HG10021893 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021893
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	C2H2-type domain-containing protein
Location	Chr05: 18020430 .. 18021008 (+)
RNA-Seq Expression	HG10021893
Synteny	HG10021893

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATTGATGATCAACAAGATGCAAGCTTTGAGTATCAAGAAGAACAAAGTGGTGTGAATAAATCAGCAGCTAGATCTTATGAGTGCACTTTTTGCAAAAGAGGCTTCACAAATGCACAAGCTTTAGGAGGCCATATGAACATACATAGAAAAGAGAAGGCCAAGCTCAAGCAATCAACATCGTCGCCTTCGTTGTCGTCGTCACCAAACAAGATGGTTTTAGACACCCTGAAGATGATTCTTCCGATGACGCCCCCAGCAAGGTTGTTGCCATGGTTTGTCTCGCCATCAACGGGAGAAGATCATGGTCGAAGCGGAGGTGGTCGAGAAGAAACCCTAATTTCAGAAGAAGTTCAACAACTCCCACTTTTCATCGAAAATCCCTCAAATATGGATCAAAATTTGGAGATTCATCAAGTTCTTCCGACCGAGGTTGATTCCGACCCAAAGCTAGGATCGTCGTTTCGACATGGTTCGTCTGTCTCCGAGCTGGATCTTGAGCTTAGGTTAGGACCTGAACCACAAAACTCAACTCCATCATCACTCCCTACTGGTAGGACTACACATTTCTTTTGA

mRNA sequence

ATGGAAATTGATGATCAACAAGATGCAAGCTTTGAGTATCAAGAAGAACAAAGTGGTGTGAATAAATCAGCAGCTAGATCTTATGAGTGCACTTTTTGCAAAAGAGGCTTCACAAATGCACAAGCTTTAGGAGGCCATATGAACATACATAGAAAAGAGAAGGCCAAGCTCAAGCAATCAACATCGTCGCCTTCGTTGTCGTCGTCACCAAACAAGATGGTTTTAGACACCCTGAAGATGATTCTTCCGATGACGCCCCCAGCAAGGTTGTTGCCATGGTTTGTCTCGCCATCAACGGGAGAAGATCATGGTCGAAGCGGAGGTGGTCGAGAAGAAACCCTAATTTCAGAAGAAGTTCAACAACTCCCACTTTTCATCGAAAATCCCTCAAATATGGATCAAAATTTGGAGATTCATCAAGTTCTTCCGACCGAGGTTGATTCCGACCCAAAGCTAGGATCGTCGTTTCGACATGGTTCGTCTGTCTCCGAGCTGGATCTTGAGCTTAGGTTAGGACCTGAACCACAAAACTCAACTCCATCATCACTCCCTACTGGTAGGACTACACATTTCTTTTGA

Coding sequence (CDS)

ATGGAAATTGATGATCAACAAGATGCAAGCTTTGAGTATCAAGAAGAACAAAGTGGTGTGAATAAATCAGCAGCTAGATCTTATGAGTGCACTTTTTGCAAAAGAGGCTTCACAAATGCACAAGCTTTAGGAGGCCATATGAACATACATAGAAAAGAGAAGGCCAAGCTCAAGCAATCAACATCGTCGCCTTCGTTGTCGTCGTCACCAAACAAGATGGTTTTAGACACCCTGAAGATGATTCTTCCGATGACGCCCCCAGCAAGGTTGTTGCCATGGTTTGTCTCGCCATCAACGGGAGAAGATCATGGTCGAAGCGGAGGTGGTCGAGAAGAAACCCTAATTTCAGAAGAAGTTCAACAACTCCCACTTTTCATCGAAAATCCCTCAAATATGGATCAAAATTTGGAGATTCATCAAGTTCTTCCGACCGAGGTTGATTCCGACCCAAAGCTAGGATCGTCGTTTCGACATGGTTCGTCTGTCTCCGAGCTGGATCTTGAGCTTAGGTTAGGACCTGAACCACAAAACTCAACTCCATCATCACTCCCTACTGGTAGGACTACACATTTCTTTTGA

