HG10021925 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021925
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	RING-type domain-containing protein
Location	Chr05: 18402002 .. 18402437 (-)
RNA-Seq Expression	HG10021925
Synteny	HG10021925

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATCGCTGCCGTTTGTTGCCACTCCACCGGCGACACCGCCCAATTTTGAACTGACTTCGACGGATAAGTATTTGGCTGTGACTGCCATGCTTACCGTTATTATACTATACTTCATCGGCTTCAGTTCTATACAGAAAAAGAAATAATGACTCGGAATCCACCAGTGCGGTGGCCGGACCAATGCCGGCGTTGCAAGAGCCGGAGATTGTGCAGATTGAGGCCATGGCTTTTAGTTACAAGGAAGCTAAGGGAAGTGAGAATGATGATTATGAATGTGTGATTTGCTTGAACCAATTTAAAGGAGGAGAAAAGTGTCGATTGATGAAAAAATGTGGCCATATATTTCACCGGAGCTGCATCGACCGGTGGCTCATGGCGGAGCGACAATGCCCACTTTGCCGGAGCTGTGTTTGCATCGTCGTGAAACCATAA

mRNA sequence

ATGTCATCGCTGCCGTTTGTTGCCACTCCACCGGCGACACCGCCCAATTTTGAACTGACTTCGACGGATAAAAAAAGAAATAATGACTCGGAATCCACCAGTGCGGTGGCCGGACCAATGCCGGCGTTGCAAGAGCCGGAGATTGTGCAGATTGAGGCCATGGCTTTTAGTTACAAGGAAGCTAAGGGAAGTGAGAATGATGATTATGAATGTGTGATTTGCTTGAACCAATTTAAAGGAGGAGAAAAGTGTCGATTGATGAAAAAATGTGGCCATATATTTCACCGGAGCTGCATCGACCGGTGGCTCATGGCGGAGCGACAATGCCCACTTTGCCGGAGCTGTGTTTGCATCGTCGTGAAACCATAA

Coding sequence (CDS)

ATGTCATCGCTGCCGTTTGTTGCCACTCCACCGGCGACACCGCCCAATTTTGAACTGACTTCGACGGATAAAAAAAGAAATAATGACTCGGAATCCACCAGTGCGGTGGCCGGACCAATGCCGGCGTTGCAAGAGCCGGAGATTGTGCAGATTGAGGCCATGGCTTTTAGTTACAAGGAAGCTAAGGGAAGTGAGAATGATGATTATGAATGTGTGATTTGCTTGAACCAATTTAAAGGAGGAGAAAAGTGTCGATTGATGAAAAAATGTGGCCATATATTTCACCGGAGCTGCATCGACCGGTGGCTCATGGCGGAGCGACAATGCCCACTTTGCCGGAGCTGTGTTTGCATCGTCGTGAAACCATAA

Protein sequence

MSSLPFVATPPATPPNFELTSTDKKRNNDSESTSAVAGPMPALQEPEIVQIEAMAFSYKEAKGSENDDYECVICLNQFKGGEKCRLMKKCGHIFHRSCIDRWLMAERQCPLCRSCVCIVVKP

Homology

[Close]

BLAST of HG10021925 vs. NCBI nr
Match: KAE8653246.1 (hypothetical protein Csa_019623 [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 3.7e-31
Identity = 73/110 (66.36%), Postives = 84/110 (76.36%), Query Frame = 0


Query: 17  FELTSTDKKR-NNDSE-STSAVAGPMPALQEPEIVQIEAMAFS-YKEAKGSEN-DDYECV 76
           F   S D+K  NN+SE  T  V   +P  +E EIVQIE M FS Y+EAKGSEN DDYECV
Sbjct: 37  FSYRSKDQKAGNNESEFDTGTVEDRLPVFREREIVQIETMVFSYYREAKGSENDDDYECV 96

