYKDLGSNVG++AGL+AEVAPTW +LLIGAA NF+GYFKIWQ VTGKIV
Sbjct: 61  QCDQTTLNKIGFYKDLGSNVGIVAGLLAEVAPTWVLLLIGAALNFVGYFKIWQGVTGKIV 120

Query: 121 RPTVAYFCFYIMVGANSQNFANTG 145
            PTVAYFCFYIMVGANSQNFANTG
Sbjct: 121 SPTVAYFCFYIMVGANSQNFANTG 144

[Close]

BLAST of HG10022049 vs. ExPASy TrEMBL
Match: A0A6J1I5D1 (uncharacterized protein LOC111469394 OS=Cucurbita maxima OX=3661 GN=LOC111469394 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.1e-66
Identity = 125/144 (86.81%), Postives = 134/144 (93.06%), Query Frame = 0


Query: 1   MVVAAWPSSNGGIGSGELANFVQQVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTL 60
           M+V+A PSSN GIGSGEL +FV+QVV GRWFSLFASFLVM GAGGVYLFAYYS DIKTTL
Sbjct: 1   MIVSATPSSNAGIGSGELGSFVRQVVAGRWFSLFASFLVMAGAGGVYLFAYYSTDIKTTL 60

Query: 61  QCDQTTLNKIGFYKDLGSNVGVIAGLMAEVAPTWFVLLIGAAFNFLGYFKIWQAVTGKIV 120
           QCDQTTLNKIGFYKDLGSNVG++AGL+AEVAPTW +LLIGAA NF+GYFKIWQ VTGKIV
Sbjct: 61  QCDQTTLNKIGFYKDLGSNVGIVAGLLAEVAPTWVLLLIGAALNFVGYFKIWQGVTGKIV 120

Query: 121 RPTVAYFCFYIMVGANSQNFANTG 145
            PTVAYFCFYIMVGANSQNFANTG
Sbjct: 121 SPTVAYFCFYIMVGANSQNFANTG 144

[Close]

BLAST of HG10022049 vs. ExPASy TrEMBL
Match: A0A6J1HYZ1 (uncharacterized protein LOC111469392 OS=Cucurbita maxima OX=3661 GN=LOC111469392 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 2.1e-66
Identity = 125/144 (86.81%), Postives = 134/144 (93.06%), Query Frame = 0


Query: 1   MVVAAWPSSNGGIGSGELANFVQQVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTL 60
           M+V+A PSSN GIGSGEL +FV+QVV GRWFSLFASFLVM GAGGVYLFAYYS DIKTTL
Sbjct: 1   MIVSATPSSNAGIGSGELGSFVRQVVAGRWFSLFASFLVMAGAGGVYLFAYYSTDIKTTL 60

Query: 61  QCDQTTLNKIGFYKDLGSNVGVIAGLMAEVAPTWFVLLIGAAFNFLGYFKIWQAVTGKIV 120
           QCDQTTLNKIGFYKDLGSNVG++AGL+AEVAPTW +LLIGAA NF+GYFKIWQ VTGKIV
Sbjct: 61  QCDQTTLNKIGFYKDLGSNVGIVAGLLAEVAPTWVLLLIGAALNFVGYFKIWQGVTGKIV 120

Query: 121 RPTVAYFCFYIMVGANSQNFANTG 145
            PTVAYFCFYIMVGANSQNFANTG
Sbjct: 121 SPTVAYFCFYIMVGANSQNFANTG 144

[Close]

BLAST of HG10022049 vs. TAIR 10
Match: AT2G28120.1 (Major facilitator superfamily protein )

HSP 1 Score: 175.6 bits (444), Expect = 2.9e-44
Identity = 82/132 (62.12%), Postives = 100/132 (75.76%), Query Frame = 0


Query: 13  IGSGELANFVQQVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTLQCDQTTLNKIGF 72
           +G+ E   F+     GRWF +FASFL+M  AG  YLF  YS+DIK+TL  DQTTLN +GF
Sbjct: 1   MGNDETVRFLIHFFNGRWFMVFASFLIMACAGATYLFGTYSKDIKSTLGYDQTTLNLLGF 60