Protein sequence

MEIDDQQDASFEYQEEQSGVNKSAARSYECTFCKRGFTNAQALGGHMNIHRKEKAKLKQSTSSPSLSSSPNKMVLDTLKMILPMTPPARLLPWFVSPSTGEDHGRSGGGREETLISEEVQQLPLFIENPSNMDQNLEIHQVLPTEVDSDPKLGSSFRHGSSVSELDLELRLGPEPQNSTPSSLPTGRTTHFF

Homology

[Close]

BLAST of HG10021893 vs. NCBI nr
Match: XP_038895788.1 (transcriptional regulator TAC1-like [Benincasa hispida])

HSP 1 Score: 311.6 bits (797), Expect = 4.7e-81
Identity = 165/192 (85.94%), Postives = 170/192 (88.54%), Query Frame = 0


Query: 1   MEIDDQQDASFEYQEEQSGVNKSAARSYECTFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60
           MEI DQQDAS EYQEEQSGVNKSAARSYEC FCKRGFTNAQALGGHMNIHRKEKAKLKQS
Sbjct: 1   MEI-DQQDASCEYQEEQSGVNKSAARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60

Query: 61  TSSPSLSSSPNKMVLDTLKMILPMTPPARLLPWFVSPSTGEDHGRSGGGREETLISEEVQ 120
            SSPSLSSS NKMV+D  KMI   TPP   LPW VSPS  E H RSGGGREETLISEEVQ
Sbjct: 61  ISSPSLSSSSNKMVVDIPKMIPRTTPPQ--LPWVVSPSMSEGHRRSGGGREETLISEEVQ 120

Query: 121 QLPLFIENPSNMDQNLEIHQVLPTEVDSDPKLGSSFRHGSSVSELDLELRLGPEPQNSTP 180
           QLPLF++N SNMDQNL+IHQVLP EV SDPKLGSSFRHGSS+SELDLELRLGPEPQNSTP
Sbjct: 121 QLPLFVKNTSNMDQNLKIHQVLPIEVASDPKLGSSFRHGSSISELDLELRLGPEPQNSTP 180

Query: 181 SSLPTGRTTHFF 193
           SSL TGRTTHFF
Sbjct: 181 SSLSTGRTTHFF 189

[Close]

BLAST of HG10021893 vs. NCBI nr
Match: XP_004145329.1 (transcriptional regulator TAC1 [Cucumis sativus] >KGN65749.1 hypothetical protein Csa_019602 [Cucumis sativus])

HSP 1 Score: 283.9 bits (725), Expect = 1.0e-72
Identity = 156/195 (80.00%), Postives = 166/195 (85.13%), Query Frame = 0


Query: 1   MEIDDQQDASFEYQEEQSGVNKSAARSYECTFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60
           MEID Q+DAS EYQEEQSGVN+S  RSYEC FCKRGFTNAQALGGHMNIHRKEKAKLKQS
Sbjct: 1   MEIDQQEDASCEYQEEQSGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60

Query: 61  TSSPSLSSSPNKMVLDTLKMILPMTPPARLLPWFV-SPSTGEDHGRSGGGREETLISEEV 120
            ++ SLSSSPNKMV+DT KM   M+ P R LPW V SPST ++HGRS GG EETLISEE 
Sbjct: 61  ITTSSLSSSPNKMVVDTPKM---MSTPTR-LPWVVISPSTRKEHGRSKGGLEETLISEEF 120

Query: 121 QQLPLFIE-NPSNMDQNLEIHQVLPTEVDSDPKLGSSFRHGSSVSELDLELRLGPEPQNS 180
           QQLPLF+E NPSNMDQNLEI QVLP +VD D KLGS  RHGSSVSELDLELRLGPEPQNS
Sbjct: 121 QQLPLFVENNPSNMDQNLEIRQVLPIDVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNS 180

Query: 181 T-PSSLPTGRTTHFF 193
           T  SSLPTGRTTHFF
Sbjct: 181 TSSSSLPTGRTTHFF 191

[Close]

BLAST of HG10021893 vs. NCBI nr
Match: XP_008457447.1 (PREDICTED: transcriptional regulator TAC1-like [Cucumis melo] >KAA0067767.1 transcriptional regulator TAC1-like [Cucumis melo var. makuwa] >TYJ97379.1 transcriptional regulator TAC1-like [Cucumis melo var. makuwa])

HSP 1 Score: 275.0 bits (702), Expect = 4.9e-70
Identity = 156/196 (79.59%), Postives = 165/196 (84.18%), Query Frame = 0


Query: 1   MEIDDQQDASFEYQEEQSGVNKSAARSYECTFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60
           MEID Q+DAS EYQ EQSGVN+S ARSYEC FCKRGFTNAQALGGHMNIHRKEKAKLKQS
Sbjct: 1   MEIDQQEDASCEYQ-EQSGVNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60

Query: 61  TSSPSLSSSPNKMVLDTLKMILPMTPPARLLPWFV-SPSTGEDHGRSGG-GREETLISEE 120
            ++ SLSSSPNKMV+DT KM   M+ P R  PW V SPST E+HGRS   G EETLISEE
Sbjct: 61  ITTSSLSSSPNKMVVDTPKM---MSTPTR-FPWVVISPSTREEHGRSNRCGLEETLISEE 120

Query: 121 VQQLPLFIE-NPSNMDQNLEIHQVLPTEVDSDPKLGSSFRHGSSVSELDLELRLGPEPQN 180
            QQLPLF+E NPSN+DQNLEI QVLP EVD D KLGS  RHGSSVSELDLELRLGPEPQN
Sbjct: 121 FQQLPLFVENNPSNIDQNLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQN 180

Query: 181 STPS-SLPTGRTTHFF 193
           STPS SLPTGRTTHFF
Sbjct: 181 STPSTSLPTGRTTHFF 191

[Close]

BLAST of HG10021893 vs. NCBI nr
Match: XP_022141797.1 (transcriptional regulator TAC1-like [Momordica charantia])

HSP 1 Score: 199.1 bits (505), Expect = 3.4e-47
Identity = 118/202 (58.42%), Postives = 136/202 (67.33%), Query Frame = 0


Query: 1   MEIDDQQDASFEYQEEQSGVNKSAARSYECTFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60
           MEID+         E+Q  + +   RSYECTFCKRGFTNAQALGGHMNIHRK+KAK+KQS
Sbjct: 1   MEIDEAGAGCEIQDEDQVMIQEEHIRSYECTFCKRGFTNAQALGGHMNIHRKDKAKMKQS 60

Query: 61  TSSPSLSSSPNKMVLDTLKMILPMTPPARLLPWFVSPST------GEDHGRSG----GGR 120
            SS SLS S NKM +D +  I+  + PAR LPW +  +T      GED G  G       
Sbjct: 61  ASSSSLSMSSNKMPVDDISKII--STPAR-LPWVIPSTTTEGRGRGEDRGEIGEITSSTM 120

Query: 121 EETLISEEVQQLPLFIENPSNMDQNLEIHQVLPTEVDSDPKLGSSFRHGSSVSELDLELR 180
           EETL   +VQQL LF E  SNMDQ   +HQVLP E  SD K+   F+HGS+VSELDLELR
Sbjct: 121 EETL-KGKVQQLQLF-EKSSNMDQKFRVHQVLPLEASSDQKMVPPFQHGSTVSELDLELR 180

Query: 181 LGPEPQNSTPSSLPTGRTTHFF 193
           LGPEPQNSTPSS PTG + HFF
Sbjct: 181 LGPEPQNSTPSSTPTGSSRHFF 197

[Close]

BLAST of HG10021893 vs. NCBI nr
Match: XP_022755817.1 (transcriptional regulator SUPERMAN-like [Durio zibethinus])

HSP 1 Score: 118.6 bits (296), Expect = 5.8e-23
Identity = 82/185 (44.32%), Postives = 103/185 (55.68%), Query Frame = 0