Query: 77  ICLNQFKGGEKCRLMKKCGHIFHRSCIDRWLMAERQCPLCRSCVCIVVKP 123
           ICLN+F+ G+KC+ MKKCGHIFH SCIDRWL  ER+CPLCRSCVC+VV P
Sbjct: 97  ICLNKFEDGQKCQWMKKCGHIFHCSCIDRWLRTERECPLCRSCVCVVVNP 146

[Close]

BLAST of HG10021925 vs. NCBI nr
Match: XP_004151032.1 (RING-H2 finger protein ATL66 [Cucumis sativus])

HSP 1 Score: 142.5 bits (358), Expect = 2.4e-30
Identity = 78/147 (53.06%), Postives = 90/147 (61.22%), Query Frame = 0


Query: 1   MSSLPFVATPPATPPNFELTSTD----------------------KKRNNDSE-STSAVA 60
           MS  P++A  P     FE    D                      K  NN+SE  T  V 
Sbjct: 1   MSPPPYIAASPMPTNGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNESEFDTGTVE 60

Query: 61  GPMPALQEPEIVQIEAMAFS-YKEAKGSEN-DDYECVICLNQFKGGEKCRLMKKCGHIFH 120
             +P  +E EIVQIE M FS Y+EAKGSEN DDYECVICLN+F+ G+KC+ MKKCGHIFH
Sbjct: 61  DRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFH 120

Query: 121 RSCIDRWLMAERQCPLCRSCVCIVVKP 123
            SCIDRWL  ER+CPLCRSCVC+VV P
Sbjct: 121 CSCIDRWLRTERECPLCRSCVCVVVNP 147

[Close]

BLAST of HG10021925 vs. NCBI nr
Match: XP_008457571.1 (PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo] >TYJ97408.1 RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa])

HSP 1 Score: 141.7 bits (356), Expect = 4.1e-30
Identity = 71/113 (62.83%), Postives = 82/113 (72.57%), Query Frame = 0


Query: 24  KKRNNDSESTSAVAG---PMPALQE------PEIVQIEAMAFSYKEAKGSEN-----DDY 83
           K  NND +S  +  G    +PA +E       EIVQIEAM FSY+EAK SEN     DDY
Sbjct: 46  KTGNNDYQSDQSDVGTVEELPAFRERVVRDQQEIVQIEAMVFSYREAKRSENDDDDDDDY 105

Query: 84  ECVICLNQFKGGEKCRLMKKCGHIFHRSCIDRWLMAERQCPLCRSCVCIVVKP 123
           ECVICLN+F+  +KCR MKKCGHIFHRSCIDRWL  ER+CPLCR+CVC+VVKP
Sbjct: 106 ECVICLNKFEDAQKCRWMKKCGHIFHRSCIDRWLKTERECPLCRTCVCVVVKP 158

[Close]

BLAST of HG10021925 vs. NCBI nr
Match: KAA0067735.1 (RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa])

HSP 1 Score: 141.4 bits (355), Expect = 5.3e-30
Identity = 71/114 (62.28%), Postives = 82/114 (71.93%), Query Frame = 0


Query: 24  KKRNNDSESTSAVAG---PMPALQE------PEIVQIEAMAFSYKEAKGSEN------DD 83
           K  NND +S  +  G    +PA +E       EIVQIEAM FSY+EAK SEN      DD
Sbjct: 46  KTGNNDYQSDQSDVGTVEELPAFRERVVRDQQEIVQIEAMVFSYREAKRSENDDDDDDDD 105

Query: 84  YECVICLNQFKGGEKCRLMKKCGHIFHRSCIDRWLMAERQCPLCRSCVCIVVKP 123
           YECVICLN+F+  +KCR MKKCGHIFHRSCIDRWL  ER+CPLCR+CVC+VVKP
Sbjct: 106 YECVICLNKFEDAQKCRWMKKCGHIFHRSCIDRWLKTERECPLCRTCVCVVVKP 159

[Close]

BLAST of HG10021925 vs. NCBI nr
Match: XP_022998666.1 (RING-H2 finger protein ATL56-like [Cucurbita maxima])

HSP 1 Score: 132.5 bits (332), Expect = 2.5e-27
Identity = 59/95 (62.11%), Postives = 73/95 (76.84%), Query Frame = 0