Query: 73  YKDLGSNVGVIAGLMAEVAPTWFVLLIGAAFNFLGYFKIWQAVTGKIVRPTVAYFCFYIM 132
           +KDLG+NVGV++GL+AEV PTWFVL IG+A NF+GYF IW  VTGK+ +P V   C YI 
Sbjct: 61  FKDLGANVGVLSGLIAEVTPTWFVLTIGSAMNFVGYFMIWLTVTGKVAKPKVWQMCLYIC 120

Query: 133 VGANSQNFANTG 145
           +GANSQNFANTG
Sbjct: 121 IGANSQNFANTG 132

[Close]

BLAST of HG10022049 vs. TAIR 10
Match: AT2G39210.1 (Major facilitator superfamily protein )

HSP 1 Score: 162.9 bits (411), Expect = 1.9e-40
Identity = 76/130 (58.46%), Postives = 94/130 (72.31%), Query Frame = 0


Query: 16  GELANFVQQVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTLQCDQTTLNKIGFYKD 75
           G + +   Q++ GRWF  F S L+M+ AG  Y+F  YS DIK TL  DQTTLN + F+KD
Sbjct: 8   GSMKSLTIQILTGRWFMFFGSLLIMSTAGATYMFGIYSGDIKETLGYDQTTLNLLSFFKD 67

Query: 76  LGSNVGVIAGLMAEVAPTWFVLLIGAAFNFLGYFKIWQAVTGKIVRPTVAYFCFYIMVGA 135
           LG+NVGV+AGL+ EV P WF+LLIGA  NF GYF IW AVT +I +P V + C YI VGA
Sbjct: 68  LGANVGVLAGLLNEVTPPWFILLIGAILNFFGYFMIWLAVTERISKPQVWHMCLYICVGA 127

Query: 136 NSQNFANTGN 146
           NSQ+FANTG+
Sbjct: 128 NSQSFANTGS 137

[Close]

BLAST of HG10022049 vs. TAIR 10
Match: AT1G18940.1 (Nodulin-like / Major Facilitator Superfamily protein )

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-22
Identity = 52/136 (38.24%), Postives = 75/136 (55.15%), Query Frame = 0


Query: 24  QVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTLQCDQTTLNKIGFYKDLGSNVGVI 83
           +++  +W ++ AS  +   AGG Y F  YS  +K+T   DQ+TL+ +  +KD+G NVGV+
Sbjct: 4   EILRTKWMAMTASIWIQCSAGGSYTFGIYSAILKSTQSYDQSTLDTVSVFKDIGGNVGVL 63

Query: 84  AGLMAEVAP--------------TWFVLLIGAAFNFLGYFKIWQAVTGKIVRPTVAYFCF 143
           +GL+   A                W V+LIGA  NF GYF +W +VTG I RP V   C 
Sbjct: 64  SGLVYTAATFNRRRRDGRERRGGPWVVILIGAILNFTGYFLMWASVTGLIKRPPVPVMCL 123

Query: 144 YIMVGANSQNFANTGN 146
           ++ + A S  F NT N
Sbjct: 124 FMFIAAQSLTFLNTAN 139

[Close]

BLAST of HG10022049 vs. TAIR 10
Match: AT1G74780.1 (Nodulin-like / Major Facilitator Superfamily protein )

HSP 1 Score: 93.2 bits (230), Expect = 1.9e-19
Identity = 48/138 (34.78%), Postives = 73/138 (52.90%), Query Frame = 0


Query: 24  QVVVGRWFSLFASFLVMTGAGGVYLFAYYSRDIKTTLQCDQTTLNKIGFYKDLGSNVGVI 83
           +++  +W ++ AS  +   +G  Y F  YS  +K+T   DQ+TL+ +  +KD+G+N GV 
Sbjct: 2   EILRTKWVAMTASIWIQCASGASYTFGIYSAVLKSTQSYDQSTLDTVSVFKDIGANAGVF 61

Query: 84  AGLMAEVAPT----------------WFVLLIGAAFNFLGYFKIWQAVTGKIVRPTVAYF 143
           +GL+   A +                W VL +GA   F GYF IW +VTG I +P V   
Sbjct: 62  SGLLYTYATSNRLRGRGGGIGGAGGPWVVLAVGAIQCFAGYFLIWASVTGLIRKPPVPLM 121