Query: 14  QEEQSGVNKSAARSYECTFCKRGFTNAQALGGHMNIHRKEKAKLKQS----TSSPSL--- 73
           QE       + ARSY+CTFCKRGF+NAQALGGHMNIHR++KAKLKQ+    T+  SL   
Sbjct: 13  QESSDEQEANPARSYKCTFCKRGFSNAQALGGHMNIHRRDKAKLKQALPSETTQRSLDIP 72

Query: 74  ----SSSPNKMVLDTLKMIL------PMTPPARLLPWFVSPSTGEDHGRSGGGREETLIS 133
               S SPN     T++ I         + P R  PW +     +D  +     + T   
Sbjct: 73  KIIPSYSPNHPSWTTIQSIADSRSTQDRSSPGR-WPWVIQDDDDDDDNKR---TKTTCHV 132

Query: 134 EEVQQLPLFIENPSNMDQNLEIHQVLPTEVDSDPKLGSSFRHGSSVSELDLELRLGPEPQ 182
            E++QLPLF E PS  DQN        ++V    +   S   GSS SELDLELRLGPEPQ
Sbjct: 133 GEIRQLPLFDEKPSITDQNPS------SQVQGGTEKDFSSNQGSSGSELDLELRLGPEPQ 187

[Close]

BLAST of HG10021893 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-09
Identity = 50/172 (29.07%), Postives = 86/172 (50.00%), Query Frame = 0


Query: 4   DDQQDASFEYQEEQSGVNKSAARSYECTFCKRGFTNAQALGGHMNIHRKEKAKLKQSTSS 63
           DD  D+  +   +    + + +RSY C+FC RGF+NAQALGGHMNIHR+++AKL+Q    
Sbjct: 11  DDCSDSISKNSHQGVDDSLNQSRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQ---- 70

Query: 64  PSLSSSPNKMVLDTLKMILPMTPPARLLPWFVSPSTGEDHGRSGGGREETLISEEV---Q 123
                   K++ D    ++  +  + ++   ++    +          +  +  ++   Q
Sbjct: 71  --------KLMEDNKDDVVAESDASEVVSLDLNEQQQQQGEALTCDDHDQYVDNDISPKQ 130

Query: 124 QLPLFIENPSNMDQNLEIHQVLPTEVDSDPKLGSSFRHGSSVSELDLELRLG 173
           +L  +++  S +D N +  +V    +D     GSS  H   +  LDLELRLG
Sbjct: 131 KLEFWVQE-SKLDTN-DHGKVTEASID-----GSSSSHHRDIEVLDLELRLG 163

[Close]

BLAST of HG10021893 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-08
Identity = 28/46 (60.87%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 26 RSYECTFCKRGFTNAQALGGHMNIHRKEKAKLKQSTSSPSLSSSPN 72
          RSY C+FCKR F +AQALGGHMN+HR+++A+L+    SPS SS+P+
Sbjct: 45 RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQ-QSPSSSSTPS 89

[Close]

BLAST of HG10021893 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 5.5e-08
Identity = 29/61 (47.54%), Postives = 42/61 (68.85%), Query Frame = 0


Query: 13 YQEEQSGVNKSAARSYECTFCKRGFTNAQALGGHMNIHRKEKAKLKQSTSS---PSLSSS 71
          + E+ +  +    RSY C+FC+R F +AQALGGHMN+HR+++A+LKQ+      P  SSS
Sbjct: 24 FAEDDAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRARLKQADDQYLFPKSSSS 83

[Close]

BLAST of HG10021893 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 58.9 bits (141), Expect = 7.2e-08
Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 0


Query: 6   QQDASFEYQEEQSGVNKS--AARSYECTFCKRGFTNAQALGGHMNIHRKEKAKLKQSTSS 65
           +++ +F   EE  G        RSY C+FC R F +AQALGGHMN+HR+++A+LKQ + S
Sbjct: 31  REERAFASAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLS 90

Query: 66  PSLSSSPNKMVLDTLKMIL 83
           PS +        D  + +L
Sbjct: 91  PSSTDQATPPECDRQQQVL 109

[Close]

BLAST of HG10021893 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.7e-07
Identity = 24/50 (48.00%), Postives = 38/50 (76.00%), Query Frame = 0


Query: 13 YQEEQSGVNKSAARSYECTFCKRGFTNAQALGGHMNIHRKEKAKLKQSTS 63
          Y+  ++G+     ++Y C+FC+R F +AQALGGHMN+HR+++AKL+Q  S
Sbjct: 34 YKNYEAGLIPWPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPS 83

[Close]

BLAST of HG10021893 vs. ExPASy TrEMBL
Match: A0A0A0LXG2 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G524710 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 5.1e-73
Identity = 156/195 (80.00%), Postives = 166/195 (85.13%), Query Frame = 0


Query: 1   MEIDDQQDASFEYQEEQSGVNKSAARSYECTFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60
           MEID Q+DAS EYQEEQSGVN+S  RSYEC FCKRGFTNAQALGGHMNIHRKEKAKLKQS
Sbjct: 1   MEIDQQEDASCEYQEEQSGVNQSTVRSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60

Query: 61  TSSPSLSSSPNKMVLDTLKMILPMTPPARLLPWFV-SPSTGEDHGRSGGGREETLISEEV 120
            ++ SLSSSPNKMV+DT KM   M+ P R LPW V SPST ++HGRS GG EETLISEE 
Sbjct: 61  ITTSSLSSSPNKMVVDTPKM---MSTPTR-LPWVVISPSTRKEHGRSKGGLEETLISEEF 120

Query: 121 QQLPLFIE-NPSNMDQNLEIHQVLPTEVDSDPKLGSSFRHGSSVSELDLELRLGPEPQNS 180
           QQLPLF+E NPSNMDQNLEI QVLP +VD D KLGS  RHGSSVSELDLELRLGPEPQNS
Sbjct: 121 QQLPLFVENNPSNMDQNLEIRQVLPIDVDCDSKLGSPSRHGSSVSELDLELRLGPEPQNS 180

Query: 181 T-PSSLPTGRTTHFF 193
           T  SSLPTGRTTHFF
Sbjct: 181 TSSSSLPTGRTTHFF 191

[Close]

BLAST of HG10021893 vs. ExPASy TrEMBL
Match: A0A5A7VKP9 (Transcriptional regulator TAC1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001930 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.4e-70
Identity = 156/196 (79.59%), Postives = 165/196 (84.18%), Query Frame = 0


Query: 1   MEIDDQQDASFEYQEEQSGVNKSAARSYECTFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60
           MEID Q+DAS EYQ EQSGVN+S ARSYEC FCKRGFTNAQALGGHMNIHRKEKAKLKQS
Sbjct: 1   MEIDQQEDASCEYQ-EQSGVNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60

Query: 61  TSSPSLSSSPNKMVLDTLKMILPMTPPARLLPWFV-SPSTGEDHGRSGG-GREETLISEE 120
            ++ SLSSSPNKMV+DT KM   M+ P R  PW V SPST E+HGRS   G EETLISEE
Sbjct: 61  ITTSSLSSSPNKMVVDTPKM---MSTPTR-FPWVVISPSTREEHGRSNRCGLEETLISEE 120

Query: 121 VQQLPLFIE-NPSNMDQNLEIHQVLPTEVDSDPKLGSSFRHGSSVSELDLELRLGPEPQN 180
            QQLPLF+E NPSN+DQNLEI QVLP EVD D KLGS  RHGSSVSELDLELRLGPEPQN
Sbjct: 121 FQQLPLFVENNPSNIDQNLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQN 180

Query: 181 STPS-SLPTGRTTHFF 193
           STPS SLPTGRTTHFF
Sbjct: 181 STPSTSLPTGRTTHFF 191

[Close]

BLAST of HG10021893 vs. ExPASy TrEMBL
Match: A0A1S3C679 (transcriptional regulator TAC1-like OS=Cucumis melo OX=3656 GN=LOC103497134 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.4e-70
Identity = 156/196 (79.59%), Postives = 165/196 (84.18%), Query Frame = 0