Query: 28  NDSESTSAVAGPMPALQEPEIVQIEAMAFSYKEAKGSENDDYECVICLNQFKGGEKCRLM 87
           ++ ES S  AG +P ++EPEIV+IEA  FSY+EA G  +D  EC ICL++F+ G+KCR M
Sbjct: 51  SELESGSEPAGALPVVREPEIVRIEASVFSYREADGGHDD--ECAICLDEFEDGQKCRKM 110

Query: 88  KKCGHIFHRSCIDRWLMAERQCPLCRSCVCIVVKP 123
            KCGHIFHR CIDRWL  +R CPLCRSCVC+VV P
Sbjct: 111 NKCGHIFHRRCIDRWLKVDRHCPLCRSCVCVVVHP 143

[Close]

BLAST of HG10021925 vs. ExPASy Swiss-Prot
Match: Q9LX93 (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.0e-12
Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 67  DDYECVICLNQFKGGEKCRLMKKCGHIFHRSCIDRWLMAERQCPLCRSCVCIVVKP 123
           D  EC +CLN+F+  E  RL+ KC H FH +CID WL++ + CPLCR+ V ++ +P
Sbjct: 131 DGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITEP 186

[Close]

BLAST of HG10021925 vs. ExPASy Swiss-Prot
Match: Q940Q4 (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2)

HSP 1 Score: 72.4 bits (176), Expect = 4.0e-12
Identity = 37/104 (35.58%), Postives = 59/104 (56.73%), Query Frame = 0


Query: 17  FELTSTDKKRNNDSESTSAVAGPMPA---LQEPEIVQ--IEAM-AFSYKEAKGSENDDYE 76
           F LT + + R +  ++ +A+ G +     L +  + Q  I+ +  F YK   G +N  ++
Sbjct: 74  FLLTPSSRDREDYFDNVTALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFD 133

Query: 77  CVICLNQFKGGEKCRLMKKCGHIFHRSCIDRWLMAERQCPLCRS 115
           C +CL +F+  +K RL+ KC H FH  CID WL++   CPLCRS
Sbjct: 134 CAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRS 177

[Close]

BLAST of HG10021925 vs. ExPASy Swiss-Prot
Match: Q9LUZ9 (RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 4.4e-11
Identity = 30/65 (46.15%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 56  FSYKEAKGSENDDYECVICLNQFKGGEKCRLMKKCGHIFHRSCIDRWLMAERQCPLCRSC 115
           F Y+E +  E+++ ECVICL  ++ G+  R ++ CGH FH  CID WL +   CPLCRS 
Sbjct: 123 FVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSP 182

Query: 116 VCIVV 121
           V   V
Sbjct: 183 VLAAV 187

[Close]

BLAST of HG10021925 vs. ExPASy Swiss-Prot
Match: Q8GW38 (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 5.7e-11
Identity = 27/58 (46.55%), Postives = 38/58 (65.52%), Query Frame = 0


Query: 56  FSYKEAKGSENDDYECVICLNQFKGGEKCRLMKKCGHIFHRSCIDRWLMAERQCPLCR 114
           F YKE KG++ + ++C +CL +F   +K RL+  C H FH  CID WL++   CPLCR
Sbjct: 130 FLYKEIKGTK-EPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCR 186

[Close]

BLAST of HG10021925 vs. ExPASy Swiss-Prot
Match: P0C034 (RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 7.5e-11
Identity = 29/60 (48.33%), Postives = 35/60 (58.33%), Query Frame = 0


Query: 57  SYKEAKGSENDDYECVICLNQFKGGEKCRLMKKCGHIFHRSCIDRWLMAERQCPLCRSCV 116
           SY         D ECVICL+ F  GE+ RL+ KC H FH  CID+WL     CP CR+C+
Sbjct: 121 SYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCL 180

[Close]

BLAST of HG10021925 vs. ExPASy TrEMBL
Match: A0A0A0LXE1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G515480 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.2e-30
Identity = 78/147 (53.06%), Postives = 90/147 (61.22%), Query Frame = 0