Query: 144 CFYIMVGANSQNFANTGN 146
           C ++ + A SQ F NT N
Sbjct: 122 CLFMFLAAQSQTFFNTAN 139

[Close]

BLAST of HG10022049 vs. TAIR 10
Match: AT5G14120.1 (Major facilitator superfamily protein )

HSP 1 Score: 89.4 bits (220), Expect = 2.7e-18
Identity = 46/116 (39.66%), Postives = 66/116 (56.90%), Query Frame = 0


Query: 29  RWFSLFASFLVMTGAGGVYLFAYYSRDIKTTLQCDQTTLNKIGFYKDLGSNVGVIAGLMA 88
           RW    A+  + + AG  YLF   S  IK++L  +Q  L+++G  KDLG +VG IAG ++
Sbjct: 16  RWLVFVAAMWIQSCAGIGYLFGSISPVIKSSLNYNQKELSRLGVAKDLGDSVGFIAGTLS 75

Query: 89  EVAPTWFVLLIGAAFNFLGYFKIWQAVTGKIVRPTVAYFCFYIMVGANSQNFANTG 145
           E+ P W  LL+GA  N +GY  +W  VTG+     +   C  I VG N + + NTG
Sbjct: 76  EILPLWAALLVGAVQNLIGYGWVWLIVTGRAPILPLWAMCVLIFVGNNGETYFNTG 131

The following BLAST results are available for this feature:

BLAST of HG10022049 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464809.1	3.5e-68	90.28	PREDICTED: uncharacterized protein LOC103502605 [Cucumis melo]	[more]
KAA0051898.1	6.6e-67	90.14	protein NUCLEAR FUSION DEFECTIVE 4 [Cucumis melo var. makuwa] >TYJ99888.1 protei...	[more]
KAG6583514.1	6.6e-67	87.50	Protein NUCLEAR FUSION DEFECTIVE 4, partial [Cucurbita argyrosperma subsp. soror...	[more]
XP_004147303.3	8.6e-67	87.50	uncharacterized protein LOC101202941 [Cucumis sativus] >KGN64782.2 hypothetical ...	[more]
XP_022964760.1	8.6e-67	87.50	uncharacterized protein LOC111464761 [Cucurbita moschata]	[more]

BLAST of HG10022049 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of HG10022049 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CMG9	1.7e-68	90.28	uncharacterized protein LOC103502605 OS=Cucumis melo OX=3656 GN=LOC103502605 PE=...	[more]
A0A5D3BP48	3.2e-67	90.14	Protein NUCLEAR FUSION DEFECTIVE 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1HLR3	4.1e-67	87.50	uncharacterized protein LOC111464761 OS=Cucurbita moschata OX=3662 GN=LOC1114647...	[more]
A0A6J1I5D1	2.1e-66	86.81	uncharacterized protein LOC111469394 OS=Cucurbita maxima OX=3661 GN=LOC111469394...	[more]
A0A6J1HYZ1	2.1e-66	86.81	uncharacterized protein LOC111469392 OS=Cucurbita maxima OX=3661 GN=LOC111469392...	[more]

BLAST of HG10022049 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28120.1	2.9e-44	62.12	Major facilitator superfamily protein	[more]
AT2G39210.1	1.9e-40	58.46	Major facilitator superfamily protein	[more]
AT1G18940.1	1.1e-22	38.24	Nodulin-like / Major Facilitator Superfamily protein	[more]
AT1G74780.1	1.9e-19	34.78	Nodulin-like / Major Facilitator Superfamily protein	[more]
AT5G14120.1	2.7e-18	39.66	Major facilitator superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010658	Nodulin-like	PFAM	PF06813	Nodulin-like	coord: 29..144 e-value: 4.2E-39 score: 134.6
None	No IPR available	PANTHER	PTHR21576	UNCHARACTERIZED NODULIN-LIKE PROTEIN	coord: 14..144
None	No IPR available	PANTHER	PTHR21576:SF29	PROTEIN NUCLEAR FUSION DEFECTIVE 4	coord: 14..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10022049.1	HG10022049.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity