HG10021891 (gene) Bottle gourd (Hangzhou Gourd) v1

Overview


Name	HG10021891
Type	gene
Organism	Lagenaria siceraria cv. Hangzhou Gourd (Bottle gourd (Hangzhou Gourd) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr05: 18000621 .. 18001733 (-)
RNA-Seq Expression	HG10021891
Synteny	HG10021891

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTCAGTGTACTCCAAGCTTGTGCTGCTCTTGCTGCCCTGGAGCAAGGGAAGCTTATCCACGCTTACATTCTTAGGAGGGGTCTTGATTCAATCTTGCCAGTTATAAGTGCTCTTGTGACCATGTATGCAAGATGTGGTAAGCTTGAATTAGGCCAACTAGTTTTTGACCGTATGCATAAGAGAGATGTTGTCTTATGGAATTCCTTGATTTCGAGTTATGGAGTGCATGGATATGGAAGAAAAGCAATCGAAATTTTTGAAGAGATGATTGATCATGGAGTCTCACCTAGTTACATATCATTTGTAAGTGTTTTGGGTGCTTGCAGCCATGCTGGGCTTGTTGAAGAGGGTAAGGAGTTGTTTGAATCCATGGTAAAGGAACATGGTATACAGCCTAGTGTAGAGCACTATGCTTGTATGGTTGATCTTCTTGGGCGTGCTAACCGGTTGGATGAAGCAGCCAAGATTGTAGAAGATCTGCGTATTGAACCAGGGCCAAAAGTATGGGGTTCTCTTCTTGGTGCCTGTAGGATTCATTGTCATGTTGAGCTTGCCGAACGAGCAAGCAAAAGACTTTTTGAGCTTGAGCCTACGAATGCCGGGAATTATGTACTTCTAGCTGATATTTATGCAGAAGCTGAAATGTGGGATGAGGTAAAGAGAGTGAGAAAACTTCTTGATTCTCGTGAATTACAAAAGGTCCCTGGTAGAAGTTGGATCGAAGTACAAAGGAAGATCTATTCATTTACATCTGTTGATGAGTTTAACCCACAGGGAGAGCAGCTCCATGCCCTCTTAGTGAATTTGTCAAATGAGATGAAGCAAAGAGGATATACCCCACAAACTAAAGTAGTGCTATATGACCTTGATGAGGAAGAAAAGGAAAGGATTGTGTTGGGTCATAGTGAAAAGCTCGCAGTTGCTTTCGGACTCATCAATACAAGCAAGGGGGACACCATAAGGATAACTAAGAACTTGAGGCTATGTGAAGACTGCCATTCTGTCACAAAATTCATTTCCAAGTTTGCTGATCGAGAGATTATGGTTCGAGATGTTAATCGTTTCCACCATTTCAAGGATGGAGTTTGTTCCTGTGGAGATTATTGGTAG

mRNA sequence

ATGGTCAGTGTACTCCAAGCTTGTGCTGCTCTTGCTGCCCTGGAGCAAGGGAAGCTTATCCACGCTTACATTCTTAGGAGGGGTCTTGATTCAATCTTGCCAGTTATAAGTGCTCTTGTGACCATGTATGCAAGATGTGGTAAGCTTGAATTAGGCCAACTAGTTTTTGACCGTATGCATAAGAGAGATGTTGTCTTATGGAATTCCTTGATTTCGAGTTATGGAGTGCATGGATATGGAAGAAAAGCAATCGAAATTTTTGAAGAGATGATTGATCATGGAGTCTCACCTAGTTACATATCATTTGTAAGTGTTTTGGGTGCTTGCAGCCATGCTGGGCTTGTTGAAGAGGGTAAGGAGTTGTTTGAATCCATGGTAAAGGAACATGGTATACAGCCTAGTGTAGAGCACTATGCTTGTATGGTTGATCTTCTTGGGCGTGCTAACCGGTTGGATGAAGCAGCCAAGATTGTAGAAGATCTGCGTATTGAACCAGGGCCAAAAGTATGGGGTTCTCTTCTTGGTGCCTGTAGGATTCATTGTCATGTTGAGCTTGCCGAACGAGCAAGCAAAAGACTTTTTGAGCTTGAGCCTACGAATGCCGGGAATTATGTACTTCTAGCTGATATTTATGCAGAAGCTGAAATGTGGGATGAGGTAAAGAGAGTGAGAAAACTTCTTGATTCTCGTGAATTACAAAAGGTCCCTGGTAGAAGTTGGATCGAAGTACAAAGGAAGATCTATTCATTTACATCTGTTGATGAGTTTAACCCACAGGGAGAGCAGCTCCATGCCCTCTTAGTGAATTTGTCAAATGAGATGAAGCAAAGAGGATATACCCCACAAACTAAAGTAGTGCTATATGACCTTGATGAGGAAGAAAAGGAAAGGATTGTGTTGGGTCATAGTGAAAAGCTCGCAGTTGCTTTCGGACTCATCAATACAAGCAAGGGGGACACCATAAGGATAACTAAGAACTTGAGGCTATGTGAAGACTGCCATTCTGTCACAAAATTCATTTCCAAGTTTGCTGATCGAGAGATTATGGTTCGAGATGTTAATCGTTTCCACCATTTCAAGGATGGAGTTTGTTCCTGTGGAGATTATTGGTAG

Coding sequence (CDS)