Query: 1   MSSLPFVATPPATPPNFELTSTD----------------------KKRNNDSE-STSAVA 60
           MS  P++A  P     FE    D                      K  NN+SE  T  V 
Sbjct: 1   MSPPPYIAASPMPTNGFEAIFDDFELLAAICFAIIVYFLSFTFYFKTGNNESEFDTGTVE 60

Query: 61  GPMPALQEPEIVQIEAMAFS-YKEAKGSEN-DDYECVICLNQFKGGEKCRLMKKCGHIFH 120
             +P  +E EIVQIE M FS Y+EAKGSEN DDYECVICLN+F+ G+KC+ MKKCGHIFH
Sbjct: 61  DRLPVFREREIVQIETMVFSYYREAKGSENDDDYECVICLNKFEDGQKCQWMKKCGHIFH 120

Query: 121 RSCIDRWLMAERQCPLCRSCVCIVVKP 123
            SCIDRWL  ER+CPLCRSCVC+VV P
Sbjct: 121 CSCIDRWLRTERECPLCRSCVCVVVNP 147

[Close]

BLAST of HG10021925 vs. ExPASy TrEMBL
Match: A0A5D3BGV5 (RING-H2 finger protein ATL66-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G002280 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.0e-30
Identity = 71/113 (62.83%), Postives = 82/113 (72.57%), Query Frame = 0


Query: 24  KKRNNDSESTSAVAG---PMPALQE------PEIVQIEAMAFSYKEAKGSEN-----DDY 83
           K  NND +S  +  G    +PA +E       EIVQIEAM FSY+EAK SEN     DDY
Sbjct: 46  KTGNNDYQSDQSDVGTVEELPAFRERVVRDQQEIVQIEAMVFSYREAKRSENDDDDDDDY 105

Query: 84  ECVICLNQFKGGEKCRLMKKCGHIFHRSCIDRWLMAERQCPLCRSCVCIVVKP 123
           ECVICLN+F+  +KCR MKKCGHIFHRSCIDRWL  ER+CPLCR+CVC+VVKP
Sbjct: 106 ECVICLNKFEDAQKCRWMKKCGHIFHRSCIDRWLKTERECPLCRTCVCVVVKP 158

[Close]

BLAST of HG10021925 vs. ExPASy TrEMBL
Match: A0A1S3C6H7 (RING-H2 finger protein ATL66-like OS=Cucumis melo OX=3656 GN=LOC103497236 PE=4 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 2.0e-30
Identity = 71/113 (62.83%), Postives = 82/113 (72.57%), Query Frame = 0


Query: 24  KKRNNDSESTSAVAG---PMPALQE------PEIVQIEAMAFSYKEAKGSEN-----DDY 83
           K  NND +S  +  G    +PA +E       EIVQIEAM FSY+EAK SEN     DDY
Sbjct: 46  KTGNNDYQSDQSDVGTVEELPAFRERVVRDQQEIVQIEAMVFSYREAKRSENDDDDDDDY 105

Query: 84  ECVICLNQFKGGEKCRLMKKCGHIFHRSCIDRWLMAERQCPLCRSCVCIVVKP 123
           ECVICLN+F+  +KCR MKKCGHIFHRSCIDRWL  ER+CPLCR+CVC+VVKP
Sbjct: 106 ECVICLNKFEDAQKCRWMKKCGHIFHRSCIDRWLKTERECPLCRTCVCVVVKP 158

[Close]

BLAST of HG10021925 vs. ExPASy TrEMBL
Match: A0A5A7VPW6 (RING-H2 finger protein ATL66-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00550 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.6e-30
Identity = 71/114 (62.28%), Postives = 82/114 (71.93%), Query Frame = 0


Query: 24  KKRNNDSESTSAVAG---PMPALQE------PEIVQIEAMAFSYKEAKGSEN------DD 83
           K  NND +S  +  G    +PA +E       EIVQIEAM FSY+EAK SEN      DD
Sbjct: 46  KTGNNDYQSDQSDVGTVEELPAFRERVVRDQQEIVQIEAMVFSYREAKRSENDDDDDDDD 105