Query: 1   MEIDDQQDASFEYQEEQSGVNKSAARSYECTFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60
           MEID Q+DAS EYQ EQSGVN+S ARSYEC FCKRGFTNAQALGGHMNIHRKEKAKLKQS
Sbjct: 1   MEIDQQEDASCEYQ-EQSGVNQSTARSYECNFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60

Query: 61  TSSPSLSSSPNKMVLDTLKMILPMTPPARLLPWFV-SPSTGEDHGRSGG-GREETLISEE 120
            ++ SLSSSPNKMV+DT KM   M+ P R  PW V SPST E+HGRS   G EETLISEE
Sbjct: 61  ITTSSLSSSPNKMVVDTPKM---MSTPTR-FPWVVISPSTREEHGRSNRCGLEETLISEE 120

Query: 121 VQQLPLFIE-NPSNMDQNLEIHQVLPTEVDSDPKLGSSFRHGSSVSELDLELRLGPEPQN 180
            QQLPLF+E NPSN+DQNLEI QVLP EVD D KLGS  RHGSSVSELDLELRLGPEPQN
Sbjct: 121 FQQLPLFVENNPSNIDQNLEIRQVLPIEVDCDSKLGSPSRHGSSVSELDLELRLGPEPQN 180

Query: 181 STPS-SLPTGRTTHFF 193
           STPS SLPTGRTTHFF
Sbjct: 181 STPSTSLPTGRTTHFF 191

[Close]

BLAST of HG10021893 vs. ExPASy TrEMBL
Match: A0A6J1CKV7 (transcriptional regulator TAC1-like OS=Momordica charantia OX=3673 GN=LOC111012082 PE=4 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.6e-47
Identity = 118/202 (58.42%), Postives = 136/202 (67.33%), Query Frame = 0


Query: 1   MEIDDQQDASFEYQEEQSGVNKSAARSYECTFCKRGFTNAQALGGHMNIHRKEKAKLKQS 60
           MEID+         E+Q  + +   RSYECTFCKRGFTNAQALGGHMNIHRK+KAK+KQS
Sbjct: 1   MEIDEAGAGCEIQDEDQVMIQEEHIRSYECTFCKRGFTNAQALGGHMNIHRKDKAKMKQS 60

Query: 61  TSSPSLSSSPNKMVLDTLKMILPMTPPARLLPWFVSPST------GEDHGRSG----GGR 120
            SS SLS S NKM +D +  I+  + PAR LPW +  +T      GED G  G       
Sbjct: 61  ASSSSLSMSSNKMPVDDISKII--STPAR-LPWVIPSTTTEGRGRGEDRGEIGEITSSTM 120

Query: 121 EETLISEEVQQLPLFIENPSNMDQNLEIHQVLPTEVDSDPKLGSSFRHGSSVSELDLELR 180
           EETL   +VQQL LF E  SNMDQ   +HQVLP E  SD K+   F+HGS+VSELDLELR
Sbjct: 121 EETL-KGKVQQLQLF-EKSSNMDQKFRVHQVLPLEASSDQKMVPPFQHGSTVSELDLELR 180

Query: 181 LGPEPQNSTPSSLPTGRTTHFF 193
           LGPEPQNSTPSS PTG + HFF
Sbjct: 181 LGPEPQNSTPSSTPTGSSRHFF 197

[Close]

BLAST of HG10021893 vs. ExPASy TrEMBL
Match: A0A6P5ZTD0 (transcriptional regulator SUPERMAN-like OS=Durio zibethinus OX=66656 GN=LOC111303662 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 2.8e-23
Identity = 82/185 (44.32%), Postives = 103/185 (55.68%), Query Frame = 0


Query: 14  QEEQSGVNKSAARSYECTFCKRGFTNAQALGGHMNIHRKEKAKLKQS----TSSPSL--- 73
           QE       + ARSY+CTFCKRGF+NAQALGGHMNIHR++KAKLKQ+    T+  SL   
Sbjct: 13  QESSDEQEANPARSYKCTFCKRGFSNAQALGGHMNIHRRDKAKLKQALPSETTQRSLDIP 72

Query: 74  ----SSSPNKMVLDTLKMIL------PMTPPARLLPWFVSPSTGEDHGRSGGGREETLIS 133
               S SPN     T++ I         + P R  PW +     +D  +     + T   
Sbjct: 73  KIIPSYSPNHPSWTTIQSIADSRSTQDRSSPGR-WPWVIQDDDDDDDNKR---TKTTCHV 132

Query: 134 EEVQQLPLFIENPSNMDQNLEIHQVLPTEVDSDPKLGSSFRHGSSVSELDLELRLGPEPQ 182
            E++QLPLF E PS  DQN        ++V    +   S   GSS SELDLELRLGPEPQ
Sbjct: 133 GEIRQLPLFDEKPSITDQNPS------SQVQGGTEKDFSSNQGSSGSELDLELRLGPEPQ 187

[Close]

BLAST of HG10021893 vs. TAIR 10
Match: AT3G09290.1 (telomerase activator1 )

HSP 1 Score: 64.3 bits (155), Expect = 1.2e-10
Identity = 50/172 (29.07%), Postives = 86/172 (50.00%), Query Frame = 0


Query: 4   DDQQDASFEYQEEQSGVNKSAARSYECTFCKRGFTNAQALGGHMNIHRKEKAKLKQSTSS 63
           DD  D+  +   +    + + +RSY C+FC RGF+NAQALGGHMNIHR+++AKL+Q    
Sbjct: 11  DDCSDSISKNSHQGVDDSLNQSRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQ---- 70

Query: 64  PSLSSSPNKMVLDTLKMILPMTPPARLLPWFVSPSTGEDHGRSGGGREETLISEEV---Q 123
                   K++ D    ++  +  + ++   ++    +          +  +  ++   Q
Sbjct: 71  --------KLMEDNKDDVVAESDASEVVSLDLNEQQQQQGEALTCDDHDQYVDNDISPKQ 130

Query: 124 QLPLFIENPSNMDQNLEIHQVLPTEVDSDPKLGSSFRHGSSVSELDLELRLG 173
           +L  +++  S +D N +  +V    +D     GSS  H   +  LDLELRLG
Sbjct: 131 KLEFWVQE-SKLDTN-DHGKVTEASID-----GSSSSHHRDIEVLDLELRLG 163

[Close]

BLAST of HG10021893 vs. TAIR 10
Match: AT3G53820.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 1.6e-10
Identity = 28/38 (73.68%), Postives = 34/38 (89.47%), Query Frame = 0


Query: 23 SAARSYECTFCKRGFTNAQALGGHMNIHRKEKAKLKQS 61
          S AR Y C FC+RGF+NAQALGGHMNIHRK++AKL+Q+
Sbjct: 16 SQARPYICEFCERGFSNAQALGGHMNIHRKDRAKLRQA 53

[Close]

BLAST of HG10021893 vs. TAIR 10
Match: AT3G23140.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 2.7e-10
Identity = 55/171 (32.16%), Postives = 79/171 (46.20%), Query Frame = 0


Query: 18  SGVNKSAARSYECTFCKRGFTNAQALGGHMNIHRKEKAKLKQSTSS--------PSLSSS 77
           SG N+   R+Y+C  CKRGFTN QALGGH NIHR+E+ +   S+SS        P  S S
Sbjct: 14  SGENR---RTYDCDICKRGFTNPQALGGHNNIHRRERERYPSSSSSSHSFPFSLPLPSQS 73

Query: 78  PNKMV--------LDTLKMILPMTPPARLLPWFVSPSTGEDHGRSGGGREETLISEEVQQ 137
           P+             T++  L       + P   +   G      GGGR     S ++  
Sbjct: 74  PSSSTNFTNPPPYFPTIESYLHQGSQPPINPSHNTQYFGSSSSSRGGGRFAQGASHDL-N 133