ATGGTCAGTGTACTCCAAGCTTGTGCTGCTCTTGCTGCCCTGGAGCAAGGGAAGCTTATCCACGCTTACATTCTTAGGAGGGGTCTTGATTCAATCTTGCCAGTTATAAGTGCTCTTGTGACCATGTATGCAAGATGTGGTAAGCTTGAATTAGGCCAACTAGTTTTTGACCGTATGCATAAGAGAGATGTTGTCTTATGGAATTCCTTGATTTCGAGTTATGGAGTGCATGGATATGGAAGAAAAGCAATCGAAATTTTTGAAGAGATGATTGATCATGGAGTCTCACCTAGTTACATATCATTTGTAAGTGTTTTGGGTGCTTGCAGCCATGCTGGGCTTGTTGAAGAGGGTAAGGAGTTGTTTGAATCCATGGTAAAGGAACATGGTATACAGCCTAGTGTAGAGCACTATGCTTGTATGGTTGATCTTCTTGGGCGTGCTAACCGGTTGGATGAAGCAGCCAAGATTGTAGAAGATCTGCGTATTGAACCAGGGCCAAAAGTATGGGGTTCTCTTCTTGGTGCCTGTAGGATTCATTGTCATGTTGAGCTTGCCGAACGAGCAAGCAAAAGACTTTTTGAGCTTGAGCCTACGAATGCCGGGAATTATGTACTTCTAGCTGATATTTATGCAGAAGCTGAAATGTGGGATGAGGTAAAGAGAGTGAGAAAACTTCTTGATTCTCGTGAATTACAAAAGGTCCCTGGTAGAAGTTGGATCGAAGTACAAAGGAAGATCTATTCATTTACATCTGTTGATGAGTTTAACCCACAGGGAGAGCAGCTCCATGCCCTCTTAGTGAATTTGTCAAATGAGATGAAGCAAAGAGGATATACCCCACAAACTAAAGTAGTGCTATATGACCTTGATGAGGAAGAAAAGGAAAGGATTGTGTTGGGTCATAGTGAAAAGCTCGCAGTTGCTTTCGGACTCATCAATACAAGCAAGGGGGACACCATAAGGATAACTAAGAACTTGAGGCTATGTGAAGACTGCCATTCTGTCACAAAATTCATTTCCAAGTTTGCTGATCGAGAGATTATGGTTCGAGATGTTAATCGTTTCCACCATTTCAAGGATGGAGTTTGTTCCTGTGGAGATTATTGGTAG

Protein sequence

MVSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMHKRDVVLWNSLISSYGVHGYGRKAIEIFEEMIDHGVSPSYISFVSVLGACSHAGLVEEGKELFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSWIEVQRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVLGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGVCSCGDYW

Homology

[Close]

BLAST of HG10021891 vs. NCBI nr
Match: XP_038895613.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Benincasa hispida])

HSP 1 Score: 741.9 bits (1914), Expect = 2.7e-210
Identity = 365/370 (98.65%), Postives = 368/370 (99.46%), Query Frame = 0


Query: 1   MVSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMH 60
           MVSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLEL QLVFDRMH
Sbjct: 284 MVSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELSQLVFDRMH 343

Query: 61  KRDVVLWNSLISSYGVHGYGRKAIEIFEEMIDHGVSPSYISFVSVLGACSHAGLVEEGKE 120
           KRDVVLWNSLISSYGVHGYGRKAIEIFEEMID GVSPSYISFVSVLGACSHAGLVEEGK+
Sbjct: 344 KRDVVLWNSLISSYGVHGYGRKAIEIFEEMIDRGVSPSYISFVSVLGACSHAGLVEEGKK 403

Query: 121 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIH 180
           LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIH
Sbjct: 404 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIH 463

Query: 181 CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSW 240
           CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSW
Sbjct: 464 CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSW 523

Query: 241 IEVQRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVL 300
           IEV+RKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVL
Sbjct: 524 IEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVL 583

Query: 301 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFK 360
           GHSEK+AVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFK
Sbjct: 584 GHSEKIAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFK 643

Query: 361 DGVCSCGDYW 371
           DGVCSCGDYW
Sbjct: 644 DGVCSCGDYW 653

[Close]

BLAST of HG10021891 vs. NCBI nr
Match: XP_022141898.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Momordica charantia])

HSP 1 Score: 730.3 bits (1884), Expect = 8.1e-207
Identity = 358/370 (96.76%), Postives = 363/370 (98.11%), Query Frame = 0


Query: 1   MVSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMH 60
           MVSVLQACAALAALEQGKLIH YILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMH
Sbjct: 284 MVSVLQACAALAALEQGKLIHGYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMH 343

Query: 61  KRDVVLWNSLISSYGVHGYGRKAIEIFEEMIDHGVSPSYISFVSVLGACSHAGLVEEGKE 120
           KRDVVLWNSLIS YGVHGYGRKAIEIFEEMIDHG SPSYISFVSVLGACSHAGLVEEGKE
Sbjct: 344 KRDVVLWNSLISGYGVHGYGRKAIEIFEEMIDHGFSPSYISFVSVLGACSHAGLVEEGKE 403

Query: 121 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIH 180
           LFESMVKEHGI PSVEHYACMVDLLGRANRLDEAAKIVED+R+EPGPKVWGSLLGACRIH
Sbjct: 404 LFESMVKEHGIHPSVEHYACMVDLLGRANRLDEAAKIVEDMRLEPGPKVWGSLLGACRIH 463

Query: 181 CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSW 240
           CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWD+VKRV+KLLDSRELQKVPGRSW
Sbjct: 464 CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDKVKRVKKLLDSRELQKVPGRSW 523

Query: 241 IEVQRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVL 300
           IEV+RKIYSFTSVDEFNPQ EQLHALLVNLS EMKQRGY PQTKVVLYDLDEEEKERIVL
Sbjct: 524 IEVRRKIYSFTSVDEFNPQVEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVL 583

Query: 301 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFK 360
           GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFK
Sbjct: 584 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFK 643

Query: 361 DGVCSCGDYW 371
           DGVCSCGDYW
Sbjct: 644 DGVCSCGDYW 653

[Close]

BLAST of HG10021891 vs. NCBI nr
Match: XP_008457445.1 (PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Cucumis melo] >TYJ97374.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 728.4 bits (1879), Expect = 3.1e-206
Identity = 352/370 (95.14%), Postives = 367/370 (99.19%), Query Frame = 0