Query: 84  YECVICLNQFKGGEKCRLMKKCGHIFHRSCIDRWLMAERQCPLCRSCVCIVVKP 123
           YECVICLN+F+  +KCR MKKCGHIFHRSCIDRWL  ER+CPLCR+CVC+VVKP
Sbjct: 106 YECVICLNKFEDAQKCRWMKKCGHIFHRSCIDRWLKTERECPLCRTCVCVVVKP 159

[Close]

BLAST of HG10021925 vs. ExPASy TrEMBL
Match: A0A6J1KAT3 (RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111493250 PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.2e-27
Identity = 59/95 (62.11%), Postives = 73/95 (76.84%), Query Frame = 0


Query: 28  NDSESTSAVAGPMPALQEPEIVQIEAMAFSYKEAKGSENDDYECVICLNQFKGGEKCRLM 87
           ++ ES S  AG +P ++EPEIV+IEA  FSY+EA G  +D  EC ICL++F+ G+KCR M
Sbjct: 51  SELESGSEPAGALPVVREPEIVRIEASVFSYREADGGHDD--ECAICLDEFEDGQKCRKM 110

Query: 88  KKCGHIFHRSCIDRWLMAERQCPLCRSCVCIVVKP 123
            KCGHIFHR CIDRWL  +R CPLCRSCVC+VV P
Sbjct: 111 NKCGHIFHRRCIDRWLKVDRHCPLCRSCVCVVVHP 143

[Close]

BLAST of HG10021925 vs. TAIR 10
Match: AT5G10380.1 (RING/U-box superfamily protein )

HSP 1 Score: 72.8 bits (177), Expect = 2.2e-13
Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 67  DDYECVICLNQFKGGEKCRLMKKCGHIFHRSCIDRWLMAERQCPLCRSCVCIVVKP 123
           D  EC +CLN+F+  E  RL+ KC H FH +CID WL++ + CPLCR+ V ++ +P
Sbjct: 131 DGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLITEP 186

[Close]

BLAST of HG10021925 vs. TAIR 10
Match: AT4G30400.1 (RING/U-box superfamily protein )

HSP 1 Score: 72.4 bits (176), Expect = 2.8e-13
Identity = 37/104 (35.58%), Postives = 59/104 (56.73%), Query Frame = 0


Query: 17  FELTSTDKKRNNDSESTSAVAGPMPA---LQEPEIVQ--IEAM-AFSYKEAKGSENDDYE 76
           F LT + + R +  ++ +A+ G +     L +  + Q  I+ +  F YK   G +N  ++
Sbjct: 74  FLLTPSSRDREDYFDNVTALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFD 133

Query: 77  CVICLNQFKGGEKCRLMKKCGHIFHRSCIDRWLMAERQCPLCRS 115
           C +CL +F+  +K RL+ KC H FH  CID WL++   CPLCRS
Sbjct: 134 CAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLSHSTCPLCRS 177

[Close]

BLAST of HG10021925 vs. TAIR 10
Match: AT5G58580.1 (TOXICOS EN LEVADURA 63 )

HSP 1 Score: 68.9 bits (167), Expect = 3.1e-12
Identity = 30/65 (46.15%), Postives = 41/65 (63.08%), Query Frame = 0


Query: 56  FSYKEAKGSENDDYECVICLNQFKGGEKCRLMKKCGHIFHRSCIDRWLMAERQCPLCRSC 115
           F Y+E +  E+++ ECVICL  ++ G+  R ++ CGH FH  CID WL +   CPLCRS 
Sbjct: 123 FVYEENEEEEDEEEECVICLGLWEAGDFGRKLRNCGHGFHVECIDMWLSSHSTCPLCRSP 182

Query: 116 VCIVV 121
           V   V
Sbjct: 183 VLAAV 187

[Close]