Query: 138 LPLFIENPSNMDQNLEIHQVLPTEVDSDPKLGSSFRHGSSVSELDLELRLG 173
           L L +    +M+++ + H+  P    S P+ G          +LDL+LRLG
Sbjct: 134 LSLGL---GSMNEDDDTHRSPPETGGSQPQDG----------DLDLDLRLG 167

[Close]

BLAST of HG10021893 vs. TAIR 10
Match: AT5G43540.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 6.0e-10
Identity = 33/55 (60.00%), Postives = 41/55 (74.55%), Query Frame = 0


Query: 18 SGVNKSAARSYECTFCKRGFTNAQALGGHMNIHRKE---KAKLKQSTSSPSLSSS 70
          S V+    R YECTFCKRGFTNAQALGGHMNIHR++   KAK+ Q+ +  +LS +
Sbjct: 25 SSVSTVTRRMYECTFCKRGFTNAQALGGHMNIHRRDRLNKAKV-QNDADVALSQT 78

[Close]

BLAST of HG10021893 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.3e-09
Identity = 28/46 (60.87%), Postives = 38/46 (82.61%), Query Frame = 0


Query: 26 RSYECTFCKRGFTNAQALGGHMNIHRKEKAKLKQSTSSPSLSSSPN 72
          RSY C+FCKR F +AQALGGHMN+HR+++A+L+    SPS SS+P+
Sbjct: 45 RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQ-QSPSSSSTPS 89

The following BLAST results are available for this feature:

BLAST of HG10021893 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895788.1	4.7e-81	85.94	transcriptional regulator TAC1-like [Benincasa hispida]	[more]
XP_004145329.1	1.0e-72	80.00	transcriptional regulator TAC1 [Cucumis sativus] >KGN65749.1 hypothetical protei...	[more]
XP_008457447.1	4.9e-70	79.59	PREDICTED: transcriptional regulator TAC1-like [Cucumis melo] >KAA0067767.1 tran...	[more]
XP_022141797.1	3.4e-47	58.42	transcriptional regulator TAC1-like [Momordica charantia]	[more]
XP_022755817.1	5.8e-23	44.32	transcriptional regulator SUPERMAN-like [Durio zibethinus]	[more]

BLAST of HG10021893 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SR34	1.7e-09	29.07	Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1	[more]
Q38895	1.9e-08	60.87	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S...	[more]
O80942	5.5e-08	47.54	Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1	[more]
Q9LHS9	7.2e-08	40.51	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9SLB8	2.7e-07	48.00	Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1	[more]

BLAST of HG10021893 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXG2	5.1e-73	80.00	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G524710 P...	[more]
A0A5A7VKP9	2.4e-70	79.59	Transcriptional regulator TAC1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3C679	2.4e-70	79.59	transcriptional regulator TAC1-like OS=Cucumis melo OX=3656 GN=LOC103497134 PE=4...	[more]
A0A6J1CKV7	1.6e-47	58.42	transcriptional regulator TAC1-like OS=Momordica charantia OX=3673 GN=LOC1110120...	[more]
A0A6P5ZTD0	2.8e-23	44.32	transcriptional regulator SUPERMAN-like OS=Durio zibethinus OX=66656 GN=LOC11130...	[more]

BLAST of HG10021893 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09290.1	1.2e-10	29.07	telomerase activator1	[more]
AT3G53820.1	1.6e-10	73.68	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G23140.1	2.7e-10	32.16	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT5G43540.1	6.0e-10	60.00	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT3G23130.1	1.3e-09	60.87	C2H2 and C2HC zinc fingers superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 28..50 e-value: 0.0097 score: 25.1
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 30..50
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 28..55 score: 11.988008
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 5..79 e-value: 5.0E-9 score: 37.8
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 28..53 e-value: 1.1E-5 score: 25.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 174..192
None	No IPR available	PANTHER	PTHR45801	OS07G0101800 PROTEIN	coord: 4..179
None	No IPR available	PANTHER	PTHR45801:SF58	TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED	coord: 4..179
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 26..55

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021893.1	HG10021893.1	mRNA