Query: 1   MVSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMH 60
           MVSVLQACAA AALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQ++FDR+H
Sbjct: 284 MVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQVIFDRIH 343

Query: 61  KRDVVLWNSLISSYGVHGYGRKAIEIFEEMIDHGVSPSYISFVSVLGACSHAGLVEEGKE 120
           K+DV+LWNSL SSYG+HGYGRKAIEIFEEMID+G+SPSYISFVSVLGACSHAGLVEEGK+
Sbjct: 344 KKDVILWNSLFSSYGLHGYGRKAIEIFEEMIDNGISPSYISFVSVLGACSHAGLVEEGKK 403

Query: 121 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIH 180
           LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKI+EDLRIEPGPKVWGSLLGACRIH
Sbjct: 404 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIH 463

Query: 181 CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSW 240
           CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLL+SRELQKVPGRSW
Sbjct: 464 CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLNSRELQKVPGRSW 523

Query: 241 IEVQRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVL 300
           IEV+RKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGY PQTK+VLYDLD+EEKERIVL
Sbjct: 524 IEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYVPQTKLVLYDLDQEEKERIVL 583

Query: 301 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFK 360
           GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRD+NRFHHFK
Sbjct: 584 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFK 643

Query: 361 DGVCSCGDYW 371
           DGVCSCGDYW
Sbjct: 644 DGVCSCGDYW 653

[Close]

BLAST of HG10021891 vs. NCBI nr
Match: KAA0067772.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 728.4 bits (1879), Expect = 3.1e-206
Identity = 352/370 (95.14%), Postives = 367/370 (99.19%), Query Frame = 0


Query: 1   MVSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMH 60
           MVSVLQACAA AALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQ++FDR+H
Sbjct: 284 MVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQVIFDRIH 343

Query: 61  KRDVVLWNSLISSYGVHGYGRKAIEIFEEMIDHGVSPSYISFVSVLGACSHAGLVEEGKE 120
           K+DV+LWNSL SSYG+HGYGRKAIEIFEEMID+G+SPSYISFVSVLGACSHAGLVEEGK+
Sbjct: 344 KKDVILWNSLFSSYGLHGYGRKAIEIFEEMIDNGISPSYISFVSVLGACSHAGLVEEGKK 403

Query: 121 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIH 180
           LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKI+EDLRIEPGPKVWGSLLGACRIH
Sbjct: 404 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIH 463

Query: 181 CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSW 240
           CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLL+SRELQKVPGRSW
Sbjct: 464 CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLNSRELQKVPGRSW 523

Query: 241 IEVQRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVL 300
           IEV+RKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGY PQTK+VLYDLD+EEKERIVL
Sbjct: 524 IEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYVPQTKLVLYDLDQEEKERIVL 583

Query: 301 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFK 360
           GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRD+NRFHHFK
Sbjct: 584 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFK 643

Query: 361 DGVCSCGDYW 371
           DGVCSCGDYW
Sbjct: 644 DGVCSCGDYW 653

[Close]

BLAST of HG10021891 vs. NCBI nr
Match: XP_031742497.1 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic, partial [Cucumis sativus])

HSP 1 Score: 727.2 bits (1876), Expect = 6.9e-206
Identity = 351/370 (94.86%), Postives = 366/370 (98.92%), Query Frame = 0


Query: 1   MVSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMH 60
           MVSVLQACAA AALEQGKLIHAYILRRGLDSILPVISAL+TMYARCGKLE GQL+FDRMH
Sbjct: 264 MVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMH 323

Query: 61  KRDVVLWNSLISSYGVHGYGRKAIEIFEEMIDHGVSPSYISFVSVLGACSHAGLVEEGKE 120
           K+DVVLWNSLISSYG+HGYGRKAI+IFEEMIDHG SPS+ISF+SVLGACSH GLVEEGK+
Sbjct: 324 KKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKK 383

Query: 121 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIH 180
           LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKI+EDLRIEPGPKVWGSLLGACRIH
Sbjct: 384 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIH 443

Query: 181 CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSW 240
           CHVELAERASKRLF+LEPTNAGNYVLLADIYAEAEMWDEVKRV+KLLDSRELQKVPGRSW
Sbjct: 444 CHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSW 503

Query: 241 IEVQRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVL 300
           IEV+RKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTK+VLYDLD+EEKERIVL
Sbjct: 504 IEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVL 563

Query: 301 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFK 360
           GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRD+NRFHHFK
Sbjct: 564 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFK 623

Query: 361 DGVCSCGDYW 371
           DGVCSCGDYW
Sbjct: 624 DGVCSCGDYW 633

[Close]

BLAST of HG10021891 vs. ExPASy Swiss-Prot
Match: Q9STF3 (Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CRR2 PE=2 SV=1)

HSP 1 Score: 623.6 bits (1607), Expect = 1.4e-177
Identity = 297/370 (80.27%), Postives = 337/370 (91.08%), Query Frame = 0


Query: 1   MVSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMH 60
           MVSVLQACA+LAALEQGKLIH YILRRGLDSILPVISALVTMY RCGKLE+GQ VFDRMH
Sbjct: 288 MVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMH 347

Query: 61  KRDVVLWNSLISSYGVHGYGRKAIEIFEEMIDHGVSPSYISFVSVLGACSHAGLVEEGKE 120
            RDVV WNSLISSYGVHGYG+KAI+IFEEM+ +G SP+ ++FVSVLGACSH GLVEEGK 
Sbjct: 348 DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKR 407

Query: 121 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIH 180
           LFE+M ++HGI+P +EHYACMVDLLGRANRLDEAAK+V+D+R EPGPKVWGSLLG+CRIH
Sbjct: 408 LFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIH 467

Query: 181 CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSW 240
            +VELAERAS+RLF LEP NAGNYVLLADIYAEA+MWDEVKRV+KLL+ R LQK+PGR W
Sbjct: 468 GNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCW 527

Query: 241 IEVQRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVL 300
           +EV+RK+YSF SVDEFNP  EQ+HA LV L+ +MK++GY PQTK VLY+L+ EEKERIVL
Sbjct: 528 MEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVL 587

Query: 301 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFK 360
           GHSEKLA+AFGLINTSKG+ IRITKNLRLCEDCH  TKFISKF ++EI+VRDVNRFH FK
Sbjct: 588 GHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFK 647

Query: 361 DGVCSCGDYW 371
           +GVCSCGDYW
Sbjct: 648 NGVCSCGDYW 657

[Close]

BLAST of HG10021891 vs. ExPASy Swiss-Prot
Match: Q9SUH6 (Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX=3702 GN=DYW9 PE=2 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 1.1e-108
Identity = 183/367 (49.86%), Postives = 259/367 (70.57%), Query Frame = 0


Query: 4   VLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMHKRD 63
           +L ACA L AL  GK +H  +     +S + V +AL+ MYA+CG +   + +FD M K++
Sbjct: 426 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485

Query: 64  VVLWNSLISSYGVHGYGRKAIEIFEEMIDHGVSPSYISFVSVLGACSHAGLVEEGKELFE 123
            V WN++IS YG+HG G++A+ IF EM++ G++P+ ++F+ VL ACSHAGLV+EG E+F 
Sbjct: 486 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 545

Query: 124 SMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHV 183
           SM+  +G +PSV+HYACMVD+LGRA  L  A + +E + IEPG  VW +LLGACRIH   
Sbjct: 546 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDT 605

Query: 184 ELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSWIEV 243
            LA   S++LFEL+P N G +VLL++I++    + +   VR+    R+L K PG + IE+
Sbjct: 606 NLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEI 665

Query: 244 QRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVLGHS 303
               + FTS D+ +PQ ++++  L  L  +M++ GY P+T++ L+D++EEE+E +V  HS
Sbjct: 666 GETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHS 725

Query: 304 EKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGV 363
           E+LA+AFGLI T  G  IRI KNLR+C DCH+VTK ISK  +R I+VRD NRFHHFKDGV
Sbjct: 726 ERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGV 785

Query: 364 CSCGDYW 371
           CSCGDYW
Sbjct: 786 CSCGDYW 792

[Close]

BLAST of HG10021891 vs. ExPASy Swiss-Prot
Match: Q7Y211 (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 388.3 bits (996), Expect = 9.9e-107
Identity = 179/371 (48.25%), Postives = 266/371 (71.70%), Query Frame = 0


Query: 1   MVSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMH 60
           ++++L +CAAL+AL +GK IHAY ++  L + + V SALV MYA+CG L++ + VFD++ 
Sbjct: 520 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579

Query: 61  KRDVVLWNSLISSYGVHGYGRKAIEIFEEMIDHGVSPSYISFVSVLGACSHAGLVEEGKE 120
           +++V+ WN +I +YG+HG G++AI++   M+  GV P+ ++F+SV  ACSH+G+V+EG  
Sbjct: 580 QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 639

Query: 121 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDL-RIEPGPKVWGSLLGACRI 180
           +F  M  ++G++PS +HYAC+VDLLGRA R+ EA +++  + R       W SLLGA RI
Sbjct: 640 IFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRI 699

Query: 181 HCHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRS 240
           H ++E+ E A++ L +LEP  A +YVLLA+IY+ A +WD+   VR+ +  + ++K PG S
Sbjct: 700 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 759

Query: 241 WIEVQRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIV 300
           WIE   +++ F + D  +PQ E+L   L  L   M++ GY P T  VL++++E+EKE ++
Sbjct: 760 WIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILL 819

Query: 301 LGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHF 360
            GHSEKLA+AFG++NTS G  IR+ KNLR+C DCH  TKFISK  DREI++RDV RFH F
Sbjct: 820 CGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRF 879

Query: 361 KDGVCSCGDYW 371
           K+G CSCGDYW
Sbjct: 880 KNGTCSCGDYW 890

[Close]

BLAST of HG10021891 vs. ExPASy Swiss-Prot
Match: Q9SN39 (Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DOT4 PE=2 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 1.7e-106
Identity = 182/367 (49.59%), Postives = 255/367 (69.48%), Query Frame = 0


Query: 4   VLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMHKRD 63
           VL ACA+L+A ++G+ IH YI+R G  S   V ++LV MYA+CG L L  ++FD +  +D
Sbjct: 505 VLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKD 564

Query: 64  VVLWNSLISSYGVHGYGRKAIEIFEEMIDHGVSPSYISFVSVLGACSHAGLVEEGKELFE 123
           +V W  +I+ YG+HG+G++AI +F +M   G+    ISFVS+L ACSH+GLV+EG   F 
Sbjct: 565 LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFN 624

Query: 124 SMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHV 183
            M  E  I+P+VEHYAC+VD+L R   L +A + +E++ I P   +WG+LL  CRIH  V
Sbjct: 625 IMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDV 684

Query: 184 ELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSWIEV 243
           +LAE+ ++++FELEP N G YVL+A+IYAEAE W++VKR+RK +  R L+K PG SWIE+
Sbjct: 685 KLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 744

Query: 244 QRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVLGHS 303
           + ++  F + D  NP+ E + A L  +   M + GY+P TK  L D +E EKE  + GHS
Sbjct: 745 KGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHS 804

Query: 304 EKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGV 363
           EKLA+A G+I++  G  IR+TKNLR+C DCH + KF+SK   REI++RD NRFH FKDG 
Sbjct: 805 EKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGH 864

Query: 364 CSCGDYW 371
           CSC  +W
Sbjct: 865 CSCRGFW 871

[Close]

BLAST of HG10021891 vs. ExPASy Swiss-Prot
Match: Q9LW32 (Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H34 PE=2 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 4.9e-106
Identity = 180/368 (48.91%), Postives = 254/368 (69.02%), Query Frame = 0


Query: 3   SVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMHKR 62
           +VL A +   AL  GK IH  ++R GL+  + V ++++ MY +CG++E  +  FDRM  +
Sbjct: 292 TVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNK 351

Query: 63  DVVLWNSLISSYGVHGYGRKAIEIFEEMIDHGVSPSYISFVSVLGACSHAGLVEEGKELF 122
           +V  W ++I+ YG+HG+  KA+E+F  MID GV P+YI+FVSVL ACSHAGL  EG   F
Sbjct: 352 NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWF 411

Query: 123 ESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCH 182
            +M    G++P +EHY CMVDLLGRA  L +A  +++ ++++P   +W SLL ACRIH +
Sbjct: 412 NAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKN 471

Query: 183 VELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSWIE 242
           VELAE +  RLFEL+ +N G Y+LL+ IYA+A  W +V+RVR ++ +R L K PG S +E
Sbjct: 472 VELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLE 531

Query: 243 VQRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVLGH 302
           +  +++ F   DE +PQ E+++  L  L+ ++ + GY   T  V +D+DEEEKE  +  H
Sbjct: 532 LNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVH 591

Query: 303 SEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDG 362
           SEKLA+AFG++NT  G T+ + KNLR+C DCH+V K ISK  DRE +VRD  RFHHFKDG
Sbjct: 592 SEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDG 651

Query: 363 VCSCGDYW 371
            CSCGDYW
Sbjct: 652 GCSCGDYW 659

[Close]

BLAST of HG10021891 vs. ExPASy TrEMBL
Match: A0A6J1CLW0 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111012148 PE=3 SV=1)

HSP 1 Score: 730.3 bits (1884), Expect = 3.9e-207
Identity = 358/370 (96.76%), Postives = 363/370 (98.11%), Query Frame = 0


Query: 1   MVSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMH 60
           MVSVLQACAALAALEQGKLIH YILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMH
Sbjct: 284 MVSVLQACAALAALEQGKLIHGYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMH 343

Query: 61  KRDVVLWNSLISSYGVHGYGRKAIEIFEEMIDHGVSPSYISFVSVLGACSHAGLVEEGKE 120
           KRDVVLWNSLIS YGVHGYGRKAIEIFEEMIDHG SPSYISFVSVLGACSHAGLVEEGKE
Sbjct: 344 KRDVVLWNSLISGYGVHGYGRKAIEIFEEMIDHGFSPSYISFVSVLGACSHAGLVEEGKE 403

Query: 121 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIH 180
           LFESMVKEHGI PSVEHYACMVDLLGRANRLDEAAKIVED+R+EPGPKVWGSLLGACRIH
Sbjct: 404 LFESMVKEHGIHPSVEHYACMVDLLGRANRLDEAAKIVEDMRLEPGPKVWGSLLGACRIH 463

Query: 181 CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSW 240
           CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWD+VKRV+KLLDSRELQKVPGRSW
Sbjct: 464 CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDKVKRVKKLLDSRELQKVPGRSW 523

Query: 241 IEVQRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVL 300
           IEV+RKIYSFTSVDEFNPQ EQLHALLVNLS EMKQRGY PQTKVVLYDLDEEEKERIVL
Sbjct: 524 IEVRRKIYSFTSVDEFNPQVEQLHALLVNLSKEMKQRGYIPQTKVVLYDLDEEEKERIVL 583

Query: 301 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFK 360
           GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFK
Sbjct: 584 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFK 643

Query: 361 DGVCSCGDYW 371
           DGVCSCGDYW
Sbjct: 644 DGVCSCGDYW 653

[Close]

BLAST of HG10021891 vs. ExPASy TrEMBL
Match: A0A5D3BEB8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001880 PE=3 SV=1)

HSP 1 Score: 728.4 bits (1879), Expect = 1.5e-206
Identity = 352/370 (95.14%), Postives = 367/370 (99.19%), Query Frame = 0


Query: 1   MVSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMH 60
           MVSVLQACAA AALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQ++FDR+H
Sbjct: 284 MVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQVIFDRIH 343

Query: 61  KRDVVLWNSLISSYGVHGYGRKAIEIFEEMIDHGVSPSYISFVSVLGACSHAGLVEEGKE 120
           K+DV+LWNSL SSYG+HGYGRKAIEIFEEMID+G+SPSYISFVSVLGACSHAGLVEEGK+
Sbjct: 344 KKDVILWNSLFSSYGLHGYGRKAIEIFEEMIDNGISPSYISFVSVLGACSHAGLVEEGKK 403

Query: 121 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIH 180
           LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKI+EDLRIEPGPKVWGSLLGACRIH
Sbjct: 404 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIH 463

Query: 181 CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSW 240
           CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLL+SRELQKVPGRSW
Sbjct: 464 CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLNSRELQKVPGRSW 523

Query: 241 IEVQRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVL 300
           IEV+RKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGY PQTK+VLYDLD+EEKERIVL
Sbjct: 524 IEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYVPQTKLVLYDLDQEEKERIVL 583

Query: 301 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFK 360
           GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRD+NRFHHFK
Sbjct: 584 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFK 643

Query: 361 DGVCSCGDYW 371
           DGVCSCGDYW
Sbjct: 644 DGVCSCGDYW 653

[Close]

BLAST of HG10021891 vs. ExPASy TrEMBL
Match: A0A5A7VHC3 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold352G00960 PE=3 SV=1)

HSP 1 Score: 728.4 bits (1879), Expect = 1.5e-206
Identity = 352/370 (95.14%), Postives = 367/370 (99.19%), Query Frame = 0


Query: 1   MVSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMH 60
           MVSVLQACAA AALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQ++FDR+H
Sbjct: 284 MVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQVIFDRIH 343

Query: 61  KRDVVLWNSLISSYGVHGYGRKAIEIFEEMIDHGVSPSYISFVSVLGACSHAGLVEEGKE 120
           K+DV+LWNSL SSYG+HGYGRKAIEIFEEMID+G+SPSYISFVSVLGACSHAGLVEEGK+
Sbjct: 344 KKDVILWNSLFSSYGLHGYGRKAIEIFEEMIDNGISPSYISFVSVLGACSHAGLVEEGKK 403