BLAST of HG10021925 vs. TAIR 10
Match: AT1G23980.1 (RING/U-box superfamily protein )

HSP 1 Score: 68.6 bits (166), Expect = 4.1e-12
Identity = 27/58 (46.55%), Postives = 38/58 (65.52%), Query Frame = 0


Query: 56  FSYKEAKGSENDDYECVICLNQFKGGEKCRLMKKCGHIFHRSCIDRWLMAERQCPLCR 114
           F YKE KG++ + ++C +CL +F   +K RL+  C H FH  CID WL++   CPLCR
Sbjct: 130 FLYKEIKGTK-EPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCR 186

[Close]

BLAST of HG10021925 vs. TAIR 10
Match: AT1G49220.1 (RING/U-box superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 5.3e-12
Identity = 29/60 (48.33%), Postives = 35/60 (58.33%), Query Frame = 0


Query: 57  SYKEAKGSENDDYECVICLNQFKGGEKCRLMKKCGHIFHRSCIDRWLMAERQCPLCRSCV 116
           SY         D ECVICL+ F  GE+ RL+ KC H FH  CID+WL     CP CR+C+
Sbjct: 121 SYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCRNCL 180

The following BLAST results are available for this feature:

BLAST of HG10021925 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8653246.1	3.7e-31	66.36	hypothetical protein Csa_019623 [Cucumis sativus]	[more]
XP_004151032.1	2.4e-30	53.06	RING-H2 finger protein ATL66 [Cucumis sativus]	[more]
XP_008457571.1	4.1e-30	62.83	PREDICTED: RING-H2 finger protein ATL66-like [Cucumis melo] >TYJ97408.1 RING-H2 ...	[more]
KAA0067735.1	5.3e-30	62.28	RING-H2 finger protein ATL66-like [Cucumis melo var. makuwa]	[more]
XP_022998666.1	2.5e-27	62.11	RING-H2 finger protein ATL56-like [Cucurbita maxima]	[more]

BLAST of HG10021925 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LX93	3.0e-12	48.21	E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 ...	[more]
Q940Q4	4.0e-12	35.58	RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2	[more]
Q9LUZ9	4.4e-11	46.15	RING-H2 finger protein ATL63 OS=Arabidopsis thaliana OX=3702 GN=ATL63 PE=2 SV=1	[more]
Q8GW38	5.7e-11	46.55	RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1	[more]
P0C034	7.5e-11	48.33	RING-H2 finger protein ATL10 OS=Arabidopsis thaliana OX=3702 GN=ATL10 PE=2 SV=1	[more]

BLAST of HG10021925 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXE1	1.2e-30	53.06	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G515480 P...	[more]
A0A5D3BGV5	2.0e-30	62.83	RING-H2 finger protein ATL66-like OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S3C6H7	2.0e-30	62.83	RING-H2 finger protein ATL66-like OS=Cucumis melo OX=3656 GN=LOC103497236 PE=4 S...	[more]
A0A5A7VPW6	2.6e-30	62.28	RING-H2 finger protein ATL66-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A6J1KAT3	1.2e-27	62.11	RING-type E3 ubiquitin transferase OS=Cucurbita maxima OX=3661 GN=LOC111493250 P...	[more]

BLAST of HG10021925 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10380.1	2.2e-13	48.21	RING/U-box superfamily protein	[more]
AT4G30400.1	2.8e-13	35.58	RING/U-box superfamily protein	[more]
AT5G58580.1	3.1e-12	46.15	TOXICOS EN LEVADURA 63	[more]
AT1G23980.1	4.1e-12	46.55	RING/U-box superfamily protein	[more]
AT1G49220.1	5.3e-12	48.33	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 71..112 e-value: 1.6E-7 score: 41.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 70..113 e-value: 5.1E-15 score: 55.6
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 71..113 score: 13.079398
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 26..117 e-value: 1.3E-20 score: 74.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 40..115
None	No IPR available	PANTHER	PTHR14155:SF550	RING-H2 FINGER PROTEIN ATL40	coord: 40..115
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 63..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021925.1	HG10021925.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane