HG10021967 (gene) Bottle gourd (Hangzhou Gourd) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGGATAAAAGTAACATGGACTCCCACACAAGGCAAGCCAGTTGGAGAAATGGCAATTCTATTTAATGGAGAAATAGGAGTTTTGGTGAGAAAATTCATCCCTTTAAAATATGAGAAACAAAAAGACATTCCAAATGAGCTTTATGATATTTTAACAAAACAATTGTTGGTAAGTTATATATTTTCTTTTGTCTATGGTTATTGTAAAGTTTATAATTATAATATGATACTAACCATTTTTATTATTTATTTTGTTATAAAGAATCAATTTGATGTTGACATCACTCAGCCACATATTAAGAGATACATCAATTACGAAATTGGTAATCGATTTAAAGATTATAGATGGACGTTGTATAAACACTACCAGAAATATGCTAATCCACGAAATCCGCATAAATATACTACTGCTAATGATTGGAATATTTTGTGCGATAGATGGGAGTCTTCTTCATGGAAGGTAAATAAGAATTGAGGTTTAATTTTATTGAACATATTTACAGGATAATTTTTCTAACGATTCATTCCAATGTAGGAAAAATCTGCGAAAAATAAAGTGAGTCAAAGTAAAATCCGATTCAATCATCGTGGTGGGTCAAAATCATTTCTATCTCATCGAGCAGATAAGGTATGAATGTATATTGTATTGATATAGTATAATTTGTGTTATATTTTAAATTTAATCTTGAATAAAAATATTGAAATAGGGAAAGGAAGATGCATACATAAGCCCCATTGAGGTTTTCTATGAAACACATTGTTCTGCTTCAAAGGGTTGAGTAGACCAAGCAGCAAAAGAAGCATATGTAAGTATTGTTTTAATGTTTTAGTAGATAATAGGGAATTAAAGAAACCTTTTTTGTAGTCTCGAAGTTTTGGGTCTAGTTTCTATTTGGTCCCTAGGTTTCAAAATGCTACATTTTTAGTCTTTTAACTTTTGAGTTTGATTTCGATTTAGTTCCAAGGTTTCAAAATGTTACAATTTCACCCTTGAGATTTGAGTTTTGTTGTAATTTAGTTTATCAGTTTCAAAATTTATGCCATTAACCTAGATTTTTCATTAAATATTTACTTTCAGTCTTTGGTGTTAATATGTATTCATTAATTTAATTTATAATCCTTTTAAATTAACTAGTAGACTTTACCACTAAAGACAGAAAGTGATTACTCAAAAAAAAAAAAAAAAAGTCGGAACATAAGTATTTAATGAAAAATCGAGGTTAAAAGTATAAATTTTGAAACCTAAGGACCAAATTGAAACAAAACTCAAAACTCAAGGGTGAAATTAACATTTTGAATCCTAGGAACTAAATTGAAATCAAACTAAAAAATTAGAGGCTGGGGTGTTGAGTTGGTCATTATAGTCAGTGATTATTATAGTTAGTGAGTTATAATAGTTTGTGTTTGGGGTCTAAATTATTTTAGTCTAGGTAGGAAACAATAAACACTATAGTAGAGTGGGAAAGAGAGGATGAGTAGGAAATAGTAAATACTATAACAAATAGTAAACATTGTAGCAAAGAAGAATTTGAAATAGTAATATGAACTGAAGTTAATTGTAAGTTATAAAATAGTTGGAAACACCAACTATTATAATAGGTGTCCAAACATGGAGTAGGCTATAATAGCCTACTCCACCAACTTCAAGTTAGTGCCCAAACACCCCTTTAAGGATTAAAAATGTAACATTTTGAAATCTAGGGACCAAATAGAAACTAGAACTAAAACCTAGAGATCAAAAAGGTATTTTCCGCGGATAATATTAGTTTTCTTTTTCTATAAAAAAGTAAAAAAAATACAAGTTTCAATGTTTTAAATAAATTTGTTGTGTTATGTGTAGGAAAATATGTTGATATTAAGGCAAGTTGAAAAAGATTCAAGTGCACCAAAGACTGATGAAGAAATTATGGTTATGGTTCTTGGAAAGAGATCATCATACATGAAAGGATTAAGATATGGACCAAAACCACCACGAAGTAAAGAAGCATCGTCTTACTCACAAGAGTATGTCGAATCTCTAGAGACTCGTCTTGCAAAGACTGAAGAATTATTAAAGGATCAACGCCAAGGGTATGAAAGAAAGTTTAGCCAAATGAATGAAATTCTGAAGAAGTTAAGTGAAGGAAGAGATGGCAAGAACTGA ATGGGAAGGATAAAAGTAACATGGACTCCCACACAAGGCAAGCCAGTTGGAGAAATGGCAATTCTATTTAATGGAGAAATAGGAGTTTTGGTGAGAAAATTCATCCCTTTAAAATATGAGAAACAAAAAGACATTCCAAATGAGCTTTATGATATTTTAACAAAACAATTGTTGAATCAATTTGATGTTGACATCACTCAGCCACATATTAAGAGATACATCAATTACGAAATTGGTAATCGATTTAAAGATTATAGATGGACGTTGTATAAACACTACCAGAAATATGCTAATCCACGAAATCCGCATAAATATACTACTGCTAATGATTGGAATATTTTGTGCGATAGATGGGAGTCTTCTTCATGGAAGGAAAATATGTTGATATTAAGGCAAGTTGAAAAAGATTCAAGTGCACCAAAGACTGATGAAGAAATTATGGTTATGGTTCTTGGAAAGAGATCATCATACATGAAAGGATTAAGATATGGACCAAAACCACCACGAAGTAAAGAAGCATCGTCTTACTCACAAGAGTATGTCGAATCTCTAGAGACTCGTCTTGCAAAGACTGAAGAATTATTAAAGGATCAACGCCAAGGGTATGAAAGAAAGTTTAGCCAAATGAATGAAATTCTGAAGAAGTTAAGTGAAGGAAGAGATGGCAAGAACTGA ATGGGAAGGATAAAAGTAACATGGACTCCCACACAAGGCAAGCCAGTTGGAGAAATGGCAATTCTATTTAATGGAGAAATAGGAGTTTTGGTGAGAAAATTCATCCCTTTAAAATATGAGAAACAAAAAGACATTCCAAATGAGCTTTATGATATTTTAACAAAACAATTGTTGAATCAATTTGATGTTGACATCACTCAGCCACATATTAAGAGATACATCAATTACGAAATTGGTAATCGATTTAAAGATTATAGATGGACGTTGTATAAACACTACCAGAAATATGCTAATCCACGAAATCCGCATAAATATACTACTGCTAATGATTGGAATATTTTGTGCGATAGATGGGAGTCTTCTTCATGGAAGGAAAATATGTTGATATTAAGGCAAGTTGAAAAAGATTCAAGTGCACCAAAGACTGATGAAGAAATTATGGTTATGGTTCTTGGAAAGAGATCATCATACATGAAAGGATTAAGATATGGACCAAAACCACCACGAAGTAAAGAAGCATCGTCTTACTCACAAGAGTATGTCGAATCTCTAGAGACTCGTCTTGCAAAGACTGAAGAATTATTAAAGGATCAACGCCAAGGGTATGAAAGAAAGTTTAGCCAAATGAATGAAATTCTGAAGAAGTTAAGTGAAGGAAGAGATGGCAAGAACTGA MGRIKVTWTPTQGKPVGEMAILFNGEIGVLVRKFIPLKYEKQKDIPNELYDILTKQLLNQFDVDITQPHIKRYINYEIGNRFKDYRWTLYKHYQKYANPRNPHKYTTANDWNILCDRWESSSWKENMLILRQVEKDSSAPKTDEEIMVMVLGKRSSYMKGLRYGPKPPRSKEASSYSQEYVESLETRLAKTEELLKDQRQGYERKFSQMNEILKKLSEGRDGKN Homology
BLAST of HG10021967 vs. NCBI nr
Match: XP_038895319.1 (uncharacterized protein LOC120083572 isoform X1 [Benincasa hispida]) HSP 1 Score: 284.6 bits (727), Expect = 7.1e-73 Identity = 153/244 (62.70%), Postives = 163/244 (66.80%), Query Frame = 0
BLAST of HG10021967 vs. NCBI nr
Match: XP_038895321.1 (uncharacterized protein LOC120083572 isoform X3 [Benincasa hispida]) HSP 1 Score: 247.7 bits (631), Expect = 9.7e-62 Identity = 115/129 (89.15%), Postives = 122/129 (94.57%), Query Frame = 0
BLAST of HG10021967 vs. NCBI nr
Match: XP_038895320.1 (uncharacterized protein LOC120083572 isoform X2 [Benincasa hispida]) HSP 1 Score: 247.7 bits (631), Expect = 9.7e-62 Identity = 115/129 (89.15%), Postives = 122/129 (94.57%), Query Frame = 0
BLAST of HG10021967 vs. NCBI nr
Match: XP_022143616.1 (uncharacterized protein LOC111013476 [Momordica charantia]) HSP 1 Score: 133.7 bits (335), Expect = 2.0e-27 Identity = 86/204 (42.16%), Postives = 109/204 (53.43%), Query Frame = 0
BLAST of HG10021967 vs. NCBI nr
Match: XP_022159083.1 (uncharacterized protein LOC111025525 [Momordica charantia]) HSP 1 Score: 131.7 bits (330), Expect = 7.7e-27 Identity = 64/129 (49.61%), Postives = 85/129 (65.89%), Query Frame = 0
BLAST of HG10021967 vs. ExPASy TrEMBL
Match: A0A6J1CQT5 (uncharacterized protein LOC111013476 OS=Momordica charantia OX=3673 GN=LOC111013476 PE=4 SV=1) HSP 1 Score: 133.7 bits (335), Expect = 9.9e-28 Identity = 86/204 (42.16%), Postives = 109/204 (53.43%), Query Frame = 0
BLAST of HG10021967 vs. ExPASy TrEMBL
Match: A0A6J1DXU5 (uncharacterized protein LOC111025525 OS=Momordica charantia OX=3673 GN=LOC111025525 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 3.7e-27 Identity = 64/129 (49.61%), Postives = 85/129 (65.89%), Query Frame = 0
BLAST of HG10021967 vs. ExPASy TrEMBL
Match: A0A6J1D6S9 (uncharacterized protein LOC111017461 OS=Momordica charantia OX=3673 GN=LOC111017461 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 2.7e-25 Identity = 83/209 (39.71%), Postives = 108/209 (51.67%), Query Frame = 0
BLAST of HG10021967 vs. ExPASy TrEMBL
Match: A0A438I7V1 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_042549 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 1.0e-24 Identity = 74/223 (33.18%), Postives = 129/223 (57.85%), Query Frame = 0
BLAST of HG10021967 vs. ExPASy TrEMBL
Match: A0A438G7G3 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_048835 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 8.4e-19 Identity = 71/251 (28.29%), Postives = 116/251 (46.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
|