Query: 121 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIH 180
           LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKI+EDLRIEPGPKVWGSLLGACRIH
Sbjct: 404 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIH 463

Query: 181 CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSW 240
           CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLL+SRELQKVPGRSW
Sbjct: 464 CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLNSRELQKVPGRSW 523

Query: 241 IEVQRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVL 300
           IEV+RKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGY PQTK+VLYDLD+EEKERIVL
Sbjct: 524 IEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYVPQTKLVLYDLDQEEKERIVL 583

Query: 301 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFK 360
           GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRD+NRFHHFK
Sbjct: 584 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFK 643

Query: 361 DGVCSCGDYW 371
           DGVCSCGDYW
Sbjct: 644 DGVCSCGDYW 653

[Close]

BLAST of HG10021891 vs. ExPASy TrEMBL
Match: A0A1S3C5N6 (pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497132 PE=3 SV=1)

HSP 1 Score: 728.4 bits (1879), Expect = 1.5e-206
Identity = 352/370 (95.14%), Postives = 367/370 (99.19%), Query Frame = 0


Query: 1   MVSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMH 60
           MVSVLQACAA AALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQ++FDR+H
Sbjct: 284 MVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQVIFDRIH 343

Query: 61  KRDVVLWNSLISSYGVHGYGRKAIEIFEEMIDHGVSPSYISFVSVLGACSHAGLVEEGKE 120
           K+DV+LWNSL SSYG+HGYGRKAIEIFEEMID+G+SPSYISFVSVLGACSHAGLVEEGK+
Sbjct: 344 KKDVILWNSLFSSYGLHGYGRKAIEIFEEMIDNGISPSYISFVSVLGACSHAGLVEEGKK 403

Query: 121 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIH 180
           LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKI+EDLRIEPGPKVWGSLLGACRIH
Sbjct: 404 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIH 463

Query: 181 CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSW 240
           CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLL+SRELQKVPGRSW
Sbjct: 464 CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLNSRELQKVPGRSW 523

Query: 241 IEVQRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVL 300
           IEV+RKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGY PQTK+VLYDLD+EEKERIVL
Sbjct: 524 IEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYVPQTKLVLYDLDQEEKERIVL 583

Query: 301 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFK 360
           GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRD+NRFHHFK
Sbjct: 584 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFK 643

Query: 361 DGVCSCGDYW 371
           DGVCSCGDYW
Sbjct: 644 DGVCSCGDYW 653

[Close]

BLAST of HG10021891 vs. ExPASy TrEMBL
Match: A0A0A0LY40 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G524740 PE=3 SV=1)

HSP 1 Score: 727.2 bits (1876), Expect = 3.3e-206
Identity = 351/370 (94.86%), Postives = 366/370 (98.92%), Query Frame = 0


Query: 1   MVSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMH 60
           MVSVLQACAA AALEQGKLIHAYILRRGLDSILPVISAL+TMYARCGKLE GQL+FDRMH
Sbjct: 280 MVSVLQACAAFAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMH 339

Query: 61  KRDVVLWNSLISSYGVHGYGRKAIEIFEEMIDHGVSPSYISFVSVLGACSHAGLVEEGKE 120
           K+DVVLWNSLISSYG+HGYGRKAI+IFEEMIDHG SPS+ISF+SVLGACSH GLVEEGK+
Sbjct: 340 KKDVVLWNSLISSYGLHGYGRKAIKIFEEMIDHGFSPSHISFISVLGACSHTGLVEEGKK 399

Query: 121 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIH 180
           LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKI+EDLRIEPGPKVWGSLLGACRIH
Sbjct: 400 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDLRIEPGPKVWGSLLGACRIH 459

Query: 181 CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSW 240
           CHVELAERASKRLF+LEPTNAGNYVLLADIYAEAEMWDEVKRV+KLLDSRELQKVPGRSW
Sbjct: 460 CHVELAERASKRLFKLEPTNAGNYVLLADIYAEAEMWDEVKRVKKLLDSRELQKVPGRSW 519

Query: 241 IEVQRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVL 300
           IEV+RKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTK+VLYDLD+EEKERIVL
Sbjct: 520 IEVRRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKLVLYDLDQEEKERIVL 579

Query: 301 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFK 360
           GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRD+NRFHHFK
Sbjct: 580 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFK 639

Query: 361 DGVCSCGDYW 371
           DGVCSCGDYW
Sbjct: 640 DGVCSCGDYW 649

[Close]

BLAST of HG10021891 vs. TAIR 10
Match: AT3G46790.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 623.6 bits (1607), Expect = 1.0e-178
Identity = 297/370 (80.27%), Postives = 337/370 (91.08%), Query Frame = 0


Query: 1   MVSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMH 60
           MVSVLQACA+LAALEQGKLIH YILRRGLDSILPVISALVTMY RCGKLE+GQ VFDRMH
Sbjct: 288 MVSVLQACASLAALEQGKLIHGYILRRGLDSILPVISALVTMYGRCGKLEVGQRVFDRMH 347

Query: 61  KRDVVLWNSLISSYGVHGYGRKAIEIFEEMIDHGVSPSYISFVSVLGACSHAGLVEEGKE 120
            RDVV WNSLISSYGVHGYG+KAI+IFEEM+ +G SP+ ++FVSVLGACSH GLVEEGK 
Sbjct: 348 DRDVVSWNSLISSYGVHGYGKKAIQIFEEMLANGASPTPVTFVSVLGACSHEGLVEEGKR 407

Query: 121 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIH 180
           LFE+M ++HGI+P +EHYACMVDLLGRANRLDEAAK+V+D+R EPGPKVWGSLLG+CRIH
Sbjct: 408 LFETMWRDHGIKPQIEHYACMVDLLGRANRLDEAAKMVQDMRTEPGPKVWGSLLGSCRIH 467

Query: 181 CHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSW 240
            +VELAERAS+RLF LEP NAGNYVLLADIYAEA+MWDEVKRV+KLL+ R LQK+PGR W
Sbjct: 468 GNVELAERASRRLFALEPKNAGNYVLLADIYAEAQMWDEVKRVKKLLEHRGLQKLPGRCW 527

Query: 241 IEVQRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVL 300
           +EV+RK+YSF SVDEFNP  EQ+HA LV L+ +MK++GY PQTK VLY+L+ EEKERIVL
Sbjct: 528 MEVRRKMYSFVSVDEFNPLMEQIHAFLVKLAEDMKEKGYIPQTKGVLYELETEEKERIVL 587

Query: 301 GHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFK 360
           GHSEKLA+AFGLINTSKG+ IRITKNLRLCEDCH  TKFISKF ++EI+VRDVNRFH FK
Sbjct: 588 GHSEKLALAFGLINTSKGEPIRITKNLRLCEDCHLFTKFISKFMEKEILVRDVNRFHRFK 647

Query: 361 DGVCSCGDYW 371
           +GVCSCGDYW
Sbjct: 648 NGVCSCGDYW 657

[Close]

BLAST of HG10021891 vs. TAIR 10
Match: AT4G30700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 394.8 bits (1013), Expect = 7.5e-110
Identity = 183/367 (49.86%), Postives = 259/367 (70.57%), Query Frame = 0


Query: 4   VLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMHKRD 63
           +L ACA L AL  GK +H  +     +S + V +AL+ MYA+CG +   + +FD M K++
Sbjct: 426 ILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLMTKKN 485

Query: 64  VVLWNSLISSYGVHGYGRKAIEIFEEMIDHGVSPSYISFVSVLGACSHAGLVEEGKELFE 123
            V WN++IS YG+HG G++A+ IF EM++ G++P+ ++F+ VL ACSHAGLV+EG E+F 
Sbjct: 486 EVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEIFN 545

Query: 124 SMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHV 183
           SM+  +G +PSV+HYACMVD+LGRA  L  A + +E + IEPG  VW +LLGACRIH   
Sbjct: 546 SMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAMSIEPGSSVWETLLGACRIHKDT 605

Query: 184 ELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSWIEV 243
            LA   S++LFEL+P N G +VLL++I++    + +   VR+    R+L K PG + IE+
Sbjct: 606 NLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAATVRQTAKKRKLAKAPGYTLIEI 665

Query: 244 QRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVLGHS 303
               + FTS D+ +PQ ++++  L  L  +M++ GY P+T++ L+D++EEE+E +V  HS
Sbjct: 666 GETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQPETELALHDVEEEERELMVKVHS 725

Query: 304 EKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGV 363
           E+LA+AFGLI T  G  IRI KNLR+C DCH+VTK ISK  +R I+VRD NRFHHFKDGV
Sbjct: 726 ERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLISKITERVIVVRDANRFHHFKDGV 785

Query: 364 CSCGDYW 371
           CSCGDYW
Sbjct: 786 CSCGDYW 792

[Close]

BLAST of HG10021891 vs. TAIR 10
Match: AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 388.3 bits (996), Expect = 7.1e-108
Identity = 179/371 (48.25%), Postives = 266/371 (71.70%), Query Frame = 0


Query: 1   MVSVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMH 60
           ++++L +CAAL+AL +GK IHAY ++  L + + V SALV MYA+CG L++ + VFD++ 
Sbjct: 520 LMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIP 579

Query: 61  KRDVVLWNSLISSYGVHGYGRKAIEIFEEMIDHGVSPSYISFVSVLGACSHAGLVEEGKE 120
           +++V+ WN +I +YG+HG G++AI++   M+  GV P+ ++F+SV  ACSH+G+V+EG  
Sbjct: 580 QKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLR 639

Query: 121 LFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDL-RIEPGPKVWGSLLGACRI 180
           +F  M  ++G++PS +HYAC+VDLLGRA R+ EA +++  + R       W SLLGA RI
Sbjct: 640 IFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRI 699

Query: 181 HCHVELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRS 240
           H ++E+ E A++ L +LEP  A +YVLLA+IY+ A +WD+   VR+ +  + ++K PG S
Sbjct: 700 HNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCS 759

Query: 241 WIEVQRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIV 300
           WIE   +++ F + D  +PQ E+L   L  L   M++ GY P T  VL++++E+EKE ++
Sbjct: 760 WIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILL 819

Query: 301 LGHSEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHF 360
            GHSEKLA+AFG++NTS G  IR+ KNLR+C DCH  TKFISK  DREI++RDV RFH F
Sbjct: 820 CGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRF 879

Query: 361 KDGVCSCGDYW 371
           K+G CSCGDYW
Sbjct: 880 KNGTCSCGDYW 890

[Close]

BLAST of HG10021891 vs. TAIR 10
Match: AT4G18750.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 387.5 bits (994), Expect = 1.2e-107
Identity = 182/367 (49.59%), Postives = 255/367 (69.48%), Query Frame = 0


Query: 4   VLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMHKRD 63
           VL ACA+L+A ++G+ IH YI+R G  S   V ++LV MYA+CG L L  ++FD +  +D
Sbjct: 505 VLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKD 564

Query: 64  VVLWNSLISSYGVHGYGRKAIEIFEEMIDHGVSPSYISFVSVLGACSHAGLVEEGKELFE 123
           +V W  +I+ YG+HG+G++AI +F +M   G+    ISFVS+L ACSH+GLV+EG   F 
Sbjct: 565 LVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFN 624

Query: 124 SMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCHV 183
            M  E  I+P+VEHYAC+VD+L R   L +A + +E++ I P   +WG+LL  CRIH  V
Sbjct: 625 IMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDV 684

Query: 184 ELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSWIEV 243
           +LAE+ ++++FELEP N G YVL+A+IYAEAE W++VKR+RK +  R L+K PG SWIE+
Sbjct: 685 KLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEI 744

Query: 244 QRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVLGHS 303
           + ++  F + D  NP+ E + A L  +   M + GY+P TK  L D +E EKE  + GHS
Sbjct: 745 KGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHS 804

Query: 304 EKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDGV 363
           EKLA+A G+I++  G  IR+TKNLR+C DCH + KF+SK   REI++RD NRFH FKDG 
Sbjct: 805 EKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGH 864

Query: 364 CSCGDYW 371
           CSC  +W
Sbjct: 865 CSCRGFW 871

[Close]

BLAST of HG10021891 vs. TAIR 10
Match: AT3G26782.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 386.0 bits (990), Expect = 3.5e-107
Identity = 180/368 (48.91%), Postives = 254/368 (69.02%), Query Frame = 0


Query: 3   SVLQACAALAALEQGKLIHAYILRRGLDSILPVISALVTMYARCGKLELGQLVFDRMHKR 62
           +VL A +   AL  GK IH  ++R GL+  + V ++++ MY +CG++E  +  FDRM  +
Sbjct: 292 TVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNK 351

Query: 63  DVVLWNSLISSYGVHGYGRKAIEIFEEMIDHGVSPSYISFVSVLGACSHAGLVEEGKELF 122
           +V  W ++I+ YG+HG+  KA+E+F  MID GV P+YI+FVSVL ACSHAGL  EG   F
Sbjct: 352 NVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAGLHVEGWRWF 411

Query: 123 ESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIVEDLRIEPGPKVWGSLLGACRIHCH 182
            +M    G++P +EHY CMVDLLGRA  L +A  +++ ++++P   +W SLL ACRIH +
Sbjct: 412 NAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAACRIHKN 471

Query: 183 VELAERASKRLFELEPTNAGNYVLLADIYAEAEMWDEVKRVRKLLDSRELQKVPGRSWIE 242
           VELAE +  RLFEL+ +N G Y+LL+ IYA+A  W +V+RVR ++ +R L K PG S +E
Sbjct: 472 VELAEISVARLFELDSSNCGYYMLLSHIYADAGRWKDVERVRMIMKNRGLVKPPGFSLLE 531

Query: 243 VQRKIYSFTSVDEFNPQGEQLHALLVNLSNEMKQRGYTPQTKVVLYDLDEEEKERIVLGH 302
           +  +++ F   DE +PQ E+++  L  L+ ++ + GY   T  V +D+DEEEKE  +  H
Sbjct: 532 LNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEAGYVSNTSSVCHDVDEEEKEMTLRVH 591

Query: 303 SEKLAVAFGLINTSKGDTIRITKNLRLCEDCHSVTKFISKFADREIMVRDVNRFHHFKDG 362
           SEKLA+AFG++NT  G T+ + KNLR+C DCH+V K ISK  DRE +VRD  RFHHFKDG
Sbjct: 592 SEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVIKLISKIVDREFVVRDAKRFHHFKDG 651

Query: 363 VCSCGDYW 371
            CSCGDYW
Sbjct: 652 GCSCGDYW 659

The following BLAST results are available for this feature:

BLAST of HG10021891 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895613.1	2.7e-210	98.65	pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Benincasa ...	[more]
XP_022141898.1	8.1e-207	96.76	pentatricopeptide repeat-containing protein At3g46790, chloroplastic [Momordica ...	[more]
XP_008457445.1	3.1e-206	95.14	PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic ...	[more]
KAA0067772.1	3.1e-206	95.14	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_031742497.1	6.9e-206	94.86	pentatricopeptide repeat-containing protein At3g46790, chloroplastic, partial [C...	[more]

BLAST of HG10021891 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9STF3	1.4e-177	80.27	Pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Arabidop...	[more]
Q9SUH6	1.1e-108	49.86	Pentatricopeptide repeat-containing protein At4g30700 OS=Arabidopsis thaliana OX...	[more]
Q7Y211	9.9e-107	48.25	Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidop...	[more]
Q9SN39	1.7e-106	49.59	Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis t...	[more]
Q9LW32	4.9e-106	48.91	Pentatricopeptide repeat-containing protein At3g26782, mitochondrial OS=Arabidop...	[more]

BLAST of HG10021891 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CLW0	3.9e-207	96.76	pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Momordic...	[more]
A0A5D3BEB8	1.5e-206	95.14	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5A7VHC3	1.5e-206	95.14	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3C5N6	1.5e-206	95.14	pentatricopeptide repeat-containing protein At3g46790, chloroplastic OS=Cucumis ...	[more]
A0A0A0LY40	3.3e-206	94.86	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G5247...	[more]

BLAST of HG10021891 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G46790.1	1.0e-178	80.27	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G30700.1	7.5e-110	49.86	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G57430.1	7.1e-108	48.25	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G18750.1	1.2e-107	49.59	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G26782.1	3.5e-107	48.91	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bottle gourd (Hangzhou Gourd) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 1..116 e-value: 7.8E-22 score: 79.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 117..296 e-value: 2.0E-13 score: 52.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 33..221
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 101..134 e-value: 2.5E-5 score: 22.2 coord: 65..98 e-value: 9.4E-8 score: 29.8
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 62..109 e-value: 4.5E-9 score: 36.4
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 63..97 score: 12.495939
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 98..133 score: 9.097937
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 236..360 e-value: 1.2E-40 score: 138.3
None	No IPR available	PANTHER	PTHR24015:SF96	OS01G0848300 PROTEIN	coord: 1..360
None	No IPR available	PANTHER	PTHR24015	OS07G0578800 PROTEIN-RELATED	coord: 1..360

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
HG10021891.1	HG10021891.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031425	chloroplast RNA processing
biological_process	GO:0031426	polycistronic mRNA processing
biological_process	GO:0009451	RNA modification
cellular_component	GO:0043231	intracellular membrane-bounded organelle
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0008270	zinc ion binding